F234036

General Info

Members Datasets Scaffolds Average Seq Length
160 106 159 172

Family's Representative Sequence

Representative Sequence 3300005467|Ga0070706_100025137|Ga0070706_1000251375
Length 195
Sequence MKETPQQYTERILGYVEGKRPLVVQAATAKKLNRLIKGISTAELRRRPAPEKWSVSEIIAHLADAEIVGGFRLRFILGSPGAPIVAYDQDKWVTSGHYDQRDPRKSVAHFCVLREANIALLKTLTPEQWKHYGMHSERGRESIEHIVRMFAGHDVNHLQQIEKILAHSDLKFGCKRPLDQALVGQRLVKVRLKST

Samples

Sample ID Description Type Environment
1 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
2 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
5 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
17 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
22 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
30 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300022730 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU2 Metagenome Rhizosphere
53 3300022732 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU1 Metagenome Rhizosphere
54 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
55 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
56 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
72 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
73 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
76 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
77 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
78 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
79 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
80 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
81 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
82 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
83 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
84 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
85 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
86 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
87 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
88 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
89 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
90 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
91 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
92 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
93 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
94 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
95 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
96 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
97 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
98 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
99 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
100 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
101 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
102 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
103 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
104 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
105 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
106 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.12
Metatranscriptomes 1.88
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.5
Nodule 0
Rhizoplane 3.75
Rhizosphere 92.5
Stem 0
Stem Tuber 0
Unclassified 1.25

