F267919

General Info

Members Datasets Scaffolds Average Seq Length
176 138 176 240

Family's Representative Sequence

Representative Sequence 3300005548|Ga0070665_100002485|Ga0070665_10000248514
Length 274
Sequence MPVATAGRISGRKKEIPNRCGIAGTVARLAWALMSADERPILLAIQHVPWEGPHRILDACGGLDVHTVKPLAGQPLPDHDQVAGAVVMGGPMNVDEVEAHPELASEREWLAEALRREVPVLGICLGAQLLARALGAEVRAGEGAELGYAPVEILDPNDSILGALAPSTTVLHWHGDVFDLPEGAEHLARSERTEVQAFRHGNAWGVLFHPESDFALLEAWLAVSEMVHAACEALGDDGAAALPAEAEAAEADLLARTTLGLEAFASLVESHRPS

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
16 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
27 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
28 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
29 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
30 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
31 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
32 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
33 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
34 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
35 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
36 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
37 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
62 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
63 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
64 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
65 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
66 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
67 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
68 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
69 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
70 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
71 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
72 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
73 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
74 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
75 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
76 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
77 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
78 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
79 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
80 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
81 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
82 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
83 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
84 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
85 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
86 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
87 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
88 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
89 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
90 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
91 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
92 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
93 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
94 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
95 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
96 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
97 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
98 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
99 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
100 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
101 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
102 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
103 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
104 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
105 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
106 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
107 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
108 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
109 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
110 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
111 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
112 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
113 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
114 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
115 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
116 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
117 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
118 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
119 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
120 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
121 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
122 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
