F231597

General Info

Members Datasets Scaffolds Average Seq Length
159 116 318 654

Family's Representative Sequence

Representative Sequence 3300005468|Ga0070707_100017612|Ga0070707_1000176122
Length 709
Sequence VASTSQPASSSVPHSKKQGVSLYQFFAPSGVLSRRHPAYEFRRGQLQMAQAVEQALADKRHLIVEAGTGTGKTLAYLLPVIRSGKRVIISTGTKNLQEQLFYKDIPFLEPLFPSGEGKRGAPGTPGIGVPASNLNVCYMKGRNNYLCRKKLYDLTNQPVLSGLEEIEHYRAIAAWEKTTQTGDRAELAALPEASALWFKLDARADTCLGQKCSQWDRCFITEMHRRAVESDIIIVNHHLFFADLAIKQQAEYAPDAGILPDVGTVIFDEAHELEDVAGSYFGISVSNARLEELCRDVEASLQRNRMLSTALSGALKSLRERAMFFFALLPQGEGRFAFENRREFLEENGDEFLALQQSLRRLGSELENLPSKPEEIFNFVRRAQELQVQLGFLMESEDRNTVFWIERRGTRGGPGFSRADSGNLEKGASAPEGRSFRGRGSSNVFLQATPIDVAPILKTCLFDKLDCAVLTSATLAVGGGFEYMRRRLGLDHARELVLPSHFDYENQALLYVPPDLPDPRTPQFAAKAADRIRRLLEITRGRAFVLFTSYAQMNDVYQRLLGEMEFPMFLQGDAPKSALLEEFRLTPNAVLFATSSFWQGVDVQGEQLSCVVIDRLPFAVPSDPVVAARVKSIDAEGGNAFFQYQVPAAVITLKQGFGRLIRSLNDRGLLALLDNRILKKAYGQVFVESLPNYRRTTDMREVEEFFGAG

