F205050

General Info

Members Datasets Scaffolds Average Seq Length
149 105 298 1010

Family's Representative Sequence

Representative Sequence 3300005334|Ga0068869_100011580|Ga0068869_1000115801
Length 1157
Sequence MKNYFFALTRSRLLSTFVLAFMIAGASPVFAQQFSSDLFKSLHWRNIGPFRGGRVRAIAGVPSTPNVFYMAQVNGGVWRTDDYGVTWRPIFDDQPTGSVGCIAVAPSDSNIIYVGSGEGLQRPDLSVGDGIYKSTDAGRSWTHLGLRDGQQIPQIAVDPRDPNRLLVAVAGHPYGPNEERGIFRSTDGGKTFEKVLYKDENIGGADVLIDPENPDIAYAGLCEARQGPWENAAWNGNGGGVFKSTDNGKTWRQLSGGLPAEIIQANLAIAPSSTKRVFASVALVGGLAIYRSDDGGDHWVKITTDARPAGRIGGGDLAVLRVDPKNADTVYSASIVSWKSTDGGKTWAAFRGAPIMLASDQGAIITVNGGKSWSSWYNQSTAQLYHVSADNAFPYRLCSGQQESGSACVSSRGNDGEITFREWHPVAAEEYGYVVADPLDPDIVYGGKLTRYDRRTAQAQNIMPKAFRSADFRVVRTQPVVFSPVDPHLLFFSTNTLWKTKDGGRNWDQISTDLTRKTFEVSETVGKFRSQPTAQPTQRGVIYAVAPSPLDVNLIWIGTDDGLIHRTVDGGAHWTDVTPKQLKPWQKISILDAGHFDKNTAYAAVNTLRLDDLRPHIYRTHDGGASWTEVTNGIPVNENTDVVREDPERKGLLFAGTERAVHVSFDDGDHWQSLRLNMGASSVRDLIVKGDDLCVATHGRGFWILDNITPLRQLQDAMVKAPAILFRPQTAVRVRWNTNTDTPLPPDEPAGENPPDGAMIDYYIGAGAPGPASLEIKDEAGQVVRRYTSGDPVPASDPTLNIPPYWVRPPQKLRSEPGMHRFLWDMHYAPVPGLLPQYPIAAIYRNTAPGATSPWAMPGKYTVVLTIGGKSYDQPLTLVMDPRVKTSNEDLAAQFRVSKQVYGEWLALNSISESLKRIQSQITELQARVLAGELKTHVSALADKLQAFSSAPTAAPGGAATAAARINLATTSGRVRTLFDLIEEVDLAPTPQATAAVSEVVKDSRSLQDTWQAIKTQDITALNAELRAAGLPVIEVSTNSSARLPREVSDPNDAEFGDELFSIDLLNCQPLSKRFGWGLGYDNVEVKGKEEDSCVIRMVTLWEGDYTISECRPKTSLERLGIIKGPLYNIGFKPQIENSLCKVIKSGHQFPGDLEPQ

Samples

Sample ID Description Type Environment
1 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
2 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
3 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
27 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
33 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
36 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
47 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
53 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
54 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
55 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
76 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
77 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
78 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
79 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
80 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
81 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
82 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
83 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
84 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
85 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
86 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
87 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
88 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
89 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
90 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
91 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
92 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
93 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
94 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
95 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
96 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
97 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
98 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
99 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
100 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
101 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
102 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
103 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
104 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
105 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 4.7
Rhizosphere 92.62
Stem 0
Stem Tuber 0
Unclassified 2.68