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10293173 3300003322 Unclassified 2871
2 Ga0070670_100018434 3300005331 Bacteria 5988
3 Ga0070670_100960299 3300005331 Unclassified 776
4 Ga0068869_100090707 3300005334 Unclassified 2298
5 Ga0068869_100357577 3300005334 Unclassified 1192
6 Ga0070687_100435593 3300005343 Unclassified 868
7 Ga0070669_100891421 3300005353 Unclassified 759
8 Ga0070709_10018558 3300005434 Bacteria 4007
9 Ga0070709_10155019 3300005434 Bacteria 1587
10 Ga0070709_11151567 3300005434 Unclassified 622
11 Ga0070714_100266621 3300005435 Bacteria 1587
12 Ga0070713_100535789 3300005436 Unclassified 1108
13 Ga0070710_10699256 3300005437 Unclassified 715
14 Ga0070708_100068332 3300005445 Bacteria 3194
15 Ga0070708_100339376 3300005445 Bacteria 1416
16 Ga0070708_100391499 3300005445 Bacteria 1310
17 Ga0070706_100025137 3300005467 Bacteria 5482
18 Ga0070706_100270322 3300005467 Bacteria 1586
19 Ga0070706_101147678 3300005467 Bacteria 715
20 Ga0070707_100000757 3300005468 Bacteria 31825
21 Ga0070707_100093838 3300005468 Bacteria 2906
22 Ga0070707_100119638 3300005468 Bacteria 2557
23 Ga0070707_100167402 3300005468 Bacteria 2142
24 Ga0070698_100008266 3300005471 Bacteria 11251
25 Ga0070698_100059436 3300005471 Bacteria 3860
26 Ga0070698_100242296 3300005471 Bacteria 1736
27 Ga0070698_100796917 3300005471 Unclassified 889
28 Ga0070699_100086621 3300005518 Bacteria 2734
29 Ga0070699_100301380 3300005518 Bacteria 1438
30 Ga0070699_100327289 3300005518 Bacteria 1378
31 Ga0070699_100769609 3300005518 Bacteria 881
32 Ga0070697_100000393 3300005536 Bacteria 33883
33 Ga0070697_100046723 3300005536 Bacteria 3509
34 Ga0070697_100117426 3300005536 Bacteria 2222
35 Ga0070686_100129368 3300005544 Bacteria 1744
36 Ga0070695_100153529 3300005545 Bacteria 1609
37 Ga0070704_100098954 3300005549 Bacteria 2192
38 Ga0068855_100102844 3300005563 Bacteria 3288
39 Ga0068859_100116564 3300005617 Bacteria 2736
40 Ga0068866_10225492 3300005718 Bacteria 1133
41 Ga0068861_100235082 3300005719 Unclassified 1556
42 Ga0068863_100052195 3300005841 Bacteria 3876
43 Ga0068858_100152695 3300005842 Bacteria 2172
44 Ga0068860_100034618 3300005843 Bacteria 4846
45 Ga0068860_100035943 3300005843 Bacteria 4750
46 Ga0068860_100983809 3300005843 Unclassified 861
47 Ga0068862_100057065 3300005844 Bacteria 3347
48 Ga0068862_101041164 3300005844 Unclassified 811
49 Ga0081455_10272591 3300005937 Bacteria 1226
50 Ga0070717_10007853 3300006028 Bacteria 7942
51 Ga0070717_10055224 3300006028 Bacteria 3276
52 Ga0070717_10685681 3300006028 Bacteria 931
53 Ga0070716_100083896 3300006173 Unclassified 1909
54 Ga0097621_100446008 3300006237 Unclassified 1165
55 Ga0097621_100520571 3300006237 Unclassified 1079
56 Ga0068871_100191100 3300006358 Unclassified 1764
57 Ga0068871_100352179 3300006358 Bacteria 1303
58 Ga0075428_100149757 3300006844 Bacteria 2535
59 Ga0075430_100006044 3300006846 Bacteria 10209
60 Ga0075431_100081997 3300006847 Bacteria 3330
61 Ga0068865_100437732 3300006881 Unclassified 1078
62 Ga0097620_100116559 3300006931 Bacteria 2736
63 Ga0075435_100611654 3300007076 Bacteria 945
64 Ga0111539_10051550 3300009094 Bacteria 4901
65 Ga0111539_10063741 3300009094 Bacteria 4361
66 Ga0105245_10124906 3300009098 Bacteria 2407
67 Ga0105243_11287319 3300009148 Unclassified 748
68 Ga0105241_10459970 3300009174 Bacteria 1127
69 Ga0105242_10096230 3300009176 Bacteria 2501
70 Ga0105248_10277735 3300009177 Bacteria 1886
71 Ga0105237_10111185 3300009545 Bacteria 2731
72 Ga0105249_11670363 3300009553 Bacteria 709
73 Ga0105239_10149977 3300010375 Bacteria 2602
74 Ga0105239_11570059 3300010375 Unclassified 761
75 Ga0157374_10024137 3300013296 Bacteria 5448
76 Ga0157378_10009298 3300013297 Bacteria 8560
77 Ga0157378_10771971 3300013297 Unclassified 985
78 Ga0163162_10019759 3300013306 Bacteria 6614
79 Ga0163162_10062125 3300013306 Bacteria 3775
