F289890

General Info

Members Datasets Scaffolds Average Seq Length
188 122 376 537

Family's Representative Sequence

Representative Sequence 3300046684|Ga0495669_0005704|Ga0495669_0005704_2980_4659
Length 524
Sequence MQPLDWAVVVAYLVWIVYDGLRRSKGTDKVDGYFLGNRTLPWWAIGLSVMATQMSAVTLVGTTGQAYLTGLRFVQFYFGLPLAMIILSMTAVPFFHRAKVYTAYEYLERRFDVRVRTLTSFLFLMGRAFSLGVTLTAPAVVMSAILGWPMPLTVLAICVPMIFYTTLGGVQAVAWTDVKQMGIIVSGMLAAVVVLILGIPHDVGVVQALHLAGATGRLKAVDFQFNLRETYTIWSGLIGGLFLMLAYFGCDQSQVQRYLTAKSEGEARDSLMMSAFVKIPLQLLVLSIGVLVFIFYLFQTPPMLFNRAYDSQVAAGPHAAEYADLERIAIVKDTTGDSRYTDVNYVFPTFITTHMPIGLVGLLIAAIFAAAMSASAGELNALATATIIDFYRRLFVKEAEDRHYLLVSKLATIGWGLFACVVAMYAANQGSLIEVVNRYGSFFYGSLLGVFMLAIVTRRATASGAFWGLIAGMAVVLTVAFSPWTRDIAFLWHNVIGAVVVVVVGLAVSAIETGQSAKGIGHRA

Samples

Sample ID Description Type Environment
1 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
83 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
86 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
87 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
88 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
89 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
90 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
91 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
92 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
93 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
94 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
95 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
96 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
97 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
98 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
99 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
100 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
101 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
102 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
103 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
104 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
105 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
106 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
107 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
108 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
109 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
110 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
111 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
112 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
113 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
116 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
117 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
118 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
119 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
120 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
121 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
122 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 5.85
Rhizosphere 94.15
Stem 0
Stem Tuber 0
Unclassified 1.06

