F248625

General Info

Members Datasets Scaffolds Average Seq Length
166 107 166 205

Family's Representative Sequence

Representative Sequence 3300028380|Ga0268265_10094944|Ga0268265_100949442
Length 218
Sequence MEFQYYGGNCIKISTKQATFIVDDNLKQLGSKSVTKPDSVALFTTLPASNPDARLVITDPGEYEVSEVSIFGIAARSHMDEKGKKSATIYKLQYDDTRVCILGHIYPSLTEDELEEIGTVDILIAPVGGNGYTLDGVGALSVIKQIEPKLVIPTHFDDGDLKYEVPMQPLTEALKGLAMEPKETVAKFKPKPTDYAENVQLIVLERKRLCMSIDVQVL

Samples

Sample ID Description Type Environment
1 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
28 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
29 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
67 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
68 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
69 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
70 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
71 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
72 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
73 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
74 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
75 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
76 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
77 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
78 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
79 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
80 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
81 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
82 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
83 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
86 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
97 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
98 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
99 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
100 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
101 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
102 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
103 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
104 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
105 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
106 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
107 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.23
Nodule 0
Rhizoplane 0
Rhizosphere 92.17
Stem 0
Stem Tuber 0
Unclassified 0.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1000060 3300001915 Bacteria 26403
2 JGI24740J21852_10001472 3300001979 Bacteria 10810
3 rootH2_10300530 3300003320 Bacteria 2436
4 Ga0070683_100061846 3300005329 Unclassified 3481
5 Ga0070683_100259361 3300005329 Unclassified 1653
6 Ga0070683_100339486 3300005329 Unclassified 1430
7 Ga0070670_100820083 3300005331 Unclassified 841
8 Ga0070666_10172667 3300005335 Bacteria 1514
9 Ga0070680_100708269 3300005336 Unclassified 866
10 Ga0070682_100139225 3300005337 Bacteria 1652
11 Ga0070668_100047448 3300005347 Bacteria 3302
12 Ga0070668_100262245 3300005347 Bacteria 1437
13 Ga0070669_100282950 3300005353 Bacteria 1329
14 Ga0070671_100233393 3300005355 Bacteria 1561
15 Ga0070667_100067605 3300005367 Bacteria 3038
16 Ga0070714_100012012 3300005435 Bacteria 6892
17 Ga0070681_10328655 3300005458 Bacteria 1438
18 Ga0070681_10779070 3300005458 Unclassified 873
19 Ga0070679_100112014 3300005530 Unclassified 2715
20 Ga0070679_100129176 3300005530 Bacteria 2508
21 Ga0070679_100135420 3300005530 Bacteria 2445
22 Ga0070679_100286459 3300005530 Bacteria 1599
