F269936

General Info

Members Datasets Scaffolds Average Seq Length
177 131 354 967

Family's Representative Sequence

Representative Sequence 3300006028|Ga0070717_10006602|Ga0070717_100066026
Length 1044
Sequence MHRASSKDSRNTSVGWPSSKLQRWPALVTTGTMRSDPYCTYRFAPQVVPHSRLASFAFALALWILAAQSLAGQVSPNKQYFTLHTQHFYIHFTRETEPTARRVAADAERAYAQLASELHPPRGPIDVVISDDVDFSNGSATPFPTNRIVVYANPPIQSSSLRFTDDWGAMVITHELTHIFHLDRTRGLWLVGQYIFGRSPYLFPNEYSPSWLTEGLAVYYESRFTGAGRIEGSEHRMIARASAIDHSFPALSEASLASPRFPFGEAAYAYGSLFVDYLAKTRGEAAVRRFIDKSSADIIPYLIDIPARQGFGISFTKAYREWRDSIFRSVAGFNPSTTPLPAWHDLTREGVLVSSPRWMSDSTLAYTGTSGREVYAAWSVDLSGRRSRIGRRNSESPQLRLPDGSLLFAQLEYTSPYEVRSDFFVQRNGHEHRLTRGARLSLPDVRADGEIVAVQTIPGATRLVRVSPDGRRVVPITNGGLDEEWNEPRWSHRGDRIAAIRWRYGGTSEVVVIDSAGHEQFAFASGHSVQATPAWTADDGSIIYTSDRTGTAQIYLTSVADRRETRLSDAPAGLFEPQLRTAVGALSSLTASNQPTSEISIAAVALRGDGYHLGVAPCCQLASATPSVVQSGAAVPTIAIDSSPALPYSPWRQLVPRYWVPSYSQGMFPNRPRIGVESGSYDIIGRHAWDAKVNLPTDNSGITGDFAYSYAGLGLPVIDALLSRDWSWLGNIVDQTPQHNKVGDVRRRIDDGEIDASWIRQRYRSAFAVTAGTGVEQYQYVGVPDGVLALIDSTGIFRSRFYPRVLLGARYAKTQAAPNSISPEDGFTVAATARERWRTDIANSATLSVVSAATAYKSLDLPGFAHHVLALRGAAGWRDDRATGYFEVGGVSGTPVPIIADYTVGEGARDFGVRGFYPSSLLGTRAIAASAEYRLPLVMPGRGLGTLPFFVQRSSLTVFSDYGSAWCPGVLTSLVCTQSVEDQYRLTEHRWLGSYGAELNINAAVFSWDAPYRFRFGVAVPYHDDGLLFAAKTVTWYFTSGLSF

