F247149

General Info

Members Datasets Scaffolds Average Seq Length
165 113 165 304

Family's Representative Sequence

Representative Sequence 3300049589|Ga0501073_0211897|Ga0501073_0211897_318_1283
Length 321
Sequence MTRGERFKRWLITLRRIIRSGCLNFVRNAWLSIAAMAVMLITLTIVLFSIIANATFSNTIQQITDKIDISVYLKDNIKNEQKDSLISDLKSQSNVKEVDYRSKEQAKEDFQKSNQGNTGLQQAIASLDDNPIPATIHIKPKDPNQIGSIKTFLESDKVKALQAKETSYSGQRQEAVDNITHATNFMRKAGVVGVLVFAVVSMLIIFNTIQMAIFNRRDELTIMRLLGASTWFIRGPFVVESILYGIFAAVISVVLLNGLFAVSSSTLQASSLGLLDINYANEYFANHFWLFLTLQLTIGIFIGAASSIIATRRYLKFKAIK

Samples

Sample ID Description Type Environment
1 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
17 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
18 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
19 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
20 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
23 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
24 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
25 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
26 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
33 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
34 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
35 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
38 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
39 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
40 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
53 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
54 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
56 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
57 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
58 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
59 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
60 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
61 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
62 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
63 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
64 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
65 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
66 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
67 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
69 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
79 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
80 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
81 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
82 3300049773 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_B_4_control Metagenome Rhizosphere
83 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
85 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
86 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
87 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
88 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
89 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
90 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
91 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
92 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
93 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
94 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
95 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
96 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
97 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
98 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
99 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
100 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
101 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
102 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
103 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
104 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
105 3300053126 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 endosphere Metagenome Endosphere
106 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
107 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
108 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
109 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
110 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