23 Ga0070684_100096368 3300005535 Unclassified 2637
24 Ga0068853_100052377 3300005539 Bacteria 3516
25 Ga0068853_100316780 3300005539 Bacteria 1445
26 Ga0070696_100139365 3300005546 Bacteria 1771
27 Ga0068855_100062955 3300005563 Bacteria 4330
28 Ga0068855_100164232 3300005563 Bacteria 2518
29 Ga0068857_100024864 3300005577 Bacteria 5275
30 Ga0068852_100479125 3300005616 Unclassified 1236
31 Ga0068870_10317093 3300005840 Unclassified 989
32 Ga0068858_100006886 3300005842 Bacteria 11051
33 Ga0068858_100251730 3300005842 Bacteria 1678
34 Ga0068860_100011983 3300005843 Bacteria 8542
35 Ga0068862_100378815 3300005844 Bacteria 1319
36 Ga0081539_10100569 3300005985 Bacteria 1474
37 Ga0075369_10000004 3300006186 Bacteria 154675
38 Ga0075369_10138623 3300006186 Bacteria 1108
39 Ga0075366_10156294 3300006195 Bacteria 1381
40 Ga0068871_100104489 3300006358 Bacteria 2376
41 Ga0068865_100852711 3300006881 Unclassified 789
42 Ga0105240_10095074 3300009093 Bacteria 3634
43 Ga0105240_10243895 3300009093 Bacteria 2081
44 Ga0105240_11484867 3300009093 Unclassified 711
45 Ga0105245_10000096 3300009098 Bacteria 84679
46 Ga0105241_10058445 3300009174 Unclassified 2962
47 Ga0105241_10162783 3300009174 Unclassified 1836
48 Ga0105241_10245199 3300009174 Bacteria 1516
49 Ga0105241_10299214 3300009174 Bacteria 1380
50 Ga0105248_10011514 3300009177 Bacteria 9749
51 Ga0105237_10127373 3300009545 Bacteria 2540
52 Ga0105238_10331799 3300009551 Unclassified 1508
53 Ga0105249_11181455 3300009553 Unclassified 836
54 Ga0105239_10905927 3300010375 Bacteria 1012
55 Ga0157370_10195532 3300013104 Bacteria 1877
56 Ga0157370_10275029 3300013104 Bacteria 1556
57 Ga0157369_10011081 3300013105 Bacteria 10257
58 Ga0157374_10000014 3300013296 Bacteria 396846
59 Ga0157374_10328274 3300013296 Unclassified 1517
60 Ga0157372_10212711 3300013307 Bacteria 2241
61 Ga0157372_10960358 3300013307 Bacteria 991
62 Ga0163163_10002696 3300014325 Bacteria 15011
63 Ga0163163_10003384 3300014325 Bacteria 13536
64 Ga0207654_10094880 3300025911 Unclassified 1826
65 Ga0207654_10531963 3300025911 Unclassified 833
66 Ga0207707_10093560 3300025912 Unclassified 2626
67 Ga0207707_10112580 3300025912 Unclassified 2379
68 Ga0207695_10236846 3300025913 Bacteria 1727
69 Ga0207660_10018239 3300025917 Bacteria 4675
70 Ga0207657_10163991 3300025919 Unclassified 1803
71 Ga0207649_10026523 3300025920 Unclassified 3390
72 Ga0207652_10014617 3300025921 Bacteria 6363
73 Ga0207652_10278757 3300025921 Unclassified 1508
74 Ga0207681_10186990 3300025923 Bacteria 1582
75 Ga0207694_10002441 3300025924 Bacteria 15149
76 Ga0207694_10125390 3300025924 Unclassified 2054
77 Ga0207694_10566834 3300025924 Bacteria 954
78 Ga0207687_10000008 3300025927 Bacteria 497738
79 Ga0207664_10004400 3300025929 Bacteria 9542
80 Ga0207711_10073203 3300025941 Bacteria 2978
81 Ga0207661_10059918 3300025944 Unclassified 3069
82 Ga0207661_10063285 3300025944 Bacteria 2996
83 Ga0207661_10303333 3300025944 Unclassified 1432
84 Ga0207667_10012418 3300025949 Bacteria 9817
85 Ga0207667_10014341 3300025949 Bacteria 9039
86 Ga0207667_10092594 3300025949 Bacteria 3122
87 Ga0207712_10717753 3300025961 Unclassified 873
88 Ga0207668_10015287 3300025972 Unclassified 4765
89 Ga0207658_10064943 3300025986 Bacteria 2739
90 Ga0207703_10024856 3300026035 Bacteria 4713
91 Ga0207639_10019687 3300026041 Bacteria 4818
92 Ga0207639_10673804 3300026041 Bacteria 958
93 Ga0207674_10007247 3300026116 Bacteria 12933
94 Ga0207674_10095282 3300026116 Bacteria 2963