80 Ga0157375_10567123 3300013308 Unclassified 1296
81 Ga0163163_10023346 3300014325 Bacteria 5868
82 Ga0224570_100467 3300022730 Bacteria 3169
83 Ga0224569_100173 3300022732 Bacteria 5081
84 Ga0224572_1002727 3300024225 Unclassified 2894
85 Ga0224572_1003325 3300024225 Bacteria 2706
86 Ga0224572_1032688 3300024225 Bacteria 990
87 Ga0228598_1002372 3300024227 Bacteria 4114
88 Ga0228598_1017305 3300024227 Bacteria 1422
89 Ga0207684_10020700 3300025910 Bacteria 5621
90 Ga0207684_10185436 3300025910 Bacteria 1794
91 Ga0207684_10242314 3300025910 Bacteria 1555
92 Ga0207671_10479745 3300025914 Bacteria 991
93 Ga0207663_10749134 3300025916 Unclassified 776
94 Ga0207662_10248488 3300025918 Unclassified 1167
95 Ga0207646_10000478 3300025922 Bacteria 53489
96 Ga0207646_10080598 3300025922 Bacteria 2911
97 Ga0207646_10498024 3300025922 Bacteria 1098
98 Ga0207646_10872412 3300025922 Bacteria 799
99 Ga0207650_10108498 3300025925 Bacteria 2146
100 Ga0207700_10629097 3300025928 Unclassified 956
101 Ga0207664_10591466 3300025929 Unclassified 996
102 Ga0207686_10090731 3300025934 Bacteria 2017
103 Ga0207665_10565100 3300025939 Unclassified 885
104 Ga0207711_10200097 3300025941 Bacteria 1823
105 Ga0207711_10620712 3300025941 Unclassified 1009
106 Ga0207711_10734560 3300025941 Unclassified 920
107 Ga0207689_10252092 3300025942 Bacteria 1459
108 Ga0207677_10070671 3300026023 Bacteria 2461
109 Ga0207677_11149391 3300026023 Unclassified 709
110 Ga0207677_11152579 3300026023 Unclassified 708
111 Ga0207678_10491407 3300026067 Bacteria 1069
112 Ga0207641_10670249 3300026088 Bacteria 1020
113 Ga0207428_10224112 3300027907 Bacteria 1408
114 Ga0265356_1001613 3300028017 Bacteria 3261
115 Ga0268265_10485950 3300028380 Unclassified 1161
116 Ga0268264_10025260 3300028381 Bacteria 4852
117 Ga0268264_10049748 3300028381 Bacteria 3488
118 Ga0265337_1096244 3300028556 Unclassified 806
119 Ga0265338_10021663 3300028800 Bacteria 6688
120 Ga0265338_10167085 3300028800 Bacteria 1692
121 Ga0265338_10174402 3300028800 Bacteria 1645
122 Ga0265760_10001336 3300031090 Bacteria 7235
123 Ga0265760_10001779 3300031090 Bacteria 6331
124 Ga0265760_10055438 3300031090 Unclassified 1198
125 Ga0265325_10309179 3300031241 Unclassified 704
126 Ga0265339_10041777 3300031249 Bacteria 2543
127 Ga0265316_10254276 3300031344 Unclassified 1289
128 Ga0265316_10834126 3300031344 Unclassified 646
129 Ga0265342_10082308 3300031712 Bacteria 1857
130 Ga0307413_10614331 3300031824 Bacteria 892
131 Ga0307415_100532979 3300032126 Bacteria 1033
132 Ga0316212_1031027 3300033547 Unclassified 751
133 Ga0373927_0043238 3300035695 Bacteria 2918
134 Ga0439436_0114287 3300041404 Bacteria 754
135 Ga0439431_0068612 3300041997 Bacteria 942
136 Ga0439433_0054531 3300041999 Bacteria 946
137 Ga0439457_077512 3300042014 Bacteria 762
138 Ga0439464_0301852 3300042439 Unclassified 523
139 Ga0466968_0314226 3300044735 Unclassified 756
140 Ga0466957_0000769 3300044842 Bacteria 16358
141 Ga0466958_0080911 3300045836 Bacteria 1999
142 Ga0495580_0007936 3300046472 Bacteria 8488
143 Ga0495580_0176717 3300046472 Unclassified 1475
144 Ga0495580_0487983 3300046472 Bacteria 823
145 Ga0495580_0589723 3300046472 Unclassified 735
146 Ga0495662_0147037 3300046476 Bacteria 1160
147 Ga0495587_0088526 3300046536 Bacteria 1790
148 Ga0496102_0108553 3300048905 Bacteria 2585
149 Ga0496102_0165626 3300048905 Bacteria 2080
150 Ga0496103_0112717 3300048906 Bacteria 1728
151 Ga0496104_0012126 3300048907 Bacteria 7741
152 Ga0496112_0164245 3300048915 Bacteria 2186
153 Ga0496112_0484474 3300048915 Bacteria 1173
154 nmdc:mga00v17_21792_c1 3300050491 Bacteria 3688
155 nmdc:mga0yw44_954065_c1 3300050492 Unclassified 581
156 nmdc:mga06z11_123560_c1 3300050494 Bacteria 1446
157 nmdc:mga06r32_54769_c1 3300050510 Bacteria 3825
158 nmdc:mga08y16_530365_c1 3300050511 Unclassified 1193
159 nmdc:mga0sz30_84902_c1 3300050516 Bacteria 1373