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068869_100011580 3300005334 Bacteria 5791
2 JGI24748J21848_1000022 3300002074 Bacteria 106580
3 JGI24034J26672_10000026 3300002239 Bacteria 109498
4 Ga0070683_100000059 3300005329 Bacteria 81605
5 Ga0070683_100034625 3300005329 Bacteria 4615
6 Ga0070670_100004101 3300005331 Bacteria 12170
7 Ga0070670_100008234 3300005331 Bacteria 8880
8 Ga0070682_100007235 3300005337 Bacteria 6253
9 Ga0070669_100004905 3300005353 Bacteria 9658
10 Ga0070703_10000494 3300005406 Bacteria 15513
11 Ga0070703_10001715 3300005406 Bacteria 6503
12 Ga0070713_100001878 3300005436 Bacteria 13545
13 Ga0070713_100003705 3300005436 Bacteria 10115
14 Ga0070705_100004365 3300005440 Bacteria 6884
15 Ga0070694_100001034 3300005444 Bacteria 15862
16 Ga0070694_100014547 3300005444 Bacteria 4926
17 Ga0070694_100023088 3300005444 Bacteria 3995
18 Ga0070706_100014576 3300005467 Bacteria 7264
19 Ga0070707_100000706 3300005468 Bacteria 33306
20 Ga0070707_100018207 3300005468 Bacteria 6610
21 Ga0070698_100000023 3300005471 Bacteria 102971
22 Ga0070698_100022221 3300005471 Bacteria 6639
23 Ga0070698_100026273 3300005471 Bacteria 6062
24 Ga0070699_100010804 3300005518 Bacteria 7901
25 Ga0070684_100000164 3300005535 Bacteria 45706
26 Ga0070697_100000331 3300005536 Bacteria 37194
27 Ga0070697_100002879 3300005536 Bacteria 13231
28 Ga0070697_100013525 3300005536 Bacteria 6400
29 Ga0070672_100012394 3300005543 Bacteria 5984
30 Ga0070695_100005137 3300005545 Bacteria 7718
31 Ga0070695_100009497 3300005545 Bacteria 5793
32 Ga0070696_100004738 3300005546 Bacteria 9093
33 Ga0070696_100029895 3300005546 Bacteria 3727
34 Ga0070693_100001138 3300005547 Bacteria 11928
35 Ga0070665_100014573 3300005548 Bacteria 7888
36 Ga0070664_100000622 3300005564 Bacteria 27108
37 Ga0068859_100002304 3300005617 Bacteria 19393
38 Ga0068864_100023164 3300005618 Bacteria 5214
39 Ga0068861_100001154 3300005719 Bacteria 16444
40 Ga0068861_100005318 3300005719 Bacteria 8692
41 Ga0068851_10001596 3300005834 Bacteria 9952
42 Ga0068858_100003191 3300005842 Bacteria 16382
43 Ga0081539_10002870 3300005985 Bacteria 22889
44 Ga0070717_10001497 3300006028 Bacteria 16156
45 Ga0075428_100004817 3300006844 Bacteria 14969
46 Ga0068865_100002032 3300006881 Bacteria 11941
47 Ga0068865_100023692 3300006881 Unclassified 4023
48 Ga0075436_100000026 3300006914 Bacteria 102984
49 Ga0097620_100002304 3300006931 Bacteria 19393
50 Ga0075435_100009761 3300007076 Bacteria 6980
51 Ga0099794_10001351 3300007265 Bacteria 8516
52 Ga0105240_10009337 3300009093 Bacteria 13901
53 Ga0111539_10003250 3300009094 Bacteria 21491
54 Ga0111539_10014675 3300009094 Bacteria 9775
55 Ga0111539_10021136 3300009094 Bacteria 8015
56 Ga0105245_10001616 3300009098 Bacteria 20503
57 Ga0105247_10000047 3300009101 Bacteria 151385
58 Ga0114129_10005082 3300009147 Bacteria 18522
59 Ga0114129_10010640 3300009147 Bacteria 13121
60 Ga0114129_10019426 3300009147 Bacteria 9675
61 Ga0114129_10022201 3300009147 Bacteria 9009
62 Ga0114129_10093001 3300009147 Bacteria 4178
63 Ga0105243_10001453 3300009148 Bacteria 20810
64 Ga0105242_10000807 3300009176 Bacteria 24281
65 Ga0105242_10001147 3300009176 Bacteria 20875
66 Ga0105237_10002068 3300009545 Bacteria 25449
67 Ga0105249_10001721 3300009553 Bacteria 19147
68 Ga0157373_10039657 3300013100 Unclassified 3371
69 Ga0157369_10006317 3300013105 Bacteria 13758
70 Ga0157378_10001622 3300013297 Bacteria 20343
71 Ga0157378_10019379 3300013297 Bacteria 5981
72 Ga0163162_10038004 3300013306 Bacteria 4805
73 Ga0157372_10004785 3300013307 Bacteria 14381
