F215402

General Info

Members Datasets Scaffolds Average Seq Length
152 121 142 178

Family's Representative Sequence

Representative Sequence 3300048927|Ga0496124_0008876|Ga0496124_0008876_8244_8882
Length 206
Sequence LTVTRTRETVELTRLGDTVTVKAAASLAMRRKGDMRRTILIYGLISGAIIILGMISTIVLSAQHSLWLGYLIMLVGLSAILLAVKSHRDRTLGGVIKFWPAFLIGLGVALVAGFTYMAIWEGYLAITHYRFMDDYTASILASKRAEGLSGVAYDKLVAEMTRMKADYANPLYRMPMTFTEIFPIGALVALVSAALLRNPRFLPARV

Samples

Sample ID Description Type Environment
1 2643221583 Caulobacter sp. Root655 Isolate Unclassified
2 2643221585 Pelomonas sp. Root662 Isolate Unclassified
3 2643221640 Caulobacter sp. Root342 Isolate Unclassified
4 2643221642 Caulobacter sp. Root343 Isolate Unclassified
5 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
6 2643221656 Pelomonas sp. Root405 Isolate Unclassified
7 2738541337 Pelomonas sp. BT06 Isolate Unclassified
8 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
9 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
10 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
11 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
12 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
13 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
14 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
15 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
16 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
17 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
18 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
19 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
20 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
21 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
22 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
23 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
24 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
25 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
26 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
27 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
28 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
29 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
30 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
31 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
32 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
33 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
54 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
71 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
72 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
73 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
74 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
75 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
76 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
77 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
78 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
79 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
80 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
81 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
82 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
83 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
84 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
85 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
86 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
87 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
88 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
89 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
90 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
91 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
92 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
93 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
94 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
95 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
96 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
97 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
98 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
99 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
100 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
101 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
102 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
103 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
104 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
105 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
106 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
107 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
108 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
109 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
115 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
116 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
117 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
118 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
119 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
120 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
121 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.42
Metatranscriptomes 0
Isolates 6.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 26.32
Nodule 0
Rhizoplane 2.63
Rhizosphere 53.95
Stem 0
Stem Tuber 0
Unclassified 17.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10070292 3300003215 Bacteria 909
2 rootH2_10108682 3300003320 Bacteria 1196
3 rootL2_10021379 3300003322 Bacteria 5934
4 rootH1_10029694 3300003323 Bacteria 9656
5 Ga0055536_1053788 3300003781 Bacteria 869
6 Ga0055530_10005067 3300003791 Bacteria 6469
7 Ga0055530_10024223 3300003791 Bacteria 1727
8 Ga0055530_10025410 3300003791 Bacteria 1655
9 Ga0055530_10036893 3300003791 Bacteria 1227
10 Ga0055540_1001742 3300003792 Bacteria 12478
11 Ga0055531_10000042 3300003794 Bacteria 134368
12 Ga0055531_10002796 3300003794 Bacteria 11443
13 Ga0055531_10005073 3300003794 Bacteria 7786
14 Ga0055531_10033726 3300003794 Bacteria 1641
15 Ga0065165_1000523 3300005262 Bacteria 58644
16 Ga0065165_1024087 3300005262 Bacteria 2052