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009553 Ga0105249_11670363 Ga0105249_116703632 140
2 3300005334 Ga0068869_100090707 Ga0068869_1000907071 154
3 3300006844 Ga0075428_100149757 Ga0075428_1001497573 154
4 3300006847 Ga0075431_100081997 Ga0075431_1000819971 154
5 3300050510 nmdc:mga06r32_54769_c1 nmdc:mga06r32_54769_c1_810_1355 154
6 3300048907 Ga0496104_0012126 Ga0496104_0012126_6755_7228 157
7 3300042439 Ga0439464_0301852 Ga0439464_0301852_21_497 158
8 3300026023 Ga0207677_10070671 Ga0207677_100706713 161
9 3300026088 Ga0207641_10670249 Ga0207641_106702491 161
10 3300009094 Ga0111539_10063741 Ga0111539_100637415 164
11 3300048915 Ga0496112_0164245 Ga0496112_0164245_875_1369 164
12 3300046472 Ga0495580_0176717 Ga0495580_0176717_370_867 165
13 3300009094 Ga0111539_10051550 Ga0111539_100515504 166
14 3300022730 Ga0224570_100467 Ga0224570_1004673 166
15 3300024225 Ga0224572_1003325 Ga0224572_10033251 166
16 3300028017 Ga0265356_1001613 Ga0265356_10016133 166
17 3300031090 Ga0265760_10001779 Ga0265760_100017799 166
18 3300041404 Ga0439436_0114287 Ga0439436_0114287_73_576 166
19 3300041997 Ga0439431_0068612 Ga0439431_0068612_388_891 166
20 3300041999 Ga0439433_0054531 Ga0439433_0054531_65_568 166
21 3300042014 Ga0439457_077512 Ga0439457_077512_44_544 166
22 3300050511 nmdc:mga08y16_530365_c1 nmdc:mga08y16_530365_c1_198_698 166
23 3300005435 Ga0070714_100266621 Ga0070714_1002666212 167
24 3300005445 Ga0070708_100068332 Ga0070708_1000683323 167
25 3300005467 Ga0070706_101147678 Ga0070706_1011476781 167
26 3300005468 Ga0070707_100167402 Ga0070707_1001674022 167
27 3300005518 Ga0070699_100086621 Ga0070699_1000866212 167
28 3300005536 Ga0070697_100000393 Ga0070697_10000039320 167
29 3300006028 Ga0070717_10685681 Ga0070717_106856811 167
30 3300026067 Ga0207678_10491407 Ga0207678_104914072 167
31 3300031090 Ga0265760_10055438 Ga0265760_100554382 167
32 3300005343 Ga0070687_100435593 Ga0070687_1004355931 168
33 3300005434 Ga0070709_11151567 Ga0070709_111515671 168
34 3300005437 Ga0070710_10699256 Ga0070710_106992561 168
35 3300005467 Ga0070706_100270322 Ga0070706_1002703223 168
36 3300005468 Ga0070707_100093838 Ga0070707_1000938382 168
37 3300005471 Ga0070698_100008266 Ga0070698_1000082665 168
38 3300005471 Ga0070698_100059436 Ga0070698_1000594363 168
39 3300005518 Ga0070699_100327289 Ga0070699_1003272891 168
40 3300005549 Ga0070704_100098954 Ga0070704_1000989543 168
41 3300005719 Ga0068861_100235082 Ga0068861_1002350822 168
42 3300005844 Ga0068862_101041164 Ga0068862_1010411642 168
43 3300006173 Ga0070716_100083896 Ga0070716_1000838962 168
44 3300022732 Ga0224569_100173 Ga0224569_1001732 168
45 3300024225 Ga0224572_1002727 Ga0224572_10027271 168
46 3300024225 Ga0224572_1032688 Ga0224572_10326881 168
47 3300024227 Ga0228598_1002372 Ga0228598_10023724 168
48 3300025910 Ga0207684_10185436 Ga0207684_101854363 168
49 3300025918 Ga0207662_10248488 Ga0207662_102484882 168
50 3300025922 Ga0207646_10498024 Ga0207646_104980242 168
51 3300025922 Ga0207646_10872412 Ga0207646_108724122 168
52 3300035695 Ga0373927_0043238 Ga0373927_0043238_1228_1734 168
53 3300046472 Ga0495580_0007936 Ga0495580_0007936_3226_3732 168