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495669_0005704 3300046684 Bacteria 5191
2 Ga0065712_10003987 3300005290 Bacteria 6170
3 Ga0070683_100028474 3300005329 Bacteria 5049
4 Ga0070677_10013643 3300005333 Bacteria 2846
5 Ga0070660_100004068 3300005339 Bacteria 10092
6 Ga0070691_10000846 3300005341 Bacteria 12369
7 Ga0070661_100032150 3300005344 Bacteria 3797
8 Ga0070669_100006790 3300005353 Bacteria 8236
9 Ga0070669_100088476 3300005353 Bacteria 2318
10 Ga0070675_100000035 3300005354 Bacteria 86571
11 Ga0070674_100007518 3300005356 Bacteria 6432
12 Ga0070673_100070332 3300005364 Bacteria 2808
13 Ga0070673_100138060 3300005364 Bacteria 2054
14 Ga0070673_100142546 3300005364 Bacteria 2023
15 Ga0070688_100047274 3300005365 Bacteria 2669
16 Ga0070709_10076182 3300005434 Bacteria 2178
17 Ga0070713_100001511 3300005436 Bacteria 14811
18 Ga0070701_10048512 3300005438 Bacteria 2192
19 Ga0070700_100018647 3300005441 Bacteria 3992
20 Ga0070694_100005650 3300005444 Bacteria 7580
21 Ga0070694_100013707 3300005444 Bacteria 5066
22 Ga0070708_100028401 3300005445 Bacteria 4813
23 Ga0070708_100047683 3300005445 Bacteria 3785
24 Ga0070678_100057811 3300005456 Bacteria 2843
25 Ga0070662_100044334 3300005457 Bacteria 3185
26 Ga0070681_10003371 3300005458 Bacteria 14936
27 Ga0068867_100004261 3300005459 Bacteria 10064
28 Ga0068867_100055987 3300005459 Bacteria 2917
29 Ga0070707_100011328 3300005468 Bacteria 8311
30 Ga0070707_100048232 3300005468 Bacteria 4080
31 Ga0070698_100039387 3300005471 Bacteria 4865
32 Ga0070698_100089454 3300005471 Bacteria 3063
33 Ga0070698_100139218 3300005471 Bacteria 2380
34 Ga0070699_100000589 3300005518 Bacteria 34198
35 Ga0070679_100009967 3300005530 Bacteria 8993
36 Ga0070679_100124215 3300005530 Bacteria 2564
37 Ga0070697_100009337 3300005536 Bacteria 7668
38 Ga0070672_100119876 3300005543 Bacteria 2153
39 Ga0070695_100021829 3300005545 Bacteria 3922
40 Ga0070665_100005258 3300005548 Bacteria 13380
41 Ga0070704_100014190 3300005549 Bacteria 4970
42 Ga0070704_100020176 3300005549 Bacteria 4293
43 Ga0068855_100274350 3300005563 Bacteria 1874
44 Ga0068854_100003187 3300005578 Bacteria 10242
45 Ga0068854_100045517 3300005578 Bacteria 3121
46 Ga0070702_100017684 3300005615 Bacteria 3683
47 Ga0068859_100022183 3300005617 Bacteria 6365
48 Ga0068861_100017391 3300005719 Bacteria 5103
49 Ga0068861_100069792 3300005719 Bacteria 2719
50 Ga0068863_100000654 3300005841 Bacteria 35100
51 Ga0068858_100001859 3300005842 Bacteria 21533
52 Ga0068862_100005384 3300005844 Bacteria 10708
53 Ga0081455_10062435 3300005937 Bacteria 3131
54 Ga0097621_100005757 3300006237 Bacteria 8746
55 Ga0097621_100024699 3300006237 Bacteria 4696
56 Ga0097621_100111665 3300006237 Bacteria 2310
57 Ga0068871_100003202 3300006358 Bacteria 11227
58 Ga0068871_100003880 3300006358 Bacteria 10305
59 Ga0068871_100180215 3300006358 Bacteria 1815
60 Ga0075428_100217319 3300006844 Bacteria 2064
61 Ga0075433_10015034 3300006852 Bacteria 6336
62 Ga0075433_10165412 3300006852 Bacteria 1969
63 Ga0075434_100009613 3300006871 Bacteria 9030
64 Ga0075434_100071945 3300006871 Bacteria 3450
65 Ga0068865_100006947 3300006881 Bacteria 6941
66 Ga0097620_100022183 3300006931 Bacteria 6365
67 Ga0075435_100003188 3300007076 Bacteria 11100
68 Ga0075435_100014611 3300007076 Bacteria 5876
69 Ga0105240_10015012 3300009093 Bacteria 10546
70 Ga0111539_10095831 3300009094 Bacteria 3485