Samples

Sample ID Description Type Environment
1 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
28 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
29 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
30 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
31 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
42 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
43 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
44 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
62 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
63 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
64 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
65 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
66 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
67 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
68 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
69 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
70 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
71 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
72 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
73 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
74 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
75 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
76 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
77 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
78 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
79 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
80 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
81 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
82 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
83 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
84 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
85 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
86 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
87 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
88 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
89 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
90 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
91 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
92 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
93 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
94 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
95 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
103 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
104 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
105 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
106 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
107 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
108 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
109 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
110 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
111 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
112 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
113 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
114 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
115 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
116 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.26
Nodule 0
Rhizoplane 7.55
Rhizosphere 88.05
Stem 0
Stem Tuber 0
Unclassified 4.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070707_100017612 3300005468 Bacteria 6719
2 Ga0065704_10072260 3300005289 Bacteria 8837
3 Ga0070683_100031525 3300005329 Bacteria 4821
4 Ga0070683_100105600 3300005329 Bacteria 2655
5 Ga0068868_100008537 3300005338 Bacteria 7336
6 Ga0070660_100023555 3300005339 Bacteria 4561
7 Ga0070671_100027544 3300005355 Bacteria 4678
8 Ga0070667_100067269 3300005367 Bacteria 3045
9 Ga0070714_100003215 3300005435 Bacteria 12154
10 Ga0070714_100042375 3300005435 Unclassified 3845
11 Ga0070713_100012582 3300005436 Bacteria 6214
12 Ga0070713_100024723 3300005436 Bacteria 4685
13 Ga0070713_100026056 3300005436 Bacteria 4584
14 Ga0070713_100101449 3300005436 Bacteria 2493
15 Ga0070710_10008895 3300005437 Bacteria 4902
16 Ga0070711_100051084 3300005439 Bacteria 2838
17 Ga0070708_100049915 3300005445 Bacteria 3703
18 Ga0070681_10006600 3300005458 Bacteria 11299
19 Ga0070681_10108418 3300005458 Bacteria 2717
20 Ga0070706_100076059 3300005467 Bacteria 3108
21 Ga0070707_100000489 3300005468 Bacteria 39270
22 Ga0070707_100034870 3300005468 Bacteria 4798
23 Ga0070699_100048477 3300005518 Bacteria 3676
24 Ga0070699_100111809 3300005518 Bacteria 2399
25 Ga0070679_100005720 3300005530 Bacteria 11527
26 Ga0070672_100039213 3300005543 Bacteria 3626
27 Ga0070664_100022630 3300005564 Bacteria 5182
28 Ga0068854_100023290 3300005578 Bacteria 4229
29 Ga0068856_100050103 3300005614 Bacteria 4116
30 Ga0068864_100097142 3300005618 Bacteria 2608
31 Ga0068860_100014302 3300005843 Bacteria 7782
