F233910

General Info

Members Datasets Scaffolds Average Seq Length
160 111 320 337

Family's Representative Sequence

Representative Sequence 3300005365|Ga0070688_100052816|Ga0070688_1000528162
Length 364
Sequence MRPWEIRREWRGGSSGSIVRSPNIDHPMNIFELTRALIDIDSTTGREREIGDFLLRQLEELVGRFPGGMVERMLVEGDRCNVFAAWGEPVVVLSTHMDTVPPFFPSSEDGEFLHGRGACDTKGGIAAMLQAARELLDEGVRGFGLLFVVGEETDSVGAQMANRHPRGSRYLINGEPTENRLALGSKGNLYLALAAEGRAAHSAYPELGDSAIDKLVDVLARLRELPLPSDPVLGETTLNVGTLAGGRAPNVVADQARAEVTIRTVGETAELRRRIAAAVHAVPGVHIAEIREVPAVYLGSLPGFETTIVKYTTDIPRLGAWGEPFLLGPGSIHVAHTPAERIAKRDVLDAARHYGDMVRRLLNP

Samples

Sample ID Description Type Environment
1 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
19 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
20 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
21 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
22 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
23 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
24 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
25 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
26 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
31 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
32 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
38 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
39 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
40 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
58 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
59 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
60 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
61 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
62 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
63 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
64 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
65 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
66 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
67 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
68 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
69 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
70 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
71 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
72 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
73 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
74 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
75 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
76 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
77 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
78 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
79 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
80 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
81 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
82 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
83 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
84 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
85 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
86 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
87 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
88 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
89 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
90 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
91 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
92 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
93 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
94 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
95 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
96 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
97 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
98 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
99 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
100 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
101 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
102 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
