F240378

General Info

Members Datasets Scaffolds Average Seq Length
162 135 162 430

Family's Representative Sequence

Representative Sequence 3300053085|Ga0495619_0000228|Ga0495619_0000228_11238_12683
Length 481
Sequence MNARFEKRDWAARRLHFIGVGGAGMSGLALVCAELGASVTGSDRADSSYIERLRAAGLSPAIGHSVSNVPDGAEVVVSTAIAGDNPELELAQAQGLHVMHRGELLAELCEEKRLIAVAGTHGKTTTTAMVAWCLRALRANPAFFIGGEVPGLGAGGASANAGWGTGEWVIAEADESDASFLRLKPEIAVLTNIEMDHHSRWGSVAQLRAAFAEFAAGAAAVVVPAEGSLDELVPAGSVLGFDTESPGPPRVELAVPGSHNLLNARAALGAVELAGFDTGEAAEALAAFPGAHRRLELKGECNGARIYDDYAHHPTEVRAALSALRELEPGRLIAAFQPHLYSRTKALAEEFGMALSLADEVVVLDVYPAREEPVGELAGVNGLSVARATADRMGGHRVIWAPRIEQARAALEGRLGPDQILVTIGAGDIFKLGEALASGRKTASERSLPDGDDDQRSEVEGPAARDSVDRAAGGAGEGGGA