74 Ga0157372_10055722 3300013307 Bacteria 4415
75 Ga0157375_10002427 3300013308 Bacteria 16136
76 Ga0163163_10008869 3300014325 Bacteria 8953
77 Ga0163163_10053235 3300014325 Bacteria 3995
78 Ga0157380_10004991 3300014326 Bacteria 9245
79 Ga0213876_10008781 3300021384 Bacteria 5457
80 Ga0207656_10004028 3300025321 Bacteria 5097
81 Ga0207653_10000151 3300025885 Bacteria 49584
82 Ga0207653_10001567 3300025885 Bacteria 7390
83 Ga0207710_10000001 3300025900 Bacteria 1797433
84 Ga0207684_10005145 3300025910 Bacteria 12187
85 Ga0207684_10011722 3300025910 Bacteria 7647
86 Ga0207693_10016476 3300025915 Bacteria 5905
87 Ga0207652_10018577 3300025921 Bacteria 5704
88 Ga0207646_10000700 3300025922 Bacteria 43479
89 Ga0207646_10004469 3300025922 Bacteria 15156
90 Ga0207646_10015038 3300025922 Bacteria 7324
91 Ga0207681_10000786 3300025923 Bacteria 20924
92 Ga0207650_10005052 3300025925 Bacteria 9001
93 Ga0207687_10002075 3300025927 Bacteria 13708
94 Ga0207686_10000692 3300025934 Bacteria 20897
95 Ga0207686_10001492 3300025934 Bacteria 13197
96 Ga0207709_10001010 3300025935 Bacteria 20871
97 Ga0207704_10002974 3300025938 Bacteria 7660
98 Ga0207665_10010114 3300025939 Bacteria 6195
99 Ga0207689_10007249 3300025942 Bacteria 9737
100 Ga0207661_10000482 3300025944 Bacteria 25729
101 Ga0207703_10000186 3300026035 Bacteria 72779
102 Ga0207708_10004815 3300026075 Bacteria 9938
103 Ga0207676_10016757 3300026095 Bacteria 5305
104 Ga0207676_10028675 3300026095 Bacteria 4160
105 Ga0207675_100007762 3300026118 Bacteria 10123
106 Ga0207675_100019484 3300026118 Bacteria 6331
107 Ga0207428_10019712 3300027907 Bacteria 5747
108 Ga0265325_10004394 3300031241 Bacteria 8912
109 Ga0373926_0001804 3300035083 Bacteria 6638
110 Ga0373926_0007527 3300035083 Bacteria 3626
111 Ga0373936_0012324 3300035113 Bacteria 3251
112 Ga0373943_0001479 3300035170 Bacteria 10640
113 Ga0373924_0000203 3300035410 Bacteria 17951
114 Ga0373935_0000372 3300035692 Bacteria 22976
115 Ga0373927_0001474 3300035695 Bacteria 17712
116 Ga0373927_0003894 3300035695 Bacteria 10588
117 Ga0373947_0002209 3300035725 Bacteria 11789
118 Ga0373947_0004852 3300035725 Bacteria 7860
119 Ga0373925_0004317 3300037068 Bacteria 10764
120 Ga0373925_0004475 3300037068 Bacteria 10563
121 Ga0373925_0014010 3300037068 Bacteria 5804
122 Ga0436364_0093151 3300037853 Bacteria 54720
123 Ga0436365_1272136 3300039437 Bacteria 11385
124 Ga0436365_1767449 3300039437 Bacteria 8467
125 Ga0466957_0000231 3300044842 Bacteria 26293
126 Ga0495651_0007617 3300046462 Bacteria 8277
127 Ga0495580_0000411 3300046472 Bacteria 35418
128 Ga0495580_0011590 3300046472 Bacteria 6820
129 Ga0495645_0003622 3300046543 Bacteria 10486
130 Ga0495645_0027948 3300046543 Unclassified 4097
131 Ga0495604_0047794 3300047317 Bacteria 3332
132 Ga0495675_0007642 3300047444 Bacteria 6667
133 Ga0496102_0046280 3300048905 Bacteria 3951
134 Ga0496104_0003997 3300048907 Bacteria 12771
135 Ga0496105_0008025 3300048908 Bacteria 8202
136 Ga0496106_0010642 3300048909 Bacteria 6797
137 Ga0496109_0001089 3300048912 Bacteria 22572
138 Ga0496112_0001436 3300048915 Bacteria 18282
139 Ga0496115_0000589 3300048918 Bacteria 27866
140 nmdc:mga05p37_21711_c1 3300050507 Bacteria 7776
141 nmdc:mga05p37_3454_c1 3300050507 Bacteria 18448
142 nmdc:mga05p37_69805_c1 3300050507 Bacteria 4322
143 nmdc:mga08y16_2602_c1 3300050511 Bacteria 18537
144 nmdc:mga08y16_744_c1 3300050511 Bacteria 31037
145 nmdc:mga0n895_31869_c1 3300050512 Bacteria 5053
146 nmdc:mga08x19_1069_c1 3300050514 Bacteria 17091
147 nmdc:mga08x19_26_c1 3300050514 Bacteria 228913