111 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
112 3300053722 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 endosphere Metagenome Endosphere
113 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 41.82
Nodule 0
Rhizoplane 0
Rhizosphere 55.76
Stem 0
Stem Tuber 0
Unclassified 2.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1000674 3300001915 Bacteria 10264
2 JGI24740J21852_10013350 3300001979 Bacteria 3066
3 JGI24737J22298_10000002 3300001990 Bacteria 76949
4 JGI24735J21928_10000042 3300002067 Bacteria 58971
5 rootH2_10078746 3300003320 Bacteria 3138
6 rootH2_10078747 3300003320 Bacteria 1922
7 rootL2_10144599 3300003322 Bacteria 5328
8 rootH1_10281768 3300003323 Bacteria 1747
9 JGI25405J52794_10003195 3300003911 Bacteria 2854
10 Ga0070683_100000130 3300005329 Bacteria 48482
11 Ga0070690_100003312 3300005330 Bacteria 8790
12 Ga0070668_100099717 3300005347 Bacteria 2300
13 Ga0070668_100167595 3300005347 Unclassified 1786
14 Ga0070667_100067909 3300005367 Bacteria 3033
15 Ga0070684_100000623 3300005535 Bacteria 24450
16 Ga0068855_100000003 3300005563 Bacteria 589862
17 Ga0068855_100003265 3300005563 Bacteria 19847
18 Ga0068855_100070845 3300005563 Bacteria 4055
19 Ga0068855_100620420 3300005563 Unclassified 1164
20 Ga0068856_100000001 3300005614 Bacteria 565602
21 Ga0068860_100024465 3300005843 Bacteria 5834
22 Ga0081455_10000003 3300005937 Bacteria 367763
23 Ga0075365_10000021 3300006038 Bacteria 64483
24 Ga0075365_10097395 3300006038 Bacteria 2011
25 Ga0075368_10000062 3300006042 Bacteria 25855
26 Ga0075368_10070685 3300006042 Bacteria 1409
27 Ga0075363_100000019 3300006048 Bacteria 34359
28 Ga0075364_10004988 3300006051 Bacteria 7695
29 Ga0075364_10015359 3300006051 Unclassified 4747
30 Ga0075364_10031430 3300006051 Bacteria 3411
31 Ga0075364_10092373 3300006051 Bacteria 2009
32 Ga0075362_10000052 3300006177 Bacteria 37626
33 Ga0075362_10011514 3300006177 Bacteria 3487
34 Ga0075367_10000012 3300006178 Bacteria 42001
35 Ga0075367_10003115 3300006178 Bacteria 7802
36 Ga0075369_10000042 3300006186 Bacteria 33379
37 Ga0075369_10035836 3300006186 Bacteria 2110
38 Ga0075366_10000001 3300006195 Bacteria 569172
39 Ga0075366_10000011 3300006195 Bacteria 79037
40 Ga0075366_10000959 3300006195 Bacteria 14075
41 Ga0075366_10002255 3300006195 Bacteria 9851
42 Ga0075366_10003146 3300006195 Bacteria 8640
43 Ga0075370_10000866 3300006353 Bacteria 12318
44 Ga0075370_10007565 3300006353 Bacteria 5539
45 Ga0075428_100016057 3300006844 Bacteria 8280
46 Ga0075430_100042755 3300006846 Bacteria 3831
47 Ga0105240_10172280 3300009093 Bacteria 2562
48 Ga0105240_10436470 3300009093 Unclassified 1468
49 Ga0111539_10000492 3300009094 Bacteria 50138
50 Ga0105245_10037151 3300009098 Bacteria 4329
51 Ga0105241_10000007 3300009174 Bacteria 343524
52 Ga0105242_10028406 3300009176 Bacteria 4453
53 Ga0105249_10004977 3300009553 Bacteria 11464
54 Ga0105249_10131313 3300009553 Bacteria 2391
55 Ga0105249_10285541 3300009553 Unclassified 1650
56 Ga0105033_100130 3300009986 Bacteria 5758
57 Ga0157369_10000104 3300013105 Bacteria 118133
58 Ga0157378_10142089 3300013297 Bacteria 2230
59 Ga0163163_10000200 3300014325 Bacteria 61946
60 Ga0163163_10008888 3300014325 Bacteria 8946
61 Ga0163163_10017975 3300014325 Bacteria 6605
62 Ga0157380_10160600 3300014326 Bacteria 1953
63 Ga0207705_10000104 3300025909 Bacteria 96668
64 Ga0207654_10000002 3300025911 Bacteria 1460142
65 Ga0207681_10137935 3300025923 Bacteria 1813
66 Ga0207687_10054432 3300025927 Bacteria 2799
67 Ga0207711_10084272 3300025941 Bacteria 2782
68 Ga0207661_10000118 3300025944 Bacteria 50730
69 Ga0207667_10000008 3300025949 Bacteria 625138
70 Ga0207667_10003751 3300025949 Bacteria 18715
71 Ga0207667_10058970 3300025949 Bacteria 4023
72 Ga0207667_10350834 3300025949 Bacteria 1505
73 Ga0207712_10064727 3300025961 Bacteria 2608
74 Ga0207668_10153456 3300025972 Unclassified 1786
75 Ga0207668_10181306 3300025972 Bacteria 1661
76 Ga0207703_10004230 3300026035 Bacteria 11826
77 Ga0207708_10119563 3300026075 Bacteria 2052
78 Ga0207702_10000062 3300026078 Bacteria 124850
79 Ga0209813_10000002 3300027866 Bacteria 215993