71 Ga0111539_10131981 3300009094 Bacteria 2925
72 Ga0111539_10188516 3300009094 Bacteria 2407
73 Ga0105245_10025500 3300009098 Bacteria 5199
74 Ga0105245_10037653 3300009098 Bacteria 4301
75 Ga0105245_10176148 3300009098 Bacteria 2040
76 Ga0105247_10017009 3300009101 Bacteria 4363
77 Ga0114129_10009374 3300009147 Bacteria 13956
78 Ga0114129_10010626 3300009147 Bacteria 13128
79 Ga0114129_10016767 3300009147 Bacteria 10429
80 Ga0114129_10016913 3300009147 Bacteria 10385
81 Ga0114129_10034892 3300009147 Bacteria 7106
82 Ga0114129_10047336 3300009147 Bacteria 6043
83 Ga0114129_10050114 3300009147 Bacteria 5866
84 Ga0114129_10105975 3300009147 Bacteria 3884
85 Ga0114129_10143172 3300009147 Bacteria 3276
86 Ga0105242_10008568 3300009176 Bacteria 7852
87 Ga0105248_10008065 3300009177 Bacteria 11562
88 Ga0105248_10009269 3300009177 Bacteria 10835
89 Ga0105248_10011180 3300009177 Bacteria 9901
90 Ga0105248_10048954 3300009177 Bacteria 4741
91 Ga0105248_10142649 3300009177 Bacteria 2702
92 Ga0157380_10080701 3300014326 Bacteria 2659
93 Ga0157380_10155173 3300014326 Bacteria 1983
94 Ga0157377_10016654 3300014745 Bacteria 3785
95 Ga0157379_10004341 3300014968 Bacteria 12128
96 Ga0157379_10178767 3300014968 Bacteria 1917
97 Ga0157376_10013898 3300014969 Bacteria 6020
98 Ga0207645_10001628 3300025907 Bacteria 18323
99 Ga0207645_10054802 3300025907 Bacteria 2547
100 Ga0207643_10106843 3300025908 Bacteria 1645
101 Ga0207707_10058403 3300025912 Bacteria 3357
102 Ga0207657_10040565 3300025919 Bacteria 4123
103 Ga0207652_10014341 3300025921 Bacteria 6418
104 Ga0207652_10131498 3300025921 Bacteria 2232
105 Ga0207646_10035903 3300025922 Bacteria 4475
106 Ga0207646_10147427 3300025922 Bacteria 2121
107 Ga0207681_10004571 3300025923 Bacteria 8507
108 Ga0207681_10057934 3300025923 Bacteria 2650
109 Ga0207681_10070925 3300025923 Bacteria 2428
110 Ga0207650_10135140 3300025925 Unclassified 1934
111 Ga0207659_10002714 3300025926 Bacteria 10552
112 Ga0207687_10106162 3300025927 Bacteria 2076
113 Ga0207706_10138421 3300025933 Bacteria 2141
114 Ga0207686_10043207 3300025934 Bacteria 2760
115 Ga0207704_10004236 3300025938 Bacteria 6555
116 Ga0207691_10048394 3300025940 Bacteria 3899
117 Ga0207711_10046692 3300025941 Bacteria 3701
118 Ga0207711_10098504 3300025941 Bacteria 2583
119 Ga0207679_10076807 3300025945 Bacteria 2539
120 Ga0207703_10033084 3300026035 Bacteria 4096
121 Ga0207703_10140500 3300026035 Bacteria 2095
122 Ga0207708_10023432 3300026075 Bacteria 4666
123 Ga0207641_10000693 3300026088 Bacteria 36308
124 Ga0207648_10004443 3300026089 Bacteria 14388
125 Ga0207648_10029745 3300026089 Bacteria 4844
126 Ga0207675_100007011 3300026118 Bacteria 10656
127 Ga0207675_100032239 3300026118 Bacteria 4882
128 Ga0207683_10021674 3300026121 Bacteria 5506
129 Ga0207683_10062565 3300026121 Bacteria 3278
130 Ga0207428_10028482 3300027907 Bacteria 4641
131 Ga0268266_10024028 3300028379 Bacteria 5186
132 Ga0268265_10004437 3300028380 Bacteria 9743
133 Ga0373950_0004305 3300034818 Bacteria 2080
134 Ga0373949_0002765 3300035090 Bacteria 4379
135 Ga0373951_0004015 3300035091 Bacteria 3524
136 Ga0373932_0001838 3300035112 Bacteria 5678
137 Ga0373936_0006622 3300035113 Bacteria 4363
138 Ga0373939_0001094 3300035114 Bacteria 6653
139 Ga0373960_0000149 3300035121 Bacteria 11782
140 Ga0373942_0001584 3300035207 Bacteria 5834
