F246212

General Info

Members Datasets Scaffolds Average Seq Length
165 105 330 418

Family's Representative Sequence

Representative Sequence 3300014326|Ga0157380_10098261|Ga0157380_100982611
Length 477
Sequence MSPVGPPGELARDTLQQTLGGEWRHQGAIRCFVVDRRTPPDAMCGGVRVAEIAGVLTCAAAHASLLTSAAPASPPFLFFDIETTGLSGGAGTYAFLVGCAWFCDDGAFLTRQYVLANHHDERPMLESVAGELARAGTLVTFNGKSFDAPVLEMRYMFHRLQWPGARLPHLDVLHPARLFWGTASARLKADTTNPAREASADHRRLVRLRAKRYGETSTKLEERSRGGGGYPDAAAESTPRSCSLLALEQQILGANREGDVPGFEIPARYFQFLRNGDARPLGAVFEHNRLDLLSLAGLTARLLQLLHDGPGKAQDAHEALALGRVYQRGGLDDRAVEAFERTMAMSGSLHESQAAPVRVDALRSLACAARRARRHHDAAACWRQLLDVPLCPRNTAREALEALAIHHEHRVRDLGAARTFALGSLNAANRTSASARARHRLARLERKLSGAPHKRADEDAALPMSPWFSGSSPIIAK

