F219124

General Info

Members Datasets Scaffolds Average Seq Length
154 94 308 270

Family's Representative Sequence

Representative Sequence 3300005546|Ga0070696_100010646|Ga0070696_1000106466
Length 283
Sequence LLYYSYPMANILSADKQIAVIGALAEGSSIRSIERITGVHRDTIMRLGVRVGEGCAKLMDRKMRDLPCQRLQLDEIWGFIGKKQRHVRPTDDPQMGDVWTFCAIDADTKLVPAFKVGKRDSETANAFVGDLAGRMRNRVQISTDGLAAYVGAIDDAFGIAVDYAQVIKTYTQDESKHPERKYSAPRITTSEKHVVMGHPDMSQASTSYVERLNATTRLHMRRLTRLTLAFSKKRENFEAAVALHFAYYNLVKRHSTLRVTPAMEAGVERSFWTVADLVEAATA

Samples

Sample ID Description Type Environment
1 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
51 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
73 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
75 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
76 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
77 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
78 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
79 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
80 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
81 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
82 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
83 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
84 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
85 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
86 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
87 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
88 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
89 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
90 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
91 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
92 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
93 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
94 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.35
Metatranscriptomes 0.65
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.65
Rhizosphere 97.4
Stem 0
Stem Tuber 0
Unclassified 20.13