141 Ga0373962_0010113 3300035242 Bacteria 2346
142 Ga0373924_0001947 3300035410 Bacteria 6875
143 Ga0373935_0022872 3300035692 Bacteria 3837
144 Ga0495639_0052226 3300046475 Bacteria 1860
145 Ga0495618_0109495 3300046514 Bacteria 1769
146 Ga0495630_0003824 3300046517 Bacteria 10511
147 Ga0495652_0119941 3300046529 Bacteria 2099
148 Ga0495667_0008997 3300046559 Bacteria 6786
149 Ga0495647_0017825 3300046681 Bacteria 2518
150 Ga0495658_0068395 3300046683 Bacteria 2056
151 Ga0495613_0007903 3300046689 Bacteria 7912
152 Ga0495674_0141117 3300047319 Bacteria 2025
153 Ga0495684_0022660 3300047471 Bacteria 4830
154 Ga0495684_0052726 3300047471 Bacteria 3104
155 Ga0496100_0003326 3300048903 Bacteria 8371
156 Ga0496101_0001009 3300048904 Bacteria 16577
157 Ga0496102_0049115 3300048905 Bacteria 3838
158 Ga0496104_0009808 3300048907 Bacteria 8535
159 Ga0496104_0146114 3300048907 Bacteria 2271
160 Ga0496108_0001495 3300048911 Bacteria 18489
161 Ga0496112_0089342 3300048915 Bacteria 3049
162 Ga0496114_0003198 3300048917 Bacteria 12560
163 Ga0496114_0125212 3300048917 Bacteria 2215
164 Ga0496114_0193015 3300048917 Bacteria 1782
165 Ga0496114_0217416 3300048917 Bacteria 1677
166 Ga0501034_0008073 3300049571 Bacteria 11162
167 Ga0501047_0055108 3300049581 Bacteria 3845
168 Ga0501044_0003342 3300049823 Bacteria 18091
169 nmdc:mga05p37_10088_c1 3300050507 Bacteria 11210
170 nmdc:mga05p37_160426_c1 3300050507 Bacteria 2747
171 nmdc:mga05p37_25089_c1 3300050507 Bacteria 7248
172 nmdc:mga05p37_26038_c2 3300050507 Bacteria 4726
173 nmdc:mga05p37_288303_c1 3300050507 Bacteria 1955
174 nmdc:mga05p37_9830_c1 3300050507 Bacteria 11354
175 nmdc:mga08y16_11111_c1 3300050511 Bacteria 9455
176 nmdc:mga08y16_5818_c1 3300050511 Bacteria 12921
177 nmdc:mga0n895_82710_c1 3300050512 Bacteria 3201
178 nmdc:mga0n895_96238_c1 3300050512 Unclassified 2965
179 nmdc:mga0rr50_1155_c1 3300050513 Bacteria 14374
180 nmdc:mga0rr50_166881_c1 3300050513 Bacteria 1791
181 nmdc:mga0a205_116685_c1 3300050515 Bacteria 2568
182 nmdc:mga0a205_12090_c1 3300050515 Bacteria 7977
183 nmdc:mga0a205_175676_c1 3300050515 Bacteria 2037
184 nmdc:mga0a205_29786_c1 3300050515 Bacteria 5223
185 nmdc:mga0a205_68797_c1 3300050515 Bacteria 3419
186 nmdc:mga0a205_8242_c1 3300050515 Bacteria 9095
187 Ga0495595_0058220 3300053084 Bacteria 1804
188 Ga0495619_0021488 3300053085 Bacteria 4121
189 Ga0495669_0005704
190 Ga0065712_10003987
191 Ga0070683_100028474
192 Ga0070677_10013643
193 Ga0070660_100004068
194 Ga0070691_10000846
195 Ga0070661_100032150
196 Ga0070669_100006790
197 Ga0070669_100088476
198 Ga0070675_100000035
199 Ga0070674_100007518
200 Ga0070673_100070332
201 Ga0070673_100138060
202 Ga0070673_100142546
203 Ga0070688_100047274
204 Ga0070709_10076182
205 Ga0070713_100001511
206 Ga0070701_10048512
207 Ga0070700_100018647
208 Ga0070694_100005650
209 Ga0070694_100013707
210 Ga0070708_100028401
211 Ga0070708_100047683
212 Ga0070678_100057811
213 Ga0070662_100044334
214 Ga0070681_10003371
215 Ga0068867_100004261
216 Ga0068867_100055987
217 Ga0070707_100011328
218 Ga0070707_100048232
219 Ga0070698_100039387
220 Ga0070698_100089454
221 Ga0070698_100139218
222 Ga0070699_100000589
223 Ga0070679_100009967
224 Ga0070679_100124215
225 Ga0070697_100009337
226 Ga0070672_100119876
227 Ga0070695_100021829
228 Ga0070665_100005258
229 Ga0070704_100014190
230 Ga0070704_100020176
231 Ga0068855_100274350
232 Ga0068854_100003187