Samples

Sample ID Description Type Environment
1 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
2 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
21 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
29 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
35 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
36 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
37 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
38 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
39 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
61 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
62 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
63 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
64 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
65 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
66 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
67 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
68 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
69 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
70 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
71 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
72 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
73 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
74 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
75 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
76 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
77 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
78 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
79 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
80 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
81 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
82 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
83 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
84 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
85 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
86 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
87 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
88 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
89 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
90 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
91 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
92 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
93 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
94 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
95 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
96 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
97 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
98 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
99 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
100 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
101 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
102 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
103 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
104 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
105 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
106 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
107 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
108 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
109 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
110 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
111 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
112 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
113 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
114 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
115 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
116 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
120 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
121 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
122 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
123 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
124 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
125 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
126 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
127 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
129 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
130 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
131 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
132 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
133 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
134 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
135 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 9.26
Rhizosphere 90.12
Stem 0
Stem Tuber 0
Unclassified 0.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24746J21847_1002476 3300001977 Bacteria 2939
2 JGI24748J21848_1003943 3300002074 Bacteria 1702
3 Ga0070683_100009688 3300005329 Bacteria 8246
4 Ga0070670_100017217 3300005331 Bacteria 6199
5 Ga0070682_100000017 3300005337 Bacteria 235228
6 Ga0070682_100000049 3300005337 Bacteria 127229
7 Ga0068868_100195441 3300005338 Bacteria 1684
8 Ga0070691_10000001 3300005341 Bacteria 94744
9 Ga0070691_10025163 3300005341 Bacteria 2771
10 Ga0070674_100000009 3300005356 Bacteria 143336
11 Ga0070673_100026326 3300005364 Bacteria 4295
12 Ga0070688_100000099 3300005365 Bacteria 44288
13 Ga0070700_100039894 3300005441 Bacteria 2871
14 Ga0068867_100007577 3300005459 Bacteria 7682
15 Ga0070685_10000025 3300005466 Bacteria 100621
16 Ga0070679_100000245 3300005530 Bacteria 45408
17 Ga0070684_100031777 3300005535 Bacteria 4496
18 Ga0068855_100312547 3300005563 Bacteria 1738
19 Ga0068854_100000065 3300005578 Bacteria 76046
20 Ga0068856_100097116 3300005614 Bacteria 2935
21 Ga0068864_100000031 3300005618 Bacteria 215331
22 Ga0068866_10000001 3300005718 Bacteria 519680
23 Ga0068851_10001099 3300005834 Bacteria 11740
24 Ga0068858_100000069 3300005842 Bacteria 105617
25 Ga0068860_100019741 3300005843 Bacteria 6534
26 Ga0081538_10000002 3300005981 Bacteria 242010
27 Ga0081539_10003548 3300005985 Bacteria 18957
28 Ga0081539_10050532 3300005985 Bacteria 2352
29 Ga0070715_10000001 3300006163 Bacteria 693690
30 Ga0075433_10000556 3300006852 Bacteria 24597
31 Ga0068865_100000034 3300006881 Bacteria 84043
