F241138

General Info

Members Datasets Scaffolds Average Seq Length
163 106 163 759

Family's Representative Sequence

Representative Sequence 3300005530|Ga0070679_100067410|Ga0070679_1000674102
Length 815
Sequence MHISVRSAYGAAALAAALASVTVSGAPARKAAPAKAGFDLSVDSIMRGPKLVGYPQTGLRWSGDSSHLYFEWRRPEDEEAATWVVGRDGHGLRQLTDAERRIAPPANGVWDSAHRRVLFVDDGDIALVDSIAGTRRTITRTTGAEANPRWARHETAVTFTRENNLFIVPLEGSDAGIVVQLTDVAPKKREPHETDSQAFVKAEERKLIEHTRIEAEKKKKADDKAKAHALPKFELADRQSASDLELSPDDTHVFLLIVERTEASKRPTVANYVTASSYEEDIPARTYVGDAQDERRLAVMNLSTGATHWVDGGFAGPQHQGNGASSTAVPGTSPAKPQPRDVRWGLPAINTDGTLAVADARSTDNKDRWLVAVDPESGKTRVIDALHDDAWIREAGGGFGADASFGWMPNQKQLWFLSERDGWMHLYTVDAASEDASARQLTQGTWEVDSAELSADKTKFYLTTSEVHPGERHIYAMPIEGGARTKLTSMTGAASASKISPDDRTIGFVYSYSTKPHEVYVMANAPGAQATQITTTPIEEWRSFKWIDPQVITYKARDGAEVYARLYTPEMIGARRDPSAPAVVFVHGAGYAQNAHKYWASYFREYMFHNLLASRGYVVLDPDYRASSGYGRDWRTAIYRHMGGKDLDDVVDGAKFLVATQKVNPKRIGVYGGSYGGFITLMAMFTSPDTFAAGAALRPVTDWTHYNNGYTSSILNTPQDDPEAYRRSSPIYFADGLKGALLICHGMVDTNVLFQDSVRLVQRLIELRKENWTFEPYPVENHGFEEATSWADEYKRILKLFDDNLKGKTPRAQTN