103 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
104 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
105 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
106 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
107 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
108 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
109 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
110 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
111 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.5
Rhizosphere 95
Stem 0
Stem Tuber 0
Unclassified 27.5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070688_100052816 3300005365 Bacteria 2540
2 rootH1_10016636 3300003316 Bacteria 1179
3 Ga0070658_10190099 3300005327 Bacteria 1730
4 Ga0070683_100000012 3300005329 Bacteria 274646
5 Ga0070666_10008976 3300005335 Bacteria 6223
6 Ga0070669_100000069 3300005353 Bacteria 100095
7 Ga0070659_100161881 3300005366 Unclassified 1830
8 Ga0070667_100171027 3300005367 Unclassified 1918
9 Ga0070709_10000089 3300005434 Bacteria 65260
10 Ga0070709_10002867 3300005434 Bacteria 9310
11 Ga0070709_10038806 3300005434 Bacteria 2919
12 Ga0070709_10079924 3300005434 Unclassified 2131
13 Ga0070711_100022521 3300005439 Bacteria 4085
14 Ga0070708_100014390 3300005445 Bacteria 6508
15 Ga0070708_100024901 3300005445 Bacteria 5114
16 Ga0070708_100067622 3300005445 Unclassified 3209
17 Ga0070708_100086017 3300005445 Bacteria 2855
18 Ga0070685_10009236 3300005466 Bacteria 5089
19 Ga0070685_10171933 3300005466 Bacteria 1389
20 Ga0070706_100095196 3300005467 Bacteria 2764
21 Ga0070707_100030135 3300005468 Bacteria 5163
22 Ga0070707_100049689 3300005468 Bacteria 4020
23 Ga0070698_100006687 3300005471 Bacteria 12504
24 Ga0070684_100171458 3300005535 Unclassified 1971
25 Ga0070684_100216896 3300005535 Bacteria 1745
26 Ga0070665_100000081 3300005548 Bacteria 184646
27 Ga0070665_100001049 3300005548 Bacteria 34612
28 Ga0068863_100061226 3300005841 Bacteria 3558
29 Ga0068863_100074698 3300005841 Bacteria 3207
30 Ga0068858_100023340 3300005842 Bacteria 5763
31 Ga0068862_100000147 3300005844 Bacteria 79903
32 Ga0070715_10118894 3300006163 Bacteria 1257
33 Ga0070716_100093613 3300006173 Bacteria 1825
34 Ga0075433_10099457 3300006852 Bacteria 2575
35 Ga0075433_10155494 3300006852 Bacteria 2035
36 Ga0075434_100006640 3300006871 Bacteria 10613
37 Ga0075434_100050689 3300006871 Bacteria 4124
38 Ga0075434_100056585 3300006871 Bacteria 3897
39 Ga0068865_100199659 3300006881 Unclassified 1552
40 Ga0075436_100000135 3300006914 Bacteria 44199
41 Ga0075436_100030699 3300006914 Unclassified 3698
42 Ga0105240_10004161 3300009093 Bacteria 22167
43 Ga0105245_10220259 3300009098 Bacteria 1831
44 Ga0114129_10494852 3300009147 Bacteria 1598
45 Ga0105248_10131925 3300009177 Bacteria 2819
46 Ga0105248_10183349 3300009177 Bacteria 2359
47 Ga0105238_10325320 3300009551 Bacteria 1524
48 Ga0157370_10164174 3300013104 Bacteria 2066
49 Ga0157369_10019148 3300013105 Bacteria 7662
50 Ga0157369_10285089 3300013105 Unclassified 1720
51 Ga0163162_10170796 3300013306 Unclassified 2299
52 Ga0157372_10055613 3300013307 Bacteria 4420
53 Ga0163163_10076500 3300014325 Bacteria 3342
54 Ga0157379_10308514 3300014968 Bacteria 1443
55 Ga0157376_10023524 3300014969 Bacteria 4823
56 Ga0157376_10138519 3300014969 Bacteria 2180
57 Ga0157376_10258114 3300014969 Unclassified 1631
58 Ga0213876_10014935 3300021384 Unclassified 4117
59 Ga0207680_10003939 3300025903 Bacteria 7008
60 Ga0207699_10000320 3300025906 Bacteria 25738
61 Ga0207684_10048385 3300025910 Bacteria 3606
62 Ga0207695_10008666 3300025913 Bacteria 12689
63 Ga0207695_10410836 3300025913 Unclassified 1238
64 Ga0207693_10216003 3300025915 Unclassified 1507
65 Ga0207646_10003377 3300025922 Bacteria 18062
66 Ga0207646_10163824 3300025922 Bacteria 2007
67 Ga0207681_10000034 3300025923 Bacteria 163792
68 Ga0207694_10295526 3300025924 Unclassified 1333
69 Ga0207659_10252341 3300025926 Bacteria 1432
70 Ga0207700_10191704 3300025928 Unclassified 1718
71 Ga0207704_10088065 3300025938 Unclassified 2030