Samples

Sample ID Description Type Environment
1 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
32 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
33 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
34 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
41 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
42 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
43 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
44 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
45 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
46 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
47 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
48 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
49 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
80 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
81 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
82 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
83 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
84 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
85 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
86 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
87 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
88 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
89 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
90 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
91 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
92 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
93 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
94 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
95 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
96 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
97 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
98 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
99 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
100 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
101 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
102 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
103 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
104 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
105 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
106 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
107 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
108 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
109 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
110 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
111 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
112 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
113 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
114 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
115 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
116 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
117 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
118 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
119 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
120 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
121 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
122 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
123 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
124 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
125 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
126 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
129 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
130 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
131 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.56
Rhizosphere 98.31
Stem 0
Stem Tuber 0
Unclassified 9.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070717_10006602 3300006028 Bacteria 8541
2 Ga0070658_10023111 3300005327 Bacteria 4991
3 Ga0070683_100001853 3300005329 Bacteria 16509
4 Ga0070683_100018898 3300005329 Bacteria 6114
5 Ga0070683_100047349 3300005329 Bacteria 3972
6 Ga0070690_100011986 3300005330 Bacteria 5087
7 Ga0070670_100001789 3300005331 Bacteria 17498
8 Ga0068869_100002203 3300005334 Bacteria 11724
9 Ga0070680_100000188 3300005336 Bacteria 39858
10 Ga0070680_100002343 3300005336 Bacteria 13997
11 Ga0070680_100014009 3300005336 Bacteria 6260
12 Ga0070682_100000425 3300005337 Bacteria 27344
13 Ga0068868_100006371 3300005338 Bacteria 8347
14 Ga0070687_100009810 3300005343 Bacteria 4112
15 Ga0070668_100020707 3300005347 Bacteria 4966
16 Ga0070675_100003782 3300005354 Bacteria 11494
17 Ga0070675_100024448 3300005354 Bacteria 4837
18 Ga0070659_100001191 3300005366 Bacteria 18942
19 Ga0070709_10004506 3300005434 Bacteria 7515
20 Ga0070709_10019888 3300005434 Bacteria 3890
21 Ga0070714_100049116 3300005435 Bacteria 3591
22 Ga0070708_100000320 3300005445 Bacteria 36152
23 Ga0070663_100014197 3300005455 Bacteria 5107
24 Ga0070681_10000831 3300005458 Bacteria 25804
25 Ga0070681_10004377 3300005458 Bacteria 13440
26 Ga0070681_10011235 3300005458 Bacteria 8857
27 Ga0070681_10017690 3300005458 Bacteria 7124
28 Ga0070681_10022552 3300005458 Bacteria 6323
29 Ga0070681_10025264 3300005458 Bacteria 5974
30 Ga0070681_10037516 3300005458 Bacteria 4862
31 Ga0070681_10038556 3300005458 Unclassified 4791
32 Ga0070681_10042839 3300005458 Bacteria 4535
33 Ga0070706_100047012 3300005467 Unclassified 3982
34 Ga0070707_100001908 3300005468 Bacteria 19981
35 Ga0070679_100000546 3300005530 Bacteria 31896
36 Ga0070679_100001548 3300005530 Bacteria 20543
37 Ga0070679_100003071 3300005530 Bacteria 15264
38 Ga0070679_100003759 3300005530 Bacteria 13924
39 Ga0070679_100005122 3300005530 Bacteria 12112
40 Ga0070679_100008956 3300005530 Bacteria 9443
41 Ga0070679_100010018 3300005530 Bacteria 8975
42 Ga0070679_100016621 3300005530 Bacteria 7106
43 Ga0070679_100036743 3300005530 Bacteria 4861
44 Ga0070684_100000095 3300005535 Bacteria 56979
45 Ga0070684_100016903 3300005535 Bacteria 5975
46 Ga0070695_100019931 3300005545 Archaea 4090
47 Ga0070693_100000329 3300005547 Bacteria 21763
48 Ga0070693_100001842 3300005547 Bacteria 9690
49 Ga0070693_100006617 3300005547 Bacteria 5626
50 Ga0070664_100012295 3300005564 Bacteria 6956
51 Ga0068857_100023612 3300005577 Bacteria 5414
52 Ga0068852_100031294 3300005616 Archaea 4389
53 Ga0068864_100004303 3300005618 Bacteria 11706
54 Ga0068860_100016238 3300005843 Bacteria 7258
55 Ga0081539_10000327 3300005985 Bacteria 106205
56 Ga0081539_10019953 3300005985 Bacteria 4560
57 Ga0068871_100055445 3300006358 Bacteria 3217
58 Ga0068865_100001520 3300006881 Bacteria 13526
59 Ga0075436_100001907 3300006914 Bacteria 14321
60 Ga0105245_10006094 3300009098 Bacteria 10600
61 Ga0105245_10014786 3300009098 Bacteria 6797
62 Ga0105245_10017575 3300009098 Bacteria 6243
63 Ga0114129_10045156 3300009147 Bacteria 6194
64 Ga0105241_10001480 3300009174 Bacteria 17988
65 Ga0105241_10017918 3300009174 Bacteria 5207
66 Ga0105248_10014618 3300009177 Bacteria 8637
67 Ga0105248_10048810 3300009177 Unclassified 4748
68 Ga0105238_10035994 3300009551 Bacteria 5032
69 Ga0105246_10003884 3300011119 Bacteria 9054
70 Ga0157373_10059524 3300013100 Unclassified 2707
71 Ga0157371_10009157 3300013102 Bacteria 7819
72 Ga0157371_10015401 3300013102 Bacteria 5737
73 Ga0157374_10015007 3300013296 Bacteria 6790
74 Ga0157378_10007720 3300013297 Bacteria 9387
75 Ga0157372_10001535 3300013307 Bacteria 25115
76 Ga0157372_10004125 3300013307 Bacteria 15564
77 Ga0157372_10029146 3300013307 Bacteria 6024
78 Ga0157372_10031433 3300013307 Bacteria 5813
79 Ga0157375_10006445 3300013308 Bacteria 10222
80 Ga0157375_10056141 3300013308 Unclassified 3886
81 Ga0182008_10007413 3300014497 Bacteria 6059
82 Ga0157377_10001548 3300014745 Bacteria 10002
83 Ga0213876_10005867 3300021384 Bacteria 6722
84 Ga0207699_10009208 3300025906 Bacteria 4904
85 Ga0207645_10012247 3300025907 Bacteria 5825
86 Ga0207643_10012742 3300025908 Unclassified 4545
87 Ga0207654_10003597 3300025911 Bacteria 7833
88 Ga0207654_10007182 3300025911 Bacteria 5610
89 Ga0207707_10012774 3300025912 Bacteria 7305
90 Ga0207695_10012503 3300025913 Bacteria 10183
91 Ga0207660_10001167 3300025917 Bacteria 17554
92 Ga0207662_10011131 3300025918 Bacteria 4977