80 Ga0209813_10047774 3300027866 Bacteria 1326
81 Ga0207428_10031187 3300027907 Bacteria 4402
82 Ga0268264_10033265 3300028381 Bacteria 4234
83 Ga0265319_1002291 3300028563 Bacteria 10563
84 Ga0265338_10000891 3300028800 Bacteria 50269
85 Ga0265338_10016351 3300028800 Bacteria 8079
86 Ga0265338_10026857 3300028800 Bacteria 5793
87 Ga0265338_10035468 3300028800 Bacteria 4794
88 Ga0265327_10003876 3300031251 Bacteria 13782
89 Ga0265327_10016060 3300031251 Bacteria 4786
90 Ga0265327_10023282 3300031251 Bacteria 3672
91 Ga0265316_10095735 3300031344 Bacteria 2261
92 Ga0395900_0015980 3300037418 Bacteria 7649
93 Ga0495629_0051043 3300046459 Bacteria 2895
94 Ga0495609_0127200 3300046538 Bacteria 1093
95 Ga0495622_0000051 3300046557 Bacteria 105674
96 Ga0495588_0000173 3300046674 Bacteria 81355
97 Ga0495658_0011473 3300046683 Bacteria 4459
98 Ga0495649_0000069 3300046694 Bacteria 90066
99 Ga0495593_0083436 3300047673 Bacteria 1651
100 Ga0501031_0001257 3300049568 Bacteria 15525
101 Ga0501032_0001296 3300049569 Bacteria 20042
102 Ga0501034_0054932 3300049571 Bacteria 4008
103 Ga0501036_0013424 3300049572 Bacteria 6806
104 Ga0501037_0000141 3300049573 Bacteria 67142
105 Ga0501038_0034445 3300049574 Bacteria 4452
106 Ga0501042_0096853 3300049578 Bacteria 2120
107 Ga0501043_0000145 3300049579 Bacteria 65943
108 Ga0501046_0000065 3300049580 Bacteria 116095
109 Ga0501047_0000375 3300049581 Bacteria 50494
110 Ga0501048_0000133 3300049582 Bacteria 44300
111 Ga0501070_0026381 3300049586 Bacteria 4875
112 Ga0501073_0024041 3300049589 Bacteria 4376
113 Ga0501073_0211897 3300049589 Bacteria 1339
114 Ga0501080_0000893 3300049742 Bacteria 24429
115 Ga0501083_0017659 3300049744 Bacteria 4974
116 Ga0501276_000811 3300049773 Bacteria 1989
117 Ga0501035_0004250 3300049822 Bacteria 13597
118 Ga0501044_0046803 3300049823 Bacteria 4477
119 nmdc:mga03683_114_c3 3300050489 Bacteria 21413
120 nmdc:mga03683_724_c1 3300050489 Bacteria 9442
121 nmdc:mga03n38_216281_c1 3300050490 Bacteria 998
122 nmdc:mga03n38_33_c1 3300050490 Bacteria 30986
123 nmdc:mga00v17_11804_c1 3300050491 Bacteria 4807
124 nmdc:mga00v17_127994_c1 3300050491 Bacteria 1621
125 nmdc:mga00v17_25497_c1 3300050491 Bacteria 3437
126 nmdc:mga00v17_67780_c1 3300050491 Bacteria 2205
127 nmdc:mga0yw44_13_c1 3300050492 Bacteria 120183
128 nmdc:mga0yw44_92574_c1 3300050492 Bacteria 1913
129 nmdc:mga0k408_179_c1 3300050493 Bacteria 33243
130 nmdc:mga0k408_1961_c2 3300050493 Bacteria 9850
131 nmdc:mga0k408_1_c1 3300050493 Bacteria 1089059
132 nmdc:mga0k408_2493_c1 3300050493 Bacteria 9792
133 nmdc:mga0k408_3268_c1 3300050493 Bacteria 8575
134 nmdc:mga0k408_9157_c1 3300050493 Bacteria 1806
135 nmdc:mga06z11_31_c1 3300050494 Bacteria 57393
136 nmdc:mga06z11_74_c1 3300050494 Bacteria 42014
137 nmdc:mga04h51_2_c1 3300050495 Bacteria 215993
138 nmdc:mga04h51_48456_c1 3300050495 Bacteria 1416
139 nmdc:mga07m45_14997_c1 3300050496 Bacteria 4137
140 nmdc:mga07m45_729_c1 3300050496 Bacteria 10864
141 nmdc:mga0qj67_13114_c1 3300050509 Bacteria 6259
142 nmdc:mga08y16_2629_c1 3300050511 Bacteria 18453
143 nmdc:mga0sz30_12962_c1 3300050516 Bacteria 3255
144 nmdc:mga0sz30_1_c1 3300050516 Bacteria 796501
145 nmdc:mga0sz30_4_c1 3300050516 Bacteria 84956
146 Ga0500610_0123508 3300053079 Bacteria 1322
147 Ga0500643_000011 3300053087 Bacteria 385630
148 Ga0500643_006494 3300053087 Bacteria 4873
149 Ga0500644_0001954 3300053088 Bacteria 5259
150 Ga0500583_0000057 3300053092 Bacteria 71874
151 Ga0500566_0000001 3300053094 Bacteria 1101031
152 Ga0500555_000001 3300053103 Bacteria 1353713
153 Ga0500562_000002 3300053108 Bacteria 977234
154 Ga0500593_000001 3300053117 Bacteria 784404
155 Ga0500614_000001 3300053123 Bacteria 1274484
156 Ga0500614_003751 3300053123 Bacteria 3253
157 Ga0500621_000694 3300053126 Bacteria 6546
158 Ga0500628_000009 3300053129 Bacteria 122386
159 Ga0500642_0002595 3300053130 Bacteria 5340
160 Ga0500559_0009237 3300053136 Bacteria 4279
161 Ga0500577_0000357 3300053142 Bacteria 11677
162 Ga0500589_000002 3300053147 Bacteria 245055
163 Ga0500616_0000005 3300053153 Bacteria 961725
164 Ga0500649_000002 3300053722 Bacteria 145889
165 Ga0500570_000003 3300053724 Bacteria 149500