17 Ga0070670_100761955 3300005331 Bacteria 873
18 Ga0070670_101135125 3300005331 Bacteria 713
19 Ga0068869_101310033 3300005334 Bacteria 639
20 Ga0070666_10117382 3300005335 Bacteria 1843
21 Ga0070682_100001418 3300005337 Bacteria 13492
22 Ga0070668_100622696 3300005347 Bacteria 946
23 Ga0070675_100049177 3300005354 Bacteria 3460
24 Ga0070688_100239788 3300005365 Bacteria 1286
25 Ga0070667_100000108 3300005367 Bacteria 105301
26 Ga0070714_100321975 3300005435 Bacteria 1446
27 Ga0070663_100000070 3300005455 Bacteria 44357
28 Ga0070663_100559225 3300005455 Bacteria 957
29 Ga0070662_101214332 3300005457 Bacteria 648
30 Ga0070685_10006643 3300005466 Bacteria 5905
31 Ga0070679_100035326 3300005530 Bacteria 4958
32 Ga0068853_100001790 3300005539 Bacteria 15794
33 Ga0068857_100246174 3300005577 Bacteria 1638
34 Ga0068852_100090250 3300005616 Bacteria 2740
35 Ga0068852_100278147 3300005616 Bacteria 1613
36 Ga0068863_100081943 3300005841 Bacteria 3057
37 Ga0068858_100329923 3300005842 Bacteria 1459
38 Ga0068860_100043720 3300005843 Bacteria 4272
39 Ga0068862_100081920 3300005844 Bacteria 2800
40 Ga0075369_10004632 3300006186 Bacteria 5100
41 Ga0075366_10022382 3300006195 Bacteria 3676
42 Ga0105240_10010308 3300009093 Bacteria 13156
43 Ga0105240_10156632 3300009093 Bacteria 2708
44 Ga0105245_11730722 3300009098 Bacteria 678
45 Ga0105248_10000629 3300009177 Bacteria 40027
46 Ga0105237_10006176 3300009545 Bacteria 13383
47 Ga0105237_10034064 3300009545 Bacteria 5158
48 Ga0105238_10006865 3300009551 Bacteria 11367
49 Ga0105249_10000426 3300009553 Bacteria 40153
50 Ga0105239_12186151 3300010375 Bacteria 643
51 Ga0163163_11193494 3300014325 Bacteria 824
52 Ga0209565_1000166 3300025263 Bacteria 85898
53 Ga0209676_1017303 3300025292 Bacteria 2558
54 Ga0209564_1001084 3300025295 Bacteria 32523
55 Ga0209758_1000933 3300025297 Bacteria 39569
56 Ga0209758_1025464 3300025297 Bacteria 2595
57 Ga0209050_1000001 3300025298 Bacteria 3563507
58 Ga0209050_1000419 3300025298 Bacteria 78444
59 Ga0209050_1006228 3300025298 Bacteria 7149
60 Ga0209050_1010073 3300025298 Bacteria 4717
61 Ga0209256_1012797 3300025299 Bacteria 3173
62 Ga0209256_1037697 3300025299 Bacteria 1257
63 Ga0209051_1000309 3300025303 Bacteria 76449
64 Ga0209051_1003165 3300025303 Bacteria 11032
65 Ga0209257_1000016 3300025304 Bacteria 908015
66 Ga0209257_1000308 3300025304 Bacteria 105012
67 Ga0209257_1000441 3300025304 Bacteria 78385
68 Ga0209257_1006349 3300025304 Bacteria 7679
69 Ga0209257_1023200 3300025304 Bacteria 2188
70 Ga0207680_10219483 3300025903 Bacteria 1303
71 Ga0207695_10000007 3300025913 Bacteria 1092551
72 Ga0207695_10117495 3300025913 Bacteria 2632
73 Ga0207671_10029047 3300025914 Bacteria 4131
74 Ga0207671_10046468 3300025914 Bacteria 3212
75 Ga0207694_10000361 3300025924 Bacteria 42849
76 Ga0207669_10488327 3300025937 Bacteria 983
77 Ga0207689_10592212 3300025942 Bacteria 933
78 Ga0207712_10000363 3300025961 Bacteria 40122
79 Ga0207658_10000093 3300025986 Bacteria 98928
80 Ga0207703_10505081 3300026035 Bacteria 1135
81 Ga0207639_10006670 3300026041 Bacteria 7852
82 Ga0207678_10003189 3300026067 Bacteria 14837
83 Ga0207698_10034275 3300026142 Bacteria 3698
84 Ga0207698_10144686 3300026142 Bacteria 2054
85 Ga0265318_10000404 3300028577 Bacteria 33512
86 Ga0307515_10017996 3300028794 Bacteria 12827
87 Ga0265316_10260138 3300031344 Unclassified 1273
88 Ga0307408_100255656 3300031548 Bacteria 1447
89 Ga0307406_11150879 3300031901 Bacteria 672
90 Ga0307412_10320954 3300031911 Bacteria 1232
91 Ga0307416_101577414 3300032002 Bacteria 762
92 Ga0307411_10511965 3300032005 Bacteria 1017
93 Ga0373937_0101392 3300036401 Unclassified 2672
94 Ga0395900_0382436 3300037418 Bacteria 1375
95 Ga0395905_0216672 3300037471 Bacteria 1793
96 Ga0436360_1084607 3300039438 Bacteria 1438
97 Ga0451797_0312404 3300041453 Bacteria 1957
98 Ga0451807_0318272 3300041486 Bacteria 4050
99 Ga0451835_0671060 3300041492 Bacteria 749
100 Ga0451837_1221342 3300041494 Bacteria 9324
101 Ga0451843_0038501 3300041509 Bacteria 1037
102 Ga0451853_1746850 3300041512 Bacteria 2409
103 Ga0439455_0149530 3300042012 Bacteria 664
104 Ga0453683_0121596 3300044673 Bacteria 1644
105 Ga0466967_0283177 3300045976 Bacteria 1591
106 Ga0495627_002244 3300046453 Bacteria 9569
107 Ga0495638_0064158 3300046460 Bacteria 2263
108 Ga0495606_0096957 3300046507 Bacteria 1803
109 Ga0495648_0000075 3300046524 Bacteria 129579
110 Ga0495597_0073384 3300046542 Bacteria 1471
111 Ga0495668_0000042 3300046616 Bacteria 229361
112 Ga0495668_0123666 3300046616 Bacteria 1415
113 Ga0495625_0008285 3300046660 Bacteria 8884
114 Ga0495625_0138845 3300046660 Bacteria 1641
115 Ga0495625_0345585 3300046660 Bacteria 941
116 Ga0495671_0073374 3300046692 Bacteria 1680
117 Ga0495673_0000225 3300047469 Bacteria 83589
118 Ga0496103_0105934 3300048906 Bacteria 1783
119 Ga0496107_0718916 3300048910 Bacteria 734
120 Ga0496117_0025418 3300048920 Bacteria 4658
121 Ga0496117_0089826 3300048920 Bacteria 1982
122 Ga0496118_0000582 3300048921 Bacteria 60390
123 Ga0496121_0701984 3300048924 Bacteria 609
124 Ga0496122_0001038 3300048925 Bacteria 48750
125 Ga0496123_0000848 3300048926 Bacteria 48801
126 Ga0496124_0008876 3300048927 Bacteria 10433
127 Ga0496126_0051281 3300048929 Bacteria 3757
128 Ga0496126_0063926 3300048929 Bacteria 3297
129 Ga0496126_0143245 3300048929 Bacteria 2055
130 Ga0501032_0023190 3300049569 Bacteria 4294
131 Ga0501043_0109962 3300049579 Bacteria 2164
132 Ga0501046_0105911 3300049580 Bacteria 2153
133 Ga0501047_0001071 3300049581 Bacteria 27278
134 Ga0501035_0007849 3300049822 Bacteria 9975
135 Ga0501044_0293702 3300049823 Bacteria 1556
136 nmdc:mga0sz30_2758_c1 3300050516 Bacteria 6266
137 Ga0500610_0012448 3300053079 Bacteria 3919
138 Ga0500608_000031 3300053122 Bacteria 65736
139 Ga0500559_0008719 3300053136 Bacteria 4426
140 Ga0500577_0014764 3300053142 Bacteria 2423
141 Ga0500588_0217769 3300053146 Bacteria 711
142 Ga0500622_0095685 3300053156 Bacteria 1468

