F191811

General Info

Members Datasets Scaffolds Average Seq Length
144 111 78 172

Family's Representative Sequence

Representative Sequence 3300021327|Ga0214543_1008419|Ga0214543_100841917
Length 188
Sequence MTIPFIAAALRRRRNRGLLFGFATITMALLGTISVAWFGGYRINLTPSERLGLWRIIELDRPAAAGDLVLSCPPQTSAMREAKMRGYLRAGLCPGGIAPLIKTIIAVAGQRVAIGIGVSIDGHPVRFSALQHRDGKGRPLTPFGGGIVPAGYVFLHSPFVGSYDSRYFGPIPAAGILGLAHEVLTYAP

Samples

Sample ID Description Type Environment
1 2510917026 Rhizobium sp. CF80 Isolate Rhizosphere
2 2513237084 Rhizobium leguminosarum bv. viciae UPM1131 Isolate Nodule
3 2513237085 Rhizobium leguminosarum bv. viciae UPM1137 Isolate Nodule
4 2513237088 Rhizobium mesoamericanum STM6155 Isolate Nodule
5 2513237140 Sinorhizobium meliloti GVPV12 Isolate Nodule
6 2515075009 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
7 2515154107 Sinorhizobium meliloti 4H41 Isolate Nodule
8 2515154113 Rhizobium ruizarguesonis Vc2 Isolate Nodule
9 2524023209 Rhizobium leucaenae USDA 9039 Isolate Nodule
10 2558860100 Sinorhizobium sp. PC2 Isolate Nodule
11 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
12 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
13 2643221557 Ensifer sp. Root558 Isolate Unclassified
14 2643221582 Rhizobium sp. Root651 Isolate Unclassified
15 2643221626 Ensifer sp. Root31 Isolate Unclassified
16 2724679232 Rhizobium leguminosarum Vaf12 Isolate Unclassified
17 2751185821 Ensifer shofinae CCBAU 251167 Isolate Unclassified
18 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
19 2791355094 Sinorhizobium sp. BJ1 Isolate Nodule
20 2791355256 Rhizobium sp. M10 Isolate Nodule
21 2791355263 Rhizobium chutanense C5 Isolate Nodule
22 2791355266 Rhizobium sp. L43 Isolate Nodule
23 2802429605 Rhizobium sophoriradicis L101 Isolate Nodule
24 2802429606 Rhizobium sophoriradicis JJW1 Isolate Nodule
25 2802429633 Rhizobium anhuiense J3 Isolate Nodule
26 2802429636 Rhizobium anhuiense JX3 Isolate Nodule
27 2802429637 Rhizobium anhuiense C15 Isolate Nodule
28 2818991448 Rhizobium miluonense 1234 Isolate Unclassified
29 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
30 2838074704 Sinorhizobium terangae SEMIA 6460 Isolate Unclassified
31 2838686498 Rhizobium leguminosarum SEMIA 416 Isolate Nodule
32 2841851746 Rhizobium leguminosarum SEMIA 498 Isolate Nodule
33 2841864319 Rhizobium leguminosarum SEMIA 4052 Isolate Nodule
34 2842077413 Rhizobium leguminosarum SEMIA 422 Isolate Nodule
35 2842110456 Rhizobium esperanzae SEMIA 414 Isolate Nodule
36 2842198810 Rhizobium aethiopicum SEMIA 470 Isolate Nodule
37 2842271015 Rhizobium leguminosarum SEMIA 488 Isolate Nodule
38 2842298080 Rhizobium leucaenae SEMIA 492 Isolate Nodule
39 2842317721 Rhizobium etli SEMIA 4004 Isolate Nodule
40 2842395702 Rhizobium ecuadorense SEMIA 4029 Isolate Nodule
41 2842402390 Rhizobium lentis SEMIA 4033 Isolate Nodule
42 2842409023 Rhizobium lentis SEMIA 4034 Isolate Nodule
43 2842415677 Rhizobium lentis SEMIA 4036 Isolate Nodule
44 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
45 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
46 2842509118 Rhizobium paranaense SEMIA 4064 Isolate Nodule
47 2844454524 Rhizobium leguminosarum bv. viciae BIHB 1217 Isolate Nodule
48 2855872281 Sinorhizobium fredii PCH1 Isolate Nodule
49 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
50 2933586486 Rhizobium leguminosarum SEMIA 4039 Isolate Nodule
51 2936381700 Rhizobium chutanense C16 Isolate Unclassified
52 2941499720 Ensifer sp. 4252 Isolate Rhizosphere
53 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
54 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
55 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
56 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
57 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
58 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
59 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
60 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
61 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
62 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
63 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
64 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
65 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
66 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
67 3300012500 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610 Metagenome Rhizosphere
68 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
69 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
70 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
73 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
74 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
75 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
76 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
79 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
80 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
81 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
82 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
83 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
84 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
85 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
86 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
87 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
88 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
89 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
90 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
91 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
92 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
93 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
94 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
95 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
96 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
97 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
98 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
99 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
100 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
101 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
102 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
103 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
104 643692032 Sinorhizobium fredii NGR234 Isolate Nodule
105 8003570095 Agrobacterium rhizogenes GBBC3284 Isolate Unclassified
106 8005301065 Rhizobium bangladeshense 1017 Isolate Nodule
107 8005395548 Rhizobium sp. R339 Isolate Nodule
108 8005460587 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
109 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
110 8018176218 Rhizobium sp. N122 Isolate Nodule
111 8057874678 Rhizobium acaciae 1AS12 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 54.17
Metatranscriptomes 0
Isolates 45.83