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300014326 Ga0157380_10160600 Ga0157380_101606002 257
2 3300050490 nmdc:mga03n38_216281_c1 nmdc:mga03n38_216281_c1_65_919 284
3 3300050493 nmdc:mga0k408_9157_c1 nmdc:mga0k408_9157_c1_908_1765 285
4 3300006042 Ga0075368_10000062 Ga0075368_1000006225 286
5 3300006048 Ga0075363_100000019 Ga0075363_10000001930 286
6 3300006178 Ga0075367_10003115 Ga0075367_100031154 286
7 3300006353 Ga0075370_10000866 Ga0075370_1000086611 286
8 3300014325 Ga0163163_10008888 Ga0163163_100088886 286
9 3300027866 Ga0209813_10000002 Ga0209813_10000002110 286
10 3300050490 nmdc:mga03n38_33_c1 nmdc:mga03n38_33_c1_27403_28347 286
11 3300050494 nmdc:mga06z11_31_c1 nmdc:mga06z11_31_c1_47774_48718 286
12 3300050495 nmdc:mga04h51_2_c1 nmdc:mga04h51_2_c1_114528_115472 286
13 3300050496 nmdc:mga07m45_14997_c1 nmdc:mga07m45_14997_c1_3149_4093 286
14 3300053724 Ga0500570_000003 Ga0500570_000003_141271_142215 286
15 3300005563 Ga0068855_100070845 Ga0068855_1000708453 288
16 3300025949 Ga0207667_10058970 Ga0207667_100589703 288
17 3300031251 Ga0265327_10023282 Ga0265327_100232822 288
18 3300005329 Ga0070683_100000130 Ga0070683_10000013026 289
19 3300005535 Ga0070684_100000623 Ga0070684_1000006232 289
20 3300025944 Ga0207661_10000118 Ga0207661_1000011832 289
21 3300001990 JGI24737J22298_10000002 JGI24737J22298_1000000242 291
22 3300002067 JGI24735J21928_10000042 JGI24735J21928_1000004219 291
23 3300014325 Ga0163163_10000200 Ga0163163_1000020044 291
24 3300053117 Ga0500593_000001 Ga0500593_000001_353533_354489 291
25 3300005330 Ga0070690_100003312 Ga0070690_1000033122 292
26 3300005563 Ga0068855_100000003 Ga0068855_100000003590 294
27 3300009174 Ga0105241_10000007 Ga0105241_1000000777 294
28 3300013105 Ga0157369_10000104 Ga0157369_1000010453 294
29 3300025911 Ga0207654_10000002 Ga0207654_100000021469 294
30 3300025949 Ga0207667_10000008 Ga0207667_10000008580 294
31 3300003911 JGI25405J52794_10003195 JGI25405J52794_100031953 296
32 3300005563 Ga0068855_100003265 Ga0068855_10000326517 296
33 3300005937 Ga0081455_10000003 Ga0081455_1000000335 296
34 3300025949 Ga0207667_10003751 Ga0207667_1000375117 296
35 3300053079 Ga0500610_0123508 Ga0500610_0123508_293_1231 296
36 3300053092 Ga0500583_0000057 Ga0500583_0000057_50500_51438 296
37 3300053126 Ga0500621_000694 Ga0500621_000694_3139_4077 296
38 3300053130 Ga0500642_0002595 Ga0500642_0002595_105_1043 296
39 3300053147 Ga0500589_000002 Ga0500589_000002_121572_122510 296
40 3300003320 rootH2_10078746 rootH2_100787464 297
41 3300003320 rootH2_10078747 rootH2_100787472 297
42 3300009093 Ga0105240_10172280 Ga0105240_101722802 297
43 3300050511 nmdc:mga08y16_2629_c1 nmdc:mga08y16_2629_c1_13822_14715 297
44 3300005563 Ga0068855_100620420 Ga0068855_1006204202 298
45 3300009093 Ga0105240_10436470 Ga0105240_104364702 298
46 3300009986 Ga0105033_100130 Ga0105033_1001305 298
47 3300025949 Ga0207667_10350834 Ga0207667_103508342 298
48 3300053103 Ga0500555_000001 Ga0500555_000001_1230312_1231208 298
49 3300009553 Ga0105249_10131313 Ga0105249_101313132 299
50 3300006051 Ga0075364_10031430 Ga0075364_100314304 300
51 3300006177 Ga0075362_10011514 Ga0075362_100115142 300
52 3300006186 Ga0075369_10000042 Ga0075369_1000004211 300
53 3300046694 Ga0495649_0000069 Ga0495649_0000069_34878_35822 300
54 3300050492 nmdc:mga0yw44_13_c1 nmdc:mga0yw44_13_c1_32489_33418 300
55 3300050516 nmdc:mga0sz30_1_c1 nmdc:mga0sz30_1_c1_742168_743106 300