Samples

Sample ID Description Type Environment
1 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
11 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
53 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
69 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
71 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
72 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
73 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
74 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
75 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
76 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
77 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
78 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
79 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
80 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
81 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
82 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
83 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
84 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
85 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
86 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
87 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
88 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
89 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
90 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
91 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
92 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
93 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
94 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
95 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
96 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
99 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
100 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
101 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
102 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
103 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
104 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
105 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.64
Rhizosphere 96.36
Stem 0
Stem Tuber 0
Unclassified 7.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157380_10098261 3300014326 Bacteria 2432
2 Ga0070676_10001313 3300005328 Bacteria 12490
3 Ga0068869_100208535 3300005334 Bacteria 1544
4 Ga0068868_100179502 3300005338 Bacteria 1756
5 Ga0070691_10007518 3300005341 Bacteria 4994
6 Ga0070669_100017634 3300005353 Bacteria 5093
7 Ga0070669_100088943 3300005353 Bacteria 2312
8 Ga0070675_100000045 3300005354 Bacteria 76421
9 Ga0070675_100005742 3300005354 Bacteria 9491
10 Ga0070674_100030327 3300005356 Bacteria 3572
11 Ga0070673_100022070 3300005364 Bacteria 4628
12 Ga0070701_10010860 3300005438 Bacteria 4044
13 Ga0070705_100009847 3300005440 Bacteria 4768
14 Ga0070700_100018890 3300005441 Bacteria 3971
15 Ga0070694_100110285 3300005444 Bacteria 1959
16 Ga0070681_10011939 3300005458 Bacteria 8614
17 Ga0070706_100179235 3300005467 Bacteria 1978
18 Ga0070698_100289239 3300005471 Bacteria 1570
19 Ga0070699_100006555 3300005518 Bacteria 10132
20 Ga0070699_100050710 3300005518 Bacteria 3593
21 Ga0070679_100197626 3300005530 Bacteria 1978
22 Ga0070684_100108506 3300005535 Bacteria 2487
23 Ga0070696_100046904 3300005546 Bacteria 2997
24 Ga0070693_100186724 3300005547 Unclassified 1338
25 Ga0070665_100033774 3300005548 Bacteria 5146
26 Ga0070704_100010823 3300005549 Bacteria 5563
27 Ga0068855_100022301 3300005563 Bacteria 7588
28 Ga0068854_100117187 3300005578 Bacteria 2017
29 Ga0068856_100042521 3300005614 Bacteria 4470
30 Ga0068856_100215789 3300005614 Bacteria 1934
31 Ga0070702_100011002 3300005615 Bacteria 4486
32 Ga0068859_100204427 3300005617 Bacteria 2060
33 Ga0068861_100000412 3300005719 Bacteria 24724
34 Ga0068858_100001072 3300005842 Bacteria 28301
35 Ga0068858_100039072 3300005842 Bacteria 4403
36 Ga0068858_100134086 3300005842 Bacteria 2323
37 Ga0068860_100144170 3300005843 Bacteria 2291
38 Ga0068860_100317728 3300005843 Unclassified 1528
39 Ga0068862_100148332 3300005844 Bacteria 2086
40 Ga0068862_100228531 3300005844 Unclassified 1687
41 Ga0097621_100044936 3300006237 Bacteria 3566
42 Ga0097621_100103221 3300006237 Bacteria 2401
43 Ga0068871_100001050 3300006358 Bacteria 18513
44 Ga0068871_100033440 3300006358 Bacteria 4072
45 Ga0068871_100153383 3300006358 Unclassified 1966
46 Ga0075431_100033132 3300006847 Bacteria 5325
47 Ga0075431_100098551 3300006847 Bacteria 3018
48 Ga0075433_10156150 3300006852 Bacteria 2030
49 Ga0075434_100002262 3300006871 Bacteria 16850
50 Ga0075434_100087615 3300006871 Bacteria 3114
51 Ga0075434_100105036 3300006871 Bacteria 2835
