F272517
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 178 | 123 | 178 | 229 |
Family's Representative Sequence
| Representative Sequence | 3300046455|Ga0495603_0001271|Ga0495603_0001271_7128_7844 |
| Length | 238 |
| Sequence | LAPHSPGTDQIDTLFWIGFVAATIAIVAINAGLIYALRRYRAGRDAEPPQETGGRRTQLRVGGVLTVFAAAIFVVSIVYTEKARETPATGPAGLQVSHSEPLRISATGQQWLWRYNYPDEQNEPGNTFSFYRLVVPVDTTVHLDLASTDVVHTWNVPELAGKRDAVPGKVNHVTFRADEEGTYDGQSATLSGQAYAAMRTEVEVVSPEQYKAFIEQQGRDIQAAQDHVVALIKNGEVP |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300002074 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 | Metagenome | Rhizosphere |
| 2 | 3300002239 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 | Metagenome | Rhizosphere |
| 3 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 4 | 3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 6 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 7 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 8 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Metagenome | Rhizosphere |
| 10 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 12 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 14 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 15 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 16 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 17 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 18 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 20 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 21 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 22 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 23 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 24 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 25 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 26 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 27 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 28 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 32 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 33 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 35 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 36 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 61 | 3300028654 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG | Metagenome | Rhizosphere |
| 62 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 63 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 64 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 65 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 66 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 67 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 68 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 69 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 70 | 3300046458 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300046461 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046515 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300047446 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 102 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 103 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 104 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 105 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 106 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 107 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 108 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 109 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 110 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 111 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 112 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 113 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 114 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 115 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 116 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 118 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 119 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300053123 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0.56 |
