F204139

General Info

Members Datasets Scaffolds Average Seq Length
148 98 116 782

Family's Representative Sequence

Representative Sequence 3300046524|Ga0495648_0017125|Ga0495648_0017125_725_3241
Length 838
Sequence LQKNSPALGRQTSYRANNKPVKIYYLSKTMHFTATCPSTFVKYRPVLLKVFNGIKLASLFVLLIVSCQASAQVASNGAIKGTVKTADGKAAEYVNITITETSQGAVTTQSGHYLIKSIKPGNYTLVASFIGLQTQTRQVAVTAGETTTINFVLSEGGKQLQEVYIQSAKHNKFLKKETEDVARLPLKNLENPQVYSVVTSELMKEQVVTSYVDGFKNIPGTGVPLVYNNGRTTLLSRGFVTGNFIRNSVAGYNFNSIDPADIEKIEAIKGPTGTLFNSSLASFGGLFNRVTKQPFETARTEITYQTGSFDLNRLTADVNLPLNTDKTVLFRINTALHNEHSFQDAGFNRSFFVAPSVTYIVNDRLSVDLNLEIGNSNATSAYRLAPDTKGKIYNVKDLGIDYKRSFANNNVDYLSRQIDVYGLIKYKISDNWKSQTMFNKTYSSTKGFVTLLTLVDSVKKIKQQATKEDYPYYITNVQQNFIGDFKIGQFRNRIVAGVEYYNQKSNNANVTVTMPAISYLDPGAAYNNFTADKLSALVAAATPKASDYVQNNQSSYAAYVSDVFNITDRLNAMASIRIDRFDNKGAYTPADGKITGNFKQTAWSPKLGMVYELVKGQVSLFGNYMNGFNNVSATSFDNTPFKPQYANQWEGGVKVDAWDHKISSTVSYYDISVTNTTMDDPAHAGFSTQAGTQLSKGIEAELIANPFKGFNIVAGFAYNDSKITNAAAGTGLQGLRPANAGPARLANLWMSYRITNGGLQGLGAGVGGNYGSQSYQTNTQTFKFVIPSYITIDATVFYDKPKYRVGFKLDNLTNEKYWSFRLAPQNPTRGTLSLSIKF

Samples

Sample ID Description Type Environment
1 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
2 2585428060 Chryseobacterium sp. OV715 Isolate Rhizosphere
3 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
4 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
5 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
6 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
7 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
8 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
9 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
10 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
11 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
12 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
13 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
14 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
15 2818991444 Filimonas endophytica 3197 Isolate Unclassified
16 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
17 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
18 2903895155 Flavobacterium sp. HBTb2-11-1 Isolate Rhizosphere
19 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
20 2914759650 Rhizosphaericola mali Isolate Rhizosphere
21 2919191525 Flavobacterium sp. 2755 Isolate Rhizosphere
22 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
23 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
24 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
25 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
26 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
27 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
28 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
29 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
30 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
31 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
32 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
33 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
34 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
35 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
36 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
37 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
38 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
39 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
40 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
41 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
42 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
45 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
53 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
54 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
55 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
56 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
57 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
58 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
59 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
69 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
70 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
71 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
72 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
73 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
74 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
75 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
76 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
77 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
78 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
79 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
80 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
81 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
82 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
83 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
84 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
85 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
86 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
87 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
88 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
89 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
90 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
91 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
92 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
93 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
94 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
95 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
96 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
97 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
98 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 78.38
Metatranscriptomes 0
Isolates 21.62

