F269219

General Info

Members Datasets Scaffolds Average Seq Length
176 147 126 629

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2870721527|2870725107
Length 693
Sequence LARVLGDQPPPFALIHRPATAGPDTVDLIIGEVTTPDTLAAVPMPAVPMARPTPVVSMPAWPTPAWPAEVAPTVPMSAWPTQSWPTQAVPMAGPIPAVPTPAGARRAGHSVLVLVPYKQITERGYVCVDDGTPLVAMTVTDQTTLSLAEVAAALPDVPIHLENGRYEPDDDGYAEIVRRVVAEEIGTGEGANFVVKRSYTADIADYGPHRALSFFRRLLSREQSAYWTFVVHTGDRTLVGATPERHVSLRDGVAVMNPISGTYRYPPGGPTSDELLAFLADRKETDELYMVVDEELKMMARLCERGGRVVGPFLKEMAHLAHTEYLIEGRTARGPLDILRETMFAPTVTGSPLENACRVIARHEPAGRGYYSGVVALIGADESGDDVMDSAILIRTADIDPTGHLGIAVGATLVRHSDPASETAETKAKAASLLTPLQADGRVTPAAPARPKSPSGGSSFRNDPEIRAALARRNLTLADFWLTDADHRAAPVPVAAGRRALVVDMEDTFTAMIDHLLRSAGLDVTVRRYDEPHDPDEYELVVLGPGPGNPQADDERRTAHLRAAVDRLLAHRRPFLAVCLSHQVLSSRLGLDVVRRDVPNQGVQREIDLFGDIERVGFYNTYAARSDTDVLLCEGFTVQMARDARTGEVDALRGPFFASTQFHPESILTTNGADILARLFTAVLTSADAVTPG

Samples

Sample ID Description Type Environment
1 2511231006 Pseudomonas sp. GM17 Isolate Nodule
2 2512047018 Pseudomonas chlororaphis chlororaphis GP72 Isolate Rhizosphere
3 2554235132 Pseudomonas aeruginosa PGPR2 Isolate Unclassified
4 2582580891 Pseudomonas chlororaphis YL-1 Isolate Unclassified
5 2597489887 Pseudomonas chlororaphis aureofaciens 30-84 Isolate Rhizosphere
6 2599185185 Pseudomonas sp. NFPP07 Isolate Rhizoplane
7 2599185239 Burkholderia sp. NFACC38-1 Isolate Rhizoplane
8 2599185257 Pseudomonas sp. NFACC41-3 Isolate Rhizoplane
9 2606217733 Pseudomonas aeruginosa NFHH01 Isolate Rhizoplane
10 2643221571 Pseudomonas sp. Root569 Isolate Unclassified
11 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
12 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
13 2671180172 Pseudomonas sp. NFIX51 Isolate Rhizoplane
14 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
15 2740892503 Pseudomonas chlororaphis piscium PCL1391 Isolate Unclassified
16 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
17 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
18 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
19 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
20 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
21 2860867994 Pseudomonas sp. R1-43-08 Isolate Rhizosphere
22 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
23 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
24 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
25 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
26 2891562705 Microbispora tritici MT50 Isolate Unclassified
27 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
28 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
29 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
30 2923153595 Pseudomonas chlororaphis piscium PCL1391 Isolate Unclassified
31 2929189879 Pseudomonas sp. R-71842 Hybrid assembly Isolate Unclassified
32 2946027586 Pseudomonas sp. W4I3 Isolate Rhizosphere
33 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
34 2947233263 Pseudomonas synxantha W2I4 Isolate Rhizosphere
35 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
36 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
37 2984286254 Pseudomonas chlororaphis aurantiaca JD37 Isolate Rhizosphere
38 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
39 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
40 3007395558 Pseudomonas chlororaphis PCL1601 Isolate Rhizosphere
41 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
42 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
43 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
44 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
45 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
46 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
47 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
48 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
49 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
50 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
51 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
52 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
53 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
54 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
55 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
56 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
57 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
58 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
59 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
60 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
61 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
63 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
67 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
71 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
72 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
83 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
84 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
85 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
86 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
87 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
88 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
89 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
90 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
91 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
92 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
93 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
94 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
95 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
96 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
97 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
98 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
99 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
100 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
101 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
102 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
103 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
104 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
105 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
106 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
107 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
108 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
109 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
110 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
111 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
112 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
113 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
114 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
115 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
116 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
117 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
118 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
119 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
120 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
121 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
131 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
132 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
134 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
135 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
136 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
137 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
138 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
139 8015687852 Pseudomonas chlororaphis aurantiaca RP4 Isolate Rhizosphere
140 8018845410 Burkholderia reimsis BE51 Isolate Rhizosphere
141 8019769354 Pseudomonas sp. MSSRFD41 Isolate Rhizosphere
142 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
143 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere
144 8055770955 Pseudomonas chlororaphis qlu-1 Isolate Rhizosphere
145 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified
146 8056148874 Pseudomonas khavaziana SWRI124 Isolate Rhizosphere
147 8057798959 Pseudomonas piscis BW16M1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 70.45
Metatranscriptomes 1.14
Isolates 28.41