56 3300049568 Ga0501031_0001257 Ga0501031_0001257_2215_3159 301
57 3300049569 Ga0501032_0001296 Ga0501032_0001296_2950_3894 301
58 3300049571 Ga0501034_0054932 Ga0501034_0054932_28_972 301
59 3300049572 Ga0501036_0013424 Ga0501036_0013424_1636_2580 301
60 3300049573 Ga0501037_0000141 Ga0501037_0000141_22437_23381 301
61 3300049574 Ga0501038_0034445 Ga0501038_0034445_133_1077 301
62 3300049578 Ga0501042_0096853 Ga0501042_0096853_1142_2086 301
63 3300049579 Ga0501043_0000145 Ga0501043_0000145_39884_40828 301
64 3300049580 Ga0501046_0000065 Ga0501046_0000065_94912_95856 301
65 3300049581 Ga0501047_0000375 Ga0501047_0000375_37381_38325 301
66 3300049582 Ga0501048_0000133 Ga0501048_0000133_26839_27783 301
67 3300049586 Ga0501070_0026381 Ga0501070_0026381_2917_3861 301
68 3300049589 Ga0501073_0024041 Ga0501073_0024041_311_1255 301
69 3300049822 Ga0501035_0004250 Ga0501035_0004250_1164_2108 301
70 3300049823 Ga0501044_0046803 Ga0501044_0046803_2201_3145 301
71 3300006186 Ga0075369_10035836 Ga0075369_100358362 302
72 3300050516 nmdc:mga0sz30_12962_c1 nmdc:mga0sz30_12962_c1_1125_2069 302
73 3300031251 Ga0265327_10016060 Ga0265327_100160602 303
74 3300006038 Ga0075365_10000021 Ga0075365_1000002153 304
75 3300006051 Ga0075364_10004988 Ga0075364_100049883 304
76 3300006177 Ga0075362_10000052 Ga0075362_100000522 304
77 3300006353 Ga0075370_10007565 Ga0075370_100075652 304
78 3300049744 Ga0501083_0017659 Ga0501083_0017659_1360_2304 304
79 3300050489 nmdc:mga03683_114_c3 nmdc:mga03683_114_c3_505_1446 304
80 3300050489 nmdc:mga03683_724_c1 nmdc:mga03683_724_c1_5366_6307 304
81 3300050491 nmdc:mga00v17_11804_c1 nmdc:mga00v17_11804_c1_2648_3592 304
82 3300050491 nmdc:mga00v17_25497_c1 nmdc:mga00v17_25497_c1_2393_3334 304
83 3300050492 nmdc:mga0yw44_92574_c1 nmdc:mga0yw44_92574_c1_898_1839 304
84 3300050496 nmdc:mga07m45_729_c1 nmdc:mga07m45_729_c1_6546_7487 304
85 3300053123 Ga0500614_000001 Ga0500614_000001_1154087_1155031 305
86 3300026075 Ga0207708_10119563 Ga0207708_101195631 306
87 3300028800 Ga0265338_10026857 Ga0265338_100268573 306
88 3300013297 Ga0157378_10142089 Ga0157378_101420892 307
89 3300006844 Ga0075428_100016057 Ga0075428_1000160574 308
90 3300006846 Ga0075430_100042755 Ga0075430_1000427554 308
91 3300050509 nmdc:mga0qj67_13114_c1 nmdc:mga0qj67_13114_c1_1296_2240 308
92 3300006038 Ga0075365_10097395 Ga0075365_100973952 309
93 3300006042 Ga0075368_10070685 Ga0075368_100706852 309
94 3300006051 Ga0075364_10092373 Ga0075364_100923732 309
95 3300006178 Ga0075367_10000012 Ga0075367_1000001225 309
96 3300006195 Ga0075366_10000959 Ga0075366_100009599 309
97 3300027866 Ga0209813_10047774 Ga0209813_100477741 309
98 3300050493 nmdc:mga0k408_2493_c1 nmdc:mga0k408_2493_c1_5613_6557 309
99 3300050494 nmdc:mga06z11_74_c1 nmdc:mga06z11_74_c1_17231_18175 309
100 3300050495 nmdc:mga04h51_48456_c1 nmdc:mga04h51_48456_c1_396_1340 309
101 3300053153 Ga0500616_0000005 Ga0500616_0000005_602408_603340 310
102 3300028563 Ga0265319_1002291 Ga0265319_10022919 311
103 3300028800 Ga0265338_10016351 Ga0265338_100163512 311
104 3300031344 Ga0265316_10095735 Ga0265316_100957352 311
105 3300009094 Ga0111539_10000492 Ga0111539_1000049249 312
106 3300009553 Ga0105249_10004977 Ga0105249_100049779 312
107 3300025961 Ga0207712_10064727 Ga0207712_100647272 312
108 3300027907 Ga0207428_10031187 Ga0207428_100311873 312
109 3300003322 rootL2_10144599 rootL2_101445992 313
110 3300003323 rootH1_10281768 rootH1_102817682 313