Samples

Sample ID Description Type Environment
1 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
35 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
55 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
77 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
78 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
79 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
80 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
81 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
82 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
83 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
84 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
85 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
86 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
87 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
88 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
89 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
90 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
91 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
92 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
93 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
94 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
95 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
96 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
98 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
99 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
100 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
101 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
102 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
103 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
104 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
105 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
106 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.23
Nodule 0
Rhizoplane 5.52
Rhizosphere 93.25
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065712_10068655 3300005290 Bacteria 9503
2 Ga0065715_10002254 3300005293 Bacteria 10415
3 Ga0065715_10101488 3300005293 Bacteria 3200
4 Ga0070676_10032536 3300005328 Bacteria 2989
5 Ga0070683_100000107 3300005329 Bacteria 54632
6 Ga0070683_100006655 3300005329 Bacteria 9706
7 Ga0070670_100010070 3300005331 Bacteria 8067
8 Ga0070670_100051474 3300005331 Bacteria 3537
9 Ga0070687_100007315 3300005343 Bacteria 4593
10 Ga0070661_100009951 3300005344 Bacteria 6596
11 Ga0070668_100006636 3300005347 Bacteria 8578
12 Ga0070669_100011293 3300005353 Bacteria 6341
13 Ga0070675_100022556 3300005354 Bacteria 5032
14 Ga0070675_100030430 3300005354 Bacteria 4359
15 Ga0070675_100087594 3300005354 Bacteria 2603
16 Ga0070674_100017238 3300005356 Bacteria 4539
17 Ga0070674_100027338 3300005356 Bacteria 3737
18 Ga0070673_100024537 3300005364 Bacteria 4423
19 Ga0070688_100010009 3300005365 Bacteria 5209
20 Ga0070659_100049358 3300005366 Bacteria 3309
21 Ga0070714_100005695 3300005435 Bacteria 9540
22 Ga0070713_100004300 3300005436 Bacteria 9545
23 Ga0070662_100043922 3300005457 Bacteria 3200
24 Ga0068867_100003053 3300005459 Bacteria 11801
25 Ga0070699_100031364 3300005518 Bacteria 4587
26 Ga0070679_100067410 3300005530 Bacteria 3569
27 Ga0070684_100000837 3300005535 Bacteria 21638
28 Ga0070697_100029878 3300005536 Bacteria 4375
29 Ga0070686_100010769 3300005544 Bacteria 5170
30 Ga0070665_100001492 3300005548 Bacteria 27240
31 Ga0070665_100005070 3300005548 Bacteria 13668
32 Ga0070664_100000303 3300005564 Bacteria 35797
33 Ga0070664_100023279 3300005564 Bacteria 5116
34 Ga0068857_100007454 3300005577 Bacteria 9415
35 Ga0068857_100036120 3300005577 Bacteria 4378
36 Ga0068854_100016954 3300005578 Bacteria 4866
37 Ga0070702_100007912 3300005615 Bacteria 5117
38 Ga0068864_100002418 3300005618 Bacteria 15421
39 Ga0068861_100003453 3300005719 Bacteria 10493
40 Ga0068863_100025860 3300005841 Bacteria 5600
41 Ga0068858_100012178 3300005842 Bacteria 8109
42 Ga0068858_100022393 3300005842 Bacteria 5898
43 Ga0068862_100021259 3300005844 Bacteria 5423
44 Ga0068862_100024519 3300005844 Bacteria 5062
45 Ga0075362_10001223 3300006177 Bacteria 8078
46 Ga0075367_10008003 3300006178 Bacteria 5450
47 Ga0068871_100004398 3300006358 Bacteria 9792
48 Ga0075428_100019146 3300006844 Bacteria 7572
49 Ga0075430_100003143 3300006846 Bacteria 13813
50 Ga0075433_10007439 3300006852 Bacteria 8698
51 Ga0075433_10011459 3300006852 Bacteria 7140
52 Ga0075434_100000141 3300006871 Bacteria 43904
53 Ga0075434_100001702 3300006871 Bacteria 18830
54 Ga0075434_100044199 3300006871 Bacteria 4420
55 Ga0075436_100000461 3300006914 Bacteria 26318
56 Ga0075436_100030488 3300006914 Bacteria 3712
57 Ga0075435_100000062 3300007076 Bacteria 55669
58 Ga0075435_100003470 3300007076 Bacteria 10692
59 Ga0075435_100030299 3300007076 Bacteria 4252
60 Ga0075435_100044417 3300007076 Bacteria 3559
61 Ga0075435_100071539 3300007076 Bacteria 2832