| Nodule | 0 |
| Rhizoplane | 15.73 |
| Rhizosphere | 83.15 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.56 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24748J21848_1000521 | 3300002074 | Bacteria | 4200 |
| 2 | JGI24034J26672_10000216 | 3300002239 | Bacteria | 7622 |
| 3 | Ga0070683_100074299 | 3300005329 | Bacteria | 3175 |
| 4 | Ga0070683_100119099 | 3300005329 | Bacteria | 2493 |
| 5 | Ga0070677_10000521 | 3300005333 | Bacteria | 13187 |
| 6 | Ga0068869_100032744 | 3300005334 | Bacteria | 3665 |
| 7 | Ga0070682_100000023 | 3300005337 | Bacteria | 206016 |
| 8 | Ga0070691_10000970 | 3300005341 | Bacteria | 11707 |
| 9 | Ga0070673_100005888 | 3300005364 | Bacteria | 7910 |
| 10 | Ga0070703_10034062 | 3300005406 | Unclassified | 1553 |
| 11 | Ga0070711_100039240 | 3300005439 | Bacteria | 3188 |
| 12 | Ga0070700_100024830 | 3300005441 | Bacteria | 3524 |
| 13 | Ga0070678_100007037 | 3300005456 | Bacteria | 6650 |
| 14 | Ga0070681_10282564 | 3300005458 | Bacteria | 1570 |
| 15 | Ga0068867_100000078 | 3300005459 | Bacteria | 59729 |
| 16 | Ga0070679_100000424 | 3300005530 | Bacteria | 35927 |
| 17 | Ga0068853_100034859 | 3300005539 | Bacteria | 4273 |
| 18 | Ga0070686_100022839 | 3300005544 | Bacteria | 3731 |
| 19 | Ga0070686_100435986 | 3300005544 | Bacteria | 1004 |
| 20 | Ga0070665_100000022 | 3300005548 | Bacteria | 379286 |
| 21 | Ga0070704_100399774 | 3300005549 | Bacteria | 1172 |
| 22 | Ga0068855_100334864 | 3300005563 | Bacteria | 1670 |
| 23 | Ga0068854_100311247 | 3300005578 | Bacteria | 1277 |
| 24 | Ga0068856_100005657 | 3300005614 | Bacteria | 12302 |
| 25 | Ga0068861_100407498 | 3300005719 | Bacteria | 1208 |
| 26 | Ga0068863_100000261 | 3300005841 | Bacteria | 55053 |
| 27 | Ga0068858_100000046 | 3300005842 | Bacteria | 127519 |
| 28 | Ga0068858_100001180 | 3300005842 | Bacteria | 27065 |
| 29 | Ga0097621_100265735 | 3300006237 | Bacteria | 1506 |
| 30 | Ga0075433_10000337 | 3300006852 | Bacteria | 29062 |
| 31 | Ga0075433_10013191 | 3300006852 | Bacteria | 6708 |
| 32 | Ga0105245_10000040 | 3300009098 | Bacteria | 144005 |
| 33 | Ga0105245_10000629 | 3300009098 | Bacteria | 32084 |
| 34 | Ga0105242_10045721 | 3300009176 | Unclassified | 3549 |
| 35 | Ga0105238_10000033 | 3300009551 | Bacteria | 172981 |
| 36 | Ga0105249_10000218 | 3300009553 | Bacteria | 65480 |
| 37 | Ga0157370_10004940 | 3300013104 | Bacteria | 15093 |
| 38 | Ga0157374_10001719 | 3300013296 | Bacteria | 18377 |
| 39 | Ga0157375_10000492 | 3300013308 | Bacteria | 35821 |
| 40 | Ga0157375_10150300 | 3300013308 | Bacteria | 2464 |
| 41 | Ga0157375_10309910 | 3300013308 | Bacteria | 1743 |
| 42 | Ga0157375_10564284 | 3300013308 | Unclassified | 1299 |
| 43 | Ga0163163_10260128 | 3300014325 | Bacteria | 1786 |
| 44 | Ga0163163_10535624 | 3300014325 | Unclassified | 1233 |
| 45 | Ga0163163_11242230 | 3300014325 | Unclassified | 807 |
| 46 | Ga0157380_10001343 | 3300014326 | Bacteria | 16023 |
| 47 | Ga0157379_10036873 | 3300014968 | Bacteria | 4360 |
| 48 | Ga0157379_10224409 | 3300014968 | Bacteria | 1703 |
| 49 | Ga0163161_10010899 | 3300017792 | Bacteria | 6303 |
| 50 | Ga0207682_10000769 | 3300025893 | Bacteria | 14799 |
| 51 | Ga0207707_10232194 | 3300025912 | Bacteria | 1605 |
| 52 | Ga0207663_10004985 | 3300025916 | Bacteria | 6655 |
| 53 | Ga0207660_10004388 | 3300025917 | Bacteria | 9200 |
| 54 | Ga0207681_10072507 | 3300025923 | Unclassified | 2406 |
| 55 | Ga0207694_10000012 | 3300025924 | Bacteria | 411218 |
| 56 | Ga0207687_10000046 | 3300025927 | Bacteria | 99576 |
| 57 | Ga0207687_10000095 | 3300025927 | Bacteria | 64664 |