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.09
Nodule 1.14
Rhizoplane 2.84
Rhizosphere 64.2
Stem 0
Stem Tuber 0
Unclassified 22.73

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10006700 3300001979 Bacteria 4746
2 JGI25406J46586_10001214 3300003203 Bacteria 12132
3 JGI25153J46596_10011290 3300003215 Bacteria 3962
4 rootH1_10016941 3300003316 Bacteria 7992
5 rootH2_10021120 3300003320 Bacteria 19784
6 rootH1_10005182 3300003323 Bacteria 23031
7 rootH1_10013384 3300003323 Bacteria 20557
8 Ga0006562J51391_1002276 3300003578 Bacteria 6907
9 Ga0006562J51391_1002277 3300003578 Bacteria 4040
10 Ga0055532_1000223 3300003758 Bacteria 42993
11 Ga0055536_1000125 3300003781 Bacteria 65908
12 Ga0055530_10000130 3300003791 Bacteria 65904
13 Ga0055540_1000409 3300003792 Bacteria 34777
14 Ga0065165_1006002 3300005262 Bacteria 6550
15 Ga0070659_100100632 3300005366 Bacteria 2326
16 Ga0070710_10000233 3300005437 Bacteria 25969
17 Ga0068855_100000174 3300005563 Bacteria 82404
18 Ga0068855_100025568 3300005563 Bacteria 7061
19 Ga0068857_100013722 3300005577 Bacteria 7061
20 Ga0068854_100000026 3300005578 Bacteria 118880
21 Ga0068854_100000678 3300005578 Bacteria 20309
22 Ga0068852_100034646 3300005616 Bacteria 4203
23 Ga0081539_10000179 3300005985 Bacteria 149126
24 Ga0081539_10006568 3300005985 Bacteria 11073
25 Ga0105240_10001284 3300009093 Bacteria 43463
26 Ga0114129_10000041 3300009147 Bacteria 107656
27 Ga0105237_10000079 3300009545 Bacteria 127925
28 Ga0105238_10020322 3300009551 Bacteria 6760
29 Ga0105249_10028000 3300009553 Bacteria 5087
30 Ga0157372_10000302 3300013307 Bacteria 54963
31 Ga0213875_10000786 3300021388 Bacteria 23720
32 Ga0213875_10001321 3300021388 Bacteria 16390
33 Ga0209566_100638 3300025225 Bacteria 21333
34 Ga0209147_100021 3300025229 Bacteria 464719
35 Ga0209676_1000006 3300025292 Bacteria 1039588
36 Ga0209025_1025328 3300025294 Bacteria 3024
37 Ga0209758_1000315 3300025297 Bacteria 93638
38 Ga0209050_1000317 3300025298 Bacteria 98196
39 Ga0209051_1000218 3300025303 Bacteria 97013
40 Ga0207692_10000810 3300025898 Bacteria 11153
41 Ga0207647_10000634 3300025904 Bacteria 27396
42 Ga0207695_10000401 3300025913 Bacteria 96946
43 Ga0207695_10000541 3300025913 Bacteria 78696
44 Ga0207671_10000009 3300025914 Bacteria 724862
45 Ga0207667_10000077 3300025949 Bacteria 166095
46 Ga0207667_10000261 3300025949 Bacteria 73194
47 Ga0207640_10000032 3300025981 Bacteria 116582
48 Ga0207640_10000146 3300025981 Bacteria 51504
49 Ga0207674_10000551 3300026116 Bacteria 49136
50 Ga0207698_10036814 3300026142 Bacteria 3597
51 Ga0209371_1001649 3300027312 Bacteria 14356
52 Ga0268256_1001322 3300030500 Bacteria 15193
53 Ga0307512_10004041 3300030522 Bacteria 16344
54 Ga0307512_10023250 3300030522 Bacteria 5543
55 Ga0265327_10002173 3300031251 Bacteria 21587
56 Ga0265327_10019528 3300031251 Bacteria 4162
57 Ga0307508_10101982 3300031616 Bacteria 2466
58 Ga0307507_10015291 3300033179 Bacteria 9044
59 Ga0373962_0003091 3300035242 Bacteria 3988
60 Ga0395899_0041253 3300037312 Bacteria 3449
61 Ga0436364_0633675 3300037853 Bacteria 25140