62 Ga0105240_10069330 3300009093 Bacteria 4365
63 Ga0111539_10000586 3300009094 Bacteria 46881
64 Ga0111539_10002814 3300009094 Bacteria 23108
65 Ga0105245_10019934 3300009098 Bacteria 5879
66 Ga0105247_10010027 3300009101 Bacteria 5737
67 Ga0114129_10002682 3300009147 Bacteria 24772
68 Ga0114129_10003812 3300009147 Bacteria 21254
69 Ga0114129_10004292 3300009147 Bacteria 20145
70 Ga0114129_10011138 3300009147 Bacteria 12820
71 Ga0114129_10026664 3300009147 Bacteria 8184
72 Ga0114129_10027887 3300009147 Bacteria 7996
73 Ga0114129_10035177 3300009147 Bacteria 7077
74 Ga0114129_10069006 3300009147 Bacteria 4928
75 Ga0114129_10081856 3300009147 Bacteria 4487
76 Ga0105242_10003253 3300009176 Bacteria 12673
77 Ga0105242_10015759 3300009176 Bacteria 5872
78 Ga0105248_10004005 3300009177 Bacteria 16285
79 Ga0105248_10044963 3300009177 Bacteria 4951
80 Ga0105248_10046961 3300009177 Bacteria 4841
81 Ga0105249_10001616 3300009553 Bacteria 19734
82 Ga0157370_10061239 3300013104 Bacteria 3572
83 Ga0157374_10009435 3300013296 Bacteria 8377
84 Ga0163163_10018587 3300014325 Bacteria 6511
85 Ga0157376_10003021 3300014969 Bacteria 11544
86 Ga0207697_10001433 3300025315 Bacteria 13053
87 Ga0207688_10000856 3300025901 Bacteria 15358
88 Ga0207647_10017627 3300025904 Bacteria 4852
89 Ga0207645_10002511 3300025907 Bacteria 14376
90 Ga0207649_10004001 3300025920 Bacteria 8029
91 Ga0207659_10000548 3300025926 Bacteria 22447
92 Ga0207700_10045852 3300025928 Bacteria 3229
93 Ga0207686_10009689 3300025934 Bacteria 5233
94 Ga0207704_10006219 3300025938 Bacteria 5553
95 Ga0207711_10028206 3300025941 Bacteria 4723
96 Ga0207661_10001959 3300025944 Bacteria 14163
97 Ga0207661_10010685 3300025944 Bacteria 6616
98 Ga0207679_10008136 3300025945 Bacteria 6671
99 Ga0207703_10005353 3300026035 Bacteria 10336
100 Ga0207703_10017074 3300026035 Bacteria 5659
101 Ga0207708_10000978 3300026075 Bacteria 21433
102 Ga0207708_10020916 3300026075 Bacteria 4937
103 Ga0207708_10024732 3300026075 Bacteria 4543
104 Ga0207708_10043105 3300026075 Bacteria 3439
105 Ga0207641_10002668 3300026088 Bacteria 16296
106 Ga0207641_10073062 3300026088 Bacteria 2955
107 Ga0207648_10004331 3300026089 Bacteria 14617
108 Ga0207674_10012051 3300026116 Bacteria 9684
109 Ga0207674_10044324 3300026116 Bacteria 4581
110 Ga0207675_100003564 3300026118 Bacteria 15160
111 Ga0207675_100007948 3300026118 Bacteria 10003
112 Ga0207675_100013796 3300026118 Bacteria 7536
113 Ga0207428_10006801 3300027907 Bacteria 10488
114 Ga0207428_10037533 3300027907 Bacteria 3941
115 Ga0268266_10003785 3300028379 Bacteria 14810
116 Ga0268265_10008859 3300028380 Bacteria 6799
117 Ga0268265_10014274 3300028380 Bacteria 5411
118 Ga0268265_10015502 3300028380 Bacteria 5218
119 Ga0373930_0001276 3300034816 Bacteria 3717
120 Ga0373929_0000408 3300035085 Bacteria 8099
121 Ga0373949_0003991 3300035090 Bacteria 3422
122 Ga0373932_0001792 3300035112 Bacteria 5781
123 Ga0373939_0000509 3300035114 Bacteria 9740
124 Ga0373961_0001681 3300035241 Bacteria 6172
125 Ga0373937_0000513 3300036401 Bacteria 35017
126 Ga0373925_0003323 3300037068 Bacteria 12500
127 Ga0451576_0006121 3300045051 Bacteria 14828
128 Ga0495645_0005003 3300046543 Bacteria 9084
129 Ga0495674_0055778 3300047319 Bacteria 3464
130 Ga0495686_0000306 3300047472 Bacteria 83341
131 Ga0496102_0045261 3300048905 Bacteria 3995
132 Ga0496104_0001489 3300048907 Bacteria 20209
133 Ga0496106_0015601 3300048909 Bacteria 5619
134 Ga0496108_0000282 3300048911 Bacteria 43586
135 Ga0496109_0001192 3300048912 Bacteria 21610
136 Ga0496110_0015809 3300048913 Bacteria 6292
137 Ga0496112_0001067 3300048915 Bacteria 20244
138 Ga0496112_0010102 3300048915 Bacteria 8546
139 Ga0496113_0035441 3300048916 Bacteria 3649
140 Ga0501036_0014562 3300049572 Bacteria 6549
141 Ga0501071_0023130 3300049587 Bacteria 4338
142 Ga0501045_0016670 3300049824 Bacteria 5219
143 nmdc:mga05p37_3190_c1 3300050507 Bacteria 19076
144 nmdc:mga05p37_36450_c1 3300050507 Bacteria 6034
145 nmdc:mga05p37_42663_c1 3300050507 Bacteria 5575
146 nmdc:mga05p37_61244_c1 3300050507 Bacteria 4633
147 nmdc:mga05p37_7289_c1 3300050507 Bacteria 13048
148 nmdc:mga06r32_131225_c1 3300050510 Bacteria 2477
149 nmdc:mga08y16_1466_c1 3300050511 Bacteria 23669
150 nmdc:mga08y16_2894_c1 3300050511 Bacteria 17656
151 nmdc:mga0n895_264_c1 3300050512 Bacteria 34123
152 nmdc:mga0n895_96533_c1 3300050512 Bacteria 2961
153 nmdc:mga0rr50_35374_c1 3300050513 Bacteria 3587
154 nmdc:mga0rr50_4473_c1 3300050513 Bacteria 8232
155 nmdc:mga0rr50_54315_c1 3300050513 Bacteria 2984
156 nmdc:mga0rr50_77_c1 3300050513 Bacteria 55683
157 nmdc:mga0rr50_9420_c1 3300050513 Bacteria 6138
158 nmdc:mga08x19_18584_c1 3300050514 Bacteria 4259
159 nmdc:mga08x19_289_c1 3300050514 Bacteria 37059
160 nmdc:mga0a205_22408_c2 3300050515 Bacteria 5457
161 nmdc:mga0a205_5817_c2 3300050515 Bacteria 10450
162 nmdc:mga0a205_6507_c1 3300050515 Bacteria 10561
163 Ga0530510_0013493 3300061734 Bacteria 5745