95 Ga0207698_10060443 3300026142 Bacteria 2947
96 Ga0207698_10127420 3300026142 Bacteria 2168
97 Ga0268265_10094944 3300028380 Bacteria 2393
98 Ga0268265_10681290 3300028380 Unclassified 991
99 Ga0265337_1000264 3300028556 Bacteria 28474
100 Ga0265337_1067979 3300028556 Unclassified 981
101 Ga0265326_10010107 3300028558 Unclassified 2808
102 Ga0265319_1023327 3300028563 Unclassified 2243
103 Ga0265334_10000039 3300028573 Bacteria 100608
104 Ga0265334_10002962 3300028573 Bacteria 7782
105 Ga0265334_10043231 3300028573 Unclassified 1753
106 Ga0265318_10004835 3300028577 Bacteria 6437
107 Ga0265322_10012430 3300028654 Bacteria 2463
108 Ga0265322_10034787 3300028654 Unclassified 1435
109 Ga0265338_10000003 3300028800 Bacteria 733923
110 Ga0265338_10005849 3300028800 Bacteria 15874
111 Ga0265338_10007039 3300028800 Bacteria 14110
112 Ga0265338_10023807 3300028800 Bacteria 6280
113 Ga0265338_10040371 3300028800 Bacteria 4384
114 Ga0265338_10042370 3300028800 Bacteria 4240
115 Ga0265338_10129038 3300028800 Unclassified 2000
116 Ga0265338_10180186 3300028800 Bacteria 1611
117 Ga0265338_10273555 3300028800 Unclassified 1237
118 Ga0265324_10005268 3300029957 Bacteria 5621
119 Ga0265324_10005382 3300029957 Bacteria 5540
120 Ga0265320_10120361 3300031240 Bacteria 1197
121 Ga0265325_10045868 3300031241 Unclassified 2269
122 Ga0265325_10101868 3300031241 Archaea 1404
123 Ga0265329_10024282 3300031242 Bacteria 2013
124 Ga0265339_10004760 3300031249 Bacteria 9197
125 Ga0265339_10013842 3300031249 Bacteria 4880
126 Ga0265339_10049912 3300031249 Unclassified 2289
127 Ga0265331_10027375 3300031250 Bacteria 2858
128 Ga0265327_10017141 3300031251 Bacteria 4559
129 Ga0265327_10025326 3300031251 Bacteria 3463
130 Ga0265327_10034420 3300031251 Bacteria 2811
131 Ga0265327_10072957 3300031251 Unclassified 1713
132 Ga0265316_10049470 3300031344 Bacteria 3311
133 Ga0265316_10102608 3300031344 Unclassified 2172
134 Ga0265316_10144650 3300031344 Bacteria 1783
135 Ga0265316_10611152 3300031344 Unclassified 772
136 Ga0265313_10007338 3300031595 Bacteria 7560
137 Ga0265314_10053131 3300031711 Bacteria 2811
138 Ga0265314_10078296 3300031711 Unclassified 2189
139 Ga0265342_10007821 3300031712 Bacteria 7767
140 Ga0265342_10211549 3300031712 Archaea 1048
141 Ga0395900_0007327 3300037418 Bacteria 11414
142 Ga0395898_0024873 3300037466 Bacteria 6037
143 Ga0501031_0000077 3300049568 Bacteria 51667
144 Ga0501032_0001075 3300049569 Bacteria 21871
145 Ga0501034_0001468 3300049571 Bacteria 31240
146 Ga0501037_0000329 3300049573 Bacteria 40132
147 Ga0501038_0071857 3300049574 Bacteria 2934
148 Ga0501042_0041215 3300049578 Bacteria 3283
149 Ga0501043_0000182 3300049579 Bacteria 56595
150 Ga0501046_0000061 3300049580 Bacteria 120487
151 Ga0501047_0000676 3300049581 Bacteria 35513
152 Ga0501048_0000024 3300049582 Bacteria 67807
153 Ga0501070_0019084 3300049586 Bacteria 5752
154 Ga0501073_0076290 3300049589 Unclassified 2332
155 Ga0501083_0018790 3300049744 Bacteria 4814
156 Ga0501035_0000956 3300049822 Bacteria 30555
157 nmdc:mga07m45_1636_c1 3300050496 Bacteria 10311
158 nmdc:mga0sz30_128398_c1 3300050516 Bacteria 1116
159 nmdc:mga0sz30_2_c1 3300050516 Bacteria 626403
160 Ga0500555_000001 3300053103 Bacteria 1353713
161 Ga0500555_070768 3300053103 Unclassified 921
162 Ga0500562_000002 3300053108 Bacteria 977234
163 Ga0500614_000001 3300053123 Bacteria 1274484
164 Ga0500603_005060 3300053150 Bacteria 2828
165 Ga0500616_0000005 3300053153 Bacteria 961725
166 Ga0501082_0514465 3300060353 Bacteria 1046