62 Ga0436364_1306130 3300037853 Bacteria 16394
63 Ga0451853_0067714 3300041512 Bacteria 2919
64 Ga0439463_000003 3300042016 Bacteria 52583
65 Ga0439440_0000179 3300042993 Bacteria 9711
66 Ga0466969_0000208 3300044656 Bacteria 32016
67 Ga0466972_0007776 3300044658 Bacteria 5381
68 Ga0466966_0021915 3300044684 Bacteria 4195
69 Ga0466961_0001289 3300044693 Bacteria 15446
70 Ga0466961_0029199 3300044693 Bacteria 3546
71 Ga0466971_0000584 3300044719 Bacteria 14408
72 Ga0466970_0006387 3300044765 Bacteria 5892
73 Ga0466957_0024059 3300044842 Bacteria 3605
74 Ga0466960_0000903 3300044901 Bacteria 10513
75 Ga0466959_0000182 3300045049 Bacteria 41499
76 Ga0466959_0000480 3300045049 Bacteria 23284
77 Ga0466958_0022693 3300045836 Bacteria 3680
78 Ga0466958_0035872 3300045836 Bacteria 2965
79 Ga0495592_0010987 3300046454 Bacteria 6832
80 Ga0495603_0003449 3300046455 Bacteria 9403
81 Ga0495629_0000570 3300046459 Bacteria 29927
82 Ga0495629_0005566 3300046459 Bacteria 9404
83 Ga0495594_0003132 3300046499 Bacteria 8550
84 Ga0495652_0031838 3300046529 Bacteria 4616
85 Ga0495640_0034223 3300046533 Bacteria 3605
86 Ga0495622_0027577 3300046557 Bacteria 2651
87 Ga0495589_0000377 3300046794 Bacteria 34084
88 Ga0495600_0036399 3300046809 Bacteria 3198
89 Ga0495676_0000760 3300047321 Bacteria 26888
90 Ga0495676_0006486 3300047321 Bacteria 10784
91 Ga0495675_0032438 3300047444 Bacteria 3333
92 Ga0495679_001102 3300047446 Bacteria 16309
93 Ga0496121_0008047 3300048924 Bacteria 12569
94 Ga0496122_0000575 3300048925 Bacteria 75355
95 Ga0496123_0000333 3300048926 Bacteria 89644
96 Ga0496124_0002355 3300048927 Bacteria 24936
97 Ga0496125_0000752 3300048928 Bacteria 53483
98 Ga0496125_0064458 3300048928 Bacteria 2911
99 Ga0501032_0044037 3300049569 Bacteria 3021
100 Ga0501033_0080155 3300049570 Bacteria 2395
101 Ga0501034_0011704 3300049571 Bacteria 9076
102 Ga0501034_0013575 3300049571 Bacteria 8383
103 Ga0501036_0003115 3300049572 Bacteria 13234
104 Ga0501036_0019044 3300049572 Bacteria 5760
105 Ga0501037_0007521 3300049573 Bacteria 7977
106 Ga0501038_0048146 3300049574 Bacteria 3690
107 Ga0501039_0002382 3300049575 Bacteria 13980
108 Ga0501039_0030405 3300049575 Bacteria 4164
109 Ga0501043_0001724 3300049579 Bacteria 18911
110 Ga0501043_0020257 3300049579 Bacteria 5221
111 Ga0501047_0011322 3300049581 Bacteria 8445
112 Ga0501047_0013413 3300049581 Bacteria 7770
113 Ga0501047_0021439 3300049581 Bacteria 6204
114 Ga0501070_0000581 3300049586 Bacteria 33287
115 Ga0501070_0004575 3300049586 Bacteria 11852
116 Ga0501074_0001585 3300049590 Bacteria 15413
117 Ga0501035_0000362 3300049822 Bacteria 52504
118 Ga0501035_0018233 3300049822 Bacteria 6465
119 Ga0501035_0018438 3300049822 Bacteria 6429
120 Ga0501044_0005013 3300049823 Bacteria 14787
121 Ga0501044_0012447 3300049823 Bacteria 9212
122 nmdc:mga05p37_2244_c1 3300050507 Bacteria 22504
123 nmdc:mga0qj67_16703_c1 3300050509 Bacteria 5571
124 Ga0500646_0007278 3300053090 Bacteria 2826
125 Ga0500573_0070636 3300053140 Bacteria 1992
126 Ga0500577_0009320 3300053142 Bacteria 2844