32 Ga0075435_100025492 3300007076 Bacteria 4603
33 Ga0105245_10024744 3300009098 Bacteria 5274
34 Ga0105248_10000008 3300009177 Bacteria 403910
35 Ga0105238_10000009 3300009551 Bacteria 288729
36 Ga0105239_10042772 3300010375 Bacteria 4964
37 Ga0157370_10012720 3300013104 Bacteria 8710
38 Ga0157374_10030158 3300013296 Bacteria 4921
39 Ga0157375_10000236 3300013308 Bacteria 51196
40 Ga0157380_10000167 3300014326 Bacteria 37815
41 Ga0182008_10068318 3300014497 Bacteria 1749
42 Ga0207656_10000124 3300025321 Bacteria 29553
43 Ga0207642_10000002 3300025899 Bacteria 658166
44 Ga0207685_10000005 3300025905 Bacteria 289944
45 Ga0207652_10000930 3300025921 Bacteria 27515
46 Ga0207694_10000004 3300025924 Bacteria 967075
47 Ga0207650_10012659 3300025925 Bacteria 5822
48 Ga0207687_10000657 3300025927 Bacteria 23275
49 Ga0207687_10137853 3300025927 Bacteria 1847
50 Ga0207669_10000001 3300025937 Bacteria 377747
51 Ga0207704_10000059 3300025938 Bacteria 76643
52 Ga0207711_10000006 3300025941 Bacteria 792692
53 Ga0207661_10006131 3300025944 Bacteria 8494
54 Ga0207651_10003658 3300025960 Bacteria 7589
55 Ga0207640_10000151 3300025981 Bacteria 50644
56 Ga0207703_10000257 3300026035 Bacteria 59688
57 Ga0207639_10006444 3300026041 Bacteria 7982
58 Ga0207639_10076430 3300026041 Bacteria 2637
59 Ga0207678_10081433 3300026067 Bacteria 2771
60 Ga0207708_10155799 3300026075 Bacteria 1801
61 Ga0207702_10031902 3300026078 Bacteria 4395
62 Ga0207702_10078256 3300026078 Bacteria 2862
63 Ga0207648_10004675 3300026089 Bacteria 14001
64 Ga0207676_10000031 3300026095 Bacteria 215877
65 Ga0268264_10030106 3300028381 Bacteria 4450
66 Ga0265337_1000011 3300028556 Bacteria 87087
67 Ga0265326_10000066 3300028558 Bacteria 59893
68 Ga0265322_10000001 3300028654 Bacteria 543854
69 Ga0265324_10001571 3300029957 Bacteria 12751
70 Ga0265320_10000002 3300031240 Bacteria 542875
71 Ga0265329_10004009 3300031242 Bacteria 6269
72 Ga0265331_10002086 3300031250 Bacteria 13821
73 Ga0265327_10000011 3300031251 Bacteria 543807
74 Ga0265314_10000726 3300031711 Bacteria 39827
75 Ga0373937_0005754 3300036401 Bacteria 10652
76 Ga0395900_0234120 3300037418 Bacteria 1846
77 Ga0451853_3244588 3300041512 Bacteria 4047
78 Ga0466963_0004708 3300044694 Bacteria 7967
79 Ga0466963_0020587 3300044694 Bacteria 4148
80 Ga0495592_0001052 3300046454 Bacteria 19110
81 Ga0495603_0000258 3300046455 Bacteria 27900
82 Ga0495603_0005644 3300046455 Bacteria 7478
83 Ga0495641_0000029 3300046461 Bacteria 97259
84 Ga0495641_0069223 3300046461 Bacteria 1586
85 Ga0495582_0000004 3300046473 Bacteria 168322
86 Ga0495639_0031440 3300046475 Bacteria 2363
87 Ga0495608_0000080 3300046511 Bacteria 71060
88 Ga0495608_0000579 3300046511 Bacteria 25137
89 Ga0495618_0000008 3300046514 Bacteria 204578
90 Ga0495620_0000247 3300046515 Bacteria 40394
91 Ga0495628_0000165 3300046516 Bacteria 57669
92 Ga0495628_0019598 3300046516 Bacteria 5590
93 Ga0495630_0000145 3300046517 Bacteria 54974
94 Ga0495630_0027496 3300046517 Bacteria 4221
95 Ga0495644_0002051 3300046523 Bacteria 8124
96 Ga0495652_0000346 3300046529 Bacteria 55138
97 Ga0495598_0000195 3300046537 Bacteria 10678
98 Ga0495667_0000047 3300046559 Bacteria 117718
99 Ga0495667_0115758 3300046559 Bacteria 1732
100 Ga0495634_0000034 3300046642 Bacteria 106338
101 Ga0495634_0001103 3300046642 Bacteria 25051
102 Ga0495625_0006792 3300046660 Bacteria 10111
103 Ga0495635_0000034 3300046663 Bacteria 96408
104 Ga0495635_0071568 3300046663 Bacteria 2377
105 Ga0495657_0012809 3300046675 Bacteria 6217
106 Ga0495599_0021602 3300046678 Bacteria 4017
107 Ga0495647_0002105 3300046681 Bacteria 6223
108 Ga0495658_0000004 3300046683 Bacteria 173598
109 Ga0495669_0000030 3300046684 Bacteria 102988
110 Ga0495613_0000850 3300046689 Bacteria 23420
111 Ga0495624_0001013 3300046690 Bacteria 22249
112 Ga0495649_0006793 3300046694 Bacteria 7086
113 Ga0495600_0017984 3300046809 Bacteria 4500
114 Ga0495600_0023857 3300046809 Bacteria 3935
115 Ga0495604_0077601 3300047317 Bacteria 2496
116 Ga0495676_0001467 3300047321 Bacteria 20355
117 Ga0495676_0033237 3300047321 Bacteria 4347
118 Ga0495680_0000447 3300047322 Bacteria 46180
119 Ga0495680_0004314 3300047322 Bacteria 13633
120 Ga0495685_005956 3300047447 Bacteria 3981
121 Ga0495602_0004990 3300048088 Bacteria 13912
122 Ga0496100_0000005 3300048903 Bacteria 312112
123 Ga0496101_0000022 3300048904 Bacteria 216728
124 Ga0496106_0000108 3300048909 Bacteria 64484
125 Ga0496107_0000011 3300048910 Bacteria 201631
126 Ga0496108_0000001 3300048911 Bacteria 919044
127 Ga0496108_0003871 3300048911 Bacteria 12019
128 Ga0496109_0000004 3300048912 Bacteria 404818
129 Ga0496110_0011145 3300048913 Bacteria 7346
130 Ga0496111_0215395 3300048914 Bacteria 1427
131 Ga0496112_0000026 3300048915 Bacteria 144758
132 Ga0496113_0000090 3300048916 Bacteria 39733
133 Ga0496113_0024478 3300048916 Bacteria 4291
134 Ga0496114_0047534 3300048917 Bacteria 3569
135 Ga0496115_0000003 3300048918 Bacteria 354994
136 Ga0496115_0006232 3300048918 Bacteria 8727
137 Ga0501039_0022770 3300049575 Bacteria 4806
138 Ga0501041_0040469 3300049577 Bacteria 2829
139 Ga0501042_0041692 3300049578 Bacteria 3266
140 Ga0501068_0152081 3300049584 Bacteria 1455
141 Ga0501071_0014423 3300049587 Bacteria 5405
142 Ga0501072_0032588 3300049588 Bacteria 4081
143 Ga0501075_0020681 3300049591 Bacteria 4789
144 Ga0501075_0025916 3300049591 Bacteria 4310
145 Ga0501076_0014125 3300049592 Bacteria 6005
146 Ga0501077_0013130 3300049593 Bacteria 5191
147 Ga0501079_0010842 3300049741 Bacteria 6942
148 Ga0501081_0002804 3300049743 Bacteria 11058
149 Ga0501035_0126310 3300049822 Bacteria 2232
150 Ga0501045_0001477 3300049824 Bacteria 15625
151 nmdc:mga0a205_6_c1 3300050515 Bacteria 129758
152 Ga0495601_0003481 3300053077 Bacteria 9032
153 Ga0495601_0026065 3300053077 Bacteria 3607
154 Ga0495612_0000022 3300053078 Bacteria 119126
155 Ga0495612_0008452 3300053078 Bacteria 4175
156 Ga0495595_0001193 3300053084 Bacteria 10098
157 Ga0495619_0000077 3300053085 Bacteria 73017
158 Ga0495619_0000228 3300053085 Bacteria 40808
159 Ga0495619_0002455 3300053085 Bacteria 12131
160 Ga0495619_0029303 3300053085 Bacteria 3556
161 Ga0501082_0028273 3300060353 Bacteria 4832
162 Ga0530510_0000884 3300061734 Bacteria 19759