52 Ga0075434_100292746 3300006871 Bacteria 1648
53 Ga0075434_100381248 3300006871 Bacteria 1431
54 Ga0068865_100015456 3300006881 Bacteria 4868
55 Ga0075436_100003654 3300006914 Bacteria 10533
56 Ga0075436_100047464 3300006914 Bacteria 2962
57 Ga0075436_100068368 3300006914 Unclassified 2454
58 Ga0075436_100070692 3300006914 Bacteria 2413
59 Ga0097620_100204436 3300006931 Bacteria 2060
60 Ga0075435_100000034 3300007076 Bacteria 70048
61 Ga0075435_100000347 3300007076 Bacteria 28627
62 Ga0075435_100030635 3300007076 Bacteria 4232
63 Ga0105240_10018646 3300009093 Bacteria 9301
64 Ga0105240_10025300 3300009093 Bacteria 7804
65 Ga0111539_10011730 3300009094 Bacteria 10994
66 Ga0111539_10012436 3300009094 Bacteria 10670
67 Ga0111539_10025350 3300009094 Bacteria 7269
68 Ga0111539_10054019 3300009094 Bacteria 4781
69 Ga0105245_10062195 3300009098 Bacteria 3368
70 Ga0114129_10005715 3300009147 Bacteria 17621
71 Ga0114129_10009787 3300009147 Bacteria 13672
72 Ga0114129_10121005 3300009147 Bacteria 3603
73 Ga0105243_10021318 3300009148 Bacteria 4918
74 Ga0105243_10085135 3300009148 Bacteria 2590
75 Ga0105242_10078649 3300009176 Bacteria 2753
76 Ga0105248_10176866 3300009177 Bacteria 2405
77 Ga0105248_10214225 3300009177 Bacteria 2170
78 Ga0105248_10225163 3300009177 Bacteria 2111
79 Ga0105249_10160675 3300009553 Bacteria 2171
80 Ga0105249_10258046 3300009553 Bacteria 1731
81 Ga0105249_10343539 3300009553 Bacteria 1510
82 Ga0157378_10004551 3300013297 Bacteria 12162
83 Ga0163163_10000005 3300014325 Bacteria 369548
84 Ga0157376_10111184 3300014969 Bacteria 2412
85 Ga0207645_10009155 3300025907 Bacteria 6866
86 Ga0207707_10099458 3300025912 Bacteria 2542
87 Ga0207707_10113513 3300025912 Bacteria 2368
88 Ga0207657_10005772 3300025919 Bacteria 12907
89 Ga0207652_10052070 3300025921 Bacteria 3512
90 Ga0207652_10117430 3300025921 Bacteria 2364
91 Ga0207659_10000050 3300025926 Bacteria 82225
92 Ga0207659_10223425 3300025926 Unclassified 1515
93 Ga0207670_10237895 3300025936 Bacteria 1401
94 Ga0207669_10131528 3300025937 Unclassified 1720
95 Ga0207711_10129911 3300025941 Bacteria 2258
96 Ga0207711_10212969 3300025941 Bacteria 1765
97 Ga0207689_10215325 3300025942 Bacteria 1587
98 Ga0207651_10018321 3300025960 Bacteria 4162
99 Ga0207712_10247629 3300025961 Bacteria 1439
100 Ga0207640_10089924 3300025981 Bacteria 2123
101 Ga0207703_10011100 3300026035 Bacteria 7015
102 Ga0207703_10155831 3300026035 Bacteria 1996
103 Ga0207708_10011853 3300026075 Bacteria 6491
104 Ga0207708_10058508 3300026075 Bacteria 2941
105 Ga0207675_100037035 3300026118 Bacteria 4551
106 Ga0207675_100053235 3300026118 Bacteria 3776
107 Ga0207675_100065526 3300026118 Bacteria 3395
108 Ga0207675_100230100 3300026118 Bacteria 1788
109 Ga0207428_10014923 3300027907 Bacteria 6731
110 Ga0207428_10022764 3300027907 Bacteria 5282
111 Ga0207428_10026558 3300027907 Bacteria 4833
112 Ga0207428_10047442 3300027907 Bacteria 3449
113 Ga0268264_10067035 3300028381 Bacteria 3029
114 Ga0268264_10241935 3300028381 Bacteria 1672
115 Ga0373943_0006999 3300035170 Bacteria 5059
116 Ga0373946_0002551 3300035171 Bacteria 6436
117 Ga0373955_0027304 3300035172 Bacteria 2949
118 Ga0373924_0056859 3300035410 Bacteria 1630
119 Ga0373935_0028391 3300035692 Bacteria 3459
120 Ga0373947_0117209 3300035725 Bacteria 1689
121 Ga0451576_0084602 3300045051 Bacteria 3300
122 Ga0495592_0134312 3300046454 Bacteria 1727
123 Ga0495653_0210961 3300046463 Bacteria 1312
124 Ga0495639_0057787 3300046475 Unclassified 1773
125 Ga0495608_0001180 3300046511 Bacteria 18529
126 Ga0495628_0123980 3300046516 Bacteria 1980
127 Ga0495645_0025590 3300046543 Bacteria 4284
128 Ga0495667_0079406 3300046559 Bacteria 2133
129 Ga0495634_0055142 3300046642 Bacteria 2658
130 Ga0495647_0005320 3300046681 Bacteria 4216
131 Ga0495658_0053138 3300046683 Bacteria 2300
132 Ga0495669_0000789 3300046684 Bacteria 13528
133 Ga0495613_0001776 3300046689 Bacteria 16375
134 Ga0495674_0042186 3300047319 Bacteria 4071
135 Ga0495684_0000861 3300047471 Bacteria 24626
136 Ga0496101_0005343 3300048904 Bacteria 8187
137 Ga0496104_0104873 3300048907 Bacteria 2709
138 Ga0496104_0203709 3300048907 Unclassified 1890
139 Ga0496107_0069026 3300048910 Unclassified 2565
140 Ga0496112_0013116 3300048915 Bacteria 7648
141 Ga0496114_0038245 3300048917 Bacteria 3970
142 Ga0501046_0045559 3300049580 Bacteria 3484
143 Ga0501047_0086943 3300049581 Bacteria 3004
144 Ga0501045_0088947 3300049824 Unclassified 2281
145 nmdc:mga06r32_183351_c1 3300050510 Bacteria 2079
146 nmdc:mga06r32_282622_c1 3300050510 Bacteria 1646
147 nmdc:mga08y16_1349_c1 3300050511 Bacteria 24501
148 nmdc:mga08y16_15828_c1 3300050511 Bacteria 7928
149 nmdc:mga08y16_23244_c1 3300050511 Bacteria 6545