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.16
Nodule 0.68
Rhizoplane 0.68
Rhizosphere 62.84
Stem 0
Stem Tuber 0
Unclassified 23.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10001446 3300001990 Bacteria 8469
2 JGI24735J21928_10000027 3300002067 Bacteria 83494
3 JGI25162J39368_1000121 3300002737 Bacteria 85899
4 rootH2_10018853 3300003320 Bacteria 28884
5 rootH2_10063694 3300003320 Bacteria 5627
6 rootH2_10236989 3300003320 Bacteria 6495
7 rootL2_10222184 3300003322 Bacteria 9614
8 rootH1_10010409 3300003323 Bacteria 11118
9 rootH1_10053683 3300003323 Bacteria 6883
10 rootH1_10065349 3300003323 Bacteria 15352
11 rootH1_10067199 3300003323 Unclassified 4915
12 rootH1_10100744 3300003323 Unclassified 3894
13 rootH1_10165434 3300003323 Bacteria 4471
14 JGI25160J50197_1000750 3300003354 Bacteria 17574
15 Ga0055531_10000056 3300003794 Bacteria 123579
16 Ga0065714_10005997 3300005288 Bacteria 9115
17 Ga0065704_10074355 3300005289 Bacteria 6337
18 Ga0068853_100071192 3300005539 Unclassified 3028
19 Ga0070665_100000052 3300005548 Bacteria 245694
20 Ga0068856_100078567 3300005614 Bacteria 3272
21 Ga0068860_100000053 3300005843 Bacteria 207331
22 Ga0068860_100014468 3300005843 Bacteria 7726
23 Ga0099824_1002241 3300006942 Bacteria 28219
24 Ga0105244_10000007 3300009036 Bacteria 352275
25 Ga0105240_10000374 3300009093 Bacteria 83962
26 Ga0105240_10001744 3300009093 Bacteria 36730
27 Ga0105240_10002505 3300009093 Bacteria 29509
28 Ga0105240_10096142 3300009093 Bacteria 3611
29 Ga0105241_10037691 3300009174 Unclassified 3642
30 Ga0105237_10000107 3300009545 Bacteria 117149
31 Ga0105237_10002326 3300009545 Bacteria 23593
32 Ga0105237_10005023 3300009545 Bacteria 15057
33 Ga0105237_10009940 3300009545 Bacteria 10150
34 Ga0105237_10016440 3300009545 Bacteria 7686
35 Ga0105237_10097188 3300009545 Unclassified 2935
36 Ga0105238_10066468 3300009551 Unclassified 3607
37 Ga0105238_10121270 3300009551 Bacteria 2594
38 Ga0105239_10000132 3300010375 Bacteria 105380
39 Ga0105239_10002444 3300010375 Bacteria 23693
40 Ga0105239_10019048 3300010375 Bacteria 7584
41 Ga0105239_10074494 3300010375 Unclassified 3732
42 Ga0105239_10085071 3300010375 Unclassified 3485
43 Ga0163162_10000155 3300013306 Bacteria 63251
44 Ga0163162_10000166 3300013306 Bacteria 60654
45 Ga0163162_10002213 3300013306 Bacteria 18252
46 Ga0163162_10105754 3300013306 Bacteria 2909
47 Ga0182006_1003782 3300015261 Bacteria 7622
48 Ga0163161_10000174 3300017792 Bacteria 59101
49 Ga0163161_10000178 3300017792 Bacteria 58130
50 Ga0209436_102034 3300025208 Bacteria 6378
51 Ga0209437_100017 3300025233 Bacteria 694471
52 Ga0209129_1006626 3300025258 Bacteria 3681
53 Ga0209130_1001980 3300025284 Bacteria 11289
54 Ga0207426_1000002 3300025302 Bacteria 1249660
55 Ga0207426_1000405 3300025302 Bacteria 72535
56 Ga0209257_1000077 3300025304 Bacteria 317964