123 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
124 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
125 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
126 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
127 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
128 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
129 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
130 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
131 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
132 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
133 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
134 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
135 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
136 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
137 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
138 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.27
Nodule 0
Rhizoplane 13.64
Rhizosphere 80.68
Stem 0
Stem Tuber 0
Unclassified 3.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100004191 3300005329 Bacteria 11822
2 Ga0070680_100071541 3300005336 Bacteria 2850
3 Ga0070682_100000023 3300005337 Bacteria 206016
4 Ga0068868_100026349 3300005338 Bacteria 4430
5 Ga0070691_10000267 3300005341 Bacteria 18196
6 Ga0070668_100876970 3300005347 Bacteria 801
7 Ga0070688_100000010 3300005365 Bacteria 84103
8 Ga0070714_100084174 3300005435 Bacteria 2775
9 Ga0070700_100037889 3300005441 Bacteria 2935
10 Ga0070681_10035359 3300005458 Bacteria 5019
11 Ga0070685_10000010 3300005466 Bacteria 146946
12 Ga0070679_100092998 3300005530 Bacteria 3003
13 Ga0070684_100003798 3300005535 Bacteria 11411
14 Ga0068853_100004487 3300005539 Bacteria 10828
15 Ga0070695_100215249 3300005545 Bacteria 1381
16 Ga0070693_100000307 3300005547 Bacteria 22748
17 Ga0070665_100001275 3300005548 Bacteria 30231
18 Ga0070665_100002485 3300005548 Bacteria 20306
19 Ga0070665_100032790 3300005548 Bacteria 5227
20 Ga0070664_100395570 3300005564 Bacteria 1263
21 Ga0068857_100215400 3300005577 Bacteria 1753
22 Ga0068856_100014732 3300005614 Bacteria 7546
23 Ga0068852_100268714 3300005616 Bacteria 1640
24 Ga0068861_100033685 3300005719 Bacteria 3782
25 Ga0068863_100000111 3300005841 Bacteria 86322
26 Ga0068863_100603869 3300005841 Bacteria 1086
27 Ga0068858_100000046 3300005842 Bacteria 127519
28 Ga0068858_100000733 3300005842 Bacteria 34359
29 Ga0081539_10000776 3300005985 Bacteria 62705
30 Ga0105245_10000040 3300009098 Bacteria 144005
31 Ga0105245_10046251 3300009098 Bacteria 3889
32 Ga0105247_10000288 3300009101 Bacteria 45854
33 Ga0105243_10002412 3300009148 Bacteria 15655
34 Ga0105242_10364611 3300009176 Bacteria 1338
35 Ga0105249_10000150 3300009553 Bacteria 88154
36 Ga0105249_10364005 3300009553 Bacteria 1468
37 Ga0157374_10002031 3300013296 Bacteria 16991
38 Ga0157378_10005991 3300013297 Bacteria 10656
39 Ga0157378_10006192 3300013297 Bacteria 10469
40 Ga0157375_11312193 3300013308 Unclassified 851
41 Ga0157380_10000427 3300014326 Bacteria 25606
42 Ga0157380_10644232 3300014326 Bacteria 1056
43 Ga0157379_10020809 3300014968 Bacteria 5806
44 Ga0157379_10369875 3300014968 Bacteria 1314
45 Ga0163161_10060830 3300017792 Bacteria 2750
46 Ga0207682_10000012 3300025893 Bacteria 84521
47 Ga0207710_10000207 3300025900 Bacteria 54262
48 Ga0207680_10002080 3300025903 Bacteria 9381
49 Ga0207707_10006223 3300025912 Bacteria 10427
50 Ga0207695_10452125 3300025913 Bacteria 1167
51 Ga0207649_10000003 3300025920 Bacteria 388908
52 Ga0207652_10000080 3300025921 Bacteria 104739
53 Ga0207687_10000046 3300025927 Bacteria 99576
54 Ga0207687_10000245 3300025927 Bacteria 36917
55 Ga0207664_10062434 3300025929 Bacteria 2976
56 Ga0207686_10000124 3300025934 Bacteria 62335
57 Ga0207686_10232331 3300025934 Bacteria 1338
58 Ga0207709_10002155 3300025935 Bacteria 12604
59 Ga0207661_10018992 3300025944 Bacteria 5115
60 Ga0207661_10062007 3300025944 Bacteria 3024
61 Ga0207712_10000027 3300025961 Bacteria 263739
62 Ga0207712_10091469 3300025961 Bacteria 2241
63 Ga0207668_10667048 3300025972 Bacteria 911
64 Ga0207677_10037024 3300026023 Bacteria 3186
65 Ga0207703_10000042 3300026035 Bacteria 161459
66 Ga0207703_10000054 3300026035 Bacteria 143734
67 Ga0207639_10003322 3300026041 Bacteria 10829
68 Ga0207639_10715009 3300026041 Bacteria 930
69 Ga0207708_10056217 3300026075 Bacteria 3002
70 Ga0207702_10238203 3300026078 Bacteria 1704
71 Ga0207641_10000062 3300026088 Bacteria 159982
72 Ga0207641_10005696 3300026088 Bacteria 10601
73 Ga0207675_100136966 3300026118 Bacteria 2324
74 Ga0207683_10061628 3300026121 Bacteria 3302
75 Ga0207698_10002679 3300026142 Bacteria 10595
76 Ga0268266_10000099 3300028379 Bacteria 182294
77 Ga0268266_10001389 3300028379 Bacteria 29082