150 nmdc:mga08y16_27219_c1 3300050511 Bacteria 6024
151 nmdc:mga08y16_46538_c1 3300050511 Bacteria 4542
152 nmdc:mga0n895_949_c1 3300050512 Bacteria 17319
153 nmdc:mga0n895_98239_c1 3300050512 Bacteria 2935
154 nmdc:mga0rr50_103915_c1 3300050513 Bacteria 2237
155 nmdc:mga0rr50_19_c1 3300050513 Bacteria 158236
156 nmdc:mga0rr50_5441_c1 3300050513 Bacteria 7596
157 nmdc:mga0rr50_77287_c1 3300050513 Bacteria 2558
158 nmdc:mga08x19_1689_c1 3300050514 Bacteria 13576
159 nmdc:mga08x19_4588_c1 3300050514 Bacteria 8202
160 nmdc:mga08x19_55787_c1 3300050514 Bacteria 2548
161 nmdc:mga0a205_184879_c1 3300050515 Bacteria 1977
162 nmdc:mga0a205_56754_c1 3300050515 Bacteria 3781
163 Ga0495619_0000331 3300053085 Bacteria 33075
164 Ga0495619_0081345 3300053085 Bacteria 2181
165 Ga0495619_0182077 3300053085 Unclassified 1454
166 Ga0157380_10098261
167 Ga0070676_10001313
168 Ga0068869_100208535
169 Ga0068868_100179502
170 Ga0070691_10007518
171 Ga0070669_100017634
172 Ga0070669_100088943
173 Ga0070675_100000045
174 Ga0070675_100005742
175 Ga0070674_100030327
176 Ga0070673_100022070
177 Ga0070701_10010860
178 Ga0070705_100009847
179 Ga0070700_100018890
180 Ga0070694_100110285
181 Ga0070681_10011939
182 Ga0070706_100179235
183 Ga0070698_100289239
184 Ga0070699_100006555
185 Ga0070699_100050710
186 Ga0070679_100197626
187 Ga0070684_100108506
188 Ga0070696_100046904
189 Ga0070693_100186724
190 Ga0070665_100033774
191 Ga0070704_100010823
192 Ga0068855_100022301
193 Ga0068854_100117187
194 Ga0068856_100042521
195 Ga0068856_100215789
196 Ga0070702_100011002
197 Ga0068859_100204427
198 Ga0068861_100000412
199 Ga0068858_100001072
200 Ga0068858_100039072
201 Ga0068858_100134086
202 Ga0068860_100144170
203 Ga0068860_100317728
204 Ga0068862_100148332
205 Ga0068862_100228531
206 Ga0097621_100044936
207 Ga0097621_100103221
208 Ga0068871_100001050
209 Ga0068871_100033440
210 Ga0068871_100153383
211 Ga0075431_100033132
212 Ga0075431_100098551
213 Ga0075433_10156150
214 Ga0075434_100002262
215 Ga0075434_100087615
216 Ga0075434_100105036
217 Ga0075434_100292746
218 Ga0075434_100381248
219 Ga0068865_100015456
220 Ga0075436_100003654
221 Ga0075436_100047464
222 Ga0075436_100068368
223 Ga0075436_100070692
224 Ga0097620_100204436
225 Ga0075435_100000034
226 Ga0075435_100000347
227 Ga0075435_100030635
228 Ga0105240_10018646
229 Ga0105240_10025300
230 Ga0111539_10011730
231 Ga0111539_10012436
232 Ga0111539_10025350
233 Ga0111539_10054019
234 Ga0105245_10062195
235 Ga0114129_10005715
236 Ga0114129_10009787
237 Ga0114129_10121005
238 Ga0105243_10021318
239 Ga0105243_10085135
240 Ga0105242_10078649
241 Ga0105248_10176866
242 Ga0105248_10214225
243 Ga0105248_10225163
244 Ga0105249_10160675
245 Ga0105249_10258046
246 Ga0105249_10343539
247 Ga0157378_10004551
248 Ga0163163_10000005
249 Ga0157376_10111184
250 Ga0207645_10009155
251 Ga0207707_10099458
252 Ga0207707_10113513
253 Ga0207657_10005772
254 Ga0207652_10052070
255 Ga0207652_10117430
256 Ga0207659_10000050
257 Ga0207659_10223425
258 Ga0207670_10237895
259 Ga0207669_10131528
260 Ga0207711_10129911
261 Ga0207711_10212969
262 Ga0207689_10215325
263 Ga0207651_10018321
264 Ga0207712_10247629
265 Ga0207640_10089924
266 Ga0207703_10011100
267 Ga0207703_10155831
268 Ga0207708_10011853
269 Ga0207708_10058508
270 Ga0207675_100037035
271 Ga0207675_100053235
272 Ga0207675_100065526
273 Ga0207675_100230100
274 Ga0207428_10014923
275 Ga0207428_10022764
276 Ga0207428_10026558
277 Ga0207428_10047442
278 Ga0268264_10067035
279 Ga0268264_10241935
280 Ga0373943_0006999
281 Ga0373946_0002551
282 Ga0373955_0027304
283 Ga0373924_0056859
284 Ga0373935_0028391
285 Ga0373947_0117209
286 Ga0451576_0084602
287 Ga0495592_0134312
288 Ga0495653_0210961
289 Ga0495639_0057787
290 Ga0495608_0001180
291 Ga0495628_0123980
292 Ga0495645_0025590
293 Ga0495667_0079406
294 Ga0495634_0055142
295 Ga0495647_0005320
296 Ga0495658_0053138
297 Ga0495669_0000789
298 Ga0495613_0001776
299 Ga0495674_0042186
300 Ga0495684_0000861
301 Ga0496101_0005343
302 Ga0496104_0104873
303 Ga0496104_0203709
304 Ga0496107_0069026
305 Ga0496112_0013116
306 Ga0496114_0038245
307 Ga0501046_0045559
308 Ga0501047_0086943
309 Ga0501045_0088947
310 nmdc:mga06r32_183351_c1
311 nmdc:mga06r32_282622_c1
312 nmdc:mga08y16_1349_c1
313 nmdc:mga08y16_15828_c1
314 nmdc:mga08y16_23244_c1
315 nmdc:mga08y16_27219_c1
316 nmdc:mga08y16_46538_c1
317 nmdc:mga0n895_949_c1
318 nmdc:mga0n895_98239_c1
319 nmdc:mga0rr50_103915_c1
320 nmdc:mga0rr50_19_c1
321 nmdc:mga0rr50_5441_c1
322 nmdc:mga0rr50_77287_c1
323 nmdc:mga08x19_1689_c1
324 nmdc:mga08x19_4588_c1
325 nmdc:mga08x19_55787_c1
326 nmdc:mga0a205_184879_c1
327 nmdc:mga0a205_56754_c1
328 Ga0495619_0000331
329 Ga0495619_0081345
330 Ga0495619_0182077