57 Ga0207655_1000196 3300025728 Bacteria 106283
58 Ga0207654_10002610 3300025911 Bacteria 9144
59 Ga0207695_10001413 3300025913 Bacteria 40444
60 Ga0207695_10001603 3300025913 Bacteria 36738
61 Ga0207695_10004747 3300025913 Bacteria 18391
62 Ga0207695_10030685 3300025913 Bacteria 5914
63 Ga0207671_10000904 3300025914 Bacteria 37479
64 Ga0207671_10001716 3300025914 Bacteria 24737
65 Ga0207671_10004532 3300025914 Bacteria 13205
66 Ga0207671_10018895 3300025914 Bacteria 5280
67 Ga0207671_10026769 3300025914 Unclassified 4316
68 Ga0207694_10027261 3300025924 Unclassified 4350
69 Ga0207640_10022845 3300025981 Bacteria 3750
70 Ga0268266_10000070 3300028379 Bacteria 235423
71 Ga0268264_10000098 3300028381 Bacteria 229055
72 Ga0268264_10015037 3300028381 Bacteria 6348
73 Ga0307515_10000003 3300028794 Bacteria 891317
74 Ga0307515_10000316 3300028794 Bacteria 119243
75 Ga0307515_10050047 3300028794 Bacteria 6267
76 Ga0307511_10000085 3300030521 Bacteria 78341
77 Ga0307509_10050077 3300031507 Bacteria 4474
78 Ga0307508_10001161 3300031616 Bacteria 30284
79 Ga0307516_10000330 3300031730 Bacteria 61733
80 Ga0307516_10029555 3300031730 Bacteria 5540
81 Ga0307416_100006152 3300032002 Bacteria 7481
82 Ga0307507_10000071 3300033179 Bacteria 158391
83 Ga0307510_10001851 3300033180 Bacteria 23702
84 Ga0466972_0000912 3300044658 Bacteria 14204
85 Ga0466972_0020000 3300044658 Unclassified 3346
86 Ga0466968_0007936 3300044735 Unclassified 4054
87 Ga0466957_0000009 3300044842 Bacteria 76227
88 Ga0495638_0000008 3300046460 Bacteria 565643
89 Ga0495650_0000098 3300046471 Bacteria 215716
90 Ga0495585_0001556 3300046492 Bacteria 17790
91 Ga0495606_0000021 3300046507 Bacteria 271238
92 Ga0495606_0005612 3300046507 Bacteria 11927
93 Ga0495610_0000349 3300046512 Bacteria 48625
94 Ga0495610_0000747 3300046512 Bacteria 30695
95 Ga0495610_0001062 3300046512 Bacteria 25264
96 Ga0495616_0002506 3300046513 Bacteria 12142
97 Ga0495648_0017125 3300046524 Bacteria 5192
98 Ga0495633_0000161 3300046558 Bacteria 87685
99 Ga0495633_0002468 3300046558 Bacteria 13049
100 Ga0495668_0000179 3300046616 Bacteria 94559
101 Ga0495668_0004570 3300046616 Bacteria 9736
102 Ga0495611_0000106 3300046648 Bacteria 58129
103 Ga0495625_0000183 3300046660 Bacteria 98174
104 Ga0495661_0003702 3300046665 Bacteria 11231
105 Ga0495649_0000046 3300046694 Bacteria 120254
106 Ga0495687_000006 3300047443 Bacteria 571936
107 Ga0495687_001558 3300047443 Bacteria 20825
108 Ga0495686_0000083 3300047472 Bacteria 198933
109 Ga0500578_0001015 3300053086 Bacteria 30967
110 Ga0500644_0010196 3300053088 Unclassified 2537
111 Ga0500583_0000007 3300053092 Bacteria 162080
112 Ga0500583_0003638 3300053092 Bacteria 4890
113 Ga0500562_000063 3300053108 Bacteria 52346
114 Ga0500622_0001003 3300053156 Bacteria 23814
115 Ga0500622_0003244 3300053156 Bacteria 11047
116 Ga0500622_0004573 3300053156 Bacteria 8618