54 3300046476 Ga0495662_0147037 Ga0495662_0147037_406_915 168
55 3300028556 Ga0265337_1096244 Ga0265337_10962441 169
56 3300028800 Ga0265338_10021663 Ga0265338_100216638 169
57 3300031090 Ga0265760_10001336 Ga0265760_100013369 169
58 3300046536 Ga0495587_0088526 Ga0495587_0088526_312_821 169
59 3300050491 nmdc:mga00v17_21792_c1 nmdc:mga00v17_21792_c1_1085_1594 169
60 3300050492 nmdc:mga0yw44_954065_c1 nmdc:mga0yw44_954065_c1_13_522 169
61 3300050494 nmdc:mga06z11_123560_c1 nmdc:mga06z11_123560_c1_213_722 169
62 3300050516 nmdc:mga0sz30_84902_c1 nmdc:mga0sz30_84902_c1_683_1192 169
63 3300005434 Ga0070709_10018558 Ga0070709_100185584 170
64 3300005436 Ga0070713_100535789 Ga0070713_1005357891 170
65 3300005445 Ga0070708_100339376 Ga0070708_1003393762 170
66 3300005471 Ga0070698_100796917 Ga0070698_1007969171 170
67 3300005842 Ga0068858_100152695 Ga0068858_1001526953 170
68 3300005844 Ga0068862_100057065 Ga0068862_1000570652 170
69 3300006028 Ga0070717_10007853 Ga0070717_100078537 170
70 3300006028 Ga0070717_10055224 Ga0070717_100552243 170
71 3300006028 Ga0070717_10055224 Ga0070717_100552244 170
72 3300009148 Ga0105243_11287319 Ga0105243_112873192 170
73 3300025916 Ga0207663_10749134 Ga0207663_107491341 170
74 3300025922 Ga0207646_10080598 Ga0207646_100805982 170
75 3300025928 Ga0207700_10629097 Ga0207700_106290972 170
76 3300025929 Ga0207664_10591466 Ga0207664_105914662 170
77 3300025939 Ga0207665_10565100 Ga0207665_105651002 170
78 3300025941 Ga0207711_10620712 Ga0207711_106207121 170
79 3300025941 Ga0207711_10734560 Ga0207711_107345602 170
80 3300028380 Ga0268265_10485950 Ga0268265_104859502 170
81 3300003322 rootL2_10293173 rootL2_102931732 171
82 3300005331 Ga0070670_100018434 Ga0070670_1000184346 171
83 3300005331 Ga0070670_100960299 Ga0070670_1009602991 171
84 3300005334 Ga0068869_100357577 Ga0068869_1003575772 171
85 3300005353 Ga0070669_100891421 Ga0070669_1008914212 171
86 3300005434 Ga0070709_10155019 Ga0070709_101550192 171
87 3300005445 Ga0070708_100391499 Ga0070708_1003914992 171
88 3300005467 Ga0070706_100025137 Ga0070706_1000251375 171
89 3300005468 Ga0070707_100000757 Ga0070707_10000075712 171
90 3300005468 Ga0070707_100119638 Ga0070707_1001196382 171
91 3300005471 Ga0070698_100242296 Ga0070698_1002422962 171
92 3300005518 Ga0070699_100301380 Ga0070699_1003013802 171
93 3300005518 Ga0070699_100769609 Ga0070699_1007696092 171
94 3300005536 Ga0070697_100046723 Ga0070697_1000467233 171
95 3300005536 Ga0070697_100117426 Ga0070697_1001174261 171
96 3300005544 Ga0070686_100129368 Ga0070686_1001293682 171
97 3300005545 Ga0070695_100153529 Ga0070695_1001535292 171
98 3300005563 Ga0068855_100102844 Ga0068855_1001028443 171
99 3300005617 Ga0068859_100116564 Ga0068859_1001165642 171
100 3300005718 Ga0068866_10225492 Ga0068866_102254922 171
101 3300005841 Ga0068863_100052195 Ga0068863_1000521954 171
102 3300005843 Ga0068860_100034618 Ga0068860_1000346183 171
103 3300005843 Ga0068860_100035943 Ga0068860_1000359434 171
104 3300005843 Ga0068860_100983809 Ga0068860_1009838091 171
105 3300005937 Ga0081455_10272591 Ga0081455_102725912 171
106 3300006237 Ga0097621_100446008 Ga0097621_1004460082 171