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046559 Ga0495667_0000047 Ga0495667_0000047_77433_78812 341
2 3300047322 Ga0495680_0004314 Ga0495680_0004314_2831_4210 341
3 3300048914 Ga0496111_0215395 Ga0496111_0215395_205_1386 348
4 3300005338 Ga0068868_100195441 Ga0068868_1001954412 350
5 3300005563 Ga0068855_100312547 Ga0068855_1003125472 350
6 3300025927 Ga0207687_10137853 Ga0207687_101378532 350
7 3300046523 Ga0495644_0002051 Ga0495644_0002051_3206_4423 362
8 3300007076 Ga0075435_100025492 Ga0075435_1000254924 366
9 3300014497 Ga0182008_10068318 Ga0182008_100683182 366
10 3300005530 Ga0070679_100000245 Ga0070679_10000024524 371
11 3300025921 Ga0207652_10000930 Ga0207652_100009306 371
12 3300046517 Ga0495630_0027496 Ga0495630_0027496_141_1415 372
13 3300048915 Ga0496112_0000026 Ga0496112_0000026_2890_4092 372
14 3300046461 Ga0495641_0069223 Ga0495641_0069223_103_1440 373
15 3300046511 Ga0495608_0000080 Ga0495608_0000080_3325_4602 373
16 3300047317 Ga0495604_0077601 Ga0495604_0077601_327_1580 373
17 3300047322 Ga0495680_0000447 Ga0495680_0000447_2897_4168 373
18 3300047447 Ga0495685_005956 Ga0495685_005956_1166_2491 373
19 3300053078 Ga0495612_0008452 Ga0495612_0008452_2825_4075 373
20 3300053084 Ga0495595_0001193 Ga0495595_0001193_6040_7317 373
21 3300053085 Ga0495619_0000077 Ga0495619_0000077_57332_58537 373
22 3300005618 Ga0068864_100000031 Ga0068864_100000031179 374
23 3300026095 Ga0207676_10000031 Ga0207676_10000031178 374
24 3300046559 Ga0495667_0115758 Ga0495667_0115758_18_1304 374
25 3300048911 Ga0496108_0003871 Ga0496108_0003871_553_1818 374
26 3300049575 Ga0501039_0022770 Ga0501039_0022770_2057_3373 375
27 3300049577 Ga0501041_0040469 Ga0501041_0040469_95_1411 375
28 3300049584 Ga0501068_0152081 Ga0501068_0152081_67_1383 375
29 3300049587 Ga0501071_0014423 Ga0501071_0014423_3010_4326 375
30 3300049588 Ga0501072_0032588 Ga0501072_0032588_1334_2650 375
31 3300049591 Ga0501075_0025916 Ga0501075_0025916_1178_2494 375
32 3300049592 Ga0501076_0014125 Ga0501076_0014125_1453_2769 375
33 3300049593 Ga0501077_0013130 Ga0501077_0013130_64_1380 375
34 3300049741 Ga0501079_0010842 Ga0501079_0010842_3805_5121 375
35 3300049743 Ga0501081_0002804 Ga0501081_0002804_3966_5282 375
36 3300049822 Ga0501035_0126310 Ga0501035_0126310_180_1496 375
37 3300049824 Ga0501045_0001477 Ga0501045_0001477_13437_14753 375
38 3300060353 Ga0501082_0028273 Ga0501082_0028273_1795_3111 375
39 3300061734 Ga0530510_0000884 Ga0530510_0000884_17031_18347 375
40 3300044694 Ga0466963_0004708 Ga0466963_0004708_2772_4058 377
41 3300046515 Ga0495620_0000247 Ga0495620_0000247_8364_9650 377
42 3300005329 Ga0070683_100009688 Ga0070683_1000096884 378
43 3300025944 Ga0207661_10006131 Ga0207661_100061314 378
44 3300046475 Ga0495639_0031440 Ga0495639_0031440_402_1664 378
45 3300046678 Ga0495599_0021602 Ga0495599_0021602_2451_3716 378
46 3300047321 Ga0495676_0001467 Ga0495676_0001467_2823_4094 378
47 3300046455 Ga0495603_0005644 Ga0495603_0005644_2863_4122 379
48 3300005364 Ga0070673_100026326 Ga0070673_1000263262 380
49 3300025960 Ga0207651_10003658 Ga0207651_100036588 380
50 3300026067 Ga0207678_10081433 Ga0207678_100814332 380
51 3300046537 Ga0495598_0000195 Ga0495598_0000195_2232_3503 380
52 3300049591 Ga0501075_0020681 Ga0501075_0020681_3277_4527 380
53 3300005356 Ga0070674_100000009 Ga0070674_100000009144 381