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 27.78
Nodule 36.81
Rhizoplane 0
Rhizosphere 6.25
Stem 0
Stem Tuber 0
Unclassified 29.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10000885 3300003187 Bacteria 23587
2 JGI25153J46596_10000488 3300003215 Bacteria 25408
3 JGI25153J46596_10008230 3300003215 Bacteria 5013
4 rootH2_10133654 3300003320 Bacteria 3981
5 rootL2_10371793 3300003322 Bacteria 1311
6 rootH1_10054541 3300003323 Bacteria 18806
7 Ga0055526_1000143 3300003771 Bacteria 62679
8 Ga0055528_1000039 3300003790 Bacteria 112899
9 Ga0055540_1000381 3300003792 Bacteria 37015
10 Ga0055531_10000389 3300003794 Bacteria 42420
11 Ga0065165_1005303 3300005262 Bacteria 7340
12 Ga0065165_1008605 3300005262 Bacteria 4739
13 Ga0075365_10289619 3300006038 Bacteria 1152
14 Ga0075362_10115266 3300006177 Bacteria 1268
15 Ga0075367_10074211 3300006178 Bacteria 2051
16 Ga0075370_10256815 3300006353 Bacteria 1036
17 Ga0157314_1023714 3300012500 Bacteria 645
18 Ga0214543_1008419 3300021327 Bacteria 16880
19 Ga0209129_1000375 3300025258 Bacteria 36282
20 Ga0209673_1000126 3300025273 Bacteria 167949
21 Ga0209673_1000161 3300025273 Bacteria 142073
22 Ga0209676_1010783 3300025292 Bacteria 3759
23 Ga0209025_1001740 3300025294 Bacteria 26162
24 Ga0209025_1029860 3300025294 Bacteria 2625
25 Ga0209025_1111000 3300025294 Bacteria 843
26 Ga0209564_1000526 3300025295 Bacteria 62489
27 Ga0209564_1012466 3300025295 Bacteria 3707
28 Ga0209758_1001574 3300025297 Bacteria 26162
29 Ga0209758_1003198 3300025297 Bacteria 15283
30 Ga0209758_1004252 3300025297 Bacteria 12111
31 Ga0209256_1002666 3300025299 Bacteria 14003
32 Ga0209256_1005532 3300025299 Bacteria 7222
33 Ga0209051_1000132 3300025303 Bacteria 139145
34 Ga0209051_1007261 3300025303 Bacteria 6090
35 Ga0209051_1051375 3300025303 Bacteria 1371
36 Ga0209257_1000209 3300025304 Bacteria 141383
37 Ga0307515_10274431 3300028794 Bacteria 1402
38 Ga0307515_10291203 3300028794 Bacteria 1328
39 Ga0451833_0351940 3300041491 Bacteria 2392
40 Ga0451833_0859965 3300041491 Bacteria 1207
41 Ga0451835_0606237 3300041492 Bacteria 2590
42 Ga0451835_0668175 3300041492 Bacteria 1554
43 Ga0451835_1152940 3300041492 Bacteria 637
44 Ga0451837_1542482 3300041494 Bacteria 1288
45 Ga0451839_0109422 3300041496 Bacteria 1438
46 Ga0451839_0233572 3300041496 Bacteria 3571
47 Ga0451841_0614311 3300041498 Bacteria 1664
48 Ga0451845_0118091 3300041501 Bacteria 3200
49 Ga0451847_0175082 3300041503 Bacteria 1434
50 Ga0451847_0479507 3300041503 Bacteria 2203
51 Ga0451849_1110629 3300041505 Bacteria 2787
52 Ga0451851_0027103 3300041507 Bacteria 957
53 Ga0451851_0291274 3300041507 Bacteria 1205
54 Ga0451851_1251430 3300041507 Bacteria 872
55 Ga0451851_1338127 3300041507 Bacteria 2171
56 Ga0451843_0412301 3300041509 Bacteria 2486
57 Ga0451855_0077949 3300041511 Bacteria 2775
58 Ga0451855_0943309 3300041511 Bacteria 978
59 Ga0451855_1764452 3300041511 Bacteria 822
60 Ga0451855_1934074 3300041511 Bacteria 2206
61 Ga0451853_0901422 3300041512 Bacteria 2551
62 Ga0451853_1105536 3300041512 Bacteria 1194
63 Ga0451853_1412077 3300041512 Bacteria 2782
64 Ga0451853_2473247 3300041512 Bacteria 1698
65 Ga0439449_0002245 3300042007 Bacteria 7599
66 Ga0495687_052289 3300047443 Bacteria 1728
67 Ga0495686_0004913 3300047472 Bacteria 10773
68 Ga0495686_0105749 3300047472 Bacteria 1693
69 Ga0496121_0068909 3300048924 Bacteria 2859
70 nmdc:mga03n38_408131_c1 3300050490 Bacteria 749
71 nmdc:mga0yw44_250882_c1 3300050492 Bacteria 1178
72 nmdc:mga06z11_111001_c1 3300050494 Bacteria 1518
73 nmdc:mga07m45_168261_c1 3300050496 Bacteria 1273
74 Ga0500569_126916 3300053109 Bacteria 852
75 Ga0500618_002836 3300053125 Bacteria 6242
76 Ga0500658_0004211 3300053134 Bacteria 5400
77 Ga0500559_0151026 3300053136 Bacteria 1090
78 Ga0500604_0001870 3300053151 Bacteria 5841