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300006358 Ga0068871_100104489 Ga0068871_1001044893 183
2 3300013307 Ga0157372_10212711 Ga0157372_102127112 186
3 3300009093 Ga0105240_11484867 Ga0105240_114848671 187
4 3300025924 Ga0207694_10125390 Ga0207694_101253902 187
5 3300028573 Ga0265334_10043231 Ga0265334_100432312 188
6 3300028654 Ga0265322_10034787 Ga0265322_100347872 188
7 3300028800 Ga0265338_10007039 Ga0265338_100070398 188
8 3300029957 Ga0265324_10005382 Ga0265324_100053825 188
9 3300031249 Ga0265339_10013842 Ga0265339_100138423 188
10 3300031251 Ga0265327_10017141 Ga0265327_100171413 188
11 3300031344 Ga0265316_10049470 Ga0265316_100494704 188
12 3300005331 Ga0070670_100820083 Ga0070670_1008200831 189
13 3300028800 Ga0265338_10023807 Ga0265338_100238071 189
14 3300031240 Ga0265320_10120361 Ga0265320_101203612 189
15 3300005563 Ga0068855_100164232 Ga0068855_1001642322 190
16 3300025949 Ga0207667_10014341 Ga0207667_100143417 190
17 3300013105 Ga0157369_10011081 Ga0157369_1001108112 191
18 3300005458 Ga0070681_10779070 Ga0070681_107790701 193
19 3300005546 Ga0070696_100139365 Ga0070696_1001393652 193
20 3300028556 Ga0265337_1000264 Ga0265337_100026429 194
21 3300028556 Ga0265337_1067979 Ga0265337_10679792 194
22 3300028558 Ga0265326_10010107 Ga0265326_100101072 194
23 3300028573 Ga0265334_10000039 Ga0265334_1000003999 194
24 3300028800 Ga0265338_10000003 Ga0265338_10000003725 194
25 3300028800 Ga0265338_10005849 Ga0265338_1000584923 194
26 3300031251 Ga0265327_10025326 Ga0265327_100253265 194
27 3300009093 Ga0105240_10243895 Ga0105240_102438952 195
28 3300009174 Ga0105241_10299214 Ga0105241_102992142 195
29 3300005329 Ga0070683_100061846 Ga0070683_1000618466 196
30 3300025923 Ga0207681_10186990 Ga0207681_101869902 196
31 3300025944 Ga0207661_10059918 Ga0207661_100599186 196
32 3300028800 Ga0265338_10273555 Ga0265338_102735551 197
33 3300037418 Ga0395900_0007327 Ga0395900_0007327_10163_10759 198
34 3300037466 Ga0395898_0024873 Ga0395898_0024873_3700_4296 198
35 3300006186 Ga0075369_10138623 Ga0075369_101386231 206
36 3300050516 nmdc:mga0sz30_128398_c1 nmdc:mga0sz30_128398_c1_125_745 206
37 3300003320 rootH2_10300530 rootH2_103005304 207
38 3300005335 Ga0070666_10172667 Ga0070666_101726672 207
39 3300005347 Ga0070668_100047448 Ga0070668_1000474483 207
40 3300005347 Ga0070668_100262245 Ga0070668_1002622452 207
41 3300005353 Ga0070669_100282950 Ga0070669_1002829502 207
42 3300005367 Ga0070667_100067605 Ga0070667_1000676053 207
43 3300005530 Ga0070679_100112014 Ga0070679_1001120144 207
44 3300005842 Ga0068858_100006886 Ga0068858_10000688615 207
45 3300005842 Ga0068858_100251730 Ga0068858_1002517301 207
46 3300005843 Ga0068860_100011983 Ga0068860_1000119836 207
47 3300005844 Ga0068862_100378815 Ga0068862_1003788152 207
48 3300005985 Ga0081539_10100569 Ga0081539_101005692 207
49 3300009174 Ga0105241_10162783 Ga0105241_101627832 207
50 3300009177 Ga0105248_10011514 Ga0105248_1001151412 207
51 3300009553 Ga0105249_11181455 Ga0105249_111814551 207
52 3300013307 Ga0157372_10960358 Ga0157372_109603581 207
53 3300014325 Ga0163163_10002696 Ga0163163_1000269618 207
54 3300014325 Ga0163163_10003384 Ga0163163_100033844 207
55 3300025911 Ga0207654_10094880 Ga0207654_100948802 207
56 3300025911 Ga0207654_10531963 Ga0207654_105319631 207