54 3300005718 Ga0068866_10000001 Ga0068866_10000001529 381
55 3300005843 Ga0068860_100019741 Ga0068860_1000197416 381
56 3300006163 Ga0070715_10000001 Ga0070715_10000001519 381
57 3300025899 Ga0207642_10000002 Ga0207642_10000002250 381
58 3300025905 Ga0207685_10000005 Ga0207685_10000005213 381
59 3300025937 Ga0207669_10000001 Ga0207669_10000001292 381
60 3300028381 Ga0268264_10030106 Ga0268264_100301064 381
61 3300046694 Ga0495649_0006793 Ga0495649_0006793_4314_5588 381
62 3300005441 Ga0070700_100039894 Ga0070700_1000398943 382
63 3300013296 Ga0157374_10030158 Ga0157374_100301584 382
64 3300026075 Ga0207708_10155799 Ga0207708_101557992 382
65 3300046516 Ga0495628_0000165 Ga0495628_0000165_39337_40677 382
66 3300046690 Ga0495624_0001013 Ga0495624_0001013_2887_4143 382
67 3300049578 Ga0501042_0041692 Ga0501042_0041692_1837_3144 382
68 3300046660 Ga0495625_0006792 Ga0495625_0006792_5935_7230 383
69 3300048911 Ga0496108_0000001 Ga0496108_0000001_834469_835755 385
70 3300048912 Ga0496109_0000004 Ga0496109_0000004_88280_89566 385
71 3300048916 Ga0496113_0024478 Ga0496113_0024478_86_1342 385
72 3300041512 Ga0451853_3244588 Ga0451853_3244588_1976_3265 386
73 3300046663 Ga0495635_0000034 Ga0495635_0000034_63931_65319 386
74 3300048913 Ga0496110_0011145 Ga0496110_0011145_3224_4513 386
75 3300005981 Ga0081538_10000002 Ga0081538_10000002264 387
76 3300037418 Ga0395900_0234120 Ga0395900_0234120_314_1618 388
77 3300009177 Ga0105248_10000008 Ga0105248_10000008167 389
78 3300005341 Ga0070691_10000001 Ga0070691_1000000149 390
79 3300046529 Ga0495652_0000346 Ga0495652_0000346_4644_5969 390
80 3300046689 Ga0495613_0000850 Ga0495613_0000850_6890_8236 390
81 3300048088 Ga0495602_0004990 Ga0495602_0004990_10217_11557 390
82 3300005337 Ga0070682_100000017 Ga0070682_100000017105 391
83 3300005459 Ga0068867_100007577 Ga0068867_1000075774 391
84 3300005535 Ga0070684_100031777 Ga0070684_1000317772 391
85 3300005842 Ga0068858_100000069 Ga0068858_10000006972 391
86 3300005985 Ga0081539_10003548 Ga0081539_100035488 391
87 3300009551 Ga0105238_10000009 Ga0105238_1000000914 391
88 3300013104 Ga0157370_10012720 Ga0157370_100127205 391
89 3300025924 Ga0207694_10000004 Ga0207694_10000004281 391
90 3300026035 Ga0207703_10000257 Ga0207703_1000025718 391
91 3300026089 Ga0207648_10004675 Ga0207648_1000467511 391
92 3300046454 Ga0495592_0001052 Ga0495592_0001052_11011_12360 391
93 3300046473 Ga0495582_0000004 Ga0495582_0000004_68227_69486 391
94 3300046514 Ga0495618_0000008 Ga0495618_0000008_177974_179311 391
95 3300046516 Ga0495628_0019598 Ga0495628_0019598_2018_3349 391
96 3300046642 Ga0495634_0000034 Ga0495634_0000034_75386_76645 391
97 3300046675 Ga0495657_0012809 Ga0495657_0012809_2092_3483 391
98 3300046681 Ga0495647_0002105 Ga0495647_0002105_4561_5892 391
99 3300046683 Ga0495658_0000004 Ga0495658_0000004_70070_71329 391
100 3300046809 Ga0495600_0023857 Ga0495600_0023857_1659_2996 391
101 3300048917 Ga0496114_0047534 Ga0496114_0047534_930_2261 391
102 3300048918 Ga0496115_0000003 Ga0496115_0000003_2586_3929 391
103 3300005985 Ga0081539_10050532 Ga0081539_100505322 392
104 3300006852 Ga0075433_10000556 Ga0075433_100005566 392
105 3300013308 Ga0157375_10000236 Ga0157375_100002367 392
106 3300014326 Ga0157380_10000167 Ga0157380_1000016710 392
107 3300028556 Ga0265337_1000011 Ga0265337_10000113 392
108 3300028558 Ga0265326_10000066 Ga0265326_1000006630 392