| 58 | Ga0207689_10067843 | 3300025942 | Bacteria | 2931 |
| 59 | Ga0207661_10002170 | 3300025944 | Bacteria | 13522 |
| 60 | Ga0207661_10031493 | 3300025944 | Unclassified | 4098 |
| 61 | Ga0207651_10003288 | 3300025960 | Bacteria | 7914 |
| 62 | Ga0207712_10000027 | 3300025961 | Bacteria | 263739 |
| 63 | Ga0207640_10269622 | 3300025981 | Bacteria | 1331 |
| 64 | Ga0207703_10000020 | 3300026035 | Bacteria | 251603 |
| 65 | Ga0207703_10000042 | 3300026035 | Bacteria | 161459 |
| 66 | Ga0207639_10020073 | 3300026041 | Bacteria | 4779 |
| 67 | Ga0207708_10041507 | 3300026075 | Bacteria | 3507 |
| 68 | Ga0207702_10001788 | 3300026078 | Bacteria | 21174 |
| 69 | Ga0207641_10000062 | 3300026088 | Bacteria | 159982 |
| 70 | Ga0207648_10000457 | 3300026089 | Bacteria | 45386 |
| 71 | Ga0207675_100488184 | 3300026118 | Bacteria | 1225 |
| 72 | Ga0207683_10034311 | 3300026121 | Bacteria | 4409 |
| 73 | Ga0268266_10000029 | 3300028379 | Bacteria | 424015 |
| 74 | Ga0265319_1000010 | 3300028563 | Bacteria | 188773 |
| 75 | Ga0265322_10045170 | 3300028654 | Bacteria | 1254 |
| 76 | Ga0265338_10000287 | 3300028800 | Bacteria | 90818 |
| 77 | Ga0265331_10019519 | 3300031250 | Bacteria | 3501 |
| 78 | Ga0373937_0036836 | 3300036401 | Bacteria | 4457 |
| 79 | Ga0373937_0494577 | 3300036401 | Bacteria | 1162 |
| 80 | Ga0451853_2116351 | 3300041512 | Bacteria | 2800 |
| 81 | Ga0466963_0000233 | 3300044694 | Bacteria | 24036 |
| 82 | Ga0466967_1073608 | 3300045976 | Bacteria | 802 |
| 83 | Ga0495592_0000024 | 3300046454 | Bacteria | 136661 |
| 84 | Ga0495592_0080634 | 3300046454 | Bacteria | 2354 |
| 85 | Ga0495603_0000102 | 3300046455 | Bacteria | 40074 |
| 86 | Ga0495603_0001201 | 3300046455 | Bacteria | 15127 |
| 87 | Ga0495603_0001271 | 3300046455 | Bacteria | 14685 |
| 88 | Ga0495591_054471 | 3300046458 | Bacteria | 1081 |
| 89 | Ga0495629_0288658 | 3300046459 | Bacteria | 1125 |
| 90 | Ga0495629_0512496 | 3300046459 | Bacteria | 808 |
| 91 | Ga0495641_0000004 | 3300046461 | Bacteria | 210501 |
| 92 | Ga0495651_0325460 | 3300046462 | Unclassified | 1023 |
| 93 | Ga0495653_0063133 | 3300046463 | Bacteria | 2797 |
| 94 | Ga0495582_0000003 | 3300046473 | Bacteria | 168880 |
| 95 | Ga0495639_0156282 | 3300046475 | Unclassified | 1102 |
| 96 | Ga0495662_0001473 | 3300046476 | Bacteria | 11649 |
| 97 | Ga0495662_0231136 | 3300046476 | Bacteria | 912 |
| 98 | Ga0495618_0000267 | 3300046514 | Bacteria | 37924 |
| 99 | Ga0495620_0000041 | 3300046515 | Bacteria | 112605 |
| 100 | Ga0495628_0000794 | 3300046516 | Bacteria | 29108 |
| 101 | Ga0495628_0084302 | 3300046516 | Bacteria | 2466 |
| 102 | Ga0495630_0007095 | 3300046517 | Bacteria | 7981 |
| 103 | Ga0495630_0077801 | 3300046517 | Bacteria | 2501 |
| 104 | Ga0495652_0039107 | 3300046529 | Bacteria | 4103 |
| 105 | Ga0495586_0000254 | 3300046535 | Bacteria | 35015 |
| 106 | Ga0495587_0000272 | 3300046536 | Bacteria | 36939 |
| 107 | Ga0495587_0042813 | 3300046536 | Bacteria | 2698 |
| 108 | Ga0495645_0006138 | 3300046543 | Bacteria | 8316 |
| 109 | Ga0495645_0067939 | 3300046543 | Bacteria | 2573 |
| 110 | Ga0495667_0053729 | 3300046559 | Bacteria | 2652 |
| 111 | Ga0495634_0000002 | 3300046642 | Bacteria | 247842 |
| 112 | Ga0495634_0001691 | 3300046642 | Bacteria | 19214 |
| 113 | Ga0495635_0000005 | 3300046663 | Bacteria | 302178 |
| 114 | Ga0495599_0005867 | 3300046678 | Bacteria | 7377 |
| 115 | Ga0495599_0084184 | 3300046678 | Unclassified | 1986 |
| 116 | Ga0495647_0000005 | 3300046681 | Bacteria | 125996 |
| 117 | Ga0495647_0003950 | 3300046681 | Bacteria | 4782 |
| 118 | Ga0495658_0000001 | 3300046683 | Bacteria | 385362 |
| 119 | Ga0495669_0000483 | 3300046684 | Bacteria | 18439 |
| 120 | Ga0495669_0066948 | 3300046684 | Bacteria | 1632 |
| 121 | Ga0495613_0000027 | 3300046689 | Bacteria | 146674 |