57 3300025924 Ga0207694_10002441 Ga0207694_1000244115 207
58 3300025941 Ga0207711_10073203 Ga0207711_100732032 207
59 3300025961 Ga0207712_10717753 Ga0207712_107177532 207
60 3300025972 Ga0207668_10015287 Ga0207668_100152876 207
61 3300025986 Ga0207658_10064943 Ga0207658_100649433 207
62 3300026035 Ga0207703_10024856 Ga0207703_100248563 207
63 3300028380 Ga0268265_10094944 Ga0268265_100949442 207
64 3300028380 Ga0268265_10681290 Ga0268265_106812902 207
65 3300049568 Ga0501031_0000077 Ga0501031_0000077_24077_24700 207
66 3300049569 Ga0501032_0001075 Ga0501032_0001075_14351_14974 207
67 3300049571 Ga0501034_0001468 Ga0501034_0001468_3890_4513 207
68 3300049573 Ga0501037_0000329 Ga0501037_0000329_15142_15765 207
69 3300049574 Ga0501038_0071857 Ga0501038_0071857_602_1225 207
70 3300049578 Ga0501042_0041215 Ga0501042_0041215_2016_2639 207
71 3300049579 Ga0501043_0000182 Ga0501043_0000182_31677_32300 207
72 3300049580 Ga0501046_0000061 Ga0501046_0000061_108639_109262 207
73 3300049581 Ga0501047_0000676 Ga0501047_0000676_26749_27372 207
74 3300049582 Ga0501048_0000024 Ga0501048_0000024_18525_19148 207
75 3300049586 Ga0501070_0019084 Ga0501070_0019084_3456_4079 207
76 3300049589 Ga0501073_0076290 Ga0501073_0076290_1652_2275 207
77 3300049744 Ga0501083_0018790 Ga0501083_0018790_238_861 207
78 3300049822 Ga0501035_0000956 Ga0501035_0000956_11547_12170 207
79 3300053103 Ga0500555_070768 Ga0500555_070768_92_715 207
80 3300053150 Ga0500603_005060 Ga0500603_005060_1457_2080 207
81 3300053153 Ga0500616_0000005 Ga0500616_0000005_731919_732542 207
82 3300060353 Ga0501082_0514465 Ga0501082_0514465_26_649 207
83 3300001915 JGI24741J21665_1000060 JGI24741J21665_100006012 208
84 3300001979 JGI24740J21852_10001472 JGI24740J21852_100014723 208
85 3300005329 Ga0070683_100259361 Ga0070683_1002593613 208
86 3300005329 Ga0070683_100339486 Ga0070683_1003394862 208
87 3300005336 Ga0070680_100708269 Ga0070680_1007082691 208
88 3300005337 Ga0070682_100139225 Ga0070682_1001392252 208
89 3300005355 Ga0070671_100233393 Ga0070671_1002333931 208
90 3300005435 Ga0070714_100012012 Ga0070714_1000120125 208
91 3300005458 Ga0070681_10328655 Ga0070681_103286551 208
92 3300005530 Ga0070679_100129176 Ga0070679_1001291762 208
93 3300005530 Ga0070679_100135420 Ga0070679_1001354203 208
94 3300005530 Ga0070679_100286459 Ga0070679_1002864593 208
95 3300005535 Ga0070684_100096368 Ga0070684_1000963683 208
96 3300005539 Ga0068853_100052377 Ga0068853_1000523772 208
97 3300005539 Ga0068853_100316780 Ga0068853_1003167801 208
98 3300005563 Ga0068855_100062955 Ga0068855_1000629555 208
99 3300005577 Ga0068857_100024864 Ga0068857_1000248646 208
100 3300005616 Ga0068852_100479125 Ga0068852_1004791252 208
101 3300005840 Ga0068870_10317093 Ga0068870_103170932 208
102 3300006186 Ga0075369_10000004 Ga0075369_10000004163 208
103 3300006195 Ga0075366_10156294 Ga0075366_101562942 208
104 3300006881 Ga0068865_100852711 Ga0068865_1008527111 208
105 3300009093 Ga0105240_10095074 Ga0105240_100950742 208
106 3300009098 Ga0105245_10000096 Ga0105245_1000009679 208
107 3300009174 Ga0105241_10058445 Ga0105241_100584452 208
108 3300009174 Ga0105241_10245199 Ga0105241_102451992 208
109 3300009545 Ga0105237_10127373 Ga0105237_101273734 208
110 3300009551 Ga0105238_10331799 Ga0105238_103317991 208