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300026118 Ga0207675_100013796 Ga0207675_1000137963 596
2 3300050514 nmdc:mga08x19_18584_c1 nmdc:mga08x19_18584_c1_1158_3503 667
3 3300050507 nmdc:mga05p37_3190_c1 nmdc:mga05p37_3190_c1_6517_8763 668
4 3300050515 nmdc:mga0a205_6507_c1 nmdc:mga0a205_6507_c1_762_3008 668
5 3300005618 Ga0068864_100002418 Ga0068864_10000241811 675
6 3300005841 Ga0068863_100025860 Ga0068863_1000258604 675
7 3300005842 Ga0068858_100012178 Ga0068858_1000121784 675
8 3300009101 Ga0105247_10010027 Ga0105247_100100272 675
9 3300009177 Ga0105248_10004005 Ga0105248_1000400512 675
10 3300026035 Ga0207703_10017074 Ga0207703_100170742 675
11 3300026088 Ga0207641_10073062 Ga0207641_100730622 675
12 3300047472 Ga0495686_0000306 Ga0495686_0000306_78415_80838 675
13 3300048915 Ga0496112_0010102 Ga0496112_0010102_4679_7081 675
14 3300048916 Ga0496113_0035441 Ga0496113_0035441_695_3097 675
15 3300026075 Ga0207708_10024732 Ga0207708_100247323 677
16 3300005347 Ga0070668_100006636 Ga0070668_1000066367 681
17 3300009147 Ga0114129_10069006 Ga0114129_100690063 681
18 3300005354 Ga0070675_100087594 Ga0070675_1000875941 682
19 3300005364 Ga0070673_100024537 Ga0070673_1000245372 684
20 3300005435 Ga0070714_100005695 Ga0070714_1000056956 684
21 3300006852 Ga0075433_10007439 Ga0075433_100074392 684
22 3300007076 Ga0075435_100071539 Ga0075435_1000715392 684
23 3300009147 Ga0114129_10027887 Ga0114129_100278874 684
24 3300050512 nmdc:mga0n895_96533_c1 nmdc:mga0n895_96533_c1_56_2350 684
25 3300050513 nmdc:mga0rr50_35374_c1 nmdc:mga0rr50_35374_c1_273_2687 684
26 3300026118 Ga0207675_100003564 Ga0207675_1000035646 686
27 3300006177 Ga0075362_10001223 Ga0075362_100012236 689
28 3300025904 Ga0207647_10017627 Ga0207647_100176273 689
29 3300005354 Ga0070675_100022556 Ga0070675_1000225562 690
30 3300025926 Ga0207659_10000548 Ga0207659_1000054819 690
31 3300028380 Ga0268265_10014274 Ga0268265_100142742 690
32 3300005365 Ga0070688_100010009 Ga0070688_1000100092 691
33 3300005536 Ga0070697_100029878 Ga0070697_1000298783 691
34 3300006852 Ga0075433_10011459 Ga0075433_100114596 691
35 3300006871 Ga0075434_100000141 Ga0075434_10000014131 691
36 3300009147 Ga0114129_10003812 Ga0114129_100038129 691
37 3300050515 nmdc:mga0a205_5817_c2 nmdc:mga0a205_5817_c2_5107_7476 691
38 3300005328 Ga0070676_10032536 Ga0070676_100325361 692
39 3300005331 Ga0070670_100051474 Ga0070670_1000514742 692
40 3300005343 Ga0070687_100007315 Ga0070687_1000073153 694
41 3300005353 Ga0070669_100011293 Ga0070669_1000112932 694
42 3300005356 Ga0070674_100027338 Ga0070674_1000273383 694
43 3300005459 Ga0068867_100003053 Ga0068867_1000030534 694
44 3300005615 Ga0070702_100007912 Ga0070702_1000079122 694
45 3300005719 Ga0068861_100003453 Ga0068861_1000034532 694
46 3300026075 Ga0207708_10000978 Ga0207708_100009788 694
47 3300026089 Ga0207648_10004331 Ga0207648_100043319 694
48 3300026118 Ga0207675_100007948 Ga0207675_1000079484 694
49 3300025907 Ga0207645_10002511 Ga0207645_1000251111 695
50 3300026075 Ga0207708_10020916 Ga0207708_100209162 695
51 3300006178 Ga0075367_10008003 Ga0075367_100080032 697
52 3300006844 Ga0075428_100019146 Ga0075428_1000191464 697
53 3300006846 Ga0075430_100003143 Ga0075430_10000314310 697
54 3300009147 Ga0114129_10035177 Ga0114129_100351771 697
55 3300049824 Ga0501045_0016670 Ga0501045_0016670_993_3416 697
