F227417

General Info

Members Datasets Scaffolds Average Seq Length
157 115 314 905

Family's Representative Sequence

Representative Sequence 3300025915|Ga0207693_10008234|Ga0207693_100082346
Length 942
Sequence MGRHGPSWIGGNDPVVCAMSLLLPDDRLRERAAIAADQLAPLANGLAAELAPAYERELFVPREKAVLSRDGGRCPLDGAMLDFDPFSPHQHRCPVCGKVYSGEAHYRNWIYRYHLWLAERAVHAALFHSLEIAGPSGSYFSVGAAASFASAILVCYADQYLLYPNSDNVLGPTRPFFSTYLESIWLLNLCIAVDLLERRDRRTTPLGARVRDRIIEPSASLIASYDEGASNRQVWNAAALAAANRLLDRNELVERALFGRGGIANHIEKGLLADGTWYEGENYHLFAHRGLWYGVTMAEAAGLSFPSPLLARFQEGFATPFLSSLPDMTLPSRRDSQYAISLRQPRFAELCELGLAREADEGDIRLRNVLRRLYMDDVPRRDTGRAQSTADVERNLPGTRLTRADLGWRSLLFARPKLPPLDSAPLGSVNLGAQGLAVFRRANERVYVALDYGCSGGGHGHPDRLNVLLSDGETRWLDDMGTGSYVDPSLHWYRSTLAHNAPLFNGQEQQRVDGELLAFEELGEAGWVSARALDLSPGVAAMRTLVVMDDYVLDELAWQWMRPGVMDLPIHVDLASLKIRRFVPDEELRLHEADPPLADTMQALADVSVRWLAARSAARLTARDGDRTLHGVLMSSSNAVIYHATAPGAPGRGRRPLLILRVATAGETAWVRTVWSWSDAVETTWVDPDDATTVERRDGSHDRHVQTVANYRVERVSPSGSRTYDLGGRAPLSRKKRRSRVDAASVLRAELVVGRAASFELGECEYRRSEESWEDAGRPSARLELLYEPNELLIDVVVRKSGDFTFVSGGAVNPYDNESPDINGDGVQLYLADDSGASAWVLVPELDGEGLVRARAIDGWPTPRQIITTWKRVEGGYAIQVRLPIAPSPDAEFQLGIAVNEKPLGRERRRGQLVLGGARGEFVYLRGDREDRGSLPRIVIAG

Samples

Sample ID Description Type Environment
1 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
65 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
66 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
67 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
68 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
69 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
70 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
71 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
72 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
73 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
74 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
75 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
76 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
77 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
78 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
79 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
81 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
82 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
83 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
84 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
85 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
86 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
87 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
88 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
89 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
90 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
91 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
92 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
93 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
94 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
95 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
96 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
97 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
98 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
99 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
100 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
101 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
102 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
103 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
104 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
105 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
106 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
107 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
108 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
109 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
110 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
112 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
113 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
114 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
115 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.64
Rhizosphere 98.09
Stem 0
Stem Tuber 0
Unclassified 7.64