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2606217733 2608385480 524
2 3300053140 Ga0500573_0070636 Ga0500573_0070636_28_1890 557
3 3300053142 Ga0500577_0009320 Ga0500577_0009320_884_2638 570
4 3300041512 Ga0451853_0067714 Ga0451853_0067714_438_2240 573
5 3300005985 Ga0081539_10000179 Ga0081539_10000179131 578
6 3300046533 Ga0495640_0034223 Ga0495640_0034223_1356_3125 578
7 3300044842 Ga0466957_0024059 Ga0466957_0024059_1535_3367 589
8 3300005366 Ga0070659_100100632 Ga0070659_1001006321 592
9 3300009147 Ga0114129_10000041 Ga0114129_1000004196 596
10 3300050507 nmdc:mga05p37_2244_c1 nmdc:mga05p37_2244_c1_15366_17204 596
11 3300030522 Ga0307512_10023250 Ga0307512_100232503 598
12 3300030522 Ga0307512_10004041 Ga0307512_1000404116 600
13 3300048928 Ga0496125_0064458 Ga0496125_0064458_1022_2881 600
14 3300049581 Ga0501047_0021439 Ga0501047_0021439_2595_4604 600
15 3300048925 Ga0496122_0000575 Ga0496122_0000575_20701_22548 601
16 3300048926 Ga0496123_0000333 Ga0496123_0000333_47475_49322 601
17 3300048927 Ga0496124_0002355 Ga0496124_0002355_395_2242 601
18 3300044658 Ga0466972_0007776 Ga0466972_0007776_2615_4498 602
19 3300046455 Ga0495603_0003449 Ga0495603_0003449_6718_8640 602
20 3300046459 Ga0495629_0000570 Ga0495629_0000570_1368_3290 602
21 3300046499 Ga0495594_0003132 Ga0495594_0003132_1664_3586 602
22 3300046557 Ga0495622_0027577 Ga0495622_0027577_245_2167 602
23 iso_pu_bacteria 8054107350 8054109958 602
24 3300005437 Ga0070710_10000233 Ga0070710_1000023313 603
25 3300025898 Ga0207692_10000810 Ga0207692_100008103 603
26 3300049823 Ga0501044_0005013 Ga0501044_0005013_2285_4246 603
27 iso_pu_bacteria 2687453743 2689995730 604
28 3300013307 Ga0157372_10000302 Ga0157372_1000030234 605
29 3300031251 Ga0265327_10002173 Ga0265327_1000217318 606
30 3300031251 Ga0265327_10019528 Ga0265327_100195283 606
31 3300046454 Ga0495592_0010987 Ga0495592_0010987_2018_3955 606
32 3300046529 Ga0495652_0031838 Ga0495652_0031838_1967_3904 606
33 3300046809 Ga0495600_0036399 Ga0495600_0036399_31_1968 606
34 3300044901 Ga0466960_0000903 Ga0466960_0000903_3550_5412 607
35 3300049571 Ga0501034_0013575 Ga0501034_0013575_5511_7469 607
36 3300049572 Ga0501036_0003115 Ga0501036_0003115_10234_12192 607
37 3300049574 Ga0501038_0048146 Ga0501038_0048146_1162_3120 607
38 3300049575 Ga0501039_0002382 Ga0501039_0002382_5828_7786 607
39 3300049579 Ga0501043_0001724 Ga0501043_0001724_3442_5400 607
40 3300049581 Ga0501047_0013413 Ga0501047_0013413_3400_5358 607
41 3300049586 Ga0501070_0000581 Ga0501070_0000581_23331_25289 607
42 3300049590 Ga0501074_0001585 Ga0501074_0001585_10042_12000 607
43 3300044656 Ga0466969_0000208 Ga0466969_0000208_28443_30350 608
44 3300044684 Ga0466966_0021915 Ga0466966_0021915_1139_3046 608
45 3300044719 Ga0466971_0000584 Ga0466971_0000584_10963_12870 608
46 3300045049 Ga0466959_0000480 Ga0466959_0000480_11865_13772 608
47 3300045836 Ga0466958_0035872 Ga0466958_0035872_741_2648 608
48 3300003320 rootH2_10021120 rootH2_1002112016 609
49 3300044693 Ga0466961_0029199 Ga0466961_0029199_749_2650 609
50 3300046459 Ga0495629_0005566 Ga0495629_0005566_6900_8837 609
51 3300047321 Ga0495676_0000760 Ga0495676_0000760_16914_18851 609
52 3300049822 Ga0501035_0000362 Ga0501035_0000362_5218_7173 610
53 3300009551 Ga0105238_10020322 Ga0105238_100203227 611
54 3300026142 Ga0207698_10036814 Ga0207698_100368143 611