148 nmdc:mga0a205_36434_c1 3300050515 Bacteria 4726
149 Ga0495601_0016401 3300053077 Unclassified 4488
150 Ga0068869_100011580
151 JGI24748J21848_1000022
152 JGI24034J26672_10000026
153 Ga0070683_100000059
154 Ga0070683_100034625
155 Ga0070670_100004101
156 Ga0070670_100008234
157 Ga0070682_100007235
158 Ga0070669_100004905
159 Ga0070703_10000494
160 Ga0070703_10001715
161 Ga0070713_100001878
162 Ga0070713_100003705
163 Ga0070705_100004365
164 Ga0070694_100001034
165 Ga0070694_100014547
166 Ga0070694_100023088
167 Ga0070706_100014576
168 Ga0070707_100000706
169 Ga0070707_100018207
170 Ga0070698_100000023
171 Ga0070698_100022221
172 Ga0070698_100026273
173 Ga0070699_100010804
174 Ga0070684_100000164
175 Ga0070697_100000331
176 Ga0070697_100002879
177 Ga0070697_100013525
178 Ga0070672_100012394
179 Ga0070695_100005137
180 Ga0070695_100009497
181 Ga0070696_100004738
182 Ga0070696_100029895
183 Ga0070693_100001138
184 Ga0070665_100014573
185 Ga0070664_100000622
186 Ga0068859_100002304
187 Ga0068864_100023164
188 Ga0068861_100001154
189 Ga0068861_100005318
190 Ga0068851_10001596
191 Ga0068858_100003191
192 Ga0081539_10002870
193 Ga0070717_10001497
194 Ga0075428_100004817
195 Ga0068865_100002032
196 Ga0068865_100023692
197 Ga0075436_100000026
198 Ga0097620_100002304
199 Ga0075435_100009761
200 Ga0099794_10001351
201 Ga0105240_10009337
202 Ga0111539_10003250
203 Ga0111539_10014675
204 Ga0111539_10021136
205 Ga0105245_10001616
206 Ga0105247_10000047
207 Ga0114129_10005082
208 Ga0114129_10010640
209 Ga0114129_10019426
210 Ga0114129_10022201
211 Ga0114129_10093001
212 Ga0105243_10001453
213 Ga0105242_10000807
214 Ga0105242_10001147
215 Ga0105237_10002068
216 Ga0105249_10001721
217 Ga0157373_10039657
218 Ga0157369_10006317
219 Ga0157378_10001622
220 Ga0157378_10019379
221 Ga0163162_10038004
222 Ga0157372_10004785
223 Ga0157372_10055722
224 Ga0157375_10002427
225 Ga0163163_10008869
226 Ga0163163_10053235
227 Ga0157380_10004991
228 Ga0213876_10008781
229 Ga0207656_10004028
230 Ga0207653_10000151
231 Ga0207653_10001567
232 Ga0207710_10000001
233 Ga0207684_10005145
234 Ga0207684_10011722
235 Ga0207693_10016476
236 Ga0207652_10018577
237 Ga0207646_10000700
238 Ga0207646_10004469
239 Ga0207646_10015038
240 Ga0207681_10000786
241 Ga0207650_10005052
242 Ga0207687_10002075
243 Ga0207686_10000692
244 Ga0207686_10001492
245 Ga0207709_10001010
246 Ga0207704_10002974
247 Ga0207665_10010114
248 Ga0207689_10007249
249 Ga0207661_10000482
250 Ga0207703_10000186
251 Ga0207708_10004815
252 Ga0207676_10016757
253 Ga0207676_10028675
254 Ga0207675_100007762
255 Ga0207675_100019484
256 Ga0207428_10019712
257 Ga0265325_10004394
258 Ga0373926_0001804
259 Ga0373926_0007527
260 Ga0373936_0012324
261 Ga0373943_0001479
262 Ga0373924_0000203
263 Ga0373935_0000372
264 Ga0373927_0001474
265 Ga0373927_0003894
266 Ga0373947_0002209
267 Ga0373947_0004852
268 Ga0373925_0004317
269 Ga0373925_0004475
270 Ga0373925_0014010
271 Ga0436364_0093151
272 Ga0436365_1272136
273 Ga0436365_1767449
274 Ga0466957_0000231
275 Ga0495651_0007617
276 Ga0495580_0000411
277 Ga0495580_0011590
278 Ga0495645_0003622
279 Ga0495645_0027948
280 Ga0495604_0047794
281 Ga0495675_0007642
282 Ga0496102_0046280
283 Ga0496104_0003997
284 Ga0496105_0008025
285 Ga0496106_0010642
286 Ga0496109_0001089
287 Ga0496112_0001436
288 Ga0496115_0000589
289 nmdc:mga05p37_21711_c1
290 nmdc:mga05p37_3454_c1
291 nmdc:mga05p37_69805_c1
292 nmdc:mga08y16_2602_c1
293 nmdc:mga08y16_744_c1
294 nmdc:mga0n895_31869_c1
295 nmdc:mga08x19_1069_c1
296 nmdc:mga08x19_26_c1
297 nmdc:mga0a205_36434_c1
298 Ga0495601_0016401