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005262 Ga0065165_1000523 Ga0065165_100052313 168
2 3300045976 Ga0466967_0283177 Ga0466967_0283177_359_910 168
3 iso_pu_bacteria 2643221640 2644227305 168
4 iso_pu_bacteria 2643221642 2644233227 168
5 iso_pu_bacteria 2857504554 2857504970 168
6 iso_pu_bacteria 2928531327 2928534239 168
7 3300049822 Ga0501035_0007849 Ga0501035_0007849_3450_3989 169
8 3300048906 Ga0496103_0105934 Ga0496103_0105934_1189_1710 170
9 iso_pu_bacteria 2738541337 2739054685 170
10 3300003791 Ga0055530_10036893 Ga0055530_100368931 171
11 3300005262 Ga0065165_1024087 Ga0065165_10240871 171
12 3300025295 Ga0209564_1001084 Ga0209564_100108425 171
13 3300025297 Ga0209758_1025464 Ga0209758_10254642 171
14 3300025298 Ga0209050_1010073 Ga0209050_10100732 171
15 3300037418 Ga0395900_0382436 Ga0395900_0382436_654_1184 171
16 3300048910 Ga0496107_0718916 Ga0496107_0718916_176_700 171
17 iso_pu_bacteria 2643221583 2643926510 171
18 iso_pu_bacteria 2643221585 2643932382 171
19 iso_pu_bacteria 2643221646 2644256256 171
20 iso_pu_bacteria 2643221656 2644313633 171
21 iso_pu_bacteria 2884960567 2884962708 171
22 3300003781 Ga0055536_1053788 Ga0055536_10537881 172
23 3300003791 Ga0055530_10025410 Ga0055530_100254102 172
24 3300003792 Ga0055540_1001742 Ga0055540_10017426 172
25 3300003794 Ga0055531_10033726 Ga0055531_100337262 172
26 3300006186 Ga0075369_10004632 Ga0075369_100046322 172
27 3300006195 Ga0075366_10022382 Ga0075366_100223822 172
28 3300009098 Ga0105245_11730722 Ga0105245_117307221 172
29 3300014325 Ga0163163_11193494 Ga0163163_111934942 172
30 3300025263 Ga0209565_1000166 Ga0209565_100016665 172
31 3300025292 Ga0209676_1017303 Ga0209676_10173032 172
32 3300025298 Ga0209050_1000001 Ga0209050_10000011300 172
33 3300025299 Ga0209256_1012797 Ga0209256_10127972 172
34 3300025303 Ga0209051_1000309 Ga0209051_100030911 172
35 3300025304 Ga0209257_1006349 Ga0209257_10063497 172
36 3300041492 Ga0451835_0671060 Ga0451835_0671060_40_558 172
37 3300046460 Ga0495638_0064158 Ga0495638_0064158_294_812 172
38 3300046507 Ga0495606_0096957 Ga0495606_0096957_1154_1672 172
39 3300046542 Ga0495597_0073384 Ga0495597_0073384_595_1113 172
40 3300046616 Ga0495668_0123666 Ga0495668_0123666_281_799 172
41 3300046660 Ga0495625_0345585 Ga0495625_0345585_43_561 172
42 3300048924 Ga0496121_0701984 Ga0496121_0701984_31_549 172
43 3300048927 Ga0496124_0008876 Ga0496124_0008876_8244_8882 172
44 3300048929 Ga0496126_0051281 Ga0496126_0051281_2134_2772 172
45 3300048929 Ga0496126_0063926 Ga0496126_0063926_2085_2603 172
46 3300050516 nmdc:mga0sz30_2758_c1 nmdc:mga0sz30_2758_c1_981_1619 172
47 3300053122 Ga0500608_000031 Ga0500608_000031_26163_26681 172
48 3300053136 Ga0500559_0008719 Ga0500559_0008719_2310_2828 172
49 3300053156 Ga0500622_0095685 Ga0500622_0095685_50_568 172
50 3300003794 Ga0055531_10005073 Ga0055531_100050733 173
51 3300025304 Ga0209257_1000308 Ga0209257_1000308106 173
52 3300041453 Ga0451797_0312404 Ga0451797_0312404_1070_1597 173