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207693_10008234 3300025915 Bacteria 8535
2 Ga0070658_10006760 3300005327 Bacteria 9283
3 Ga0070658_10017702 3300005327 Bacteria 5700
4 Ga0070683_100011707 3300005329 Bacteria 7595
5 Ga0070683_100022920 3300005329 Bacteria 5582
6 Ga0070670_100017621 3300005331 Bacteria 6130
7 Ga0070680_100006728 3300005336 Bacteria 8758
8 Ga0070680_100007695 3300005336 Bacteria 8220
9 Ga0070689_100015132 3300005340 Bacteria 5620
10 Ga0070691_10001913 3300005341 Bacteria 9134
11 Ga0070661_100017454 3300005344 Bacteria 5092
12 Ga0070668_100019616 3300005347 Bacteria 5090
13 Ga0070669_100000283 3300005353 Bacteria 40240
14 Ga0070713_100001085 3300005436 Bacteria 17414
15 Ga0070713_100009334 3300005436 Bacteria 7015
16 Ga0070708_100000576 3300005445 Bacteria 27492
17 Ga0070681_10003780 3300005458 Bacteria 14226
18 Ga0070679_100001774 3300005530 Bacteria 19432
19 Ga0070679_100086949 3300005530 Bacteria 3113
20 Ga0070684_100014226 3300005535 Bacteria 6439
21 Ga0070684_100018858 3300005535 Bacteria 5695
22 Ga0070684_100055285 3300005535 Bacteria 3459
23 Ga0070693_100013106 3300005547 Unclassified 4215
24 Ga0068855_100023763 3300005563 Bacteria 7342
25 Ga0068855_100049262 3300005563 Bacteria 4969
26 Ga0070664_100015409 3300005564 Bacteria 6251
27 Ga0070664_100016467 3300005564 Bacteria 6060
28 Ga0068857_100074275 3300005577 Bacteria 3030
29 Ga0068863_100023099 3300005841 Bacteria 5943
30 Ga0068862_100000923 3300005844 Bacteria 28408
31 Ga0070717_10002822 3300006028 Bacteria 12294
32 Ga0070712_100032989 3300006175 Unclassified 3499
33 Ga0075428_100017336 3300006844 Bacteria 7960
34 Ga0075430_100005109 3300006846 Bacteria 11045
35 Ga0075430_100005726 3300006846 Bacteria 10482
36 Ga0075430_100011887 3300006846 Bacteria 7410
37 Ga0075431_100017464 3300006847 Bacteria 7293
38 Ga0075429_100024982 3300006880 Bacteria 5187
39 Ga0075436_100021697 3300006914 Unclassified 4406
40 Ga0105240_10004692 3300009093 Bacteria 20658
41 Ga0111539_10006498 3300009094 Bacteria 15061
42 Ga0111539_10013705 3300009094 Bacteria 10128
43 Ga0114129_10053577 3300009147 Bacteria 5658
44 Ga0114129_10077573 3300009147 Unclassified 4620
45 Ga0105248_10021530 3300009177 Bacteria 7141
46 Ga0105248_10080022 3300009177 Bacteria 3672
47 Ga0105237_10041763 3300009545 Bacteria 4625
48 Ga0105238_10065770 3300009551 Bacteria 3627
49 Ga0105249_10000089 3300009553 Bacteria 131175
50 Ga0105249_10000388 3300009553 Bacteria 43495
51 Ga0105246_10014852 3300011119 Bacteria 4905
52 Ga0157370_10017627 3300013104 Bacteria 7200
53 Ga0157370_10023596 3300013104 Bacteria 6105
54 Ga0157369_10015855 3300013105 Bacteria 8486
55 Ga0157369_10048635 3300013105 Unclassified 4601
56 Ga0157369_10109944 3300013105 Bacteria 2930
57 Ga0157372_10005626 3300013307 Bacteria 13325
58 Ga0157372_10006325 3300013307 Bacteria 12599
59 Ga0157372_10011290 3300013307 Bacteria 9503
60 Ga0157372_10014802 3300013307 Bacteria 8352
61 Ga0157375_10007933 3300013308 Bacteria 9295
62 Ga0207645_10000514 3300025907 Bacteria 32127
63 Ga0207705_10001352 3300025909 Bacteria 19571
64 Ga0207695_10008217 3300025913 Bacteria 13108
65 Ga0207693_10052698 3300025915 Bacteria 3191
66 Ga0207660_10001547 3300025917 Bacteria 15405
67 Ga0207662_10001800 3300025918 Bacteria 10515
68 Ga0207657_10015029 3300025919 Bacteria 7517
69 Ga0207649_10020712 3300025920 Unclassified 3774
70 Ga0207681_10005717 3300025923 Bacteria 7630
71 Ga0207681_10018023 3300025923 Bacteria 4442
72 Ga0207659_10076957 3300025926 Bacteria 2454
73 Ga0207700_10001784 3300025928 Bacteria 12216
74 Ga0207690_10019637 3300025932 Unclassified 4164
75 Ga0207706_10001022 3300025933 Bacteria 28515
76 Ga0207691_10001158 3300025940 Bacteria 26181
77 Ga0207691_10013689 3300025940 Bacteria 7751