107 3300006237 Ga0097621_100520571 Ga0097621_1005205712 171
108 3300006358 Ga0068871_100191100 Ga0068871_1001911002 171
109 3300006358 Ga0068871_100352179 Ga0068871_1003521792 171
110 3300006846 Ga0075430_100006044 Ga0075430_1000060447 171
111 3300006881 Ga0068865_100437732 Ga0068865_1004377322 171
112 3300006931 Ga0097620_100116559 Ga0097620_1001165594 171
113 3300007076 Ga0075435_100611654 Ga0075435_1006116542 171
114 3300009098 Ga0105245_10124906 Ga0105245_101249062 171
115 3300009174 Ga0105241_10459970 Ga0105241_104599702 171
116 3300009176 Ga0105242_10096230 Ga0105242_100962302 171
117 3300009177 Ga0105248_10277735 Ga0105248_102777352 171
118 3300009545 Ga0105237_10111185 Ga0105237_101111852 171
119 3300010375 Ga0105239_10149977 Ga0105239_101499772 171
120 3300010375 Ga0105239_11570059 Ga0105239_115700592 171
121 3300013296 Ga0157374_10024137 Ga0157374_100241374 171
122 3300013297 Ga0157378_10009298 Ga0157378_100092988 171
123 3300013297 Ga0157378_10771971 Ga0157378_107719712 171
124 3300013306 Ga0163162_10019759 Ga0163162_100197598 171
125 3300013306 Ga0163162_10062125 Ga0163162_100621252 171
126 3300013308 Ga0157375_10567123 Ga0157375_105671232 171
127 3300014325 Ga0163163_10023346 Ga0163163_100233468 171
128 3300024227 Ga0228598_1017305 Ga0228598_10173052 171
129 3300025910 Ga0207684_10020700 Ga0207684_100207002 171
130 3300025910 Ga0207684_10242314 Ga0207684_102423141 171
131 3300025914 Ga0207671_10479745 Ga0207671_104797452 171
132 3300025922 Ga0207646_10000478 Ga0207646_1000047831 171
133 3300025925 Ga0207650_10108498 Ga0207650_101084983 171
134 3300025934 Ga0207686_10090731 Ga0207686_100907313 171
135 3300025941 Ga0207711_10200097 Ga0207711_102000972 171
136 3300025942 Ga0207689_10252092 Ga0207689_102520922 171
137 3300026023 Ga0207677_11149391 Ga0207677_111493911 171
138 3300026023 Ga0207677_11152579 Ga0207677_111525791 171
139 3300027907 Ga0207428_10224112 Ga0207428_102241122 171
140 3300028381 Ga0268264_10025260 Ga0268264_100252603 171
141 3300028381 Ga0268264_10049748 Ga0268264_100497482 171
142 3300028800 Ga0265338_10167085 Ga0265338_101670852 171
143 3300028800 Ga0265338_10174402 Ga0265338_101744022 171
144 3300031241 Ga0265325_10309179 Ga0265325_103091791 171
145 3300031249 Ga0265339_10041777 Ga0265339_100417774 171
146 3300031344 Ga0265316_10254276 Ga0265316_102542762 171
147 3300031344 Ga0265316_10834126 Ga0265316_108341261 171
148 3300031712 Ga0265342_10082308 Ga0265342_100823083 171
149 3300031824 Ga0307413_10614331 Ga0307413_106143312 171
150 3300032126 Ga0307415_100532979 Ga0307415_1005329791 171
151 3300033547 Ga0316212_1031027 Ga0316212_10310271 171
152 3300044735 Ga0466968_0314226 Ga0466968_0314226_110_628 171
153 3300044842 Ga0466957_0000769 Ga0466957_0000769_14947_15471 171
154 3300045836 Ga0466958_0080911 Ga0466958_0080911_1047_1571 171
155 3300046472 Ga0495580_0487983 Ga0495580_0487983_11_529 171
156 3300046472 Ga0495580_0589723 Ga0495580_0589723_177_707 171
157 3300048905 Ga0496102_0108553 Ga0496102_0108553_1080_1607 171
158 3300048905 Ga0496102_0165626 Ga0496102_0165626_1228_1746 171
159 3300048906 Ga0496103_0112717 Ga0496103_0112717_836_1363 171
160 3300048915 Ga0496112_0484474 Ga0496112_0484474_136_663 171