111 3300010375 Ga0105239_10905927 Ga0105239_109059272 208
112 3300013104 Ga0157370_10195532 Ga0157370_101955322 208
113 3300013104 Ga0157370_10275029 Ga0157370_102750293 208
114 3300013296 Ga0157374_10000014 Ga0157374_10000014419 208
115 3300013296 Ga0157374_10328274 Ga0157374_103282742 208
116 3300025912 Ga0207707_10093560 Ga0207707_100935603 208
117 3300025912 Ga0207707_10112580 Ga0207707_101125803 208
118 3300025913 Ga0207695_10236846 Ga0207695_102368462 208
119 3300025917 Ga0207660_10018239 Ga0207660_100182394 208
120 3300025919 Ga0207657_10163991 Ga0207657_101639913 208
121 3300025920 Ga0207649_10026523 Ga0207649_100265233 208
122 3300025921 Ga0207652_10014617 Ga0207652_100146176 208
123 3300025921 Ga0207652_10278757 Ga0207652_102787573 208
124 3300025924 Ga0207694_10566834 Ga0207694_105668341 208
125 3300025927 Ga0207687_10000008 Ga0207687_10000008419 208
126 3300025929 Ga0207664_10004400 Ga0207664_100044005 208
127 3300025944 Ga0207661_10063285 Ga0207661_100632854 208
128 3300025944 Ga0207661_10303333 Ga0207661_103033332 208
129 3300025949 Ga0207667_10012418 Ga0207667_100124189 208
130 3300025949 Ga0207667_10092594 Ga0207667_100925943 208
131 3300026041 Ga0207639_10019687 Ga0207639_100196874 208
132 3300026041 Ga0207639_10673804 Ga0207639_106738042 208
133 3300026116 Ga0207674_10007247 Ga0207674_100072476 208
134 3300026116 Ga0207674_10095282 Ga0207674_100952825 208
135 3300026142 Ga0207698_10060443 Ga0207698_100604433 208
136 3300026142 Ga0207698_10127420 Ga0207698_101274203 208
137 3300028563 Ga0265319_1023327 Ga0265319_10233273 208
138 3300028573 Ga0265334_10002962 Ga0265334_100029629 208
139 3300028577 Ga0265318_10004835 Ga0265318_100048353 208
140 3300028654 Ga0265322_10012430 Ga0265322_100124302 208
141 3300028800 Ga0265338_10040371 Ga0265338_100403713 208
142 3300028800 Ga0265338_10042370 Ga0265338_100423703 208
143 3300028800 Ga0265338_10129038 Ga0265338_101290382 208
144 3300028800 Ga0265338_10180186 Ga0265338_101801862 208
145 3300029957 Ga0265324_10005268 Ga0265324_100052683 208
146 3300031241 Ga0265325_10045868 Ga0265325_100458682 208
147 3300031241 Ga0265325_10101868 Ga0265325_101018682 208
148 3300031242 Ga0265329_10024282 Ga0265329_100242823 208
149 3300031249 Ga0265339_10004760 Ga0265339_1000476018 208
150 3300031249 Ga0265339_10049912 Ga0265339_100499123 208
151 3300031250 Ga0265331_10027375 Ga0265331_100273752 208
152 3300031251 Ga0265327_10034420 Ga0265327_100344203 208
153 3300031251 Ga0265327_10072957 Ga0265327_100729573 208
154 3300031344 Ga0265316_10102608 Ga0265316_101026083 208
155 3300031344 Ga0265316_10144650 Ga0265316_101446502 208
156 3300031344 Ga0265316_10611152 Ga0265316_106111522 208
157 3300031595 Ga0265313_10007338 Ga0265313_100073388 208
158 3300031711 Ga0265314_10053131 Ga0265314_100531313 208
159 3300031711 Ga0265314_10078296 Ga0265314_100782962 208
160 3300031712 Ga0265342_10007821 Ga0265342_100078212 208
161 3300031712 Ga0265342_10211549 Ga0265342_102115492 208
162 3300050496 nmdc:mga07m45_1636_c1 nmdc:mga07m45_1636_c1_3836_4477 208
163 3300050516 nmdc:mga0sz30_2_c1 nmdc:mga0sz30_2_c1_77077_77703 208
164 3300053103 Ga0500555_000001 Ga0500555_000001_15045_15671 208
165 3300053108 Ga0500562_000002 Ga0500562_000002_264166_264792 208
166 3300053123 Ga0500614_000001 Ga0500614_000001_1042182_1042808 208