78 Ga0207689_10007604 3300025942 Bacteria 9492
79 Ga0207661_10011949 3300025944 Bacteria 6307
80 Ga0207679_10005706 3300025945 Bacteria 7808
81 Ga0207679_10009177 3300025945 Bacteria 6325
82 Ga0207667_10029615 3300025949 Bacteria 5936
83 Ga0207712_10000181 3300025961 Bacteria 65253
84 Ga0207668_10006245 3300025972 Bacteria 7037
85 Ga0207678_10014619 3300026067 Bacteria 6907
86 Ga0207648_10017661 3300026089 Bacteria 6480
87 Ga0207674_10003505 3300026116 Bacteria 19157
88 Ga0207674_10082665 3300026116 Bacteria 3212
89 Ga0207675_100000756 3300026118 Bacteria 32138
90 Ga0307408_100001854 3300031548 Bacteria 15408
91 Ga0307408_100004845 3300031548 Bacteria 9063
92 Ga0307408_100007335 3300031548 Bacteria 7296
93 Ga0265342_10021495 3300031712 Bacteria 4118
94 Ga0307405_10017356 3300031731 Bacteria 3947
95 Ga0307413_10021976 3300031824 Bacteria 3427
96 Ga0307406_10001515 3300031901 Bacteria 12820
97 Ga0307407_10000407 3300031903 Bacteria 13074
98 Ga0307412_10003662 3300031911 Bacteria 8538
99 Ga0307409_100000335 3300031995 Bacteria 19414
100 Ga0307416_100004466 3300032002 Bacteria 8437
101 Ga0307411_10000271 3300032005 Bacteria 17065
102 Ga0373934_0002798 3300035086 Bacteria 6394
103 Ga0373934_0013118 3300035086 Unclassified 3130
104 Ga0373956_0000342 3300035119 Bacteria 18800
105 Ga0373935_0009579 3300035692 Bacteria 5799
106 Ga0373927_0008552 3300035695 Bacteria 6882
107 Ga0373947_0000019 3300035725 Bacteria 101479
108 Ga0373937_0001300 3300036401 Bacteria 20910
109 Ga0373937_0083058 3300036401 Unclassified 2963
110 Ga0373925_0013085 3300037068 Bacteria 6006
111 Ga0436365_0909033 3300039437 Bacteria 4911
112 Ga0436365_1166186 3300039437 Bacteria 5296
113 Ga0495592_0000556 3300046454 Bacteria 26585
114 Ga0495651_0007138 3300046462 Bacteria 8541
115 Ga0495653_0001331 3300046463 Bacteria 19185
116 Ga0495653_0010088 3300046463 Bacteria 7727
117 Ga0495580_0016304 3300046472 Bacteria 5580
118 Ga0495580_0018038 3300046472 Bacteria 5262
119 Ga0495639_0000361 3300046475 Bacteria 21930
120 Ga0495594_0004748 3300046499 Bacteria 7001
121 Ga0495608_0000680 3300046511 Bacteria 23531
122 Ga0495628_0005967 3300046516 Bacteria 10664
123 Ga0495628_0012876 3300046516 Bacteria 7043
124 Ga0495652_0005227 3300046529 Bacteria 12261
125 Ga0495586_0016199 3300046535 Bacteria 3965
126 Ga0495587_0001002 3300046536 Bacteria 18581
127 Ga0495587_0002459 3300046536 Bacteria 12367
128 Ga0495645_0000351 3300046543 Bacteria 32660
129 Ga0495645_0000400 3300046543 Bacteria 29926
130 Ga0495667_0000716 3300046559 Bacteria 21267
131 Ga0495667_0021538 3300046559 Bacteria 4349
132 Ga0495588_0000549 3300046674 Bacteria 18036
133 Ga0495657_0000570 3300046675 Bacteria 33908
134 Ga0495599_0000762 3300046678 Bacteria 18135
135 Ga0495623_0000637 3300046679 Bacteria 23259
136 Ga0495658_0000854 3300046683 Bacteria 16384
137 Ga0495600_0000232 3300046809 Bacteria 30893
138 Ga0495581_0008810 3300047315 Bacteria 5839
139 Ga0495581_0032259 3300047315 Bacteria 3033
140 Ga0495604_0000429 3300047317 Bacteria 37816
141 Ga0495672_0003579 3300047320 Bacteria 13214
142 Ga0495675_0017321 3300047444 Unclassified 4565
143 Ga0495684_0000115 3300047471 Bacteria 58017
144 Ga0495593_0000460 3300047673 Bacteria 22852
145 Ga0495602_0052281 3300048088 Unclassified 3630
146 Ga0495614_0007851 3300048089 Bacteria 4743
147 Ga0496115_0061276 3300048918 Unclassified 3033
148 Ga0501033_0043107 3300049570 Bacteria 3361
149 Ga0501047_0001564 3300049581 Bacteria 22388
150 nmdc:mga0qj67_11980_c1 3300050509 Bacteria 6515
151 nmdc:mga0qj67_453_c1 3300050509 Bacteria 28026
152 nmdc:mga0qj67_54420_c1 3300050509 Bacteria 3169
153 nmdc:mga06r32_10784_c1 3300050510 Bacteria 8233
154 nmdc:mga08y16_19847_c1 3300050511 Bacteria 7088
155 nmdc:mga08y16_3828_c1 3300050511 Bacteria 15653
156 nmdc:mga0a205_18410_c1 3300050515 Bacteria 6567