| 122 | Ga0495613_0009561 | 3300046689 | Bacteria | 7202 |
| 123 | Ga0495613_0041216 | 3300046689 | Bacteria | 3420 |
| 124 | Ga0495624_0000123 | 3300046690 | Bacteria | 54291 |
| 125 | Ga0495624_0000691 | 3300046690 | Bacteria | 26457 |
| 126 | Ga0495600_0007613 | 3300046809 | Bacteria | 6634 |
| 127 | Ga0495600_0241898 | 3300046809 | Bacteria | 1150 |
| 128 | Ga0495604_0000100 | 3300047317 | Bacteria | 72995 |
| 129 | Ga0495604_0000723 | 3300047317 | Bacteria | 27948 |
| 130 | Ga0495676_0007903 | 3300047321 | Bacteria | 9752 |
| 131 | Ga0495676_0099405 | 3300047321 | Bacteria | 2156 |
| 132 | Ga0495680_0000007 | 3300047322 | Bacteria | 152053 |
| 133 | Ga0495680_0000929 | 3300047322 | Bacteria | 32526 |
| 134 | Ga0495679_006392 | 3300047446 | Bacteria | 5081 |
| 135 | Ga0495602_0000034 | 3300048088 | Bacteria | 140722 |
| 136 | Ga0496100_0000001 | 3300048903 | Bacteria | 530179 |
| 137 | Ga0496100_0000024 | 3300048903 | Bacteria | 116138 |
| 138 | Ga0496101_0000028 | 3300048904 | Bacteria | 198664 |
| 139 | Ga0496101_0000072 | 3300048904 | Bacteria | 116138 |
| 140 | Ga0496104_0000008 | 3300048907 | Bacteria | 516976 |
| 141 | Ga0496104_0159551 | 3300048907 | Bacteria | 2163 |
| 142 | Ga0496105_0000003 | 3300048908 | Bacteria | 713251 |
| 143 | Ga0496105_0008261 | 3300048908 | Bacteria | 8095 |
| 144 | Ga0496106_0000040 | 3300048909 | Bacteria | 108754 |
| 145 | Ga0496106_0000042 | 3300048909 | Bacteria | 106662 |
| 146 | Ga0496106_0000218 | 3300048909 | Bacteria | 40075 |
| 147 | Ga0496107_0000002 | 3300048910 | Bacteria | 320871 |
| 148 | Ga0496107_0000025 | 3300048910 | Bacteria | 116138 |
| 149 | Ga0496107_0683587 | 3300048910 | Unclassified | 755 |
| 150 | Ga0496108_0000004 | 3300048911 | Bacteria | 545055 |
| 151 | Ga0496108_0014805 | 3300048911 | Bacteria | 6364 |
| 152 | Ga0496108_0135254 | 3300048911 | Bacteria | 2120 |
| 153 | Ga0496109_0000013 | 3300048912 | Bacteria | 227469 |
| 154 | Ga0496109_0000378 | 3300048912 | Bacteria | 40469 |
| 155 | Ga0496110_0431816 | 3300048913 | Unclassified | 1200 |
| 156 | Ga0496111_0058288 | 3300048914 | Bacteria | 2796 |
| 157 | Ga0496112_0000026 | 3300048915 | Bacteria | 144758 |
| 158 | Ga0496113_0024269 | 3300048916 | Bacteria | 4307 |
| 159 | Ga0496113_0024909 | 3300048916 | Bacteria | 4260 |
| 160 | Ga0496113_0626947 | 3300048916 | Unclassified | 860 |
| 161 | Ga0496114_0000003 | 3300048917 | Bacteria | 630981 |
| 162 | Ga0496114_0012219 | 3300048917 | Bacteria | 6871 |
| 163 | Ga0496115_0000827 | 3300048918 | Bacteria | 22678 |
| 164 | Ga0501068_0102379 | 3300049584 | Bacteria | 1776 |
| 165 | Ga0501071_0513155 | 3300049587 | Bacteria | 920 |
| 166 | Ga0501044_0569021 | 3300049823 | Unclassified | 1029 |
| 167 | nmdc:mga0a205_16247_c1 | 3300050515 | Bacteria | 6970 |
| 168 | nmdc:mga0a205_4_c1 | 3300050515 | Bacteria | 168154 |
| 169 | Ga0495601_0000017 | 3300053077 | Bacteria | 204209 |
| 170 | Ga0495601_0000318 | 3300053077 | Bacteria | 25520 |
| 171 | Ga0495601_0060888 | 3300053077 | Bacteria | 2396 |
| 172 | Ga0495601_0126898 | 3300053077 | Bacteria | 1660 |
| 173 | Ga0495612_0005239 | 3300053078 | Bacteria | 5356 |
| 174 | Ga0495595_0000378 | 3300053084 | Bacteria | 16864 |
| 175 | Ga0495595_0012706 | 3300053084 | Bacteria | 3546 |
| 176 | Ga0495619_0000001 | 3300053085 | Bacteria | 586054 |
| 177 | Ga0495619_0408033 | 3300053085 | Bacteria | 938 |
| 178 | Ga0500614_000426 | 3300053123 | Bacteria | 10958 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300005458 | Ga0070681_10282564 | Ga0070681_102825642 | 205 |
| 2 | 3300005530 | Ga0070679_100000424 | Ga0070679_10000042418 | 205 |
| 3 | 3300005563 | Ga0068855_100334864 | Ga0068855_1003348642 | 205 |
| 4 | 3300009553 | Ga0105249_10000218 | Ga0105249_1000021834 | 205 |
| 5 | 3300025912 | Ga0207707_10232194 | Ga0207707_102321942 | 205 |