55 3300050509 nmdc:mga0qj67_16703_c1 nmdc:mga0qj67_16703_c1_3603_5552 611
56 iso_pu_bacteria 2751185734 2753075659 611
57 iso_pu_bacteria 2808606359 2808849104 611
58 iso_pu_bacteria 2808606982 2811846395 611
59 iso_pu_bacteria 2870721527 2870725107 611
60 iso_pu_bacteria 2875391855 2875394948 611
61 iso_pu_bacteria 2912715099 2912716568 611
62 iso_pu_bacteria 8056060235 8056064705 611
63 3300031616 Ga0307508_10101982 Ga0307508_101019822 612
64 3300049572 Ga0501036_0019044 Ga0501036_0019044_370_2247 612
65 iso_pu_bacteria 2954380949 2954381075 612
66 iso_pu_bacteria 3006486233 3006486255 612
67 3300003323 rootH1_10005182 rootH1_100051826 613
68 3300009553 Ga0105249_10028000 Ga0105249_100280003 613
69 3300047321 Ga0495676_0006486 Ga0495676_0006486_5324_7261 613
70 3300047444 Ga0495675_0032438 Ga0495675_0032438_90_2066 613
71 3300053090 Ga0500646_0007278 Ga0500646_0007278_270_2177 613
72 iso_pu_bacteria 2554235132 2554813126 613
73 iso_pu_bacteria 2643221601 2644018441 613
74 iso_pu_bacteria 2643221631 2644177562 613
75 iso_pu_bacteria 2856741275 2856744777 613
76 iso_pu_bacteria 2891554331 2891557437 613
77 iso_pu_bacteria 2891562705 2891564060 613
78 iso_pu_bacteria 2954002825 2954003500 613
79 iso_pu_bacteria 2990088156 2990093160 613
80 iso_pu_bacteria 8056060235 8056066328 613
81 3300003203 JGI25406J46586_10001214 JGI25406J46586_100012142 614
82 3300003323 rootH1_10013384 rootH1_100133845 614
83 3300003781 Ga0055536_1000125 Ga0055536_10001259 614
84 3300003791 Ga0055530_10000130 Ga0055530_1000013060 614
85 3300003792 Ga0055540_1000409 Ga0055540_100040934 614
86 3300005985 Ga0081539_10006568 Ga0081539_100065687 614
87 3300021388 Ga0213875_10001321 Ga0213875_1000132111 614
88 3300025292 Ga0209676_1000006 Ga0209676_1000006944 614
89 3300025298 Ga0209050_1000317 Ga0209050_100031760 614
90 3300025303 Ga0209051_1000218 Ga0209051_100021838 614
91 3300027312 Ga0209371_1001649 Ga0209371_100164912 614
92 3300030500 Ga0268256_1001322 Ga0268256_10013224 614
93 3300033179 Ga0307507_10015291 Ga0307507_100152915 614
94 3300035242 Ga0373962_0003091 Ga0373962_0003091_379_2265 614
95 3300037312 Ga0395899_0041253 Ga0395899_0041253_1119_3002 614
96 3300037853 Ga0436364_1306130 Ga0436364_1306130_12546_14447 614
97 3300042016 Ga0439463_000003 Ga0439463_000003_30146_32059 614
98 3300042993 Ga0439440_0000179 Ga0439440_0000179_4979_6892 614
99 3300046794 Ga0495589_0000377 Ga0495589_0000377_18677_20590 614
100 3300047446 Ga0495679_001102 Ga0495679_001102_12909_14822 614
101 3300049569 Ga0501032_0044037 Ga0501032_0044037_800_2761 614
102 3300049570 Ga0501033_0080155 Ga0501033_0080155_210_2171 614
103 3300049571 Ga0501034_0011704 Ga0501034_0011704_5079_7040 614
104 3300049573 Ga0501037_0007521 Ga0501037_0007521_2691_4652 614
105 3300049575 Ga0501039_0030405 Ga0501039_0030405_617_2578 614
106 3300049579 Ga0501043_0020257 Ga0501043_0020257_2812_4743 614
107 3300049581 Ga0501047_0011322 Ga0501047_0011322_5162_7123 614
108 3300049586 Ga0501070_0004575 Ga0501070_0004575_6577_8538 614
109 3300049822 Ga0501035_0018233 Ga0501035_0018233_4465_6396 614
110 3300049822 Ga0501035_0018438 Ga0501035_0018438_1884_3845 614
111 3300049823 Ga0501044_0012447 Ga0501044_0012447_4506_6437 614
112 iso_pu_bacteria 2511231006 2511264191 614
113 iso_pu_bacteria 2512047018 2512324498 614
114 iso_pu_bacteria 2582580891 2583794602 614
115 iso_pu_bacteria 2597489887 2597860172 614