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009093 Ga0105240_10002505 Ga0105240_100025059 618
2 3300025913 Ga0207695_10004747 Ga0207695_100047479 618
3 3300053088 Ga0500644_0010196 Ga0500644_0010196_377_2488 681
4 3300009545 Ga0105237_10097188 Ga0105237_100971882 692
5 3300025914 Ga0207671_10026769 Ga0207671_100267693 692
6 3300009551 Ga0105238_10121270 Ga0105238_101212702 702
7 3300044658 Ga0466972_0020000 Ga0466972_0020000_776_2998 703
8 3300025914 Ga0207671_10000904 Ga0207671_100009043 740
9 3300025208 Ga0209436_102034 Ga0209436_1020341 742
10 3300025284 Ga0209130_1001980 Ga0209130_10019809 742
11 3300025302 Ga0207426_1000405 Ga0207426_100040548 742
12 3300031730 Ga0307516_10029555 Ga0307516_100295551 744
13 3300005843 Ga0068860_100014468 Ga0068860_1000144685 745
14 3300009545 Ga0105237_10002326 Ga0105237_100023262 745
15 3300010375 Ga0105239_10074494 Ga0105239_100744942 745
16 3300013306 Ga0163162_10105754 Ga0163162_101057541 745
17 3300025914 Ga0207671_10001716 Ga0207671_100017166 745
18 3300028381 Ga0268264_10015037 Ga0268264_100150372 745
19 3300003320 rootH2_10063694 rootH2_100636943 746
20 3300053092 Ga0500583_0000007 Ga0500583_0000007_13313_15664 746
21 3300046648 Ga0495611_0000106 Ga0495611_0000106_31767_34214 747
22 3300025913 Ga0207695_10030685 Ga0207695_100306852 748
23 3300030521 Ga0307511_10000085 Ga0307511_1000008516 749
24 3300046616 Ga0495668_0004570 Ga0495668_0004570_2521_4893 750
25 3300053156 Ga0500622_0003244 Ga0500622_0003244_4171_6528 751
26 3300031616 Ga0307508_10001161 Ga0307508_1000116111 753
27 3300053156 Ga0500622_0004573 Ga0500622_0004573_1703_4072 755
28 3300005548 Ga0070665_100000052 Ga0070665_100000052119 756
29 3300028379 Ga0268266_10000070 Ga0268266_1000007062 756
30 iso_pu_bacteria 2945977869 2945980960 758
31 3300009545 Ga0105237_10000107 Ga0105237_1000010777 759
32 3300003322 rootL2_10222184 rootL2_102221848 760
33 3300003323 rootH1_10065349 rootH1_100653498 760
34 3300044842 Ga0466957_0000009 Ga0466957_0000009_14092_16434 760
35 3300047443 Ga0495687_000006 Ga0495687_000006_303832_306192 760
36 3300005843 Ga0068860_100000053 Ga0068860_100000053188 761
37 3300028381 Ga0268264_10000098 Ga0268264_10000098186 761
38 3300013306 Ga0163162_10000166 Ga0163162_1000016613 762
39 3300053156 Ga0500622_0001003 Ga0500622_0001003_21257_23560 763
40 3300009093 Ga0105240_10001744 Ga0105240_1000174425 765
41 3300025913 Ga0207695_10001603 Ga0207695_100016039 765
42 iso_pu_bacteria 2585428060 2587748670 765
43 iso_pu_bacteria 2588253712 2588447604 765
44 iso_pu_bacteria 2588254257 2590610248 765
45 iso_pu_bacteria 2946019816 2946024120 765
46 3300003323 rootH1_10067199 rootH1_100671992 766
47 3300013306 Ga0163162_10002213 Ga0163162_100022136 766
48 iso_pu_bacteria 2739367874 2740057172 766
49 iso_pu_bacteria 2852627209 2852632238 766
50 iso_pu_bacteria 2914759650 2914762784 766
51 3300003320 rootH2_10236989 rootH2_102369894 767
52 3300003323 rootH1_10010409 rootH1_100104095 767
53 3300003354 JGI25160J50197_1000750 JGI25160J50197_100075011 767
54 3300005289 Ga0065704_10074355 Ga0065704_100743552 767
55 3300025302 Ga0207426_1000002 Ga0207426_1000002235 767
56 iso_pu_bacteria 2896109856 2896114113 767
57 iso_pu_bacteria 2929177148 2929180390 767
58 iso_pu_bacteria 2945977869 2945982783 767
59 iso_pu_bacteria 2946013367 2946017824 767
60 3300003320 rootH2_10018853 rootH2_1001885310 768
61 3300003323 rootH1_10053683 rootH1_100536838 768
62 3300005539 Ga0068853_100071192 Ga0068853_1000711922 768
63 3300005614 Ga0068856_100078567 Ga0068856_1000785672 768
64 3300009093 Ga0105240_10000374 Ga0105240_1000037433 768
65 3300009174 Ga0105241_10037691 Ga0105241_100376913 768
66 3300009545 Ga0105237_10009940 Ga0105237_100099403 768
67 3300009551 Ga0105238_10066468 Ga0105238_100664682 768
68 3300010375 Ga0105239_10085071 Ga0105239_100850712 768
69 3300017792 Ga0163161_10000178 Ga0163161_1000017817 768
70 3300025911 Ga0207654_10002610 Ga0207654_100026106 768
71 3300025913 Ga0207695_10001413 Ga0207695_1000141314 768
72 3300025914 Ga0207671_10004532 Ga0207671_100045326 768
73 3300025924 Ga0207694_10027261 Ga0207694_100272613 768
74 3300044658 Ga0466972_0000912 Ga0466972_0000912_179_2527 768