78 Ga0268266_10017742 3300028379 Bacteria 6065
79 Ga0265337_1000141 3300028556 Bacteria 36041
80 Ga0265326_10002610 3300028558 Bacteria 6043
81 Ga0265319_1047295 3300028563 Bacteria 1432
82 Ga0265322_10000005 3300028654 Bacteria 246112
83 Ga0265338_10009602 3300028800 Bacteria 11495
84 Ga0265324_10000264 3300029957 Bacteria 39067
85 Ga0307511_10158091 3300030521 Bacteria 1280
86 Ga0265332_10031265 3300031238 Bacteria 2323
87 Ga0265328_10028859 3300031239 Bacteria 2074
88 Ga0265320_10000010 3300031240 Bacteria 250501
89 Ga0265325_10026647 3300031241 Bacteria 3129
90 Ga0265329_10004037 3300031242 Bacteria 6238
91 Ga0265331_10004085 3300031250 Bacteria 9173
92 Ga0265327_10000040 3300031251 Bacteria 291052
93 Ga0265316_10019504 3300031344 Bacteria 5798
94 Ga0265314_10000491 3300031711 Bacteria 51373
95 Ga0451853_0730445 3300041512 Bacteria 8346
96 Ga0466963_0000011 3300044694 Bacteria 65918
97 Ga0495592_0320319 3300046454 Bacteria 1002
98 Ga0495629_0001898 3300046459 Bacteria 16279
99 Ga0495638_0085685 3300046460 Bacteria 1905
100 Ga0495641_0000004 3300046461 Bacteria 210501
101 Ga0495653_0131709 3300046463 Bacteria 1769
102 Ga0495594_0000009 3300046499 Bacteria 122139
103 Ga0495620_0000041 3300046515 Bacteria 112605
104 Ga0495628_0048581 3300046516 Bacteria 3363
105 Ga0495630_0000026 3300046517 Bacteria 147084
106 Ga0495630_0244168 3300046517 Bacteria 1372
107 Ga0495644_0001052 3300046523 Bacteria 11491
108 Ga0495586_0000741 3300046535 Bacteria 18708
109 Ga0495645_0024530 3300046543 Bacteria 4377
110 Ga0495645_0082048 3300046543 Bacteria 2313
111 Ga0495622_0000097 3300046557 Bacteria 76953
112 Ga0495667_0287532 3300046559 Unclassified 1043
113 Ga0495656_0000227 3300046615 Bacteria 19910
114 Ga0495668_0138495 3300046616 Bacteria 1332
115 Ga0495634_0001547 3300046642 Bacteria 20312
116 Ga0495634_0072429 3300046642 Bacteria 2266
117 Ga0495625_0000613 3300046660 Bacteria 51734
118 Ga0495635_0076283 3300046663 Bacteria 2297
119 Ga0495588_0000073 3300046674 Bacteria 219005
120 Ga0495599_0007742 3300046678 Bacteria 6520
121 Ga0495647_0000004 3300046681 Bacteria 140700
122 Ga0495669_0000223 3300046684 Bacteria 33954
123 Ga0495613_0269827 3300046689 Bacteria 1184
124 Ga0495624_0000123 3300046690 Bacteria 54291
125 Ga0495649_0005908 3300046694 Bacteria 7675
126 Ga0495604_0236157 3300047317 Bacteria 1252
127 Ga0495674_0000182 3300047319 Bacteria 49773
128 Ga0495674_0703826 3300047319 Bacteria 793
129 Ga0495676_0000544 3300047321 Bacteria 30974
130 Ga0495676_0135781 3300047321 Bacteria 1769
131 Ga0495675_0197776 3300047444 Bacteria 1225
132 Ga0495686_0160835 3300047472 Bacteria 1312
133 Ga0496100_0000024 3300048903 Bacteria 116138
134 Ga0496101_0000072 3300048904 Bacteria 116138
135 Ga0496102_0000075 3300048905 Bacteria 147013
136 Ga0496102_0124874 3300048905 Bacteria 2405
137 Ga0496103_0000107 3300048906 Bacteria 91213
138 Ga0496104_0000008 3300048907 Bacteria 516976
139 Ga0496105_0000003 3300048908 Bacteria 713251
140 Ga0496106_0000040 3300048909 Bacteria 108754
141 Ga0496106_0000042 3300048909 Bacteria 106662
142 Ga0496107_0000025 3300048910 Bacteria 116138
143 Ga0496107_0253116 3300048910 Bacteria 1310
144 Ga0496108_0000039 3300048911 Bacteria 149440
145 Ga0496108_0006543 3300048911 Bacteria 9450
146 Ga0496109_0000038 3300048912 Bacteria 150745
147 Ga0496109_0000066 3300048912 Bacteria 112004
148 Ga0496109_0086275 3300048912 Bacteria 2899
149 Ga0496110_0009817 3300048913 Bacteria 7753
150 Ga0496110_0421206 3300048913 Bacteria 1217
151 Ga0496111_0007864 3300048914 Bacteria 7027
152 Ga0496114_0000003 3300048917 Bacteria 630981
153 Ga0496114_0005074 3300048917 Bacteria 10264
154 Ga0496114_0047451 3300048917 Bacteria 3573
155 Ga0496115_0000031 3300048918 Bacteria 138258
156 Ga0496115_0010536 3300048918 Bacteria 6911
157 Ga0496117_0215554 3300048920 Bacteria 1073
158 Ga0496118_0039780 3300048921 Bacteria 3747
159 Ga0496121_0209525 3300048924 Bacteria 1382
160 Ga0496125_0048212 3300048928 Bacteria 3555
161 Ga0501068_0236977 3300049584 Bacteria 1161
162 Ga0501068_0371965 3300049584 Bacteria 920
163 Ga0501075_0026920 3300049591 Bacteria 4235
164 Ga0501075_0228109 3300049591 Bacteria 1420
165 nmdc:mga0qj67_114602_c1 3300050509 Bacteria 2177
166 Ga0495601_0000022 3300053077 Bacteria 148418
167 Ga0495601_0002219 3300053077 Bacteria 10935
168 Ga0495612_0000246 3300053078 Bacteria 22433
169 Ga0495612_0003417 3300053078 Bacteria 6581
170 Ga0495655_0000005 3300053083 Bacteria 257472
171 Ga0495619_0000793 3300053085 Bacteria 20713
172 Ga0495619_0008996 3300053085 Bacteria 6302
173 Ga0500566_0005409 3300053094 Bacteria 7595
174 Ga0500641_0002917 3300053096 Bacteria 6065
175 Ga0500614_000149 3300053123 Bacteria 17523
176 Ga0500628_000013 3300053129 Bacteria 106419