72 Ga0207665_10090552 3300025939 Bacteria 2120
73 Ga0207665_10171941 3300025939 Unclassified 1565
74 Ga0207711_10392031 3300025941 Bacteria 1289
75 Ga0207641_10136735 3300026088 Unclassified 2206
76 Ga0207641_10169008 3300026088 Unclassified 1994
77 Ga0207683_10179568 3300026121 Bacteria 1919
78 Ga0207683_10290811 3300026121 Unclassified 1494
79 Ga0268266_10000490 3300028379 Bacteria 56757
80 Ga0268266_10000562 3300028379 Bacteria 51744
81 Ga0268265_10000335 3300028380 Bacteria 51104
82 Ga0265323_10000235 3300028653 Bacteria 32680
83 Ga0265316_10018913 3300031344 Bacteria 5912
84 Ga0265316_10023123 3300031344 Bacteria 5226
85 Ga0265316_10069841 3300031344 Bacteria 2710
86 Ga0265316_10140835 3300031344 Unclassified 1812
87 Ga0307508_10083152 3300031616 Bacteria 2783
88 Ga0265314_10003062 3300031711 Bacteria 16483
89 Ga0373935_0002147 3300035692 Bacteria 11182
90 Ga0373927_0117445 3300035695 Bacteria 1735
91 Ga0373947_0282297 3300035725 Unclassified 1104
92 Ga0373937_0126791 3300036401 Bacteria 2382
93 Ga0373937_0183527 3300036401 Unclassified 1965
94 Ga0373937_0332059 3300036401 Unclassified 1439
95 Ga0436365_1282843 3300039437 Bacteria 2092
96 Ga0451577_0036246 3300042876 Bacteria 4441
97 Ga0466963_0057354 3300044694 Bacteria 2594
98 Ga0466963_0151561 3300044694 Bacteria 1610
99 Ga0451576_0028629 3300045051 Bacteria 5965
100 Ga0451576_0073083 3300045051 Bacteria 3569
101 Ga0451576_0213170 3300045051 Unclassified 2017
102 Ga0495592_0031082 3300046454 Unclassified 4037
103 Ga0495603_0005493 3300046455 Bacteria 7566
104 Ga0495641_0057068 3300046461 Unclassified 1769
105 Ga0495651_0024614 3300046462 Bacteria 4682
106 Ga0495653_0056789 3300046463 Unclassified 2982
107 Ga0495580_0000370 3300046472 Bacteria 36733
108 Ga0495580_0013635 3300046472 Bacteria 6197
109 Ga0495580_0073461 3300046472 Bacteria 2388
110 Ga0495582_0002133 3300046473 Bacteria 11048
111 Ga0495662_0016863 3300046476 Bacteria 3535
112 Ga0495662_0025940 3300046476 Bacteria 2831
113 Ga0495664_0016022 3300046477 Unclassified 4268
114 Ga0495608_0014758 3300046511 Bacteria 5421
115 Ga0495628_0026250 3300046516 Bacteria 4753
116 Ga0495652_0045537 3300046529 Unclassified 3770
117 Ga0495665_0222284 3300046531 Unclassified 976
118 Ga0495640_0070422 3300046533 Unclassified 2350
119 Ga0495586_0021753 3300046535 Bacteria 3421
120 Ga0495587_0024415 3300046536 Bacteria 3705
121 Ga0495645_0005971 3300046543 Bacteria 8422
122 Ga0495599_0020383 3300046678 Bacteria 4129
123 Ga0495646_0013626 3300046680 Bacteria 5169
124 Ga0495658_0095000 3300046683 Bacteria 1771
125 Ga0495613_0105280 3300046689 Unclassified 2036
126 Ga0495613_0119344 3300046689 Unclassified 1894
127 Ga0495581_0016814 3300047315 Bacteria 4252
128 Ga0495604_0044577 3300047317 Unclassified 3464
129 Ga0495604_0095752 3300047317 Unclassified 2192
130 Ga0495604_0113586 3300047317 Bacteria 1971
131 Ga0495674_0102903 3300047319 Unclassified 2428
132 Ga0495674_0372642 3300047319 Archaea 1156
133 Ga0495680_0048694 3300047322 Bacteria 3327
134 Ga0495680_0058799 3300047322 Unclassified 2969
135 Ga0495675_0031988 3300047444 Unclassified 3359
136 Ga0495675_0080044 3300047444 Unclassified 2058
137 Ga0495684_0001649 3300047471 Bacteria 17928
138 Ga0495684_0012782 3300047471 Bacteria 6479
139 Ga0495684_0075361 3300047471 Unclassified 2563
140 Ga0495602_0051520 3300048088 Bacteria 3665
141 Ga0495614_0039547 3300048089 Unclassified 2024
142 Ga0496100_0151672 3300048903 Unclassified 1654
143 Ga0496114_0000203 3300048917 Bacteria 43483
144 Ga0496115_0008334 3300048918 Bacteria 7667
145 Ga0496115_0214838 3300048918 Bacteria 1588
146 Ga0501067_0014061 3300049583 Unclassified 4434
147 Ga0501068_0011440 3300049584 Bacteria 5012
148 Ga0501075_0007386 3300049591 Bacteria 7625
149 Ga0501077_0000147 3300049593 Bacteria 38948
150 Ga0501080_0032759 3300049742 Bacteria 4848
151 Ga0501080_0043855 3300049742 Bacteria 4165
152 Ga0501083_0007579 3300049744 Bacteria 7689
153 nmdc:mga05p37_262489_c1 3300050507 Bacteria 2066
154 nmdc:mga0n895_13461_c1 3300050512 Bacteria 7380