75 3300044735 Ga0466968_0007936 Ga0466968_0007936_1306_3654 768
76 3300053092 Ga0500583_0003638 Ga0500583_0003638_146_2497 768
77 iso_pu_bacteria 2929154850 2929159081 768
78 iso_pu_bacteria 2946013367 2946019639 768
79 3300031730 Ga0307516_10000330 Ga0307516_1000033050 769
80 3300009545 Ga0105237_10016440 Ga0105237_100164403 770
81 3300010375 Ga0105239_10019048 Ga0105239_100190483 770
82 iso_pu_bacteria 2818991444 2819589431 770
83 iso_pu_bacteria 2929177148 2929178559 770
84 3300003323 rootH1_10100744 rootH1_101007441 772
85 3300003323 rootH1_10165434 rootH1_101654342 772
86 3300028794 Ga0307515_10050047 Ga0307515_100500473 772
87 3300033180 Ga0307510_10001851 Ga0307510_1000185110 772
88 3300053086 Ga0500578_0001015 Ga0500578_0001015_2836_5235 772
89 3300028794 Ga0307515_10000003 Ga0307515_10000003747 773
90 iso_pu_bacteria 2519899754 2520882446 773
91 iso_pu_bacteria 2643221600 2644009466 773
92 iso_pu_bacteria 2643221716 2644642429 773
93 iso_pu_bacteria 2816332280 2817416504 773
94 iso_pu_bacteria 2903895155 2903897622 773
95 iso_pu_bacteria 2904555929 2904559293 773
96 iso_pu_bacteria 2919191525 2919194502 773
97 3300003794 Ga0055531_10000056 Ga0055531_1000005682 774
98 3300025304 Ga0209257_1000077 Ga0209257_1000077163 774
99 3300053108 Ga0500562_000063 Ga0500562_000063_2698_5070 774
100 3300031507 Ga0307509_10050077 Ga0307509_100500771 775
101 3300033179 Ga0307507_10000071 Ga0307507_10000071100 775
102 3300006942 Ga0099824_1002241 Ga0099824_100224114 777
103 3300013306 Ga0163162_10000155 Ga0163162_1000015558 777
104 3300015261 Ga0182006_1003782 Ga0182006_10037823 777
105 3300032002 Ga0307416_100006152 Ga0307416_1000061524 777
106 3300046460 Ga0495638_0000008 Ga0495638_0000008_154687_157068 778
107 3300046512 Ga0495610_0000747 Ga0495610_0000747_7464_9863 778
108 3300046512 Ga0495610_0001062 Ga0495610_0001062_17196_19595 778
109 3300017792 Ga0163161_10000174 Ga0163161_1000017424 780
110 3300002737 JGI25162J39368_1000121 JGI25162J39368_100012161 781
111 3300009093 Ga0105240_10096142 Ga0105240_100961422 781
112 3300009545 Ga0105237_10005023 Ga0105237_100050236 781
113 3300010375 Ga0105239_10000132 Ga0105239_100001329 781
114 3300010375 Ga0105239_10002444 Ga0105239_100024448 781
115 3300025233 Ga0209437_100017 Ga0209437_100017481 781
116 3300025258 Ga0209129_1006626 Ga0209129_10066264 781
117 3300025914 Ga0207671_10018895 Ga0207671_100188951 781
118 3300025981 Ga0207640_10022845 Ga0207640_100228453 781
119 iso_pu_bacteria 2738541279 2738736593 781
120 iso_pu_bacteria 2738541285 2738766768 781
121 iso_pu_bacteria 2738543007 2739218175 781
122 iso_pu_bacteria 2739367857 2740001055 781
123 iso_pu_bacteria 2739367858 2740005871 781
124 3300005288 Ga0065714_10005997 Ga0065714_1000599712 783
125 3300009036 Ga0105244_10000007 Ga0105244_1000000743 785
126 3300025728 Ga0207655_1000196 Ga0207655_100019622 785
127 3300046507 Ga0495606_0005612 Ga0495606_0005612_4915_7323 788
128 3300046471 Ga0495650_0000098 Ga0495650_0000098_203696_206107 791
129 3300046513 Ga0495616_0002506 Ga0495616_0002506_2834_5245 791
130 3300046660 Ga0495625_0000183 Ga0495625_0000183_9604_12015 791
131 3300046665 Ga0495661_0003702 Ga0495661_0003702_3744_6155 791
132 3300046694 Ga0495649_0000046 Ga0495649_0000046_9700_12111 791
133 3300047472 Ga0495686_0000083 Ga0495686_0000083_151636_154059 795
134 3300028794 Ga0307515_10000316 Ga0307515_1000031647 796
135 3300046524 Ga0495648_0017125 Ga0495648_0017125_725_3241 796
136 3300046558 Ga0495633_0000161 Ga0495633_0000161_52373_54802 796
137 3300046616 Ga0495668_0000179 Ga0495668_0000179_80479_82995 796
138 3300046507 Ga0495606_0000021 Ga0495606_0000021_257679_260111 798
139 3300046512 Ga0495610_0000349 Ga0495610_0000349_42287_44719 798
140 3300046558 Ga0495633_0002468 Ga0495633_0002468_2644_5076 798
141 iso_pu_bacteria 2599185184 2599481781 799
142 iso_pu_bacteria 2928078545 2928082063 799
143 iso_pu_bacteria 2928147474 2928152081 799
144 iso_pu_bacteria 2932082852 2932088099 799
145 3300046492 Ga0495585_0001556 Ga0495585_0001556_2313_4751 800
146 3300047443 Ga0495687_001558 Ga0495687_001558_10844_13282 800
147 3300001990 JGI24737J22298_10001446 JGI24737J22298_100014469 803
148 3300002067 JGI24735J21928_10000027 JGI24735J21928_100000278 803