116 iso_pu_bacteria 2599185185 2599483010 614
117 iso_pu_bacteria 2599185257 2599803270 614
118 iso_pu_bacteria 2643221571 2643874175 614
119 iso_pu_bacteria 2671180172 2671771157 614
120 iso_pu_bacteria 2740892503 2743739717 614
121 iso_pu_bacteria 2791354901 2791916462 614
122 iso_pu_bacteria 2860867994 2860870587 614
123 iso_pu_bacteria 2863404153 2863409610 614
124 iso_pu_bacteria 2895880812 2895883656 614
125 iso_pu_bacteria 2923153595 2923158805 614
126 iso_pu_bacteria 2929189879 2929192567 614
127 iso_pu_bacteria 2946027586 2946030954 614
128 iso_pu_bacteria 2947233263 2947237795 614
129 iso_pu_bacteria 2984286254 2984287373 614
130 iso_pu_bacteria 3007395558 3007398431 614
131 iso_pu_bacteria 8015687852 8015692886 614
132 iso_pu_bacteria 8019769354 8019773976 614
133 iso_pu_bacteria 8055770955 8055776133 614
134 iso_pu_bacteria 8056148874 8056154802 614
135 iso_pu_bacteria 8057798959 8057800403 614
136 3300003758 Ga0055532_1000223 Ga0055532_100022310 615
137 3300021388 Ga0213875_10000786 Ga0213875_1000078613 615
138 3300025225 Ga0209566_100638 Ga0209566_1006388 615
139 3300025229 Ga0209147_100021 Ga0209147_100021212 615
140 3300037853 Ga0436364_0633675 Ga0436364_0633675_9284_11386 615
141 3300044693 Ga0466961_0001289 Ga0466961_0001289_2119_3993 615
142 3300044765 Ga0466970_0006387 Ga0466970_0006387_1638_3512 615
143 3300045049 Ga0466959_0000182 Ga0466959_0000182_16305_18179 615
144 3300045836 Ga0466958_0022693 Ga0466958_0022693_934_2817 615
145 iso_pu_bacteria 2599185239 2599737482 615
146 iso_pu_bacteria 2912757875 2912763825 615
147 iso_pu_bacteria 2947224130 2947225332 615
148 iso_pu_bacteria 8018845410 8018851218 615
149 iso_pu_bacteria 8048406513 8048408839 615
150 3300003316 rootH1_10016941 rootH1_100169414 617
151 3300005262 Ga0065165_1006002 Ga0065165_10060024 617
152 3300001979 JGI24740J21852_10006700 JGI24740J21852_100067003 618
153 3300003215 JGI25153J46596_10011290 JGI25153J46596_100112903 618
154 3300003578 Ga0006562J51391_1002276 Ga0006562J51391_10022763 618
155 3300003578 Ga0006562J51391_1002277 Ga0006562J51391_10022771 618
156 3300005563 Ga0068855_100000174 Ga0068855_10000017457 618
157 3300005563 Ga0068855_100025568 Ga0068855_1000255682 618
158 3300005577 Ga0068857_100013722 Ga0068857_1000137222 618
159 3300005578 Ga0068854_100000026 Ga0068854_10000002632 618
160 3300005578 Ga0068854_100000678 Ga0068854_10000067811 618
161 3300005616 Ga0068852_100034646 Ga0068852_1000346464 618
162 3300009093 Ga0105240_10001284 Ga0105240_1000128429 618
163 3300009545 Ga0105237_10000079 Ga0105237_1000007976 618
164 3300025294 Ga0209025_1025328 Ga0209025_10253283 618
165 3300025297 Ga0209758_1000315 Ga0209758_100031525 618
166 3300025904 Ga0207647_10000634 Ga0207647_1000063411 618
167 3300025913 Ga0207695_10000401 Ga0207695_1000040163 618
168 3300025913 Ga0207695_10000541 Ga0207695_1000054134 618
169 3300025914 Ga0207671_10000009 Ga0207671_10000009301 618
170 3300025949 Ga0207667_10000077 Ga0207667_10000077120 618
171 3300025949 Ga0207667_10000261 Ga0207667_1000026120 618
172 3300025981 Ga0207640_10000032 Ga0207640_1000003243 618
173 3300025981 Ga0207640_10000146 Ga0207640_1000014614 618
174 3300026116 Ga0207674_10000551 Ga0207674_1000055129 618
175 3300048924 Ga0496121_0008047 Ga0496121_0008047_2309_4168 618
176 3300048928 Ga0496125_0000752 Ga0496125_0000752_47726_49585 618