155 nmdc:mga0n895_438421_c1 3300050512 Bacteria 1320
156 nmdc:mga0rr50_102803_c1 3300050513 Bacteria 2248
157 nmdc:mga0rr50_37607_c1 3300050513 Bacteria 3495
158 nmdc:mga08x19_1178_c1 3300050514 Bacteria 16379
159 nmdc:mga0a205_26091_c1 3300050515 Bacteria 5567
160 nmdc:mga0a205_487228_c1 3300050515 Bacteria 1091
161 Ga0070688_100052816
162 rootH1_10016636
163 Ga0070658_10190099
164 Ga0070683_100000012
165 Ga0070666_10008976
166 Ga0070669_100000069
167 Ga0070659_100161881
168 Ga0070667_100171027
169 Ga0070709_10000089
170 Ga0070709_10002867
171 Ga0070709_10038806
172 Ga0070709_10079924
173 Ga0070711_100022521
174 Ga0070708_100014390
175 Ga0070708_100024901
176 Ga0070708_100067622
177 Ga0070708_100086017
178 Ga0070685_10009236
179 Ga0070685_10171933
180 Ga0070706_100095196
181 Ga0070707_100030135
182 Ga0070707_100049689
183 Ga0070698_100006687
184 Ga0070684_100171458
185 Ga0070684_100216896
186 Ga0070665_100000081
187 Ga0070665_100001049
188 Ga0068863_100061226
189 Ga0068863_100074698
190 Ga0068858_100023340
191 Ga0068862_100000147
192 Ga0070715_10118894
193 Ga0070716_100093613
194 Ga0075433_10099457
195 Ga0075433_10155494
196 Ga0075434_100006640
197 Ga0075434_100050689
198 Ga0075434_100056585
199 Ga0068865_100199659
200 Ga0075436_100000135
201 Ga0075436_100030699
202 Ga0105240_10004161
203 Ga0105245_10220259
204 Ga0114129_10494852
205 Ga0105248_10131925
206 Ga0105248_10183349
207 Ga0105238_10325320
208 Ga0157370_10164174
209 Ga0157369_10019148
210 Ga0157369_10285089
211 Ga0163162_10170796
212 Ga0157372_10055613
213 Ga0163163_10076500
214 Ga0157379_10308514
215 Ga0157376_10023524
216 Ga0157376_10138519
217 Ga0157376_10258114
218 Ga0213876_10014935
219 Ga0207680_10003939
220 Ga0207699_10000320
221 Ga0207684_10048385
222 Ga0207695_10008666
223 Ga0207695_10410836
224 Ga0207693_10216003
225 Ga0207646_10003377
226 Ga0207646_10163824
227 Ga0207681_10000034
228 Ga0207694_10295526
229 Ga0207659_10252341
230 Ga0207700_10191704
231 Ga0207704_10088065
232 Ga0207665_10090552
233 Ga0207665_10171941
234 Ga0207711_10392031
235 Ga0207641_10136735
236 Ga0207641_10169008
237 Ga0207683_10179568
238 Ga0207683_10290811
239 Ga0268266_10000490
240 Ga0268266_10000562
241 Ga0268265_10000335
242 Ga0265323_10000235
243 Ga0265316_10018913
244 Ga0265316_10023123
245 Ga0265316_10069841
246 Ga0265316_10140835
247 Ga0307508_10083152
248 Ga0265314_10003062
249 Ga0373935_0002147
250 Ga0373927_0117445
251 Ga0373947_0282297
252 Ga0373937_0126791
253 Ga0373937_0183527
254 Ga0373937_0332059
255 Ga0436365_1282843
256 Ga0451577_0036246
257 Ga0466963_0057354
258 Ga0466963_0151561
259 Ga0451576_0028629
260 Ga0451576_0073083
261 Ga0451576_0213170
262 Ga0495592_0031082
263 Ga0495603_0005493
264 Ga0495641_0057068
265 Ga0495651_0024614
266 Ga0495653_0056789
267 Ga0495580_0000370
268 Ga0495580_0013635
269 Ga0495580_0073461
270 Ga0495582_0002133
271 Ga0495662_0016863
272 Ga0495662_0025940
273 Ga0495664_0016022
274 Ga0495608_0014758
275 Ga0495628_0026250
276 Ga0495652_0045537
277 Ga0495665_0222284
278 Ga0495640_0070422
279 Ga0495586_0021753
280 Ga0495587_0024415
281 Ga0495645_0005971
282 Ga0495599_0020383
283 Ga0495646_0013626
284 Ga0495658_0095000
285 Ga0495613_0105280
286 Ga0495613_0119344
287 Ga0495581_0016814
288 Ga0495604_0044577
289 Ga0495604_0095752
290 Ga0495604_0113586
291 Ga0495674_0102903
292 Ga0495674_0372642
293 Ga0495680_0048694
294 Ga0495680_0058799
295 Ga0495675_0031988
296 Ga0495675_0080044
297 Ga0495684_0001649
298 Ga0495684_0012782
299 Ga0495684_0075361
300 Ga0495602_0051520
301 Ga0495614_0039547
302 Ga0496100_0151672
303 Ga0496114_0000203
304 Ga0496115_0008334
305 Ga0496115_0214838
306 Ga0501067_0014061
307 Ga0501068_0011440
308 Ga0501075_0007386
309 Ga0501077_0000147
310 Ga0501080_0032759
311 Ga0501080_0043855
312 Ga0501083_0007579
313 nmdc:mga05p37_262489_c1
314 nmdc:mga0n895_13461_c1
315 nmdc:mga0n895_438421_c1
316 nmdc:mga0rr50_102803_c1
317 nmdc:mga0rr50_37607_c1
318 nmdc:mga08x19_1178_c1
319 nmdc:mga0a205_26091_c1
320 nmdc:mga0a205_487228_c1