53 3300041486 Ga0451807_0318272 Ga0451807_0318272_3116_3643 173
54 3300041494 Ga0451837_1221342 Ga0451837_1221342_1861_2388 173
55 3300041509 Ga0451843_0038501 Ga0451843_0038501_212_739 173
56 3300025304 Ga0209257_1023200 Ga0209257_10232002 174
57 3300028577 Ga0265318_10000404 Ga0265318_1000040424 174
58 3300037471 Ga0395905_0216672 Ga0395905_0216672_1168_1692 174
59 3300048920 Ga0496117_0025418 Ga0496117_0025418_2180_2713 174
60 3300048921 Ga0496118_0000582 Ga0496118_0000582_53449_53982 174
61 3300003322 rootL2_10021379 rootL2_100213798 175
62 3300003323 rootH1_10029694 rootH1_100296949 175
63 3300003791 Ga0055530_10024223 Ga0055530_100242233 175
64 3300003794 Ga0055531_10000042 Ga0055531_1000004240 175
65 3300005331 Ga0070670_100761955 Ga0070670_1007619551 175
66 3300005335 Ga0070666_10117382 Ga0070666_101173823 175
67 3300005337 Ga0070682_100001418 Ga0070682_1000014185 175
68 3300005365 Ga0070688_100239788 Ga0070688_1002397881 175
69 3300005367 Ga0070667_100000108 Ga0070667_10000010827 175
70 3300005435 Ga0070714_100321975 Ga0070714_1003219752 175
71 3300005455 Ga0070663_100000070 Ga0070663_1000000703 175
72 3300005455 Ga0070663_100559225 Ga0070663_1005592252 175
73 3300005466 Ga0070685_10006643 Ga0070685_100066432 175
74 3300005539 Ga0068853_100001790 Ga0068853_1000017909 175
75 3300005577 Ga0068857_100246174 Ga0068857_1002461742 175
76 3300005616 Ga0068852_100090250 Ga0068852_1000902503 175
77 3300005616 Ga0068852_100278147 Ga0068852_1002781472 175
78 3300005841 Ga0068863_100081943 Ga0068863_1000819434 175
79 3300005842 Ga0068858_100329923 Ga0068858_1003299231 175
80 3300005843 Ga0068860_100043720 Ga0068860_1000437205 175
81 3300005844 Ga0068862_100081920 Ga0068862_1000819203 175
82 3300009093 Ga0105240_10010308 Ga0105240_100103083 175
83 3300009093 Ga0105240_10156632 Ga0105240_101566323 175
84 3300009177 Ga0105248_10000629 Ga0105248_1000062926 175
85 3300009545 Ga0105237_10006176 Ga0105237_100061766 175
86 3300009545 Ga0105237_10034064 Ga0105237_100340643 175
87 3300009551 Ga0105238_10006865 Ga0105238_100068653 175
88 3300009553 Ga0105249_10000426 Ga0105249_1000042612 175
89 3300010375 Ga0105239_12186151 Ga0105239_121861511 175
90 3300025298 Ga0209050_1006228 Ga0209050_100622811 175
91 3300025303 Ga0209051_1003165 Ga0209051_100316515 175
92 3300025304 Ga0209257_1000016 Ga0209257_1000016272 175
93 3300025903 Ga0207680_10219483 Ga0207680_102194832 175
94 3300025913 Ga0207695_10000007 Ga0207695_10000007785 175
95 3300025913 Ga0207695_10117495 Ga0207695_101174953 175
96 3300025914 Ga0207671_10029047 Ga0207671_100290472 175
97 3300025914 Ga0207671_10046468 Ga0207671_100464683 175
98 3300025924 Ga0207694_10000361 Ga0207694_1000036145 175
99 3300025961 Ga0207712_10000363 Ga0207712_1000036324 175
100 3300025986 Ga0207658_10000093 Ga0207658_1000009342 175
101 3300026035 Ga0207703_10505081 Ga0207703_105050811 175
102 3300026041 Ga0207639_10006670 Ga0207639_100066709 175
103 3300026067 Ga0207678_10003189 Ga0207678_1000318910 175