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00425

Chorismate_bind

chorismate binding enzyme

169

429

0.89

PF00117

GATase

Glutamine amidotransferase class-I

501

683

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
5cwa-assembly1.cif.gz_A structure of anthranilate synthase component i (trpe) from mycobacterium tuberculosis with inhibitor bound 0.8174 10 382
4a5o-assembly2.cif.gz_C crystal structure of pseudomonas aeruginosa n5, n10- methylenetetrahydrofolate dehydrogenase-cyclohydrolase (fold) 0.8128 426 478
1wl8-assembly1.cif.gz_A crystal structure of ph1346 protein from pyrococcus horikoshii 0.809 429 615
5jy8-assembly2.cif.gz_B an iron-bound structure of the isochorismate synthase entc 0.8061 17 383
1qdl-assembly1.cif.gz_A-2 the crystal structure of anthranilate synthase from sulfolobus solfataricus 0.8019 14 383
ID Description Score Start End Superfamily
3r74A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.9785 429 616 3.40.50.880
3r74A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.9632 429 616 3.40.50.880
3r76A01 Alpha Beta;4-Layer Sandwich;Anthranilate synthase;Anthranilate synthase 0.9464 1 382 3.60.120.10
3r76A01 Alpha Beta;4-Layer Sandwich;Anthranilate synthase;Anthranilate synthase 0.9369 1 382 3.60.120.10
af_Q2G098_2_383_3.60.120.10 Alpha Beta;4-Layer Sandwich;Anthranilate synthase;Anthranilate synthase 0.846 18 381 3.60.120.10
ID Description Score Start End GO Terms
AF-A0A6F8XX51-F1-model_v4 Glutamine amidotransferase domain-containing protein 0.9927 490 595
AF-A0A6I5CCC1-F1-model_v4 Phenazine-specific anthranilate synthase component I 0.9847 470 586
AF-A0A5P0YXS0-F1-model_v4 Phenazine-specific anthranilate synthase component I 0.9816 486 617 GO:0006541
AF-A0A4R4LJW3-F1-model_v4 deleted 0.9793 58 356
AF-A0A3L7CC33-F1-model_v4 Chorismate-binding protein 0.9751 470 618 GO:0006541

Feature Viewer

pLDDT pTM Quality
89.09 0.66 Medium
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Predicted Structure (AlphaFold2)

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