| 6 | 3300025917 | Ga0207660_10004388 | Ga0207660_100043883 | 205 |
| 7 | 3300025961 | Ga0207712_10000027 | Ga0207712_10000027227 | 205 |
| 8 | 3300005334 | Ga0068869_100032744 | Ga0068869_1000327443 | 207 |
| 9 | 3300014968 | Ga0157379_10036873 | Ga0157379_100368733 | 207 |
| 10 | 3300046459 | Ga0495629_0288658 | Ga0495629_0288658_390_1088 | 209 |
| 11 | 3300046535 | Ga0495586_0000254 | Ga0495586_0000254_11013_11711 | 210 |
| 12 | 3300046809 | Ga0495600_0007613 | Ga0495600_0007613_5911_6609 | 210 |
| 13 | 3300048914 | Ga0496111_0058288 | Ga0496111_0058288_14_889 | 212 |
| 14 | 3300046684 | Ga0495669_0066948 | Ga0495669_0066948_168_866 | 216 |
| 15 | 3300005544 | Ga0070686_100022839 | Ga0070686_1000228392 | 218 |
| 16 | 3300006237 | Ga0097621_100265735 | Ga0097621_1002657351 | 218 |
| 17 | 3300046454 | Ga0495592_0080634 | Ga0495592_0080634_1132_1788 | 218 |
| 18 | 3300046529 | Ga0495652_0039107 | Ga0495652_0039107_1127_1783 | 218 |
| 19 | 3300046543 | Ga0495645_0067939 | Ga0495645_0067939_755_1411 | 218 |
| 20 | 3300053077 | Ga0495601_0126898 | Ga0495601_0126898_624_1280 | 218 |
| 21 | 3300005539 | Ga0068853_100034859 | Ga0068853_1000348593 | 219 |
| 22 | 3300046455 | Ga0495603_0000102 | Ga0495603_0000102_20573_21232 | 219 |
| 23 | 3300046681 | Ga0495647_0000005 | Ga0495647_0000005_96880_97539 | 219 |
| 24 | 3300046690 | Ga0495624_0000123 | Ga0495624_0000123_13245_13904 | 219 |
| 25 | 3300046684 | Ga0495669_0000483 | Ga0495669_0000483_15058_15756 | 220 |
| 26 | 3300046689 | Ga0495613_0041216 | Ga0495613_0041216_2081_2779 | 221 |
| 27 | 3300047317 | Ga0495604_0000100 | Ga0495604_0000100_63652_64350 | 222 |
| 28 | 3300048911 | Ga0496108_0000004 | Ga0496108_0000004_472292_472990 | 224 |
| 29 | 3300048912 | Ga0496109_0000013 | Ga0496109_0000013_154733_155431 | 224 |
| 30 | 3300009098 | Ga0105245_10000040 | Ga0105245_1000004042 | 225 |
| 31 | 3300025927 | Ga0207687_10000046 | Ga0207687_1000004613 | 225 |
| 32 | 3300005341 | Ga0070691_10000970 | Ga0070691_100009707 | 226 |
| 33 | 3300046516 | Ga0495628_0000794 | Ga0495628_0000794_12273_12971 | 226 |
| 34 | 3300009551 | Ga0105238_10000033 | Ga0105238_10000033123 | 229 |
| 35 | 3300025924 | Ga0207694_10000012 | Ga0207694_10000012124 | 229 |
| 36 | 3300005329 | Ga0070683_100074299 | Ga0070683_1000742992 | 231 |
| 37 | 3300005406 | Ga0070703_10034062 | Ga0070703_100340621 | 231 |
| 38 | 3300005459 | Ga0068867_100000078 | Ga0068867_10000007842 | 231 |
| 39 | 3300025944 | Ga0207661_10002170 | Ga0207661_100021702 | 231 |
| 40 | 3300026089 | Ga0207648_10000457 | Ga0207648_100004574 | 231 |
| 41 | 3300002074 | JGI24748J21848_1000521 | JGI24748J21848_10005213 | 232 |
| 42 | 3300002239 | JGI24034J26672_10000216 | JGI24034J26672_100002167 | 232 |
| 43 | 3300005329 | Ga0070683_100119099 | Ga0070683_1001190992 | 232 |
| 44 | 3300005333 | Ga0070677_10000521 | Ga0070677_100005212 | 232 |
| 45 | 3300005337 | Ga0070682_100000023 | Ga0070682_100000023157 | 232 |
| 46 | 3300005364 | Ga0070673_100005888 | Ga0070673_1000058888 | 232 |
| 47 | 3300005439 | Ga0070711_100039240 | Ga0070711_1000392403 | 232 |
| 48 | 3300005441 | Ga0070700_100024830 | Ga0070700_1000248303 | 232 |
| 49 | 3300005456 | Ga0070678_100007037 | Ga0070678_1000070377 | 232 |
| 50 | 3300005544 | Ga0070686_100435986 | Ga0070686_1004359861 | 232 |
| 51 | 3300005548 | Ga0070665_100000022 | Ga0070665_10000002212 | 232 |
| 52 | 3300005549 | Ga0070704_100399774 | Ga0070704_1003997742 | 232 |
| 53 | 3300005578 | Ga0068854_100311247 | Ga0068854_1003112472 | 232 |
| 54 | 3300005614 | Ga0068856_100005657 | Ga0068856_1000056573 | 232 |
| 55 | 3300005719 | Ga0068861_100407498 | Ga0068861_1004074982 | 232 |
| 56 | 3300005841 | Ga0068863_100000261 | Ga0068863_10000026112 | 232 |
| 57 | 3300005842 | Ga0068858_100000046 | Ga0068858_10000004677 | 232 |