111 3300005614 Ga0068856_100000001 Ga0068856_100000001606 313
112 3300006195 Ga0075366_10000001 Ga0075366_1000000167 313
113 3300006195 Ga0075366_10000011 Ga0075366_1000001134 313
114 3300006195 Ga0075366_10002255 Ga0075366_100022559 313
115 3300025909 Ga0207705_10000104 Ga0207705_100001049 313
116 3300026078 Ga0207702_10000062 Ga0207702_1000006254 313
117 3300046459 Ga0495629_0051043 Ga0495629_0051043_1008_1949 313
118 3300046538 Ga0495609_0127200 Ga0495609_0127200_18_959 313
119 3300046557 Ga0495622_0000051 Ga0495622_0000051_56705_57646 313
120 3300046674 Ga0495588_0000173 Ga0495588_0000173_78607_79548 313
121 3300046683 Ga0495658_0011473 Ga0495658_0011473_3398_4339 313
122 3300047673 Ga0495593_0083436 Ga0495593_0083436_52_993 313
123 3300050491 nmdc:mga00v17_67780_c1 nmdc:mga00v17_67780_c1_561_1502 313
124 3300050493 nmdc:mga0k408_179_c1 nmdc:mga0k408_179_c1_19927_20868 313
125 3300050493 nmdc:mga0k408_1961_c2 nmdc:mga0k408_1961_c2_6530_7471 313
126 3300050493 nmdc:mga0k408_1_c1 nmdc:mga0k408_1_c1_1012055_1012996 313
127 3300050516 nmdc:mga0sz30_4_c1 nmdc:mga0sz30_4_c1_74337_75278 313
128 3300053094 Ga0500566_0000001 Ga0500566_0000001_988728_989669 313
129 3300053123 Ga0500614_003751 Ga0500614_003751_1756_2697 313
130 3300053129 Ga0500628_000009 Ga0500628_000009_58450_59391 313
131 3300053136 Ga0500559_0009237 Ga0500559_0009237_1751_2692 313
132 3300053722 Ga0500649_000002 Ga0500649_000002_36784_37725 313
133 3300001915 JGI24741J21665_1000674 JGI24741J21665_10006743 314
134 3300001979 JGI24740J21852_10013350 JGI24740J21852_100133502 314
135 3300005347 Ga0070668_100099717 Ga0070668_1000997173 314
136 3300005347 Ga0070668_100167595 Ga0070668_1001675952 314
137 3300005367 Ga0070667_100067909 Ga0070667_1000679093 314
138 3300005843 Ga0068860_100024465 Ga0068860_1000244654 314
139 3300006051 Ga0075364_10015359 Ga0075364_100153594 314
140 3300006195 Ga0075366_10003146 Ga0075366_100031465 314
141 3300009098 Ga0105245_10037151 Ga0105245_100371514 314
142 3300009176 Ga0105242_10028406 Ga0105242_100284065 314
143 3300009553 Ga0105249_10285541 Ga0105249_102855412 314
144 3300014325 Ga0163163_10017975 Ga0163163_100179755 314
145 3300025923 Ga0207681_10137935 Ga0207681_101379352 314
146 3300025927 Ga0207687_10054432 Ga0207687_100544322 314
147 3300025941 Ga0207711_10084272 Ga0207711_100842722 314
148 3300025972 Ga0207668_10153456 Ga0207668_101534561 314
149 3300025972 Ga0207668_10181306 Ga0207668_101813061 314
150 3300026035 Ga0207703_10004230 Ga0207703_1000423012 314
151 3300028381 Ga0268264_10033265 Ga0268264_100332654 314
152 3300028800 Ga0265338_10000891 Ga0265338_1000089141 314
153 3300028800 Ga0265338_10035468 Ga0265338_100354683 314
154 3300031251 Ga0265327_10003876 Ga0265327_1000387613 314
155 3300037418 Ga0395900_0015980 Ga0395900_0015980_3140_4084 314
156 3300049589 Ga0501073_0211897 Ga0501073_0211897_318_1283 314
157 3300049742 Ga0501080_0000893 Ga0501080_0000893_11434_12399 314
158 3300049773 Ga0501276_000811 Ga0501276_000811_788_1732 314
159 3300050491 nmdc:mga00v17_127994_c1 nmdc:mga00v17_127994_c1_351_1295 314
160 3300050493 nmdc:mga0k408_3268_c1 nmdc:mga0k408_3268_c1_3129_4073 314
161 3300053087 Ga0500643_000011 Ga0500643_000011_283373_284317 314
162 3300053087 Ga0500643_006494 Ga0500643_006494_3228_4172 314
163 3300053088 Ga0500644_0001954 Ga0500644_0001954_1933_2877 314
164 3300053108 Ga0500562_000002 Ga0500562_000002_135884_136828 314
165 3300053142 Ga0500577_0000357 Ga0500577_0000357_1655_2599 314