109 3300028654 Ga0265322_10000001 Ga0265322_10000001488 392
110 3300029957 Ga0265324_10001571 Ga0265324_100015715 392
111 3300031240 Ga0265320_10000002 Ga0265320_10000002487 392
112 3300031242 Ga0265329_10004009 Ga0265329_100040095 392
113 3300031250 Ga0265331_10002086 Ga0265331_100020865 392
114 3300031251 Ga0265327_10000011 Ga0265327_10000011487 392
115 3300031711 Ga0265314_10000726 Ga0265314_1000072624 392
116 3300046455 Ga0495603_0000258 Ga0495603_0000258_7596_8927 392
117 3300046511 Ga0495608_0000579 Ga0495608_0000579_13326_14636 392
118 3300046517 Ga0495630_0000145 Ga0495630_0000145_26762_28024 392
119 3300046642 Ga0495634_0001103 Ga0495634_0001103_10763_12031 392
120 3300046663 Ga0495635_0071568 Ga0495635_0071568_832_2094 392
121 3300047321 Ga0495676_0033237 Ga0495676_0033237_2903_4228 392
122 3300048903 Ga0496100_0000005 Ga0496100_0000005_172746_174071 392
123 3300048904 Ga0496101_0000022 Ga0496101_0000022_67615_68940 392
124 3300048909 Ga0496106_0000108 Ga0496106_0000108_56658_57983 392
125 3300048910 Ga0496107_0000011 Ga0496107_0000011_137812_139137 392
126 3300048918 Ga0496115_0006232 Ga0496115_0006232_6682_8007 392
127 3300050515 nmdc:mga0a205_6_c1 nmdc:mga0a205_6_c1_46301_47599 392
128 3300053077 Ga0495601_0003481 Ga0495601_0003481_2676_3938 392
129 3300053077 Ga0495601_0026065 Ga0495601_0026065_674_1936 392
130 3300053078 Ga0495612_0000022 Ga0495612_0000022_71405_72721 392
131 3300053085 Ga0495619_0002455 Ga0495619_0002455_3377_4639 392
132 3300026041 Ga0207639_10006444 Ga0207639_100064444 393
133 3300026078 Ga0207702_10031902 Ga0207702_100319023 393
134 3300036401 Ga0373937_0005754 Ga0373937_0005754_6866_8197 393
135 3300046809 Ga0495600_0017984 Ga0495600_0017984_782_2113 393
136 3300053085 Ga0495619_0029303 Ga0495619_0029303_1752_3068 393
137 3300046461 Ga0495641_0000029 Ga0495641_0000029_84831_86174 395
138 3300046684 Ga0495669_0000030 Ga0495669_0000030_41540_42883 395
139 3300006881 Ga0068865_100000034 Ga0068865_10000003416 396
140 3300025938 Ga0207704_10000059 Ga0207704_1000005916 396
141 3300002074 JGI24748J21848_1003943 JGI24748J21848_10039432 397
142 3300005331 Ga0070670_100017217 Ga0070670_1000172175 397
143 3300005337 Ga0070682_100000049 Ga0070682_10000004937 397
144 3300005365 Ga0070688_100000099 Ga0070688_10000009916 397
145 3300005466 Ga0070685_10000025 Ga0070685_1000002532 397
146 3300005578 Ga0068854_100000065 Ga0068854_1000000659 397
147 3300005614 Ga0068856_100097116 Ga0068856_1000971163 397
148 3300005834 Ga0068851_10001099 Ga0068851_100010993 397
149 3300025321 Ga0207656_10000124 Ga0207656_100001243 397
150 3300025925 Ga0207650_10012659 Ga0207650_100126595 397
151 3300025941 Ga0207711_10000006 Ga0207711_10000006562 397
152 3300025981 Ga0207640_10000151 Ga0207640_1000015136 397
153 3300026041 Ga0207639_10076430 Ga0207639_100764303 397
154 3300026078 Ga0207702_10078256 Ga0207702_100782562 397
155 3300044694 Ga0466963_0020587 Ga0466963_0020587_1651_2988 397
156 3300048916 Ga0496113_0000090 Ga0496113_0000090_2829_4169 397
157 3300005341 Ga0070691_10025163 Ga0070691_100251632 398
158 3300009098 Ga0105245_10024744 Ga0105245_100247443 398
159 3300010375 Ga0105239_10042772 Ga0105239_100427724 398
160 3300025927 Ga0207687_10000657 Ga0207687_1000065712 398
161 3300001977 JGI24746J21847_1002476 JGI24746J21847_10024763 399
162 3300053085 Ga0495619_0000228 Ga0495619_0000228_11238_12683 399