| 58 | 3300005842 | Ga0068858_100001180 | Ga0068858_10000118012 | 232 |
| 59 | 3300006852 | Ga0075433_10000337 | Ga0075433_100003377 | 232 |
| 60 | 3300006852 | Ga0075433_10013191 | Ga0075433_100131917 | 232 |
| 61 | 3300009098 | Ga0105245_10000629 | Ga0105245_1000062928 | 232 |
| 62 | 3300009176 | Ga0105242_10045721 | Ga0105242_100457213 | 232 |
| 63 | 3300013104 | Ga0157370_10004940 | Ga0157370_100049403 | 232 |
| 64 | 3300013296 | Ga0157374_10001719 | Ga0157374_1000171913 | 232 |
| 65 | 3300013308 | Ga0157375_10000492 | Ga0157375_1000049213 | 232 |
| 66 | 3300013308 | Ga0157375_10150300 | Ga0157375_101503002 | 232 |
| 67 | 3300013308 | Ga0157375_10309910 | Ga0157375_103099101 | 232 |
| 68 | 3300013308 | Ga0157375_10564284 | Ga0157375_105642842 | 232 |
| 69 | 3300014325 | Ga0163163_10260128 | Ga0163163_102601282 | 232 |
| 70 | 3300014325 | Ga0163163_10535624 | Ga0163163_105356242 | 232 |
| 71 | 3300014325 | Ga0163163_11242230 | Ga0163163_112422301 | 232 |
| 72 | 3300014326 | Ga0157380_10001343 | Ga0157380_100013439 | 232 |
| 73 | 3300014968 | Ga0157379_10224409 | Ga0157379_102244092 | 232 |
| 74 | 3300017792 | Ga0163161_10010899 | Ga0163161_100108995 | 232 |
| 75 | 3300025893 | Ga0207682_10000769 | Ga0207682_100007694 | 232 |
| 76 | 3300025916 | Ga0207663_10004985 | Ga0207663_100049853 | 232 |
| 77 | 3300025923 | Ga0207681_10072507 | Ga0207681_100725072 | 232 |
| 78 | 3300025927 | Ga0207687_10000095 | Ga0207687_1000009551 | 232 |
| 79 | 3300025942 | Ga0207689_10067843 | Ga0207689_100678433 | 232 |
| 80 | 3300025944 | Ga0207661_10031493 | Ga0207661_100314932 | 232 |
| 81 | 3300025960 | Ga0207651_10003288 | Ga0207651_100032883 | 232 |
| 82 | 3300025981 | Ga0207640_10269622 | Ga0207640_102696222 | 232 |
| 83 | 3300026035 | Ga0207703_10000020 | Ga0207703_1000002066 | 232 |
| 84 | 3300026035 | Ga0207703_10000042 | Ga0207703_1000004242 | 232 |
| 85 | 3300026041 | Ga0207639_10020073 | Ga0207639_100200733 | 232 |
| 86 | 3300026075 | Ga0207708_10041507 | Ga0207708_100415073 | 232 |
| 87 | 3300026078 | Ga0207702_10001788 | Ga0207702_1000178818 | 232 |
| 88 | 3300026088 | Ga0207641_10000062 | Ga0207641_10000062130 | 232 |
| 89 | 3300026118 | Ga0207675_100488184 | Ga0207675_1004881842 | 232 |
| 90 | 3300026121 | Ga0207683_10034311 | Ga0207683_100343113 | 232 |
| 91 | 3300028379 | Ga0268266_10000029 | Ga0268266_10000029437 | 232 |
| 92 | 3300028563 | Ga0265319_1000010 | Ga0265319_100001040 | 232 |
| 93 | 3300028654 | Ga0265322_10045170 | Ga0265322_100451701 | 232 |
| 94 | 3300028800 | Ga0265338_10000287 | Ga0265338_1000028769 | 232 |
| 95 | 3300031250 | Ga0265331_10019519 | Ga0265331_100195192 | 232 |
| 96 | 3300036401 | Ga0373937_0036836 | Ga0373937_0036836_2609_3307 | 232 |
| 97 | 3300036401 | Ga0373937_0494577 | Ga0373937_0494577_307_1005 | 232 |
| 98 | 3300041512 | Ga0451853_2116351 | Ga0451853_2116351_315_1013 | 232 |
| 99 | 3300044694 | Ga0466963_0000233 | Ga0466963_0000233_13054_13752 | 232 |
| 100 | 3300045976 | Ga0466967_1073608 | Ga0466967_1073608_36_734 | 232 |
| 101 | 3300046454 | Ga0495592_0000024 | Ga0495592_0000024_124407_125105 | 232 |
| 102 | 3300046455 | Ga0495603_0001201 | Ga0495603_0001201_9488_10186 | 232 |
| 103 | 3300046455 | Ga0495603_0001271 | Ga0495603_0001271_7128_7844 | 232 |
| 104 | 3300046458 | Ga0495591_054471 | Ga0495591_054471_342_1040 | 232 |
| 105 | 3300046459 | Ga0495629_0512496 | Ga0495629_0512496_74_772 | 232 |
| 106 | 3300046461 | Ga0495641_0000004 | Ga0495641_0000004_76260_76958 | 232 |
| 107 | 3300046462 | Ga0495651_0325460 | Ga0495651_0325460_172_870 | 232 |
| 108 | 3300046463 | Ga0495653_0063133 | Ga0495653_0063133_337_1035 | 232 |
| 109 | 3300046473 | Ga0495582_0000003 | Ga0495582_0000003_30936_31634 | 232 |
| 110 | 3300046475 | Ga0495639_0156282 | Ga0495639_0156282_176_874 | 232 |
| 111 | 3300046476 | Ga0495662_0001473 | Ga0495662_0001473_7599_8297 | 232 |