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070696_100010646 3300005546 Bacteria 6160
2 JGI25406J46586_10008616 3300003203 Unclassified 4607
3 Ga0065714_10064426 3300005288 Bacteria 186606
4 Ga0065712_10067732 3300005290 Bacteria 130748
5 Ga0065715_10089586 3300005293 Bacteria 9362
6 Ga0070682_100233023 3300005337 Bacteria 1317
7 Ga0070660_100122259 3300005339 Bacteria 2078
8 Ga0070689_100000044 3300005340 Bacteria 76920
9 Ga0070689_100002415 3300005340 Bacteria 12211
10 Ga0070692_10015424 3300005345 Bacteria 3615
11 Ga0070671_100048127 3300005355 Bacteria 3545
12 Ga0070671_100055969 3300005355 Unclassified 3282
13 Ga0070671_100062297 3300005355 Bacteria 3106
14 Ga0070673_100132397 3300005364 Bacteria 2094
15 Ga0070659_100187318 3300005366 Bacteria 1700
16 Ga0070701_10148284 3300005438 Unclassified 1348
17 Ga0070705_100065816 3300005440 Unclassified 2171
18 Ga0070700_100000266 3300005441 Bacteria 27903
19 Ga0070694_100000030 3300005444 Bacteria 65305
20 Ga0070694_100004714 3300005444 Bacteria 8213
21 Ga0070694_100084300 3300005444 Bacteria 2217
22 Ga0070708_100044456 3300005445 Unclassified 3906
23 Ga0070708_100060004 3300005445 Bacteria 3393
24 Ga0070708_100253852 3300005445 Unclassified 1652
25 Ga0070706_100141445 3300005467 Unclassified 2246
26 Ga0070706_100290522 3300005467 Bacteria 1525
27 Ga0070707_100009215 3300005468 Bacteria 9160
28 Ga0070707_100036246 3300005468 Unclassified 4706
29 Ga0070707_100067024 3300005468 Bacteria 3452
30 Ga0070698_100002075 3300005471 Bacteria 22276
31 Ga0070699_100000015 3300005518 Bacteria 211169
32 Ga0070699_100028724 3300005518 Unclassified 4796
33 Ga0070699_100170515 3300005518 Bacteria 1928
34 Ga0070699_100242565 3300005518 Bacteria 1609
35 Ga0068853_100024607 3300005539 Bacteria 5050
36 Ga0068853_100259564 3300005539 Bacteria 1597
37 Ga0070686_100007156 3300005544 Bacteria 6218
38 Ga0070686_100076759 3300005544 Unclassified 2201
39 Ga0070686_100458572 3300005544 Unclassified 981
40 Ga0070696_100000174 3300005546 Bacteria 36905
41 Ga0070696_100667779 3300005546 Bacteria 844
42 Ga0070704_100002175 3300005549 Bacteria 10915
43 Ga0070704_100031157 3300005549 Viruses 3583
44 Ga0070704_100166288 3300005549 Bacteria 1749
45 Ga0070702_100106730 3300005615 Unclassified 1728
46 Ga0068859_100005889 3300005617 Bacteria 12442
47 Ga0068859_100066172 3300005617 Bacteria 3649
48 Ga0068859_100112339 3300005617 Unclassified 2788
49 Ga0068859_100161067 3300005617 Bacteria 2323
50 Ga0068863_100039748 3300005841 Unclassified 4474
51 Ga0068863_100165735 3300005841 Unclassified 2119
52 Ga0068863_100889681 3300005841 Unclassified 890
53 Ga0068858_100159507 3300005842 Bacteria 2124
54 Ga0068860_100025268 3300005843 Bacteria 5732
55 Ga0068860_100290692 3300005843 Unclassified 1599
56 Ga0081539_10000697 3300005985 Bacteria 67380
57 Ga0070716_100000003 3300006173 Bacteria 312721
58 Ga0097621_100008682 3300006237 Bacteria 7336
59 Ga0097621_100189553 3300006237 Unclassified 1780
60 Ga0068871_100002807 3300006358 Bacteria 11915
61 Ga0068871_100032391 3300006358 Bacteria 4129
62 Ga0075436_100028721 3300006914 Bacteria 3825
63 Ga0075436_100029087 3300006914 Bacteria 3800
64 Ga0097620_100005889 3300006931 Bacteria 12442
65 Ga0097620_100066170 3300006931 Bacteria 3649
66 Ga0097620_100112340 3300006931 Unclassified 2788
67 Ga0097620_100161064 3300006931 Bacteria 2323
68 Ga0075435_100002555 3300007076 Bacteria 12128
69 Ga0075435_100025239 3300007076 Bacteria 4624
70 Ga0105240_10137617 3300009093 Bacteria 2923
71 Ga0111539_10009488 3300009094 Bacteria 12280
72 Ga0105243_10011927 3300009148 Bacteria 6572
73 Ga0105241_10013647 3300009174 Bacteria 5953
74 Ga0105242_10142918 3300009176 Unclassified 2079
75 Ga0105248_10019406 3300009177 Bacteria 7522
76 Ga0105248_10099219 3300009177 Unclassified 3281
77 Ga0105248_10577197 3300009177 Bacteria 1269
78 Ga0105248_10906606 3300009177 Unclassified 995
79 Ga0105249_10000092 3300009553 Bacteria 125188
80 Ga0105249_10088399 3300009553 Unclassified 2894
81 Ga0105249_10346221 3300009553 Bacteria 1504
82 Ga0105239_10131280 3300010375 Unclassified 2786
83 Ga0157369_10038871 3300013105 Bacteria 5201
84 Ga0157378_10014158 3300013297 Bacteria 6980
85 Ga0157378_10016995 3300013297 Bacteria 6378
86 Ga0157378_10023839 3300013297 Bacteria 5383
87 Ga0163162_10000002 3300013306 Bacteria 717331
88 Ga0163162_10006057 3300013306 Bacteria 11706
89 Ga0163162_10029051 3300013306 Bacteria 5472
90 Ga0163162_10072918 3300013306 Bacteria 3488
91 Ga0163162_10371165 3300013306 Bacteria 1564
92 Ga0163162_10880042 3300013306 Bacteria 1010
93 Ga0157375_10037223 3300013308 Unclassified 4660
94 Ga0157375_10038278 3300013308 Bacteria 4605
95 Ga0157375_10041684 3300013308 Bacteria 4435
96 Ga0157375_11044446 3300013308 Unclassified 955
97 Ga0157380_10010585 3300014326 Bacteria 6635
98 Ga0157380_10016940 3300014326 Bacteria 5383
99 Ga0213875_10000018 3300021388 Bacteria 233445
100 Ga0207647_10035976 3300025904 Bacteria 3149
101 Ga0207684_10116535 3300025910 Unclassified 2289
102 Ga0207654_10004438 3300025911 Bacteria 7079
103 Ga0207695_10026791 3300025913 Bacteria 6428
104 Ga0207693_10197918 3300025915 Unclassified 1580
105 Ga0207646_10069832 3300025922 Bacteria 3138
106 Ga0207646_10108079 3300025922 Bacteria 2495
107 Ga0207644_10000150 3300025931 Bacteria 50157
108 Ga0207644_10034221 3300025931 Bacteria 3554
109 Ga0207690_10389590 3300025932 Bacteria 1109
110 Ga0207686_10010979 3300025934 Bacteria 4942
111 Ga0207709_10154437 3300025935 Bacteria 1593
112 Ga0207670_10000321 3300025936 Bacteria 28665
113 Ga0207665_10000003 3300025939 Bacteria 220666
114 Ga0207711_10007423 3300025941 Bacteria 9175