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF18075

FtsX_ECD

FtsX extracellular domain

67

160

0.89

PF02687

FtsX

FtsX-like permease family

191

319

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
8i6q-assembly1.cif.gz_C cryo-em structure of pseudomonas aeruginosa ftse(wt)x complex in peptidisc 0.8569 169 309
6tpi-assembly1.cif.gz_B envc bound to the ftsx periplasmic domain 0.7321 61 157
4n8n-assembly3.cif.gz_C crystal structure of mycobacterial ftsx extracellular domain 0.7273 61 146
4n8n-assembly1.cif.gz_A crystal structure of mycobacterial ftsx extracellular domain 0.726 59 149
6a71-assembly1.cif.gz_B crystal structure of human atp7b and tm complex 0.7219 61 146
ID Description Score Start End Superfamily
af_Q55DN5_348_418_3.30.70.100 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.783 61 93 3.30.70.100
af_P9WG19_44_157_3.30.70.3040 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.7555 60 149 3.30.70.3040
af_P0AC30_96_208_3.30.70.3040 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.7548 62 160 3.30.70.3040
af_Q4DIX9_90_158_3.30.70.100 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.7478 61 133 3.30.70.100
6a71B00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.7219 61 146 3.30.70.100
ID Description Score Start End GO Terms
AF-A0A7C5GAJ5-F1-model_v4 Cell division protein FtsX 0.8926 5 310 GO:0005886
GO:0051301
AF-A0A660M6U4-F1-model_v4 Cell division protein FtsX 0.8883 2 310 GO:0005886
GO:0051301
AF-A0A7C5GAJ5-F1-model_v4 Cell division protein FtsX 0.887 5 310 GO:0005886
GO:0051301
AF-A0A7W4DFR9-F1-model_v4 Cell division protein FtsX 0.8737 2 310 GO:0005886
GO:0051301
AF-A0A7T9K7U7-F1-model_v4 deleted 0.8726 3 311

Feature Viewer

pLDDT pTM Quality
79.92 0.65 Medium
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map