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300028794 Ga0307515_10291203 Ga0307515_102912032 142
2 3300047472 Ga0495686_0004913 Ga0495686_0004913_5335_5871 146
3 3300006038 Ga0075365_10289619 Ga0075365_102896192 149
4 3300006177 Ga0075362_10115266 Ga0075362_101152662 149
5 3300006178 Ga0075367_10074211 Ga0075367_100742112 149
6 3300006353 Ga0075370_10256815 Ga0075370_102568151 149
7 3300047472 Ga0495686_0105749 Ga0495686_0105749_201_764 151
8 3300053136 Ga0500559_0151026 Ga0500559_0151026_276_812 151
9 3300005262 Ga0065165_1005303 Ga0065165_10053038 152
10 3300005262 Ga0065165_1008605 Ga0065165_10086053 152
11 3300025295 Ga0209564_1012466 Ga0209564_10124662 152
12 3300025299 Ga0209256_1005532 Ga0209256_10055323 152
13 3300028794 Ga0307515_10274431 Ga0307515_102744312 152
14 3300041492 Ga0451835_0668175 Ga0451835_0668175_423_986 152
15 3300041494 Ga0451837_1542482 Ga0451837_1542482_22_585 152
16 3300041505 Ga0451849_1110629 Ga0451849_1110629_517_1080 152
17 3300041507 Ga0451851_0291274 Ga0451851_0291274_459_1022 152
18 3300041507 Ga0451851_1251430 Ga0451851_1251430_262_825 152
19 3300041507 Ga0451851_1338127 Ga0451851_1338127_880_1443 152
20 3300041511 Ga0451855_0077949 Ga0451855_0077949_22_585 152
21 3300025294 Ga0209025_1111000 Ga0209025_11110001 153
22 3300041512 Ga0451853_0901422 Ga0451853_0901422_1875_2411 153
23 3300003790 Ga0055528_1000039 Ga0055528_100003911 155
24 3300025273 Ga0209673_1000161 Ga0209673_100016137 155
25 3300050490 nmdc:mga03n38_408131_c1 nmdc:mga03n38_408131_c1_38_574 156
26 3300012500 Ga0157314_1023714 Ga0157314_10237141 157
27 3300025297 Ga0209758_1004252 Ga0209758_10042522 157
28 3300041491 Ga0451833_0351940 Ga0451833_0351940_1476_2012 157
29 3300041492 Ga0451835_1152940 Ga0451835_1152940_41_604 157
30 3300041496 Ga0451839_0233572 Ga0451839_0233572_1376_1912 157
31 3300041503 Ga0451847_0175082 Ga0451847_0175082_351_914 157
32 3300041507 Ga0451851_0027103 Ga0451851_0027103_41_604 157
33 3300041509 Ga0451843_0412301 Ga0451843_0412301_1526_2062 157
34 3300041511 Ga0451855_1934074 Ga0451855_1934074_337_900 157
35 3300041512 Ga0451853_1412077 Ga0451853_1412077_1491_2054 157
36 3300050492 nmdc:mga0yw44_250882_c1 nmdc:mga0yw44_250882_c1_264_773 158
37 3300050494 nmdc:mga06z11_111001_c1 nmdc:mga06z11_111001_c1_239_748 158
38 3300050496 nmdc:mga07m45_168261_c1 nmdc:mga07m45_168261_c1_93_602 158
39 3300003320 rootH2_10133654 rootH2_101336546 160
40 3300003322 rootL2_10371793 rootL2_103717932 160
41 iso_pu_bacteria 2855872281 2855876189 160
42 3300048924 Ga0496121_0068909 Ga0496121_0068909_2175_2738 161