56 3300050507 nmdc:mga05p37_7289_c1 nmdc:mga05p37_7289_c1_9816_12206 697
57 3300061734 Ga0530510_0013493 Ga0530510_0013493_1437_3860 697
58 3300005329 Ga0070683_100006655 Ga0070683_1000066559 698
59 3300007076 Ga0075435_100044417 Ga0075435_1000444172 698
60 3300025944 Ga0207661_10010685 Ga0207661_100106854 698
61 3300027907 Ga0207428_10037533 Ga0207428_100375332 698
62 3300050513 nmdc:mga0rr50_54315_c1 nmdc:mga0rr50_54315_c1_30_2399 698
63 3300005544 Ga0070686_100010769 Ga0070686_1000107694 699
64 3300005578 Ga0068854_100016954 Ga0068854_1000169542 699
65 3300007076 Ga0075435_100003470 Ga0075435_1000034704 699
66 3300048909 Ga0496106_0015601 Ga0496106_0015601_590_2926 699
67 3300050510 nmdc:mga06r32_131225_c1 nmdc:mga06r32_131225_c1_54_2447 699
68 3300005457 Ga0070662_100043922 Ga0070662_1000439222 700
69 3300005564 Ga0070664_100023279 Ga0070664_1000232792 700
70 3300005577 Ga0068857_100007454 Ga0068857_1000074546 700
71 3300025945 Ga0207679_10008136 Ga0207679_100081363 700
72 3300026116 Ga0207674_10012051 Ga0207674_100120517 700
73 3300034816 Ga0373930_0001276 Ga0373930_0001276_1044_3383 700
74 3300035085 Ga0373929_0000408 Ga0373929_0000408_2043_4382 700
75 3300035090 Ga0373949_0003991 Ga0373949_0003991_286_2625 700
76 3300035112 Ga0373932_0001792 Ga0373932_0001792_2847_5186 700
77 3300035114 Ga0373939_0000509 Ga0373939_0000509_143_2482 700
78 3300035241 Ga0373961_0001681 Ga0373961_0001681_2823_5162 700
79 3300045051 Ga0451576_0006121 Ga0451576_0006121_9084_11423 700
80 3300009176 Ga0105242_10015759 Ga0105242_100157595 701
81 3300006358 Ga0068871_100004398 Ga0068871_1000043985 702
82 3300009147 Ga0114129_10011138 Ga0114129_100111389 702
83 3300025938 Ga0207704_10006219 Ga0207704_100062195 702
84 3300050507 nmdc:mga05p37_42663_c1 nmdc:mga05p37_42663_c1_1146_3524 702
85 3300050513 nmdc:mga0rr50_9420_c1 nmdc:mga0rr50_9420_c1_2123_4525 702
86 3300006914 Ga0075436_100030488 Ga0075436_1000304882 703
87 3300005436 Ga0070713_100004300 Ga0070713_1000043002 704
88 3300005548 Ga0070665_100001492 Ga0070665_10000149222 704
89 3300009094 Ga0111539_10000586 Ga0111539_1000058621 704
90 3300025928 Ga0207700_10045852 Ga0207700_100458521 704
91 3300050511 nmdc:mga08y16_1466_c1 nmdc:mga08y16_1466_c1_1848_4214 704
92 3300006871 Ga0075434_100001702 Ga0075434_1000017022 705
93 3300006914 Ga0075436_100000461 Ga0075436_10000046124 705
94 3300007076 Ga0075435_100000062 Ga0075435_10000006245 705
95 3300050512 nmdc:mga0n895_264_c1 nmdc:mga0n895_264_c1_1865_4228 705
96 3300050513 nmdc:mga0rr50_77_c1 nmdc:mga0rr50_77_c1_888_3251 705
97 3300050514 nmdc:mga08x19_289_c1 nmdc:mga08x19_289_c1_32861_35224 705
98 3300005548 Ga0070665_100005070 Ga0070665_1000050703 706
99 3300005842 Ga0068858_100022393 Ga0068858_1000223931 706
100 3300009093 Ga0105240_10069330 Ga0105240_100693302 706
101 3300009098 Ga0105245_10019934 Ga0105245_100199344 706
102 3300009176 Ga0105242_10003253 Ga0105242_100032539 706
103 3300009177 Ga0105248_10046961 Ga0105248_100469612 706
104 3300013296 Ga0157374_10009435 Ga0157374_100094357 706
105 3300014969 Ga0157376_10003021 Ga0157376_100030216 706
106 3300025934 Ga0207686_10009689 Ga0207686_100096892 706
107 3300025941 Ga0207711_10028206 Ga0207711_100282062 706
108 3300026035 Ga0207703_10005353 Ga0207703_100053537 706
109 3300028379 Ga0268266_10003785 Ga0268266_1000378510 706