157 nmdc:mga0a205_57707_c1 3300050515 Bacteria 3748
158 Ga0207693_10008234
159 Ga0070658_10006760
160 Ga0070658_10017702
161 Ga0070683_100011707
162 Ga0070683_100022920
163 Ga0070670_100017621
164 Ga0070680_100006728
165 Ga0070680_100007695
166 Ga0070689_100015132
167 Ga0070691_10001913
168 Ga0070661_100017454
169 Ga0070668_100019616
170 Ga0070669_100000283
171 Ga0070713_100001085
172 Ga0070713_100009334
173 Ga0070708_100000576
174 Ga0070681_10003780
175 Ga0070679_100001774
176 Ga0070679_100086949
177 Ga0070684_100014226
178 Ga0070684_100018858
179 Ga0070684_100055285
180 Ga0070693_100013106
181 Ga0068855_100023763
182 Ga0068855_100049262
183 Ga0070664_100015409
184 Ga0070664_100016467
185 Ga0068857_100074275
186 Ga0068863_100023099
187 Ga0068862_100000923
188 Ga0070717_10002822
189 Ga0070712_100032989
190 Ga0075428_100017336
191 Ga0075430_100005109
192 Ga0075430_100005726
193 Ga0075430_100011887
194 Ga0075431_100017464
195 Ga0075429_100024982
196 Ga0075436_100021697
197 Ga0105240_10004692
198 Ga0111539_10006498
199 Ga0111539_10013705
200 Ga0114129_10053577
201 Ga0114129_10077573
202 Ga0105248_10021530
203 Ga0105248_10080022
204 Ga0105237_10041763
205 Ga0105238_10065770
206 Ga0105249_10000089
207 Ga0105249_10000388
208 Ga0105246_10014852
209 Ga0157370_10017627
210 Ga0157370_10023596
211 Ga0157369_10015855
212 Ga0157369_10048635
213 Ga0157369_10109944
214 Ga0157372_10005626
215 Ga0157372_10006325
216 Ga0157372_10011290
217 Ga0157372_10014802
218 Ga0157375_10007933
219 Ga0207645_10000514
220 Ga0207705_10001352
221 Ga0207695_10008217
222 Ga0207693_10052698
223 Ga0207660_10001547
224 Ga0207662_10001800
225 Ga0207657_10015029
226 Ga0207649_10020712
227 Ga0207681_10005717
228 Ga0207681_10018023
229 Ga0207659_10076957
230 Ga0207700_10001784
231 Ga0207690_10019637
232 Ga0207706_10001022
233 Ga0207691_10001158
234 Ga0207691_10013689
235 Ga0207689_10007604
236 Ga0207661_10011949
237 Ga0207679_10005706
238 Ga0207679_10009177
239 Ga0207667_10029615
240 Ga0207712_10000181
241 Ga0207668_10006245
242 Ga0207678_10014619
243 Ga0207648_10017661
244 Ga0207674_10003505
245 Ga0207674_10082665
246 Ga0207675_100000756
247 Ga0307408_100001854
248 Ga0307408_100004845
249 Ga0307408_100007335
250 Ga0265342_10021495
251 Ga0307405_10017356
252 Ga0307413_10021976
253 Ga0307406_10001515
254 Ga0307407_10000407
255 Ga0307412_10003662
256 Ga0307409_100000335
257 Ga0307416_100004466
258 Ga0307411_10000271
259 Ga0373934_0002798
260 Ga0373934_0013118
261 Ga0373956_0000342
262 Ga0373935_0009579
263 Ga0373927_0008552
264 Ga0373947_0000019
265 Ga0373937_0001300
266 Ga0373937_0083058
267 Ga0373925_0013085
268 Ga0436365_0909033
269 Ga0436365_1166186
270 Ga0495592_0000556
271 Ga0495651_0007138
272 Ga0495653_0001331
273 Ga0495653_0010088
274 Ga0495580_0016304
275 Ga0495580_0018038
276 Ga0495639_0000361
277 Ga0495594_0004748
278 Ga0495608_0000680
279 Ga0495628_0005967
280 Ga0495628_0012876
281 Ga0495652_0005227
282 Ga0495586_0016199
283 Ga0495587_0001002
284 Ga0495587_0002459
285 Ga0495645_0000351
286 Ga0495645_0000400
287 Ga0495667_0000716
288 Ga0495667_0021538
289 Ga0495588_0000549
290 Ga0495657_0000570
291 Ga0495599_0000762
292 Ga0495623_0000637
293 Ga0495658_0000854
294 Ga0495600_0000232
295 Ga0495581_0008810
296 Ga0495581_0032259
297 Ga0495604_0000429
298 Ga0495672_0003579
299 Ga0495675_0017321
300 Ga0495684_0000115
301 Ga0495593_0000460
302 Ga0495602_0052281
303 Ga0495614_0007851
304 Ga0496115_0061276
305 Ga0501033_0043107
306 Ga0501047_0001564
307 nmdc:mga0qj67_11980_c1
308 nmdc:mga0qj67_453_c1
309 nmdc:mga0qj67_54420_c1
310 nmdc:mga06r32_10784_c1
311 nmdc:mga08y16_19847_c1
312 nmdc:mga08y16_3828_c1
313 nmdc:mga0a205_18410_c1
314 nmdc:mga0a205_57707_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07940