43 3300053125 Ga0500618_002836 Ga0500618_002836_2174_2737 161
44 iso_pu_bacteria 2513237084 2513573061 161
45 iso_pu_bacteria 2513237085 2513580858 161
46 iso_pu_bacteria 2515154113 2515635692 161
47 iso_pu_bacteria 2838686498 2838691075 161
48 iso_pu_bacteria 2842110456 2842117313 161
49 iso_pu_bacteria 2842271015 2842275550 161
50 iso_pu_bacteria 2844454524 2844461940 161
51 iso_pu_bacteria 2933586486 2933590005 161
52 3300003187 JGI25151J46595_10000885 JGI25151J46595_1000088517 165
53 3300003215 JGI25153J46596_10000488 JGI25153J46596_1000048820 165
54 3300003215 JGI25153J46596_10008230 JGI25153J46596_100082302 165
55 3300003323 rootH1_10054541 rootH1_100545412 165
56 3300003771 Ga0055526_1000143 Ga0055526_100014316 165
57 3300003792 Ga0055540_1000381 Ga0055540_100038111 165
58 3300003794 Ga0055531_10000389 Ga0055531_1000038917 165
59 3300021327 Ga0214543_1008419 Ga0214543_100841917 165
60 3300025258 Ga0209129_1000375 Ga0209129_100037524 165
61 3300025273 Ga0209673_1000126 Ga0209673_100012695 165
62 3300025292 Ga0209676_1010783 Ga0209676_10107832 165
63 3300025294 Ga0209025_1001740 Ga0209025_100174010 165
64 3300025294 Ga0209025_1029860 Ga0209025_10298601 165
65 3300025295 Ga0209564_1000526 Ga0209564_100052650 165
66 3300025297 Ga0209758_1001574 Ga0209758_100157410 165
67 3300025297 Ga0209758_1003198 Ga0209758_10031983 165
68 3300025299 Ga0209256_1002666 Ga0209256_100266614 165
69 3300025303 Ga0209051_1000132 Ga0209051_100013214 165
70 3300025303 Ga0209051_1007261 Ga0209051_10072612 165
71 3300025303 Ga0209051_1051375 Ga0209051_10513752 165
72 3300025304 Ga0209257_1000209 Ga0209257_1000209125 165
73 3300041491 Ga0451833_0859965 Ga0451833_0859965_187_723 165
74 3300041492 Ga0451835_0606237 Ga0451835_0606237_760_1296 165
75 3300041496 Ga0451839_0109422 Ga0451839_0109422_386_922 165
76 3300041498 Ga0451841_0614311 Ga0451841_0614311_612_1148 165
77 3300041501 Ga0451845_0118091 Ga0451845_0118091_553_1089 165
78 3300041503 Ga0451847_0479507 Ga0451847_0479507_1481_2017 165
79 3300041511 Ga0451855_0943309 Ga0451855_0943309_454_951 165
80 3300041511 Ga0451855_1764452 Ga0451855_1764452_187_723 165
81 3300041512 Ga0451853_1105536 Ga0451853_1105536_494_991 165
82 3300041512 Ga0451853_2473247 Ga0451853_2473247_553_1089 165
83 3300042007 Ga0439449_0002245 Ga0439449_0002245_5553_6092 165
84 3300047443 Ga0495687_052289 Ga0495687_052289_80_646 165
85 3300053109 Ga0500569_126916 Ga0500569_126916_16_513 165
86 3300053134 Ga0500658_0004211 Ga0500658_0004211_875_1441 165
87 3300053151 Ga0500604_0001870 Ga0500604_0001870_152_718 165
88 iso_pu_bacteria 2510917026 2511169739 165