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01225

Mur_ligase

Mur ligase family, catalytic domain

14

113

0.98

PF08245

Mur_ligase_M

Mur ligase middle domain

117

233

0.86

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

293

427

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
1f8s-assembly1.cif.gz_B crystal structure of l-amino acid oxidase from calloselasma rhodostoma, complexed with three molecules of o-aminobenzoate. 0.9193 8 42
7e0c-assembly1.cif.gz_A-2 structure of l-glutamate oxidase r305e mutant 0.918 8 38
5ts5-assembly2.cif.gz_D crystal structure of l-amino acid oxidase from bothrops atrox 0.9102 8 42
3int-assembly3.cif.gz_B structure of udp-galactopyranose mutase bound to udp-galactose (reduced) 0.8924 8 41
3inr-assembly1.cif.gz_B structure of udp-galactopyranose mutase bound to udp-galactose (oxidized) 0.8875 8 41
ID Description Score Start End Superfamily
1gqqB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9535 11 94 3.40.50.720
af_P17952_10_107_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9527 8 94 3.40.50.720
af_P9WJL7_8_102_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9421 8 94 3.40.50.720
1j6uA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9419 9 95 3.40.50.720
5nahA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9373 8 41 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A6G8PXB3-F1-model_v4 Mur ligase N-terminal catalytic domain-containing protein 0.9813 9 96 GO:0009058
GO:0016881
AF-A0A383ABV0-F1-model_v4 Mur ligase N-terminal catalytic domain-containing protein 0.9789 10 133 GO:0005524
GO:0009058
GO:0016881
AF-A0A7C3SP77-F1-model_v4 UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) 0.9763 8 188 GO:0005524
GO:0008763
GO:0009058
GO:0016020
AF-A0A7W0LYL9-F1-model_v4 UDP-N-acetylmuramate--L-alanine ligase 0.9707 6 213 GO:0005524
GO:0009058
GO:0016881
AF-A0A7V9FDA1-F1-model_v4 UDP-N-acetylmuramate--L-alanine ligase 0.9684 8 103 GO:0009058
GO:0016881

Feature Viewer

pLDDT pTM Quality
85.46 0.69 Medium
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Predicted Structure (AlphaFold2)

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