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053096 Ga0500641_0002917 Ga0500641_0002917_1198_1917 218
2 3300013296 Ga0157374_10002031 Ga0157374_100020319 221
3 3300005564 Ga0070664_100395570 Ga0070664_1003955702 225
4 3300005577 Ga0068857_100215400 Ga0068857_1002154002 225
5 3300025944 Ga0207661_10062007 Ga0207661_100620072 225
6 3300047321 Ga0495676_0135781 Ga0495676_0135781_11_688 225
7 3300028558 Ga0265326_10002610 Ga0265326_100026108 226
8 3300031250 Ga0265331_10004085 Ga0265331_1000408510 226
9 3300014326 Ga0157380_10000427 Ga0157380_100004277 229
10 3300048928 Ga0496125_0048212 Ga0496125_0048212_164_883 229
11 3300048912 Ga0496109_0086275 Ga0496109_0086275_573_1268 231
12 3300048914 Ga0496111_0007864 Ga0496111_0007864_3115_3810 231
13 3300049584 Ga0501068_0371965 Ga0501068_0371965_55_753 232
14 3300046517 Ga0495630_0000026 Ga0495630_0000026_32301_33002 233
15 3300046642 Ga0495634_0001547 Ga0495634_0001547_12337_13041 233
16 3300046642 Ga0495634_0072429 Ga0495634_0072429_1527_2228 233
17 3300053077 Ga0495601_0002219 Ga0495601_0002219_6096_6797 233
18 3300053085 Ga0495619_0008996 Ga0495619_0008996_887_1588 233
19 3300005435 Ga0070714_100084174 Ga0070714_1000841742 234
20 3300025929 Ga0207664_10062434 Ga0207664_100624342 234
21 3300046543 Ga0495645_0024530 Ga0495645_0024530_3562_4269 234
22 3300046559 Ga0495667_0287532 Ga0495667_0287532_107_811 234
23 3300046663 Ga0495635_0076283 Ga0495635_0076283_528_1232 234
24 3300053085 Ga0495619_0000793 Ga0495619_0000793_16950_17654 234
25 3300046463 Ga0495653_0131709 Ga0495653_0131709_320_1048 236
26 3300046689 Ga0495613_0269827 Ga0495613_0269827_259_975 236
27 3300005338 Ga0068868_100026349 Ga0068868_1000263496 237
28 3300005347 Ga0070668_100876970 Ga0070668_1008769701 237
29 3300009148 Ga0105243_10002412 Ga0105243_100024126 237
30 3300009176 Ga0105242_10364611 Ga0105242_103646111 237
31 3300014326 Ga0157380_10644232 Ga0157380_106442322 237
32 3300025934 Ga0207686_10232331 Ga0207686_102323311 237
33 3300025935 Ga0207709_10002155 Ga0207709_1000215511 237
34 3300025972 Ga0207668_10667048 Ga0207668_106670482 237
35 3300026023 Ga0207677_10037024 Ga0207677_100370244 237
36 3300046615 Ga0495656_0000227 Ga0495656_0000227_15597_16310 237
37 3300005365 Ga0070688_100000010 Ga0070688_10000001073 238
38 3300005466 Ga0070685_10000010 Ga0070685_1000001054 238
39 3300005548 Ga0070665_100001275 Ga0070665_1000012753 238
40 3300005548 Ga0070665_100032790 Ga0070665_1000327904 238
41 3300005616 Ga0068852_100268714 Ga0068852_1002687142 238
42 3300005719 Ga0068861_100033685 Ga0068861_1000336853 238
43 3300005842 Ga0068858_100000046 Ga0068858_100000046120 238
44 3300009553 Ga0105249_10000150 Ga0105249_100001509 238
45 3300013297 Ga0157378_10006192 Ga0157378_100061923 238
46 3300014968 Ga0157379_10020809 Ga0157379_1002080911 238
47 3300017792 Ga0163161_10060830 Ga0163161_100608305 238
48 3300025903 Ga0207680_10002080 Ga0207680_100020809 238
49 3300025913 Ga0207695_10452125 Ga0207695_104521251 238
50 3300025920 Ga0207649_10000003 Ga0207649_1000000375 238
51 3300025961 Ga0207712_10000027 Ga0207712_1000002784 238
52 3300026035 Ga0207703_10000042 Ga0207703_1000004284 238
53 3300026118 Ga0207675_100136966 Ga0207675_1001369663 238
54 3300026121 Ga0207683_10061628 Ga0207683_100616283 238
55 3300026142 Ga0207698_10002679 Ga0207698_100026792 238
56 3300028379 Ga0268266_10001389 Ga0268266_1000138916 238
57 3300028379 Ga0268266_10017742 Ga0268266_100177423 238
58 3300028556 Ga0265337_1000141 Ga0265337_100014137 238
59 3300028563 Ga0265319_1047295 Ga0265319_10472953 238
60 3300028654 Ga0265322_10000005 Ga0265322_10000005213 238