32 Ga0068860_100023872 3300005843 Bacteria 5911
33 Ga0081455_10006694 3300005937 Bacteria 12315
34 Ga0081538_10003276 3300005981 Bacteria 15372
35 Ga0081538_10004664 3300005981 Bacteria 12568
36 Ga0081538_10008127 3300005981 Bacteria 8954
37 Ga0081538_10031741 3300005981 Bacteria 3555
38 Ga0081539_10002241 3300005985 Bacteria 28133
39 Ga0070717_10002333 3300006028 Bacteria 13356
40 Ga0070717_10021686 3300006028 Bacteria 5065
41 Ga0075363_100009952 3300006048 Bacteria 4489
42 Ga0070716_100000157 3300006173 Bacteria 27050
43 Ga0070712_100010294 3300006175 Bacteria 5895
44 Ga0075366_10004195 3300006195 Bacteria 7729
45 Ga0097621_100000415 3300006237 Bacteria 29789
46 Ga0068871_100017975 3300006358 Bacteria 5364
47 Ga0075430_100029128 3300006846 Bacteria 4687
48 Ga0075434_100002352 3300006871 Bacteria 16555
49 Ga0075436_100062633 3300006914 Bacteria 2571
50 Ga0105240_10000381 3300009093 Bacteria 83148
51 Ga0105240_10035570 3300009093 Bacteria 6417
52 Ga0105245_10000384 3300009098 Bacteria 41154
53 Ga0105237_10000591 3300009545 Bacteria 50563
54 Ga0105237_10028686 3300009545 Bacteria 5666
55 Ga0105238_10036067 3300009551 Bacteria 5026
56 Ga0105239_10028744 3300010375 Bacteria 6113
57 Ga0105239_10060258 3300010375 Bacteria 4165
58 Ga0157373_10063926 3300013100 Bacteria 2605
59 Ga0157369_10072526 3300013105 Bacteria 3696
60 Ga0157374_10077794 3300013296 Bacteria 3140
61 Ga0157378_10002539 3300013297 Bacteria 16244
62 Ga0157372_10056117 3300013307 Bacteria 4401
63 Ga0157372_10079845 3300013307 Bacteria 3701
64 Ga0163163_10002295 3300014325 Bacteria 16141
65 Ga0207707_10008759 3300025912 Bacteria 8781
66 Ga0207707_10110089 3300025912 Bacteria 2407
67 Ga0207695_10002192 3300025913 Bacteria 29480
68 Ga0207695_10013398 3300025913 Bacteria 9781
69 Ga0207693_10003587 3300025915 Bacteria 13255
70 Ga0207693_10004669 3300025915 Bacteria 11542
71 Ga0207693_10037631 3300025915 Bacteria 3813
72 Ga0207663_10008373 3300025916 Bacteria 5402
73 Ga0207663_10016267 3300025916 Bacteria 4120
74 Ga0207660_10015960 3300025917 Bacteria 4965
75 Ga0207657_10006780 3300025919 Bacteria 11825
76 Ga0207646_10000175 3300025922 Bacteria 86807
77 Ga0207694_10039840 3300025924 Bacteria 3616
78 Ga0207700_10003879 3300025928 Bacteria 8741
79 Ga0207700_10006756 3300025928 Bacteria 6968
80 Ga0207664_10003958 3300025929 Bacteria 9971
81 Ga0207665_10000085 3300025939 Bacteria 60799
82 Ga0207691_10078723 3300025940 Bacteria 2967
83 Ga0207677_10003729 3300026023 Bacteria 8084
84 Ga0207674_10020941 3300026116 Bacteria 7054
85 Ga0265316_10001256 3300031344 Bacteria 27233
86 Ga0265316_10086334 3300031344 Bacteria 2399
87 Ga0373935_0028802 3300035692 Unclassified 3433
88 Ga0373927_0002301 3300035695 Bacteria 13965
89 Ga0373947_0026369 3300035725 Bacteria 3396
90 Ga0373937_0000215 3300036401 Bacteria 55874
91 Ga0373937_0021431 3300036401 Bacteria 5801
92 Ga0373925_0080707 3300037068 Bacteria 2472
93 Ga0395898_0068010 3300037466 Bacteria 3448
94 Ga0436364_1246322 3300037853 Bacteria 11204
95 Ga0436365_0206612 3300039437 Bacteria 2820
96 Ga0436363_0225617 3300039450 Bacteria 7036
97 Ga0436363_0480509 3300039450 Bacteria 2368
98 Ga0436363_1587244 3300039450 Bacteria 4692
99 Ga0436362_0066512 3300039453 Bacteria 5322
100 Ga0436362_0304951 3300039453 Bacteria 2519
101 Ga0450908_001212 3300042184 Bacteria 4998
102 Ga0453683_0023259 3300044673 Unclassified 3950
103 Ga0466963_0001898 3300044694 Bacteria 11422
104 Ga0466957_0000095 3300044842 Bacteria 35601
105 Ga0466959_0017701 3300045049 Bacteria 5227
106 Ga0466967_0000092 3300045976 Bacteria 32053
107 Ga0466967_0001281 3300045976 Bacteria 14293
108 Ga0495592_0004819 3300046454 Bacteria 9918
109 Ga0495592_0053243 3300046454 Bacteria 3003
110 Ga0495651_0012344 3300046462 Bacteria 6584
111 Ga0495651_0019460 3300046462 Bacteria 5263
112 Ga0495580_0000667 3300046472 Bacteria 29197
113 Ga0495580_0000904 3300046472 Bacteria 25856
114 Ga0495580_0001301 3300046472 Bacteria 22045
115 Ga0495580_0045153 3300046472 Bacteria 3131
116 Ga0495630_0031709 3300046517 Unclassified 3936
117 Ga0495599_0079135 3300046678 Bacteria 2053
118 Ga0495623_0009033 3300046679 Bacteria 6465
119 Ga0495669_0012381 3300046684 Bacteria 3631
120 Ga0495600_0013985 3300046809 Bacteria 5057
121 Ga0495581_0036370 3300047315 Bacteria 2849
122 Ga0495604_0017713 3300047317 Bacteria 5701
123 Ga0495684_0031080 3300047471 Bacteria 4099
124 Ga0496104_0034804 3300048907 Bacteria 4699
125 Ga0496105_0058267 3300048908 Unclassified 3188
126 Ga0496109_0000137 3300048912 Bacteria 73456
127 Ga0496110_0013011 3300048913 Bacteria 6864
128 Ga0496110_0082083 3300048913 Bacteria 2874
129 Ga0496112_0004388 3300048915 Bacteria 11936
130 Ga0496112_0006154 3300048915 Bacteria 10491
131 Ga0496112_0047879 3300048915 Bacteria 4193
132 Ga0496112_0097776 3300048915 Bacteria 2906
133 Ga0496113_0000843 3300048916 Bacteria 16055
134 Ga0496113_0012441 3300048916 Bacteria 5718