93 Ga0207657_10010834 3300025919 Bacteria 9072
94 Ga0207657_10015952 3300025919 Bacteria 7258
95 Ga0207657_10016661 3300025919 Bacteria 7081
96 Ga0207649_10001738 3300025920 Bacteria 12504
97 Ga0207649_10003194 3300025920 Bacteria 8983
98 Ga0207652_10001349 3300025921 Bacteria 21807
99 Ga0207652_10002290 3300025921 Bacteria 16239
100 Ga0207646_10001245 3300025922 Bacteria 31904
101 Ga0207664_10040765 3300025929 Bacteria 3614
102 Ga0207690_10010264 3300025932 Bacteria 5562
103 Ga0207706_10000649 3300025933 Bacteria 36724
104 Ga0207686_10021682 3300025934 Bacteria 3691
105 Ga0207665_10000337 3300025939 Bacteria 32435
106 Ga0207711_10011309 3300025941 Bacteria 7415
107 Ga0207689_10006099 3300025942 Bacteria 10661
108 Ga0207661_10000857 3300025944 Bacteria 19956
109 Ga0207661_10024173 3300025944 Unclassified 4601
110 Ga0207661_10036748 3300025944 Bacteria 3826
111 Ga0207679_10021765 3300025945 Bacteria 4354
112 Ga0207679_10023365 3300025945 Bacteria 4226
113 Ga0207667_10021808 3300025949 Bacteria 7089
114 Ga0207667_10039698 3300025949 Bacteria 5015
115 Ga0207712_10000127 3300025961 Bacteria 80901
116 Ga0207668_10007554 3300025972 Bacteria 6469
117 Ga0207677_10009859 3300026023 Bacteria 5385
118 Ga0207678_10001494 3300026067 Bacteria 21427
119 Ga0207708_10007325 3300026075 Bacteria 8152
120 Ga0207702_10028259 3300026078 Bacteria 4660
121 Ga0207676_10013482 3300026095 Bacteria 5872
122 Ga0207674_10000640 3300026116 Bacteria 45541
123 Ga0207674_10024429 3300026116 Bacteria 6459
124 Ga0209999_1000953 3300027543 Bacteria 4880
125 Ga0265332_10006686 3300031238 Bacteria 5222
126 Ga0265314_10008528 3300031711 Bacteria 8763
127 Ga0307410_10005974 3300031852 Bacteria 6516
128 Ga0307409_100018494 3300031995 Bacteria 4688
129 Ga0307416_100000400 3300032002 Bacteria 22240
130 Ga0307415_100001123 3300032126 Bacteria 12492
131 Ga0373959_0000053 3300034820 Bacteria 26512
132 Ga0373926_0001211 3300035083 Bacteria 7743
133 Ga0373934_0000075 3300035086 Bacteria 34357
134 Ga0373923_0000275 3300035111 Bacteria 11233
135 Ga0373956_0000469 3300035119 Bacteria 16612
136 Ga0373933_0000070 3300035724 Bacteria 62610
137 Ga0373937_0000153 3300036401 Bacteria 66867
138 Ga0373925_0003033 3300037068 Bacteria 13212
139 Ga0436365_0883404 3300039437 Bacteria 7629
140 Ga0466966_0011199 3300044684 Bacteria 5951
141 Ga0495629_0044812 3300046459 Bacteria 3104
142 Ga0495651_0000554 3300046462 Bacteria 28830
143 Ga0495653_0000160 3300046463 Bacteria 55860
144 Ga0495580_0000512 3300046472 Bacteria 32601
145 Ga0495582_0015604 3300046473 Unclassified 4170
146 Ga0495594_0006222 3300046499 Bacteria 6137
147 Ga0495608_0000141 3300046511 Bacteria 52164
148 Ga0495628_0000113 3300046516 Bacteria 65741
149 Ga0495630_0070445 3300046517 Unclassified 2631
150 Ga0495652_0001424 3300046529 Bacteria 26545
151 Ga0495665_0024284 3300046531 Unclassified 3256
152 Ga0495587_0000193 3300046536 Bacteria 45053
153 Ga0495645_0000129 3300046543 Bacteria 51343
154 Ga0495667_0000601 3300046559 Bacteria 22962
155 Ga0495635_0000064 3300046663 Bacteria 65195
156 Ga0495657_0000495 3300046675 Bacteria 36944
157 Ga0495623_0000017 3300046679 Bacteria 108556
158 Ga0495658_0006611 3300046683 Bacteria 5696
159 Ga0495600_0000414 3300046809 Bacteria 22070
160 Ga0495581_0025446 3300047315 Unclassified 3431
161 Ga0495604_0000017 3300047317 Bacteria 192029
162 Ga0495674_0004122 3300047319 Bacteria 14024
163 Ga0495672_0002003 3300047320 Bacteria 19242
164 Ga0495680_0026923 3300047322 Bacteria 4733
165 Ga0495675_0032547 3300047444 Bacteria 3327
166 Ga0495684_0002501 3300047471 Bacteria 14644
167 Ga0495593_0000143 3300047673 Bacteria 34902
168 Ga0495602_0000688 3300048088 Bacteria 31774
169 Ga0495614_0007454 3300048089 Unclassified 4871
170 Ga0496112_0001251 3300048915 Bacteria 19227
171 Ga0501033_0032872 3300049570 Unclassified 3895
172 Ga0501034_0033272 3300049571 Bacteria 5232
173 Ga0501034_0052147 3300049571 Unclassified 4122
174 Ga0501038_0042978 3300049574 Unclassified 3933
175 nmdc:mga0n895_92775_c1 3300050512 Unclassified 3023
176 Ga0495612_0000470 3300053078 Bacteria 16217
177 Ga0495619_0017368 3300053085 Bacteria 4556