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF15902

Sortilin-Vps10

Sortilin, neurotensin receptor 3,

75

214

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3jcm-assembly1.cif.gz_B cryo-em structure of the spliceosomal u4/u6.u5 tri-snrnp 0.7461 359 682
6ahd-assembly1.cif.gz_K the cryo-em structure of human pre-catalytic spliceosome (b complex) at 3.8 angstrom resolution 0.746 358 679
6ven-assembly1.cif.gz_L yeast compass in complex with a ubiquitinated nucleosome 0.7198 350 681
4edq-assembly2.cif.gz_B mbp-fusion protein of myosin-binding protein c residues 149-269 0.7166 834 856
6qtu-assembly1.cif.gz_A crystal structure of arabidopsis wd40 domain in complex with a bbx transcription factor 0.7084 456 673
ID Description Score Start End Superfamily
af_Q54CB5_2274_2430_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.8019 454 640 2.120.10.30
af_F1M8Z5_136_280_2.40.128.630 Mainly Beta;Beta Barrel;Lipocalin; 0.7906 604 680 2.40.128.630
af_Q9U0J4_195_468_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7891 464 680 2.130.10.10
af_Q6NLV4_278_422_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.783 571 680 2.130.10.10
af_Q09150_1_302_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7796 358 681 2.130.10.10
ID Description Score Start End GO Terms
AF-A0A2V7MI61-F1-model_v4 Glycosyl hydrolase 0.9913 608 689
AF-A0A2V8P820-F1-model_v4 Glycoside hydrolase 0.979 37 209 GO:0000272
GO:0010411
GO:0016798
AF-A0A2V8GKS8-F1-model_v4 Glycosyl hydrolase 0.974 51 201 GO:0010411
GO:0016787
AF-A0A3B9JSG1-F1-model_v4 deleted 0.9733 584 693
AF-A0A7W1E5Q1-F1-model_v4 Glycoside hydrolase 0.9697 32 799 GO:0010411
GO:0016787

Map