61 3300029957 Ga0265324_10000264 Ga0265324_100002647 238
62 3300031239 Ga0265328_10028859 Ga0265328_100288592 238
63 3300031240 Ga0265320_10000010 Ga0265320_10000010259 238
64 3300031242 Ga0265329_10004037 Ga0265329_100040377 238
65 3300031251 Ga0265327_10000040 Ga0265327_1000004047 238
66 3300031344 Ga0265316_10019504 Ga0265316_100195042 238
67 3300031711 Ga0265314_10000491 Ga0265314_1000049110 238
68 3300046516 Ga0495628_0048581 Ga0495628_0048581_2178_2894 238
69 3300046674 Ga0495588_0000073 Ga0495588_0000073_134685_135401 238
70 3300047319 Ga0495674_0703826 Ga0495674_0703826_31_747 238
71 3300048911 Ga0496108_0006543 Ga0496108_0006543_4102_4818 238
72 3300048912 Ga0496109_0000066 Ga0496109_0000066_38386_39102 238
73 3300048913 Ga0496110_0421206 Ga0496110_0421206_441_1157 238
74 3300048917 Ga0496114_0000003 Ga0496114_0000003_522391_523107 238
75 3300048918 Ga0496115_0000031 Ga0496115_0000031_128396_129112 238
76 3300049584 Ga0501068_0236977 Ga0501068_0236977_16_732 238
77 3300053078 Ga0495612_0000246 Ga0495612_0000246_15571_16287 238
78 3300005341 Ga0070691_10000267 Ga0070691_100002676 239
79 3300005545 Ga0070695_100215249 Ga0070695_1002152492 239
80 3300005985 Ga0081539_10000776 Ga0081539_1000077673 239
81 3300009101 Ga0105247_10000288 Ga0105247_1000028833 239
82 3300013297 Ga0157378_10005991 Ga0157378_100059917 239
83 3300025900 Ga0207710_10000207 Ga0207710_1000020741 239
84 3300025934 Ga0207686_10000124 Ga0207686_1000012443 239
85 3300046459 Ga0495629_0001898 Ga0495629_0001898_12407_13141 239
86 3300046460 Ga0495638_0085685 Ga0495638_0085685_36_755 239
87 3300046499 Ga0495594_0000009 Ga0495594_0000009_83428_84147 239
88 3300046557 Ga0495622_0000097 Ga0495622_0000097_34432_35151 239
89 3300046660 Ga0495625_0000613 Ga0495625_0000613_31782_32501 239
90 3300047444 Ga0495675_0197776 Ga0495675_0197776_52_771 239
91 3300047472 Ga0495686_0160835 Ga0495686_0160835_469_1188 239
92 3300048905 Ga0496102_0000075 Ga0496102_0000075_129598_130317 239
93 3300048906 Ga0496103_0000107 Ga0496103_0000107_86380_87099 239
94 3300048917 Ga0496114_0047451 Ga0496114_0047451_1236_1967 239
95 3300048918 Ga0496115_0010536 Ga0496115_0010536_5801_6532 239
96 3300048924 Ga0496121_0209525 Ga0496121_0209525_298_1017 239
97 3300049591 Ga0501075_0026920 Ga0501075_0026920_201_923 239
98 3300050509 nmdc:mga0qj67_114602_c1 nmdc:mga0qj67_114602_c1_247_966 239
99 3300053083 Ga0495655_0000005 Ga0495655_0000005_217850_218584 239
100 3300053094 Ga0500566_0005409 Ga0500566_0005409_5186_5920 239
101 3300053129 Ga0500628_000013 Ga0500628_000013_39064_39798 239
102 3300005441 Ga0070700_100037889 Ga0070700_1000378892 240
103 3300005841 Ga0068863_100603869 Ga0068863_1006038692 240
104 3300026075 Ga0207708_10056217 Ga0207708_100562174 240
105 3300026088 Ga0207641_10005696 Ga0207641_100056965 240
106 3300028800 Ga0265338_10009602 Ga0265338_100096027 240
107 3300030521 Ga0307511_10158091 Ga0307511_101580913 240
108 3300031238 Ga0265332_10031265 Ga0265332_100312653 240
109 3300031241 Ga0265325_10026647 Ga0265325_100266474 240
110 3300005329 Ga0070683_100004191 Ga0070683_1000041916 241
111 3300005336 Ga0070680_100071541 Ga0070680_1000715413 241
112 3300005337 Ga0070682_100000023 Ga0070682_100000023118 241
113 3300005458 Ga0070681_10035359 Ga0070681_100353595 241
114 3300005530 Ga0070679_100092998 Ga0070679_1000929986 241
115 3300005535 Ga0070684_100003798 Ga0070684_1000037987 241
116 3300005539 Ga0068853_100004487 Ga0068853_1000044875 241
117 3300005547 Ga0070693_100000307 Ga0070693_10000030715 241
118 3300005548 Ga0070665_100002485 Ga0070665_10000248514 241
119 3300005614 Ga0068856_100014732 Ga0068856_1000147322 241