| 112 | 3300046476 | Ga0495662_0231136 | Ga0495662_0231136_67_765 | 232 |
| 113 | 3300046514 | Ga0495618_0000267 | Ga0495618_0000267_12693_13391 | 232 |
| 114 | 3300046515 | Ga0495620_0000041 | Ga0495620_0000041_43850_44548 | 232 |
| 115 | 3300046516 | Ga0495628_0084302 | Ga0495628_0084302_1238_1936 | 232 |
| 116 | 3300046517 | Ga0495630_0007095 | Ga0495630_0007095_3104_3802 | 232 |
| 117 | 3300046517 | Ga0495630_0077801 | Ga0495630_0077801_110_808 | 232 |
| 118 | 3300046536 | Ga0495587_0000272 | Ga0495587_0000272_9165_9863 | 232 |
| 119 | 3300046536 | Ga0495587_0042813 | Ga0495587_0042813_1610_2308 | 232 |
| 120 | 3300046543 | Ga0495645_0006138 | Ga0495645_0006138_3979_4677 | 232 |
| 121 | 3300046559 | Ga0495667_0053729 | Ga0495667_0053729_123_821 | 232 |
| 122 | 3300046642 | Ga0495634_0000002 | Ga0495634_0000002_125884_126582 | 232 |
| 123 | 3300046642 | Ga0495634_0001691 | Ga0495634_0001691_3335_4033 | 232 |
| 124 | 3300046663 | Ga0495635_0000005 | Ga0495635_0000005_28746_29444 | 232 |
| 125 | 3300046678 | Ga0495599_0005867 | Ga0495599_0005867_63_761 | 232 |
| 126 | 3300046678 | Ga0495599_0084184 | Ga0495599_0084184_212_910 | 232 |
| 127 | 3300046681 | Ga0495647_0003950 | Ga0495647_0003950_3303_4001 | 232 |
| 128 | 3300046683 | Ga0495658_0000001 | Ga0495658_0000001_140777_141475 | 232 |
| 129 | 3300046689 | Ga0495613_0000027 | Ga0495613_0000027_132664_133362 | 232 |
| 130 | 3300046689 | Ga0495613_0009561 | Ga0495613_0009561_3235_3933 | 232 |
| 131 | 3300046690 | Ga0495624_0000691 | Ga0495624_0000691_13767_14465 | 232 |
| 132 | 3300046809 | Ga0495600_0241898 | Ga0495600_0241898_93_791 | 232 |
| 133 | 3300047317 | Ga0495604_0000723 | Ga0495604_0000723_17850_18548 | 232 |
| 134 | 3300047321 | Ga0495676_0007903 | Ga0495676_0007903_5226_5924 | 232 |
| 135 | 3300047321 | Ga0495676_0099405 | Ga0495676_0099405_648_1346 | 232 |
| 136 | 3300047322 | Ga0495680_0000007 | Ga0495680_0000007_128375_129073 | 232 |
| 137 | 3300047322 | Ga0495680_0000929 | Ga0495680_0000929_19267_19965 | 232 |
| 138 | 3300047446 | Ga0495679_006392 | Ga0495679_006392_687_1385 | 232 |
| 139 | 3300048088 | Ga0495602_0000034 | Ga0495602_0000034_84362_85060 | 232 |
| 140 | 3300048903 | Ga0496100_0000001 | Ga0496100_0000001_83254_83952 | 232 |
| 141 | 3300048903 | Ga0496100_0000024 | Ga0496100_0000024_71999_72697 | 232 |
| 142 | 3300048904 | Ga0496101_0000028 | Ga0496101_0000028_83243_83941 | 232 |
| 143 | 3300048904 | Ga0496101_0000072 | Ga0496101_0000072_43442_44140 | 232 |
| 144 | 3300048907 | Ga0496104_0000008 | Ga0496104_0000008_122639_123337 | 232 |
| 145 | 3300048907 | Ga0496104_0159551 | Ga0496104_0159551_315_1013 | 232 |
| 146 | 3300048908 | Ga0496105_0000003 | Ga0496105_0000003_122639_123337 | 232 |
| 147 | 3300048908 | Ga0496105_0008261 | Ga0496105_0008261_2593_3294 | 232 |
| 148 | 3300048909 | Ga0496106_0000040 | Ga0496106_0000040_64615_65313 | 232 |
| 149 | 3300048909 | Ga0496106_0000042 | Ga0496106_0000042_54681_55379 | 232 |
| 150 | 3300048909 | Ga0496106_0000218 | Ga0496106_0000218_16257_16955 | 232 |
| 151 | 3300048910 | Ga0496107_0000002 | Ga0496107_0000002_164536_165234 | 232 |
| 152 | 3300048910 | Ga0496107_0000025 | Ga0496107_0000025_71999_72697 | 232 |
| 153 | 3300048910 | Ga0496107_0683587 | Ga0496107_0683587_21_719 | 232 |
| 154 | 3300048911 | Ga0496108_0014805 | Ga0496108_0014805_5457_6155 | 232 |
| 155 | 3300048911 | Ga0496108_0135254 | Ga0496108_0135254_964_1662 | 232 |
| 156 | 3300048912 | Ga0496109_0000378 | Ga0496109_0000378_30207_30905 | 232 |
| 157 | 3300048913 | Ga0496110_0431816 | Ga0496110_0431816_104_802 | 232 |
| 158 | 3300048915 | Ga0496112_0000026 | Ga0496112_0000026_25104_25802 | 232 |
| 159 | 3300048916 | Ga0496113_0024269 | Ga0496113_0024269_414_1112 | 232 |
| 160 | 3300048916 | Ga0496113_0024909 | Ga0496113_0024909_3374_4072 | 232 |