Hepar_II_III

Heparinase II/III-like protein

424

547

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bjt-assembly1.cif.gz_B structure-function analysis of a new pl17 oligoalginate lyase from the marine bacterium zobellia galactanivorans dsijt 0.7534 2 699
4nei-assembly1.cif.gz_B alg17c pl17 family alginate lyase 0.7508 2 699
4ok4-assembly1.cif.gz_B crystal structure of alg17c mutant h202l 0.7447 2 699
4nei-assembly1.cif.gz_B alg17c pl17 family alginate lyase 0.7418 2 699
4ok4-assembly1.cif.gz_B crystal structure of alg17c mutant h202l 0.7357 2 699
ID Description Score Start End Superfamily
4ok4B01 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase;Chondroitin AC/alginate lyase 0.8241 2 344 1.50.10.100
af_O17200_59_208_2.170.210.20 Mainly Beta;Beta Complex;Dna Repair Protein Xrcc4; Chain: A, domain 1;Spindle assembly abnormal protein 6, N-terminal domain 0.8101 655 697 2.170.210.20
4ok4B01 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase;Chondroitin AC/alginate lyase 0.7628 2 344 1.50.10.100
4ok4B02 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5; 0.7351 407 699 2.70.98.70
5jmfA02 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5; 0.7186 397 694 2.70.98.70
ID Description Score Start End GO Terms
AF-A0A7Y5PF03-F1-model_v4 Alginate lyase domain-containing protein 0.9869 1 410
AF-A0A7Y5PF03-F1-model_v4 Alginate lyase domain-containing protein 0.9821 1 410
AF-A0A2V7SML3-F1-model_v4 Heparinase II/III-like C-terminal domain-containing protein 0.9732 1 907 GO:0016829
GO:0042597
AF-A0A7Y5TS57-F1-model_v4 Alginate lyase domain-containing protein 0.9715 1 352
AF-A0A838NVI6-F1-model_v4 Heparinase 0.9679 1 192

Map