178 Ga0070717_10006602
179 Ga0070658_10023111
180 Ga0070683_100001853
181 Ga0070683_100018898
182 Ga0070683_100047349
183 Ga0070690_100011986
184 Ga0070670_100001789
185 Ga0068869_100002203
186 Ga0070680_100000188
187 Ga0070680_100002343
188 Ga0070680_100014009
189 Ga0070682_100000425
190 Ga0068868_100006371
191 Ga0070687_100009810
192 Ga0070668_100020707
193 Ga0070675_100003782
194 Ga0070675_100024448
195 Ga0070659_100001191
196 Ga0070709_10004506
197 Ga0070709_10019888
198 Ga0070714_100049116
199 Ga0070708_100000320
200 Ga0070663_100014197
201 Ga0070681_10000831
202 Ga0070681_10004377
203 Ga0070681_10011235
204 Ga0070681_10017690
205 Ga0070681_10022552
206 Ga0070681_10025264
207 Ga0070681_10037516
208 Ga0070681_10038556
209 Ga0070681_10042839
210 Ga0070706_100047012
211 Ga0070707_100001908
212 Ga0070679_100000546
213 Ga0070679_100001548
214 Ga0070679_100003071
215 Ga0070679_100003759
216 Ga0070679_100005122
217 Ga0070679_100008956
218 Ga0070679_100010018
219 Ga0070679_100016621
220 Ga0070679_100036743
221 Ga0070684_100000095
222 Ga0070684_100016903
223 Ga0070695_100019931
224 Ga0070693_100000329
225 Ga0070693_100001842
226 Ga0070693_100006617
227 Ga0070664_100012295
228 Ga0068857_100023612
229 Ga0068852_100031294
230 Ga0068864_100004303
231 Ga0068860_100016238
232 Ga0081539_10000327
233 Ga0081539_10019953
234 Ga0068871_100055445
235 Ga0068865_100001520
236 Ga0075436_100001907
237 Ga0105245_10006094
238 Ga0105245_10014786
239 Ga0105245_10017575
240 Ga0114129_10045156
241 Ga0105241_10001480
242 Ga0105241_10017918
243 Ga0105248_10014618
244 Ga0105248_10048810
245 Ga0105238_10035994
246 Ga0105246_10003884
247 Ga0157373_10059524
248 Ga0157371_10009157
249 Ga0157371_10015401
250 Ga0157374_10015007
251 Ga0157378_10007720
252 Ga0157372_10001535
253 Ga0157372_10004125
254 Ga0157372_10029146
255 Ga0157372_10031433
256 Ga0157375_10006445
257 Ga0157375_10056141
258 Ga0182008_10007413
259 Ga0157377_10001548
260 Ga0213876_10005867
261 Ga0207699_10009208
262 Ga0207645_10012247
263 Ga0207643_10012742
264 Ga0207654_10003597
265 Ga0207654_10007182
266 Ga0207707_10012774
267 Ga0207695_10012503
268 Ga0207660_10001167
269 Ga0207662_10011131
270 Ga0207657_10010834
271 Ga0207657_10015952
272 Ga0207657_10016661
273 Ga0207649_10001738
274 Ga0207649_10003194
275 Ga0207652_10001349
276 Ga0207652_10002290
277 Ga0207646_10001245
278 Ga0207664_10040765
279 Ga0207690_10010264
280 Ga0207706_10000649
281 Ga0207686_10021682
282 Ga0207665_10000337
283 Ga0207711_10011309
284 Ga0207689_10006099
285 Ga0207661_10000857
286 Ga0207661_10024173
287 Ga0207661_10036748
288 Ga0207679_10021765
289 Ga0207679_10023365
290 Ga0207667_10021808
291 Ga0207667_10039698
292 Ga0207712_10000127
293 Ga0207668_10007554
294 Ga0207677_10009859
295 Ga0207678_10001494
296 Ga0207708_10007325
297 Ga0207702_10028259
298 Ga0207676_10013482
299 Ga0207674_10000640
300 Ga0207674_10024429
301 Ga0209999_1000953
302 Ga0265332_10006686
303 Ga0265314_10008528
304 Ga0307410_10005974
305 Ga0307409_100018494
306 Ga0307416_100000400
307 Ga0307415_100001123
308 Ga0373959_0000053
309 Ga0373926_0001211
310 Ga0373934_0000075
311 Ga0373923_0000275
312 Ga0373956_0000469
313 Ga0373933_0000070
314 Ga0373937_0000153
315 Ga0373925_0003033
316 Ga0436365_0883404
317 Ga0466966_0011199
318 Ga0495629_0044812
319 Ga0495651_0000554
320 Ga0495653_0000160
321 Ga0495580_0000512
322 Ga0495582_0015604
323 Ga0495594_0006222
324 Ga0495608_0000141
325 Ga0495628_0000113
326 Ga0495630_0070445
327 Ga0495652_0001424
328 Ga0495665_0024284
329 Ga0495587_0000193
330 Ga0495645_0000129
331 Ga0495667_0000601
332 Ga0495635_0000064
333 Ga0495657_0000495
334 Ga0495623_0000017
335 Ga0495658_0006611
336 Ga0495600_0000414
337 Ga0495581_0025446
338 Ga0495604_0000017
339 Ga0495674_0004122
340 Ga0495672_0002003
341 Ga0495680_0026923
342 Ga0495675_0032547
343 Ga0495684_0002501
344 Ga0495593_0000143
345 Ga0495602_0000688
346 Ga0495614_0007454
347 Ga0496112_0001251
348 Ga0501033_0032872
349 Ga0501034_0033272
350 Ga0501034_0052147
351 Ga0501038_0042978
352 nmdc:mga0n895_92775_c1
353 Ga0495612_0000470
354 Ga0495619_0017368