| 161 | 3300048916 | Ga0496113_0626947 | Ga0496113_0626947_59_757 | 232 |
| 162 | 3300048917 | Ga0496114_0000003 | Ga0496114_0000003_493504_494202 | 232 |
| 163 | 3300048917 | Ga0496114_0012219 | Ga0496114_0012219_441_1139 | 232 |
| 164 | 3300048918 | Ga0496115_0000827 | Ga0496115_0000827_2368_3066 | 232 |
| 165 | 3300049584 | Ga0501068_0102379 | Ga0501068_0102379_625_1323 | 232 |
| 166 | 3300049587 | Ga0501071_0513155 | Ga0501071_0513155_168_866 | 232 |
| 167 | 3300049823 | Ga0501044_0569021 | Ga0501044_0569021_194_892 | 232 |
| 168 | 3300050515 | nmdc:mga0a205_16247_c1 | nmdc:mga0a205_16247_c1_4444_5142 | 232 |
| 169 | 3300050515 | nmdc:mga0a205_4_c1 | nmdc:mga0a205_4_c1_129542_130240 | 232 |
| 170 | 3300053077 | Ga0495601_0000017 | Ga0495601_0000017_13422_14120 | 232 |
| 171 | 3300053077 | Ga0495601_0000318 | Ga0495601_0000318_21702_22400 | 232 |
| 172 | 3300053077 | Ga0495601_0060888 | Ga0495601_0060888_1388_2086 | 232 |
| 173 | 3300053078 | Ga0495612_0005239 | Ga0495612_0005239_3091_3789 | 232 |
| 174 | 3300053084 | Ga0495595_0000378 | Ga0495595_0000378_3480_4178 | 232 |
| 175 | 3300053084 | Ga0495595_0012706 | Ga0495595_0012706_2356_3054 | 232 |
| 176 | 3300053085 | Ga0495619_0000001 | Ga0495619_0000001_444427_445125 | 232 |
| 177 | 3300053085 | Ga0495619_0408033 | Ga0495619_0408033_102_800 | 232 |
| 178 | 3300053123 | Ga0500614_000426 | Ga0500614_000426_544_1242 | 232 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 8gym-assembly1.cif.gz_c2 | cryo-em structure of tetrahymena thermophila respiratory mega-complex mc iv2+(i+iii2+ii)2 | 0.8086 | 126 | 207 |
| 8bqs-assembly1.cif.gz_Db | cryo-em structure of the i-ii-iii2-iv2 respiratory supercomplex from tetrahymena thermophila | 0.8075 | 126 | 207 |
| 7w5z-assembly1.cif.gz_c2 | cryo-em structure of tetrahymena thermophila mitochondrial complex iv, composite dimer model | 0.8061 | 126 | 207 |
| 2qdp-assembly1.cif.gz_A | crystal structure of the heptp catalytic domain c270s mutant crystallized in ammonium acetate | 0.7725 | 176 | 198 |
| 4w9z-assembly1.cif.gz_A | crystal structure of the periplasmic domain of subunit ii of cytochrome oxidase (coxb) of bradyrhizobium japonicum | 0.7654 | 99 | 214 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 5wehH02 | Mainly Beta;Sandwich;Immunoglobulin-like;Cupredoxins - | 0.8659 | 126 | 209 | 2.60.40.420 |
| af_A0A1D6ED90_406_498_2.60.40.420 | Mainly Beta;Sandwich;Immunoglobulin-like;Cupredoxins - | 0.8612 | 126 | 207 | 2.60.40.420 |
| af_Q8I6V2_60_165_2.60.40.420 | Mainly Beta;Sandwich;Immunoglobulin-like;Cupredoxins - | 0.8523 | 126 | 206 | 2.60.40.420 |
| af_P49445_57_357_3.90.190.10 | Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Protein tyrosine phosphatase superfamily | 0.786 | 176 | 198 | 3.90.190.10 |
| af_P9WP69_149_325_2.60.40.420 | Mainly Beta;Sandwich;Immunoglobulin-like;Cupredoxins - | 0.7837 | 126 | 210 | 2.60.40.420 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A257QE24-F1-model_v4 | cytochrome-c oxidase (EC 7.1.1.9) | 0.8815 | 126 | 218 |
GO:0004129
GO:0005507 GO:0016020 GO:0020037 GO:0042597 GO:0042773 |
| AF-A0A3B9L777-F1-model_v4 | Cytochrome c oxidase subunit II | 0.8773 | 126 | 218 |
GO:0004129
GO:0005507 GO:0016020 GO:0020037 GO:0042773 |
| AF-G9IT60-F1-model_v4 | cytochrome-c oxidase (EC 7.1.1.9) (Cytochrome c oxidase polypeptide II) | 0.87 | 126 | 213 |
GO:0004129
GO:0005507 GO:0005739 GO:0016020 GO:0042773 |
| AF-A0A1U9XPK0-F1-model_v4 | Cytochrome c oxidase subunit 2 | 0.8682 | 126 | 216 |
GO:0004129
GO:0005507 GO:0005743 GO:0042773 |
| AF-A0A8A5SUA7-F1-model_v4 | cytochrome-c oxidase (EC 7.1.1.9) (Cytochrome c oxidase polypeptide II) | 0.8663 | 126 | 214 |
GO:0004129
GO:0005507 GO:0031966 GO:0042773 |
Predicted Structure (AlphaFold2)
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