104 3300026142 Ga0207698_10034275 Ga0207698_100342754 175
105 3300026142 Ga0207698_10144686 Ga0207698_101446863 175
106 3300028794 Ga0307515_10017996 Ga0307515_100179965 175
107 3300031344 Ga0265316_10260138 Ga0265316_102601382 175
108 3300032002 Ga0307416_101577414 Ga0307416_1015774141 175
109 3300036401 Ga0373937_0101392 Ga0373937_0101392_707_1240 175
110 3300039438 Ga0436360_1084607 Ga0436360_1084607_785_1321 175
111 3300046453 Ga0495627_002244 Ga0495627_002244_8766_9368 175
112 3300046616 Ga0495668_0000042 Ga0495668_0000042_215751_216281 175
113 3300046692 Ga0495671_0073374 Ga0495671_0073374_161_763 175
114 3300047469 Ga0495673_0000225 Ga0495673_0000225_16435_17037 175
115 3300048920 Ga0496117_0089826 Ga0496117_0089826_20_556 175
116 3300048925 Ga0496122_0001038 Ga0496122_0001038_45716_46252 175
117 3300048926 Ga0496123_0000848 Ga0496123_0000848_45853_46389 175
118 3300048929 Ga0496126_0143245 Ga0496126_0143245_956_1492 175
119 3300053079 Ga0500610_0012448 Ga0500610_0012448_3181_3720 175
120 3300053142 Ga0500577_0014764 Ga0500577_0014764_253_855 175
121 3300053146 Ga0500588_0217769 Ga0500588_0217769_121_660 175
122 3300005331 Ga0070670_101135125 Ga0070670_1011351251 176
123 3300005334 Ga0068869_101310033 Ga0068869_1013100331 176
124 3300025942 Ga0207689_10592212 Ga0207689_105922121 176
125 3300031548 Ga0307408_100255656 Ga0307408_1002556563 176
126 3300031911 Ga0307412_10320954 Ga0307412_103209541 176
127 3300032005 Ga0307411_10511965 Ga0307411_105119652 176
128 3300049569 Ga0501032_0023190 Ga0501032_0023190_1644_2183 176
129 3300049579 Ga0501043_0109962 Ga0501043_0109962_121_660 176
130 3300049580 Ga0501046_0105911 Ga0501046_0105911_369_908 176
131 3300049581 Ga0501047_0001071 Ga0501047_0001071_14818_15357 176
132 3300049823 Ga0501044_0293702 Ga0501044_0293702_410_949 176
133 3300003320 rootH2_10108682 rootH2_101086822 177
134 3300005347 Ga0070668_100622696 Ga0070668_1006226961 177
135 3300005354 Ga0070675_100049177 Ga0070675_1000491771 177
136 3300005457 Ga0070662_101214332 Ga0070662_1012143321 177
137 3300005530 Ga0070679_100035326 Ga0070679_1000353263 177
138 3300025299 Ga0209256_1037697 Ga0209256_10376972 177
139 3300025937 Ga0207669_10488327 Ga0207669_104883272 177
140 3300031901 Ga0307406_11150879 Ga0307406_111508791 177
141 3300041512 Ga0451853_1746850 Ga0451853_1746850_825_1385 177
142 3300042012 Ga0439455_0149530 Ga0439455_0149530_82_627 177
143 3300044673 Ga0453683_0121596 Ga0453683_0121596_514_1056 177
144 3300046524 Ga0495648_0000075 Ga0495648_0000075_95439_95978 177
145 3300046660 Ga0495625_0008285 Ga0495625_0008285_3470_4009 177
146 3300046660 Ga0495625_0138845 Ga0495625_0138845_843_1379 177
147 3300003215 JGI25153J46596_10070292 JGI25153J46596_100702921 178
148 3300003791 Ga0055530_10005067 Ga0055530_100050673 178
149 3300003794 Ga0055531_10002796 Ga0055531_1000279611 178
150 3300025297 Ga0209758_1000933 Ga0209758_100093312 178
151 3300025298 Ga0209050_1000419 Ga0209050_100041912 178
152 3300025304 Ga0209257_1000441 Ga0209257_100044112 178