233 Ga0068854_100045517
234 Ga0070702_100017684
235 Ga0068859_100022183
236 Ga0068861_100017391
237 Ga0068861_100069792
238 Ga0068863_100000654
239 Ga0068858_100001859
240 Ga0068862_100005384
241 Ga0081455_10062435
242 Ga0097621_100005757
243 Ga0097621_100024699
244 Ga0097621_100111665
245 Ga0068871_100003202
246 Ga0068871_100003880
247 Ga0068871_100180215
248 Ga0075428_100217319
249 Ga0075433_10015034
250 Ga0075433_10165412
251 Ga0075434_100009613
252 Ga0075434_100071945
253 Ga0068865_100006947
254 Ga0097620_100022183
255 Ga0075435_100003188
256 Ga0075435_100014611
257 Ga0105240_10015012
258 Ga0111539_10095831
259 Ga0111539_10131981
260 Ga0111539_10188516
261 Ga0105245_10025500
262 Ga0105245_10037653
263 Ga0105245_10176148
264 Ga0105247_10017009
265 Ga0114129_10009374
266 Ga0114129_10010626
267 Ga0114129_10016767
268 Ga0114129_10016913
269 Ga0114129_10034892
270 Ga0114129_10047336
271 Ga0114129_10050114
272 Ga0114129_10105975
273 Ga0114129_10143172
274 Ga0105242_10008568
275 Ga0105248_10008065
276 Ga0105248_10009269
277 Ga0105248_10011180
278 Ga0105248_10048954
279 Ga0105248_10142649
280 Ga0157380_10080701
281 Ga0157380_10155173
282 Ga0157377_10016654
283 Ga0157379_10004341
284 Ga0157379_10178767
285 Ga0157376_10013898
286 Ga0207645_10001628
287 Ga0207645_10054802
288 Ga0207643_10106843
289 Ga0207707_10058403
290 Ga0207657_10040565
291 Ga0207652_10014341
292 Ga0207652_10131498
293 Ga0207646_10035903
294 Ga0207646_10147427
295 Ga0207681_10004571
296 Ga0207681_10057934
297 Ga0207681_10070925
298 Ga0207650_10135140
299 Ga0207659_10002714
300 Ga0207687_10106162
301 Ga0207706_10138421
302 Ga0207686_10043207
303 Ga0207704_10004236
304 Ga0207691_10048394
305 Ga0207711_10046692
306 Ga0207711_10098504
307 Ga0207679_10076807
308 Ga0207703_10033084
309 Ga0207703_10140500
310 Ga0207708_10023432
311 Ga0207641_10000693
312 Ga0207648_10004443
313 Ga0207648_10029745
314 Ga0207675_100007011
315 Ga0207675_100032239
316 Ga0207683_10021674
317 Ga0207683_10062565
318 Ga0207428_10028482
319 Ga0268266_10024028
320 Ga0268265_10004437
321 Ga0373950_0004305
322 Ga0373949_0002765
323 Ga0373951_0004015
324 Ga0373932_0001838
325 Ga0373936_0006622
326 Ga0373939_0001094
327 Ga0373960_0000149
328 Ga0373942_0001584
329 Ga0373962_0010113
330 Ga0373924_0001947
331 Ga0373935_0022872
332 Ga0495639_0052226
333 Ga0495618_0109495
334 Ga0495630_0003824
335 Ga0495652_0119941
336 Ga0495667_0008997
337 Ga0495647_0017825
338 Ga0495658_0068395
339 Ga0495613_0007903
340 Ga0495674_0141117
341 Ga0495684_0022660
342 Ga0495684_0052726
343 Ga0496100_0003326
344 Ga0496101_0001009
345 Ga0496102_0049115
346 Ga0496104_0009808
347 Ga0496104_0146114
348 Ga0496108_0001495
349 Ga0496112_0089342
350 Ga0496114_0003198
351 Ga0496114_0125212
352 Ga0496114_0193015
353 Ga0496114_0217416
354 Ga0501034_0008073
355 Ga0501047_0055108
356 Ga0501044_0003342
357 nmdc:mga05p37_10088_c1
358 nmdc:mga05p37_160426_c1
359 nmdc:mga05p37_25089_c1
360 nmdc:mga05p37_26038_c2
361 nmdc:mga05p37_288303_c1
362 nmdc:mga05p37_9830_c1
363 nmdc:mga08y16_11111_c1
364 nmdc:mga08y16_5818_c1
365 nmdc:mga0n895_82710_c1
366 nmdc:mga0n895_96238_c1
367 nmdc:mga0rr50_1155_c1
368 nmdc:mga0rr50_166881_c1
369 nmdc:mga0a205_116685_c1
370 nmdc:mga0a205_12090_c1
371 nmdc:mga0a205_175676_c1
372 nmdc:mga0a205_29786_c1
373 nmdc:mga0a205_68797_c1
374 nmdc:mga0a205_8242_c1
375 Ga0495595_0058220
376 Ga0495619_0021488