115 Ga0207711_10008639 3300025941 Bacteria 8517
116 Ga0207689_10137941 3300025942 Unclassified 2008
117 Ga0207651_10215679 3300025960 Bacteria 1548
118 Ga0207712_10000135 3300025961 Bacteria 77342
119 Ga0207712_10005542 3300025961 Bacteria 7964
120 Ga0207703_10154705 3300026035 Bacteria 2003
121 Ga0207639_10000553 3300026041 Bacteria 25703
122 Ga0207708_10000725 3300026075 Bacteria 24762
123 Ga0207708_10004585 3300026075 Bacteria 10174
124 Ga0207641_10011847 3300026088 Bacteria 7156
125 Ga0207674_10575695 3300026116 Bacteria 1088
126 Ga0207428_10034899 3300027907 Bacteria 4116
127 Ga0268264_10148509 3300028381 Bacteria 2099
128 Ga0268264_10194304 3300028381 Bacteria 1852
129 Ga0268264_10258859 3300028381 Unclassified 1620
130 Ga0265319_1000221 3300028563 Bacteria 42487
131 Ga0265334_10081617 3300028573 Bacteria 1190
132 Ga0265318_10000246 3300028577 Bacteria 47255
133 Ga0265338_10186831 3300028800 Bacteria 1574
134 Ga0265760_10000004 3300031090 Bacteria 149429
135 Ga0265332_10016343 3300031238 Bacteria 3275
136 Ga0265325_10013260 3300031241 Bacteria 4697
137 Ga0265325_10077992 3300031241 Bacteria 1651
138 Ga0265329_10000475 3300031242 Bacteria 20908
139 Ga0265339_10009298 3300031249 Bacteria 6190
140 Ga0265331_10000266 3300031250 Bacteria 58865
141 Ga0265316_10000810 3300031344 Bacteria 34571
142 Ga0265313_10004002 3300031595 Bacteria 11534
143 Ga0265314_10018698 3300031711 Bacteria 5394
144 Ga0265342_10000322 3300031712 Bacteria 53898
145 Ga0436364_0158068 3300037853 Bacteria 183638
146 Ga0436363_1312974 3300039450 Bacteria 3381
147 Ga0453683_0068833 3300044673 Bacteria 2213
148 Ga0496110_0736049 3300048913 Unclassified 889
149 nmdc:mga08y16_51744_c2 3300050511 Bacteria 3322
150 nmdc:mga08y16_6432_c1 3300050511 Bacteria 12316
151 nmdc:mga0rr50_23508_c1 3300050513 Bacteria 4251
152 nmdc:mga0rr50_26335_c1 3300050513 Bacteria 4055
153 nmdc:mga08x19_1860_c1 3300050514 Bacteria 12924
154 nmdc:mga08x19_27057_c1 3300050514 Bacteria 3585
155 Ga0070696_100010646
156 JGI25406J46586_10008616
157 Ga0065714_10064426
158 Ga0065712_10067732
159 Ga0065715_10089586
160 Ga0070682_100233023
161 Ga0070660_100122259
162 Ga0070689_100000044
163 Ga0070689_100002415
164 Ga0070692_10015424
165 Ga0070671_100048127
166 Ga0070671_100055969
167 Ga0070671_100062297
168 Ga0070673_100132397
169 Ga0070659_100187318
170 Ga0070701_10148284
171 Ga0070705_100065816
172 Ga0070700_100000266
173 Ga0070694_100000030
174 Ga0070694_100004714
175 Ga0070694_100084300
176 Ga0070708_100044456
177 Ga0070708_100060004
178 Ga0070708_100253852
179 Ga0070706_100141445
180 Ga0070706_100290522
181 Ga0070707_100009215
182 Ga0070707_100036246
183 Ga0070707_100067024
184 Ga0070698_100002075
185 Ga0070699_100000015
186 Ga0070699_100028724
187 Ga0070699_100170515
188 Ga0070699_100242565
189 Ga0068853_100024607
190 Ga0068853_100259564
191 Ga0070686_100007156
192 Ga0070686_100076759
193 Ga0070686_100458572
194 Ga0070696_100000174
195 Ga0070696_100667779
196 Ga0070704_100002175
197 Ga0070704_100031157
198 Ga0070704_100166288
199 Ga0070702_100106730
200 Ga0068859_100005889
201 Ga0068859_100066172
202 Ga0068859_100112339
203 Ga0068859_100161067
204 Ga0068863_100039748
205 Ga0068863_100165735
206 Ga0068863_100889681
207 Ga0068858_100159507
208 Ga0068860_100025268
209 Ga0068860_100290692
210 Ga0081539_10000697
211 Ga0070716_100000003
212 Ga0097621_100008682
213 Ga0097621_100189553
214 Ga0068871_100002807
215 Ga0068871_100032391
216 Ga0075436_100028721
217 Ga0075436_100029087
218 Ga0097620_100005889
219 Ga0097620_100066170
220 Ga0097620_100112340
221 Ga0097620_100161064
222 Ga0075435_100002555
223 Ga0075435_100025239
224 Ga0105240_10137617
225 Ga0111539_10009488
226 Ga0105243_10011927
227 Ga0105241_10013647
228 Ga0105242_10142918
229 Ga0105248_10019406
230 Ga0105248_10099219
231 Ga0105248_10577197
232 Ga0105248_10906606
233 Ga0105249_10000092
234 Ga0105249_10088399
235 Ga0105249_10346221
236 Ga0105239_10131280
237 Ga0157369_10038871
238 Ga0157378_10014158
239 Ga0157378_10016995
240 Ga0157378_10023839
241 Ga0163162_10000002
242 Ga0163162_10006057
243 Ga0163162_10029051
244 Ga0163162_10072918
245 Ga0163162_10371165
246 Ga0163162_10880042
247 Ga0157375_10037223
248 Ga0157375_10038278
249 Ga0157375_10041684
250 Ga0157375_11044446
251 Ga0157380_10010585
252 Ga0157380_10016940
253 Ga0213875_10000018
254 Ga0207647_10035976
255 Ga0207684_10116535
256 Ga0207654_10004438
257 Ga0207695_10026791
258 Ga0207693_10197918
259 Ga0207646_10069832
260 Ga0207646_10108079
261 Ga0207644_10000150
262 Ga0207644_10034221
263 Ga0207690_10389590
264 Ga0207686_10010979
265 Ga0207709_10154437
266 Ga0207670_10000321
267 Ga0207665_10000003
268 Ga0207711_10007423
269 Ga0207711_10008639
270 Ga0207689_10137941
271 Ga0207651_10215679
272 Ga0207712_10000135
273 Ga0207712_10005542
274 Ga0207703_10154705
275 Ga0207639_10000553
276 Ga0207708_10000725
277 Ga0207708_10004585
278 Ga0207641_10011847
279 Ga0207674_10575695
280 Ga0207428_10034899
281 Ga0268264_10148509
282 Ga0268264_10194304
283 Ga0268264_10258859
284 Ga0265319_1000221
285 Ga0265334_10081617
286 Ga0265318_10000246
287 Ga0265338_10186831
288 Ga0265760_10000004
289 Ga0265332_10016343
290 Ga0265325_10013260
291 Ga0265325_10077992
292 Ga0265329_10000475
293 Ga0265339_10009298
294 Ga0265331_10000266
295 Ga0265316_10000810
296 Ga0265313_10004002
297 Ga0265314_10018698
298 Ga0265342_10000322
299 Ga0436364_0158068
300 Ga0436363_1312974
301 Ga0453683_0068833
302 Ga0496110_0736049
303 nmdc:mga08y16_51744_c2
304 nmdc:mga08y16_6432_c1
305 nmdc:mga0rr50_23508_c1
306 nmdc:mga0rr50_26335_c1
307 nmdc:mga08x19_1860_c1
308 nmdc:mga08x19_27057_c1