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07687

M20_dimer

Peptidase dimerisation domain

183

285

0.9

PF01546

Peptidase_M20

Peptidase family M20/M25/M40

92

360

0.85

PF04389

Peptidase_M28

Peptidase family M28

81

205

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
1vgy-assembly1.cif.gz_B crystal structure of succinyl diaminopimelate desuccinylase 0.8634 3 334
4ppz-assembly1.cif.gz_A crystal structure of zinc-bound succinyl-diaminopimelate desuccinylase from neisseria meningitidis mc58 0.8589 3 334
7lgp-assembly1.cif.gz_A dape enzyme from shigella flexneri 0.8507 3 334
1vgy-assembly1.cif.gz_B crystal structure of succinyl diaminopimelate desuccinylase 0.8491 3 334
4ppz-assembly1.cif.gz_A crystal structure of zinc-bound succinyl-diaminopimelate desuccinylase from neisseria meningitidis mc58 0.8448 3 334
ID Description Score Start End Superfamily
af_Q18621_173_267_3.30.70.360 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9201 165 255 3.30.70.360
af_Q18621_6_172_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9038 3 151 3.40.630.10
af_P65807_191_290_3.30.70.360 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8809 167 255 3.30.70.360
af_Q18621_173_267_3.30.70.360 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8752 165 255 3.30.70.360
af_Q9C5C4_210_325_3.30.70.360 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8711 161 257 3.30.70.360
ID Description Score Start End GO Terms
AF-A0A7S7SKS6-F1-model_v4 M20/M25/M40 family metallo-hydrolase 0.9543 1 337 GO:0016787
GO:0046872
AF-A0A7S7SKS6-F1-model_v4 M20/M25/M40 family metallo-hydrolase 0.9515 1 337 GO:0016787
GO:0046872
AF-A0A7W0LFB2-F1-model_v4 M20/M25/M40 family metallo-hydrolase 0.9437 5 141 GO:0016787
AF-A0A433QGB1-F1-model_v4 Putative peptidase 0.9367 1 337 GO:0016787
GO:0046872
AF-A0A433QGB1-F1-model_v4 Putative peptidase 0.934 1 337 GO:0016787
GO:0046872

Map