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13482

RNase_H_2

RNase_H superfamily

77

189

0.9

PF13482

RNase_H_2

RNase_H superfamily

230

303

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
6vfh-assembly1.cif.gz_A de novo designed tetrahedral nanoparticle t33_dn10 0.8424 286 416
6vl6-assembly1.cif.gz_B de novo designed tetrahedral nanoparticle t33_dn2 presenting bg505 sosip trimers 0.8376 285 394
3kd7-assembly1.cif.gz_A designed tpr module (ctpr390) in complex with its peptide-ligand (hsp90 peptide) 0.8306 286 398
6vfj-assembly1.cif.gz_B de novo designed icosahedral nanoparticle i53_dn5 0.8262 286 416
6vfk-assembly1.cif.gz_A de novo designed tetrahedral nanoparticle t33_dn10 displaying 4 copies of bg505-sosip trimer on the surface 0.823 286 417
ID Description Score Start End Superfamily
af_Q8CHY7_139_254_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9004 286 353 1.25.40.10
af_O95801_68_156_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8851 286 360 1.25.40.10
af_O94556_439_560_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8775 285 416 1.25.40.10
af_O94826_105_217_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8656 286 397 1.25.40.10
af_O94556_439_560_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8644 285 416 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A2V8HEM5-F1-model_v4 Tetratricopeptide repeat protein 0.9519 286 420
AF-A0A1Q7JM79-F1-model_v4 YprB ribonuclease H-like domain-containing protein 0.9474 31 426 GO:0003676
AF-A0A3N5YYM9-F1-model_v4 YprB ribonuclease H-like domain-containing protein 0.9017 219 430
AF-A0A1F2TWM7-F1-model_v4 YprB ribonuclease H-like domain-containing protein 0.8994 2 421 GO:0003676
AF-A0A1Q7JM79-F1-model_v4 YprB ribonuclease H-like domain-containing protein 0.8968 31 426 GO:0003676

Map