MSA Aligner

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Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
2lvs-assembly1.cif.gz_A nmr solution structure of a crispr repeat binding protein 0.8506 5 40
7dwm-assembly1.cif.gz_B crystal structure of the phage vqma-dpo complex 0.8165 8 44
7x1k-assembly1.cif.gz_B crystal structure of the flagellar expression regulator degu from listeria monocytogenes 0.8036 8 40
6ugl-assembly1.cif.gz_A vqma bound to dpo 0.8036 5 44
7ve5-assembly1.cif.gz_B c-terminal domain of vrar 0.7985 8 44
ID Description Score Start End Superfamily
af_Q21972_79_144_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9353 2 40 1.10.10.10
af_P23758_5_73_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9283 2 40 1.10.10.10
af_Q20551_91_164_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9214 2 37 1.10.10.10
af_P24610_34_102_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.912 2 37 1.10.10.10
af_Q60323_71_203_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8817 55 148 3.30.420.10
ID Description Score Start End GO Terms
AF-A0A2V8KD56-F1-model_v4 IS1 family transposase 0.9734 3 128
AF-A0A2V9PXI6-F1-model_v4 IS1 family transposase 0.9702 18 153
AF-A0A2V9Q592-F1-model_v4 IS1 family transposase 0.9662 3 130
AF-A0A2V9FNM9-F1-model_v4 IS1 family transposase 0.9652 3 151
AF-A0A536TEE3-F1-model_v4 Uncharacterized protein 0.9626 32 155

Map