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13620

CarboxypepD_reg

Carboxypeptidase regulatory-like domain

78

154

0.97

PF13715

CarbopepD_reg_2

CarboxypepD_reg-like domain

79

165

0.97

PF07715

Plug

TonB-dependent Receptor Plug Domain

187

284

0.94

PF00593

TonB_dep_Rec_b-barrel

TonB dependent receptor-like, beta-barrel

358

812

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
6z8a-assembly1.cif.gz_A outer membrane foxa in complex with nocardamine 0.8962 152 803
3qlb-assembly2.cif.gz_B enantiopyochelin outer membrane tonb-dependent transporter from pseudomonas fluorescens bound to the ferri-enantiopyochelin 0.8928 154 803
2nsm-assembly1.cif.gz_A crystal structure of the human carboxypeptidase n (kininase i) catalytic domain 0.8846 35 117
8a60-assembly1.cif.gz_A crystal structure of fhua in complex with the superinfection exclusion lipoprotein llp 0.879 151 803
3qlb-assembly1.cif.gz_A enantiopyochelin outer membrane tonb-dependent transporter from pseudomonas fluorescens bound to the ferri-enantiopyochelin 0.8739 154 803
ID Description Score Start End Superfamily
af_P15087_375_469_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.9227 41 119 2.60.40.1120
af_E7FFQ7_314_405_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.9154 41 117 2.60.40.1120
af_Q9JHW1_1212_1304_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.9118 41 122 2.60.40.1120
af_E7FFQ7_717_794_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.904 42 117 2.60.40.1120
af_F1RAC0_1040_1118_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.9026 41 117 2.60.40.1120
ID Description Score Start End GO Terms
AF-A0A5B8VLT1-F1-model_v4 TonB-dependent receptor-like beta-barrel domain-containing protein 0.9459 296 803 GO:0009279
GO:0015344
AF-A0A4Q3HG35-F1-model_v4 deleted 0.9416 160 803
AF-A0A5B8VLT1-F1-model_v4 TonB-dependent receptor-like beta-barrel domain-containing protein 0.9403 296 803 GO:0009279
GO:0015344
AF-A0A4Q3HG35-F1-model_v4 deleted 0.9387 160 803
AF-S6U6W8-F1-model_v4 TonB-dependent siderophore receptor 0.9258 213 340 GO:0009279
GO:0015344

Feature Viewer

pLDDT pTM Quality
79.27 0.74 High
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Predicted Structure (AlphaFold2)

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