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12867

DinB_2

DinB superfamily

26

161

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1rxq-assembly1.cif.gz_B yfit from bacillus subtilis is a probable metal-dependent hydrolase with an unusual four-helix bundle topology 0.8769 3 167
2yqy-assembly2.cif.gz_B crystal structure of tt2238, a four-helix bundle protein 0.8253 21 162
2rd9-assembly3.cif.gz_B crystal structure of a putative yfit-like metal-dependent hydrolase (bh0186) from bacillus halodurans c-125 at 2.30 a resolution 0.8113 21 169
2rd9-assembly1.cif.gz_A crystal structure of a putative yfit-like metal-dependent hydrolase (bh0186) from bacillus halodurans c-125 at 2.30 a resolution 0.8087 21 169
1rxq-assembly1.cif.gz_B yfit from bacillus subtilis is a probable metal-dependent hydrolase with an unusual four-helix bundle topology 0.7992 3 167
ID Description Score Start End Superfamily
1rxqD00 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.8563 1 167 1.20.120.450
2yqyB00 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.8253 21 162 1.20.120.450
2rd9B01 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.8117 21 167 1.20.120.450
1rxqD00 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.8074 1 167 1.20.120.450
2yqyB00 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7775 21 162 1.20.120.450
ID Description Score Start End GO Terms
AF-A0A2V9WKZ6-F1-model_v4 DinB-like domain-containing protein 0.9989 1 171
AF-A0A2V9DJC5-F1-model_v4 DinB-like domain-containing protein 0.9969 1 170
AF-A0A2V7Q958-F1-model_v4 DinB-like domain-containing protein 0.9954 1 166
AF-A0A2V9UJQ5-F1-model_v4 DinB-like domain-containing protein 0.9953 1 166
AF-A0A2V9WKZ6-F1-model_v4 DinB-like domain-containing protein 0.9931 1 171

Feature Viewer

pLDDT pTM Quality
96.32 0.91 High
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Predicted Structure (AlphaFold2)

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