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13858

DUF4199

Protein of unknown function (DUF4199)

41

198

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
8fed-assembly1.cif.gz_K structure of mce1-lucb complex from mycobacterium smegmatis (map1) 0.7031 4 166
8fed-assembly1.cif.gz_K structure of mce1-lucb complex from mycobacterium smegmatis (map1) 0.6567 4 166
6vum-assembly1.cif.gz_A structure of nevanimibe-bound human tetrameric acat1 0.5288 10 90
8hd0-assembly1.cif.gz_D cell divisome spg hydrolysis machinery ftsex-envc 0.49 25 172
5xu1-assembly1.cif.gz_M structure of a non-canonical abc transporter from streptococcus pneumoniae r6 0.4072 35 162
ID Description Score Start End Superfamily
af_B9FMX4_255_697_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4191 5 87 1.20.1250.20
af_Q2G1C5_166_358_1.10.1760.20 Mainly Alpha;Orthogonal Bundle;Arp2/3 complex 21 kDa subunit ARPC3; 0.4132 5 165 1.10.1760.20
af_A0A0R0IQT8_358_462_1.20.58.1220 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Exo84p, C-terminal helical domain 0.4117 6 94 1.20.58.1220
af_F4I4B6_271_375_1.20.58.1220 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Exo84p, C-terminal helical domain 0.3911 1 161 1.20.58.1220
af_K7K1P3_273_377_1.20.58.1220 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Exo84p, C-terminal helical domain 0.3856 1 129 1.20.58.1220
ID Description Score Start End GO Terms
AF-A0A3D5HBS9-F1-model_v4 DUF4199 domain-containing protein 0.968 1 175 GO:0016020
AF-A0A3D5HBS9-F1-model_v4 DUF4199 domain-containing protein 0.9626 1 175 GO:0016020
AF-A0A444W434-F1-model_v4 DUF4199 domain containing protein 0.9591 34 167 GO:0016020
AF-A0A7Y5IBC7-F1-model_v4 DUF4199 domain-containing protein 0.9544 1 173 GO:0016020
AF-A0A846MVK0-F1-model_v4 Putative membrane protein 0.9515 1 174 GO:0016020

Feature Viewer

pLDDT pTM Quality
83.27 0.73 High
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Predicted Structure (AlphaFold2)

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