89 iso_pu_bacteria 2513237088 2513598445 165
90 iso_pu_bacteria 2513237088 2513600483 165
91 iso_pu_bacteria 2513237140 2513881855 165
92 iso_pu_bacteria 2515075009 2515109900 165
93 iso_pu_bacteria 2515154107 2515611840 165
94 iso_pu_bacteria 2524023209 2524460907 165
95 iso_pu_bacteria 2524023209 2524462835 165
96 iso_pu_bacteria 2558860100 2558864257 165
97 iso_pu_bacteria 2558860100 2558866999 165
98 iso_pu_bacteria 2585427633 2585994079 165
99 iso_pu_bacteria 2615840626 2616310056 165
100 iso_pu_bacteria 2643221557 2643806751 165
101 iso_pu_bacteria 2643221582 2643918140 165
102 iso_pu_bacteria 2643221626 2644147405 165
103 iso_pu_bacteria 2724679232 2725949157 165
104 iso_pu_bacteria 2751185821 2753459395 165
105 iso_pu_bacteria 2775507266 2778180004 165
106 iso_pu_bacteria 2775507266 2778180310 165
107 iso_pu_bacteria 2791355094 2792642027 165
108 iso_pu_bacteria 2791355256 2793298057 165
109 iso_pu_bacteria 2791355263 2793343649 165
110 iso_pu_bacteria 2791355263 2793344633 165
111 iso_pu_bacteria 2791355266 2793363124 165
112 iso_pu_bacteria 2802429605 2805931168 165
113 iso_pu_bacteria 2802429606 2805936970 165
114 iso_pu_bacteria 2802429633 2806049557 165
115 iso_pu_bacteria 2802429636 2806071071 165
116 iso_pu_bacteria 2802429637 2806076147 165
117 iso_pu_bacteria 2818991448 2819612141 165
118 iso_pu_bacteria 2838029111 2838033473 165
119 iso_pu_bacteria 2838074704 2838080846 165
120 iso_pu_bacteria 2841851746 2841856391 165
121 iso_pu_bacteria 2841864319 2841870190 165
122 iso_pu_bacteria 2842077413 2842083243 165
123 iso_pu_bacteria 2842198810 2842202727 165
124 iso_pu_bacteria 2842298080 2842303830 165
125 iso_pu_bacteria 2842317721 2842324031 165
126 iso_pu_bacteria 2842395702 2842401987 165
127 iso_pu_bacteria 2842402390 2842408255 165
128 iso_pu_bacteria 2842409023 2842414558 165
129 iso_pu_bacteria 2842415677 2842421628 165
130 iso_pu_bacteria 2842475841 2842480257 165
131 iso_pu_bacteria 2842502639 2842507669 165
132 iso_pu_bacteria 2842509118 2842514829 165
133 iso_pu_bacteria 2926754445 2926759537 165
134 iso_pu_bacteria 2936381700 2936386403 165
135 iso_pu_bacteria 2941499720 2941503534 165
136 iso_pu_bacteria 643692032 643692066 165
137 iso_pu_bacteria 8003570095 8003574951 165
138 iso_pu_bacteria 8003570095 8003575126 165
139 iso_pu_bacteria 8005301065 8005303729 165
140 iso_pu_bacteria 8005395548 8005402163 165
141 iso_pu_bacteria 8005460587 8005465934 165
142 iso_pu_bacteria 8005645114 8005648504 165
143 iso_pu_bacteria 8018176218 8018179051 165
144 iso_pu_bacteria 8057874678 8057880266 165