135 Ga0496113_0067412 3300048916 Bacteria 2713
136 Ga0501031_0023494 3300049568 Bacteria 4019
137 Ga0501032_0001165 3300049569 Bacteria 21094
138 Ga0501033_0038786 3300049570 Unclassified 3558
139 Ga0501037_0051584 3300049573 Unclassified 3008
140 Ga0501038_0009071 3300049574 Bacteria 9132
141 Ga0501046_0011097 3300049580 Bacteria 7713
142 Ga0501047_0105099 3300049581 Bacteria 2704
143 Ga0501067_0000907 3300049583 Bacteria 15936
144 Ga0501068_0001120 3300049584 Bacteria 14174
145 Ga0501070_0043195 3300049586 Bacteria 3751
146 Ga0501072_0080715 3300049588 Bacteria 2577
147 Ga0501073_0000471 3300049589 Bacteria 27854
148 Ga0501074_0017378 3300049590 Bacteria 5218
149 Ga0501077_0005967 3300049593 Bacteria 7441
150 Ga0501079_0005210 3300049741 Bacteria 9660
151 Ga0501080_0000006 3300049742 Bacteria 138444
152 Ga0501044_0003783 3300049823 Bacteria 16989
153 Ga0501044_0005555 3300049823 Bacteria 14001
154 nmdc:mga0qj67_25948_c1 3300050509 Bacteria 4532
155 nmdc:mga0n895_3625_c1 3300050512 Bacteria 12480
156 nmdc:mga08x19_15964_c1 3300050514 Bacteria 4576
157 nmdc:mga08x19_35094_c1 3300050514 Bacteria 3172
158 Ga0501084_0000747 3300054114 Bacteria 24758
159 Ga0501082_0016943 3300060353 Bacteria 6273
160 Ga0070707_100017612
161 Ga0065704_10072260
162 Ga0070683_100031525
163 Ga0070683_100105600
164 Ga0068868_100008537
165 Ga0070660_100023555
166 Ga0070671_100027544
167 Ga0070667_100067269
168 Ga0070714_100003215
169 Ga0070714_100042375
170 Ga0070713_100012582
171 Ga0070713_100024723
172 Ga0070713_100026056
173 Ga0070713_100101449
174 Ga0070710_10008895
175 Ga0070711_100051084
176 Ga0070708_100049915
177 Ga0070681_10006600
178 Ga0070681_10108418
179 Ga0070706_100076059
180 Ga0070707_100000489
181 Ga0070707_100034870
182 Ga0070699_100048477
183 Ga0070699_100111809
184 Ga0070679_100005720
185 Ga0070672_100039213
186 Ga0070664_100022630
187 Ga0068854_100023290
188 Ga0068856_100050103
189 Ga0068864_100097142
190 Ga0068860_100014302
191 Ga0068860_100023872
192 Ga0081455_10006694
193 Ga0081538_10003276
194 Ga0081538_10004664
195 Ga0081538_10008127
196 Ga0081538_10031741
197 Ga0081539_10002241
198 Ga0070717_10002333
199 Ga0070717_10021686
200 Ga0075363_100009952
201 Ga0070716_100000157
202 Ga0070712_100010294
203 Ga0075366_10004195
204 Ga0097621_100000415
205 Ga0068871_100017975
206 Ga0075430_100029128
207 Ga0075434_100002352
208 Ga0075436_100062633
209 Ga0105240_10000381
210 Ga0105240_10035570
211 Ga0105245_10000384
212 Ga0105237_10000591
213 Ga0105237_10028686
214 Ga0105238_10036067
215 Ga0105239_10028744
216 Ga0105239_10060258
217 Ga0157373_10063926
218 Ga0157369_10072526
219 Ga0157374_10077794
220 Ga0157378_10002539
221 Ga0157372_10056117
222 Ga0157372_10079845
223 Ga0163163_10002295
224 Ga0207707_10008759
225 Ga0207707_10110089
226 Ga0207695_10002192
227 Ga0207695_10013398
228 Ga0207693_10003587
229 Ga0207693_10004669
230 Ga0207693_10037631
231 Ga0207663_10008373
232 Ga0207663_10016267
233 Ga0207660_10015960
234 Ga0207657_10006780
235 Ga0207646_10000175
236 Ga0207694_10039840
237 Ga0207700_10003879
238 Ga0207700_10006756
239 Ga0207664_10003958
240 Ga0207665_10000085
241 Ga0207691_10078723
242 Ga0207677_10003729
243 Ga0207674_10020941
244 Ga0265316_10001256
245 Ga0265316_10086334
246 Ga0373935_0028802
247 Ga0373927_0002301
248 Ga0373947_0026369
249 Ga0373937_0000215
250 Ga0373937_0021431
251 Ga0373925_0080707
252 Ga0395898_0068010
253 Ga0436364_1246322
254 Ga0436365_0206612
255 Ga0436363_0225617
256 Ga0436363_0480509
257 Ga0436363_1587244
258 Ga0436362_0066512
259 Ga0436362_0304951
260 Ga0450908_001212
261 Ga0453683_0023259
262 Ga0466963_0001898
263 Ga0466957_0000095
264 Ga0466959_0017701
265 Ga0466967_0000092
266 Ga0466967_0001281
267 Ga0495592_0004819
268 Ga0495592_0053243
269 Ga0495651_0012344
270 Ga0495651_0019460
271 Ga0495580_0000667
272 Ga0495580_0000904
273 Ga0495580_0001301
274 Ga0495580_0045153
275 Ga0495630_0031709
276 Ga0495599_0079135
277 Ga0495623_0009033
278 Ga0495669_0012381
279 Ga0495600_0013985
280 Ga0495581_0036370
281 Ga0495604_0017713
282 Ga0495684_0031080
283 Ga0496104_0034804
284 Ga0496105_0058267
285 Ga0496109_0000137
286 Ga0496110_0013011
287 Ga0496110_0082083
288 Ga0496112_0004388
289 Ga0496112_0006154
290 Ga0496112_0047879
291 Ga0496112_0097776
292 Ga0496113_0000843
293 Ga0496113_0012441
294 Ga0496113_0067412
295 Ga0501031_0023494
296 Ga0501032_0001165
297 Ga0501033_0038786
298 Ga0501037_0051584
299 Ga0501038_0009071
300 Ga0501046_0011097
301 Ga0501047_0105099
302 Ga0501067_0000907
303 Ga0501068_0001120
304 Ga0501070_0043195
305 Ga0501072_0080715
306 Ga0501073_0000471
307 Ga0501074_0017378
308 Ga0501077_0005967
309 Ga0501079_0005210
310 Ga0501080_0000006
311 Ga0501044_0003783
312 Ga0501044_0005555
313 nmdc:mga0qj67_25948_c1
314 nmdc:mga0n895_3625_c1
315 nmdc:mga08x19_15964_c1
316 nmdc:mga08x19_35094_c1
317 Ga0501084_0000747
318 Ga0501082_0016943