110 3300005293 Ga0065715_10101488 Ga0065715_101014882 707
111 3300009147 Ga0114129_10081856 Ga0114129_100818564 707
112 3300036401 Ga0373937_0000513 Ga0373937_0000513_11836_14265 707
113 3300047319 Ga0495674_0055778 Ga0495674_0055778_189_2618 707
114 3300037068 Ga0373925_0003323 Ga0373925_0003323_3121_5547 708
115 3300046543 Ga0495645_0005003 Ga0495645_0005003_6544_8967 708
116 3300005844 Ga0068862_100021259 Ga0068862_1000212593 709
117 3300028380 Ga0268265_10008859 Ga0268265_100088592 709
118 3300048905 Ga0496102_0045261 Ga0496102_0045261_868_3372 709
119 3300005518 Ga0070699_100031364 Ga0070699_1000313642 711
120 3300009094 Ga0111539_10002814 Ga0111539_1000281413 711
121 3300009553 Ga0105249_10001616 Ga0105249_100016167 711
122 3300025901 Ga0207688_10000856 Ga0207688_1000085613 711
123 3300050511 nmdc:mga08y16_2894_c1 nmdc:mga08y16_2894_c1_11840_14227 711
124 3300049572 Ga0501036_0014562 Ga0501036_0014562_2959_5409 712
125 3300049587 Ga0501071_0023130 Ga0501071_0023130_132_2582 712
126 3300007076 Ga0075435_100030299 Ga0075435_1000302992 715
127 3300009147 Ga0114129_10002682 Ga0114129_1000268219 716
128 3300013104 Ga0157370_10061239 Ga0157370_100612392 716
129 3300050507 nmdc:mga05p37_61244_c1 nmdc:mga05p37_61244_c1_1059_3488 716
130 3300050513 nmdc:mga0rr50_4473_c1 nmdc:mga0rr50_4473_c1_2168_4576 716
131 3300050515 nmdc:mga0a205_22408_c2 nmdc:mga0a205_22408_c2_2232_4769 716
132 3300026088 Ga0207641_10002668 Ga0207641_1000266811 717
133 3300009147 Ga0114129_10026664 Ga0114129_100266643 718
134 3300005331 Ga0070670_100010070 Ga0070670_1000100705 719
135 3300025315 Ga0207697_10001433 Ga0207697_100014338 719
136 3300005366 Ga0070659_100049358 Ga0070659_1000493582 720
137 3300009147 Ga0114129_10004292 Ga0114129_100042926 722
138 3300050507 nmdc:mga05p37_36450_c1 nmdc:mga05p37_36450_c1_1729_4173 722
139 3300005356 Ga0070674_100017238 Ga0070674_1000172383 726
140 3300005530 Ga0070679_100067410 Ga0070679_1000674102 726
141 3300005293 Ga0065715_10002254 Ga0065715_100022549 727
142 3300006871 Ga0075434_100044199 Ga0075434_1000441992 727
143 3300005354 Ga0070675_100030430 Ga0070675_1000304302 728
144 3300005577 Ga0068857_100036120 Ga0068857_1000361204 728
145 3300005844 Ga0068862_100024519 Ga0068862_1000245193 728
146 3300026075 Ga0207708_10043105 Ga0207708_100431052 728
147 3300026116 Ga0207674_10044324 Ga0207674_100443243 728
148 3300027907 Ga0207428_10006801 Ga0207428_100068017 728
149 3300028380 Ga0268265_10015502 Ga0268265_100155023 728
150 3300005290 Ga0065712_10068655 Ga0065712_100686554 731
151 3300005329 Ga0070683_100000107 Ga0070683_10000010716 731
152 3300005344 Ga0070661_100009951 Ga0070661_1000099516 731
153 3300005535 Ga0070684_100000837 Ga0070684_10000083711 731
154 3300005564 Ga0070664_100000303 Ga0070664_10000030311 731
155 3300009177 Ga0105248_10044963 Ga0105248_100449632 731
156 3300014325 Ga0163163_10018587 Ga0163163_100185874 731
157 3300025920 Ga0207649_10004001 Ga0207649_100040015 731
158 3300025944 Ga0207661_10001959 Ga0207661_100019596 731
159 3300048907 Ga0496104_0001489 Ga0496104_0001489_3202_5625 731
160 3300048911 Ga0496108_0000282 Ga0496108_0000282_16089_18512 731
161 3300048912 Ga0496109_0001192 Ga0496109_0001192_7343_9766 731
162 3300048913 Ga0496110_0015809 Ga0496110_0015809_3084_5507 731
163 3300048915 Ga0496112_0001067 Ga0496112_0001067_5752_8175 731