120 3300005841 Ga0068863_100000111 Ga0068863_100000111111 241
121 3300005842 Ga0068858_100000733 Ga0068858_10000073314 241
122 3300009098 Ga0105245_10000040 Ga0105245_1000004073 241
123 3300009098 Ga0105245_10046251 Ga0105245_100462515 241
124 3300009553 Ga0105249_10364005 Ga0105249_103640052 241
125 3300013308 Ga0157375_11312193 Ga0157375_113121931 241
126 3300014968 Ga0157379_10369875 Ga0157379_103698752 241
127 3300025893 Ga0207682_10000012 Ga0207682_1000001268 241
128 3300025912 Ga0207707_10006223 Ga0207707_100062236 241
129 3300025921 Ga0207652_10000080 Ga0207652_100000806 241
130 3300025927 Ga0207687_10000046 Ga0207687_1000004644 241
131 3300025927 Ga0207687_10000245 Ga0207687_1000024541 241
132 3300025944 Ga0207661_10018992 Ga0207661_100189924 241
133 3300025961 Ga0207712_10091469 Ga0207712_100914694 241
134 3300026035 Ga0207703_10000054 Ga0207703_10000054143 241
135 3300026041 Ga0207639_10003322 Ga0207639_100033224 241
136 3300026041 Ga0207639_10715009 Ga0207639_107150091 241
137 3300026078 Ga0207702_10238203 Ga0207702_102382032 241
138 3300026088 Ga0207641_10000062 Ga0207641_100000629 241
139 3300028379 Ga0268266_10000099 Ga0268266_10000099144 241
140 3300041512 Ga0451853_0730445 Ga0451853_0730445_6212_6937 241
141 3300044694 Ga0466963_0000011 Ga0466963_0000011_59105_59830 241
142 3300046454 Ga0495592_0320319 Ga0495592_0320319_251_976 241
143 3300046461 Ga0495641_0000004 Ga0495641_0000004_24433_25158 241
144 3300046515 Ga0495620_0000041 Ga0495620_0000041_72522_73247 241
145 3300046517 Ga0495630_0244168 Ga0495630_0244168_163_888 241
146 3300046523 Ga0495644_0001052 Ga0495644_0001052_8491_9219 241
147 3300046535 Ga0495586_0000741 Ga0495586_0000741_8601_9329 241
148 3300046543 Ga0495645_0082048 Ga0495645_0082048_1292_2017 241
149 3300046616 Ga0495668_0138495 Ga0495668_0138495_424_1152 241
150 3300046678 Ga0495599_0007742 Ga0495599_0007742_4686_5411 241
151 3300046681 Ga0495647_0000004 Ga0495647_0000004_17358_18086 241
152 3300046684 Ga0495669_0000223 Ga0495669_0000223_5571_6302 241
153 3300046690 Ga0495624_0000123 Ga0495624_0000123_48154_48882 241
154 3300046694 Ga0495649_0005908 Ga0495649_0005908_3479_4204 241
155 3300047317 Ga0495604_0236157 Ga0495604_0236157_80_808 241
156 3300047319 Ga0495674_0000182 Ga0495674_0000182_12109_12843 241
157 3300047321 Ga0495676_0000544 Ga0495676_0000544_3791_4516 241
158 3300048903 Ga0496100_0000024 Ga0496100_0000024_39136_39867 241
159 3300048904 Ga0496101_0000072 Ga0496101_0000072_76272_77003 241
160 3300048905 Ga0496102_0124874 Ga0496102_0124874_413_1147 241
161 3300048907 Ga0496104_0000008 Ga0496104_0000008_88741_89472 241
162 3300048908 Ga0496105_0000003 Ga0496105_0000003_88741_89472 241
163 3300048909 Ga0496106_0000040 Ga0496106_0000040_31752_32483 241
164 3300048909 Ga0496106_0000042 Ga0496106_0000042_26434_27162 241
165 3300048910 Ga0496107_0000025 Ga0496107_0000025_39136_39867 241
166 3300048910 Ga0496107_0253116 Ga0496107_0253116_324_1052 241
167 3300048911 Ga0496108_0000039 Ga0496108_0000039_123525_124250 241
168 3300048912 Ga0496109_0000038 Ga0496109_0000038_25420_26145 241
169 3300048913 Ga0496110_0009817 Ga0496110_0009817_2877_3602 241
170 3300048917 Ga0496114_0005074 Ga0496114_0005074_8014_8739 241
171 3300048920 Ga0496117_0215554 Ga0496117_0215554_57_788 241
172 3300048921 Ga0496118_0039780 Ga0496118_0039780_2153_2884 241
173 3300049591 Ga0501075_0228109 Ga0501075_0228109_78_806 241
174 3300053077 Ga0495601_0000022 Ga0495601_0000022_121203_121928 241
175 3300053078 Ga0495612_0003417 Ga0495612_0003417_4318_5043 241
176 3300053123 Ga0500614_000149 Ga0500614_000149_12320_13045 241