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00474

SSF

Sodium:solute symporter family

33

472

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
2xq2-assembly1.cif.gz_A structure of the k294a mutant of vsglt 0.8375 2 538
5nva-assembly1.cif.gz_A substrate-bound outward-open state of a na+-coupled sialic acid symporter reveals a novel na+-site 0.8314 2 536
2xq2-assembly1.cif.gz_B structure of the k294a mutant of vsglt 0.8149 30 538
5nva-assembly1.cif.gz_A substrate-bound outward-open state of a na+-coupled sialic acid symporter reveals a novel na+-site 0.8071 2 536
5nv9-assembly1.cif.gz_A substrate-bound outward-open state of a na+-coupled sialic acid symporter reveals a novel na+-site 0.806 2 536
ID Description Score Start End Superfamily
af_Q9V9U2_57_565_1.20.1730.10 Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter 0.884 31 516 1.20.1730.10
af_Q7K3Q2_41_585_1.20.1730.10 Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter 0.8516 39 516 1.20.1730.10
af_Q9VBK1_152_658_1.20.1730.10 Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter 0.8353 33 521 1.20.1730.10
af_Q9Y289_54_554_1.20.1730.10 Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter 0.8295 29 520 1.20.1730.10
af_Q9W3R0_60_567_1.20.1730.10 Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter 0.8227 38 517 1.20.1730.10
ID Description Score Start End GO Terms
AF-A0A7X7XE31-F1-model_v4 Sodium:solute symporter 0.9262 1 539 GO:0005886
GO:0006814
GO:0015293
AF-A0A7X7XE31-F1-model_v4 Sodium:solute symporter 0.9245 1 539 GO:0005886
GO:0006814
GO:0015293
AF-A0A2V8ECI0-F1-model_v4 Sodium:solute symporter 0.9191 76 539 GO:0005886
GO:0006814
GO:0015075
GO:0015293
GO:0098660
AF-A0A3D4M7J7-F1-model_v4 Sodium:solute symporter 0.9158 1 537 GO:0005886
GO:0006814
GO:0015293
AF-A0A1V2C5I0-F1-model_v4 Sodium:solute symporter 0.9127 1 536 GO:0005886
GO:0006814
GO:0015293

Map