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13307

Helicase_C_2

Helicase C-terminal domain

532

693

0.98

PF00270

DEAD

DEAD/DEAH box helicase

45

108

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
6fwr-assembly1.cif.gz_A structure of ding in complex with ssdna 0.775 4 633
8pop-assembly1.cif.gz_B hk97 small terminase in complex with dna 0.7747 294 360
6z6e-assembly1.cif.gz_A-2 crystal structure of the hk97 bacteriophage small terminase 0.7736 300 363
6z6e-assembly1.cif.gz_A-3 crystal structure of the hk97 bacteriophage small terminase 0.7736 300 363
8pop-assembly1.cif.gz_F hk97 small terminase in complex with dna 0.7715 294 360
ID Description Score Start End Superfamily
af_P76257_437_627_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9515 450 637 3.40.50.300
af_P9WMR5_468_655_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9355 456 639 3.40.50.300
af_P76257_437_627_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9324 450 637 3.40.50.300
af_P9WMR5_468_655_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8927 456 639 3.40.50.300
af_P27296_503_687_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8924 449 626 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A1H6F5P9-F1-model_v4 ATP-dependent helicase C-terminal domain-containing protein 0.9694 500 639 GO:0003676
GO:0003678
GO:0005524
GO:0006281
GO:0016818
AF-A0A523LQM8-F1-model_v4 ATP-dependent DNA helicase 0.9673 500 639 GO:0003676
GO:0003678
GO:0005524
GO:0006281
GO:0016818
AF-A0A535KRF5-F1-model_v4 ATP-dependent helicase C-terminal domain-containing protein 0.9654 406 639 GO:0003676
GO:0003678
GO:0005524
GO:0006139
GO:0006974
GO:0016818
AF-A0A7R9R673-F1-model_v4 deleted 0.9648 412 639
AF-A0A661BEN4-F1-model_v4 ATP-dependent DNA helicase 0.9633 419 639 GO:0003676
GO:0003678
GO:0005524
GO:0006281
GO:0016818

Map