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00117

GATase

Glutamine amidotransferase class-I

60

219

0.86

PF07722

Peptidase_C26

Peptidase C26

80

141

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
1o1y-assembly1.cif.gz_A crystal structure of a glutamine amidotransferase (tm1158) from thermotoga maritima at 1.70 a resolution 0.8848 5 237
1o1y-assembly1.cif.gz_A crystal structure of a glutamine amidotransferase (tm1158) from thermotoga maritima at 1.70 a resolution 0.8775 5 237
3m3p-assembly1.cif.gz_A crystal structure of glutamine amido transferase from methylobacillus flagellatus 0.8741 6 234
3l7n-assembly1.cif.gz_A crystal structure of smu.1228c 0.8524 8 235
7d54-assembly1.cif.gz_B crstal structure msgatase with gln 0.8329 6 241
ID Description Score Start End Superfamily
1o1yA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.896 5 237 3.40.50.880
1o1yA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.8884 5 237 3.40.50.880
3l83A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.8788 7 234 3.40.50.880
af_Q59T45_76_269_3.40.50.880 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.8707 48 183 3.40.50.880
3l7nA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.8524 8 235 3.40.50.880
ID Description Score Start End GO Terms
AF-A0A1H6FRL2-F1-model_v4 GMP synthase (Glutamine-hydrolysing) 0.9814 12 235 GO:0005829
GO:0006541
AF-A0A7V4PP28-F1-model_v4 Glutamine amidotransferase domain-containing protein 0.971 9 189 GO:0005829
GO:0006541
AF-A0A2M7JRF9-F1-model_v4 GMP synthase 0.9669 8 173 GO:0005829
AF-A0A258DEL8-F1-model_v4 Glutamine amidotransferase domain-containing protein 0.9657 8 175 GO:0005829
AF-A0A7V2YXH0-F1-model_v4 Glutamine amidotransferase domain-containing protein 0.9647 8 102

Feature Viewer

pLDDT pTM Quality
92.3 0.91 High
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Predicted Structure (AlphaFold2)

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