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07676

PD40

WD40-like Beta Propeller Repeat

530

556

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
7btx-assembly1.cif.gz_A the mitochondrial sam-mdm10 supercomplex in gdn micelle from s.cere 0.6031 613 990
6wil-assembly1.cif.gz_A cdib from acinetobacter baumannii 0.6011 613 990
7btx-assembly1.cif.gz_A the mitochondrial sam-mdm10 supercomplex in gdn micelle from s.cere 0.5957 613 990
7vku-assembly1.cif.gz_A cryo-em structure of sam-tom40 intermediate complex 0.5952 613 990
7xzj-assembly1.cif.gz_7 cryo-em structure of toc complex from chlamydomonas reinhardtii. 0.5885 627 990
ID Description Score Start End Superfamily
af_G5EG67_297_429_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.8433 399 491 2.120.10.30
af_A0A286YAQ3_1104_1421_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.6632 330 506 2.120.10.30
af_A0A1D6GDM6_475_615_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.6614 407 555 2.120.10.30
2qdzA01 Mainly Beta;Beta Barrel;Porin;membrane protein fhac: a member of the omp85/tpsb transporter family 0.638 615 990 2.40.160.50
af_A0A0R0KDD4_80_291_2.120.10.80 Mainly Beta;6 Propeller;Neuraminidase;Kelch-type beta propeller 0.6272 311 494 2.120.10.80
ID Description Score Start End GO Terms
AF-A0A838Q9L4-F1-model_v4 PD40 domain-containing protein 0.9063 43 665
AF-A0A832BU42-F1-model_v4 deleted 0.8946 48 293
AF-A0A661NTX1-F1-model_v4 Bacterial surface antigen (D15) domain-containing protein 0.8728 101 990 GO:0019867
AF-A0A832BU42-F1-model_v4 deleted 0.8672 48 293
AF-A0A0S8HA69-F1-model_v4 Bacterial surface antigen (D15) domain-containing protein 0.865 37 990

Map