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00326

Peptidase_S9

Prolyl oligopeptidase family

603

808

0.96

PF01738

DLH

Dienelactone hydrolase family

571

800

0.85

PF02129

Peptidase_S15

X-Pro dipeptidyl-peptidase (S15 family)

558

713

0.83

PF20434

BD-FAE

BD-FAE

566

696

0.74

PF00930

DPPIV_N

Dipeptidyl peptidase IV (DPP IV) N-terminal region

239

539

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
7rjj-assembly2.cif.gz_B crystal structure of the peptidoglycan binding domain of the outer membrane protein (ompa) from klebsiella pneumoniae with bound d-alanine 0.7103 559 593
7d79-assembly2.cif.gz_B-2 the structure of dcsb complex with its substrate analogue 0.7071 465 604
5iq3-assembly1.cif.gz_A crystal structure of esterase mutant - f72g/l255w 0.6681 464 613
5iq2-assembly1.cif.gz_B crystal structure of esterase mutant - l255w 0.668 464 613
5yp1-assembly1.cif.gz_A crystal structure of dipeptidyl peptidase iv (dpp iv) from pseudoxanthomonas mexicana wo24 0.6297 37 722
ID Description Score Start End Superfamily
af_A0A1D6GDM6_475_615_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.7263 311 430 2.120.10.30
2hdwB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7225 462 601 3.40.50.1820
af_A0A0R0GYE0_51_217_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.696 462 599 3.40.50.1820
af_P59328_3_179_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.6943 329 440 2.130.10.10
af_F1RAC4_9_116_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.6809 323 428 2.130.10.10
ID Description Score Start End GO Terms
AF-X1AYR4-F1-model_v4 Dipeptidylpeptidase IV N-terminal domain-containing protein 0.9292 333 433 GO:0006508
GO:0008239
AF-X1AYR4-F1-model_v4 Dipeptidylpeptidase IV N-terminal domain-containing protein 0.8866 333 433 GO:0006508
GO:0008239
AF-A0A060BST1-F1-model_v4 CAZy families CE10 protein 0.8695 333 471 GO:0006508
AF-A0A060BST1-F1-model_v4 CAZy families CE10 protein 0.8637 333 471 GO:0006508
AF-A0A7S3BTI7-F1-model_v4 Dipeptidylpeptidase IV N-terminal domain-containing protein 0.8526 352 450 GO:0006508

Feature Viewer

pLDDT pTM Quality
68.29 0.73 High
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Predicted Structure (AlphaFold2)

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