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10502

Peptidase_S26

Signal peptidase, peptidase S26

15

185

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
4n31-assembly1.cif.gz_A structure and activity of streptococcus pyogenes sipa: a signal peptidase homologue essential for pilus polymerisation 0.6166 17 152
4k8w-assembly1.cif.gz_A-2 an arm-swapped dimer of the s. pyogenes pilin specific assembly factor sipa 0.5954 34 161
4n31-assembly1.cif.gz_B structure and activity of streptococcus pyogenes sipa: a signal peptidase homologue essential for pilus polymerisation 0.5717 17 152
4wvg-assembly1.cif.gz_A crystal structure of the type-i signal peptidase from staphylococcus aureus (spsb). 0.5499 22 152
4k8w-assembly1.cif.gz_A-2 an arm-swapped dimer of the s. pyogenes pilin specific assembly factor sipa 0.5475 34 161
ID Description Score Start End Superfamily
af_A0A5K1K8B7_164_341_2.10.109.10 Mainly Beta;Ribbon;Umud Fragment, subunit A;Umud Fragment, subunit A 0.5973 40 150 2.10.109.10
af_O04348_174_312_2.10.109.10 Mainly Beta;Ribbon;Umud Fragment, subunit A;Umud Fragment, subunit A 0.5969 18 152 2.10.109.10
4k8wA00 Mainly Beta;Ribbon;Umud Fragment, subunit A;Umud Fragment, subunit A 0.5954 34 161 2.10.109.10
af_Q2FZT7_22_151_2.10.109.10 Mainly Beta;Ribbon;Umud Fragment, subunit A;Umud Fragment, subunit A 0.5792 76 155 2.10.109.10
af_A0A368UMI2_206_316_2.10.109.10 Mainly Beta;Ribbon;Umud Fragment, subunit A;Umud Fragment, subunit A 0.5761 22 143 2.10.109.10
ID Description Score Start End GO Terms
AF-A0A4Q3HXH1-F1-model_v4 deleted 0.7853 2 75
AF-A0A4R3RGJ6-F1-model_v4 Conjugative transfer signal peptidase TraF 0.7564 2 107 GO:0004252
GO:0006465
AF-A0A4P7WH02-F1-model_v4 Conjugative transfer signal peptidase TraF 0.7552 2 154 GO:0004252
GO:0006465
GO:0016020
GO:0042597
AF-A0A2W5YPC4-F1-model_v4 Conjugative transfer signal peptidase TraF 0.7528 14 149 GO:0004252
GO:0006465
GO:0042597
AF-A0A7J5WF92-F1-model_v4 deleted 0.7467 4 152

Feature Viewer

pLDDT pTM Quality
64.14 0.63 Medium
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map