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13483

Lactamase_B_3

Beta-lactamase superfamily domain

2

155

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
1vjn-assembly2.cif.gz_B crystal structure of a putative zn-dependent hydrolase of the metallo-beta-lactamase superfamily (tm0207) from thermotoga maritima at 2.00 a resolution 0.8723 1 205
1vjn-assembly2.cif.gz_B crystal structure of a putative zn-dependent hydrolase of the metallo-beta-lactamase superfamily (tm0207) from thermotoga maritima at 2.00 a resolution 0.8552 1 205
1vjn-assembly1.cif.gz_A crystal structure of a putative zn-dependent hydrolase of the metallo-beta-lactamase superfamily (tm0207) from thermotoga maritima at 2.00 a resolution 0.8527 2 205
1vjn-assembly1.cif.gz_A crystal structure of a putative zn-dependent hydrolase of the metallo-beta-lactamase superfamily (tm0207) from thermotoga maritima at 2.00 a resolution 0.8281 2 205
6brm-assembly4.cif.gz_H the crystal structure of isothiocyanate hydrolase from delia radicum gut bacteria 0.7154 1 176
ID Description Score Start End Superfamily
1vjnB00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8657 1 206 3.60.15.10
1vjnB00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8613 1 206 3.60.15.10
af_Q2FXM0_1_229_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7518 1 178 3.60.15.10
6brmH00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7154 1 176 3.60.15.10
af_Q4DTW2_3_265_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7022 55 109 3.60.15.10
ID Description Score Start End GO Terms
AF-A0A7C3PDG9-F1-model_v4 Zn-dependent hydrolase 0.994 1 208
AF-A0A1F7R1W0-F1-model_v4 Zn-dependent hydrolase 0.9878 1 208
AF-A0A6M5FCQ1-F1-model_v4 Zn-dependent hydrolase 0.965 2 208 GO:0016787
AF-A0A1F7R330-F1-model_v4 Uncharacterized protein 0.9639 1 152
AF-A0A1F7QNV0-F1-model_v4 Zn-dependent hydrolase 0.962 1 208

Feature Viewer

pLDDT pTM Quality
93.61 0.92 High
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Predicted Structure (AlphaFold2)

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