F191454

General Info

Members Datasets Scaffolds Average Seq Length
144 120 288 251

Family's Representative Sequence

Representative Sequence 3300006914|Ga0075436_100143389|Ga0075436_1001433892
Length 283
Sequence MTNETSKMKIVVIGGTGLIGSKLVKKLVEQGHHAVPASPNSGVNTLTGEGLAEVLKGAQVVVDVSNSPSFEEDAATDFFKTSTSNLLSYEAAAGVSHHVALSVVGTERLAESGGIGGYFRAKLAQEKLIKESSIPYSIVHATQFFEFVSKIADSGADGNTVRLSQVLIQPIAADDVAAAVGRVATRSPLNGTVAVAGPDQFRLNELVRLTLHALNDPREVIPDSQPRYFGADIDERTLVPGDDAQLGETHFDDWLSRSLTAAKNAQPPAVTAAAPTASAALKK

Samples

Sample ID Description Type Environment
1 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
6 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
7 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
8 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
9 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
10 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
15 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
16 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
17 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
18 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
26 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
28 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
29 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
30 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
31 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
32 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
35 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
36 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
37 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
52 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
53 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
54 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
55 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
56 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
57 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
58 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
59 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
60 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
61 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
62 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
63 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
64 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
65 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
66 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
67 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
68 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
69 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
70 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
71 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
72 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
73 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
74 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
75 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
76 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
77 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
78 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
79 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
80 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
81 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
82 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
93 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
94 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
95 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
96 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
97 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
98 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
99 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
100 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
101 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
102 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
103 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
104 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
105 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
106 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
107 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
108 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
109 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
110 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
111 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
112 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
113 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
114 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
115 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
116 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
117 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
118 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
119 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
120 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 88.89
Metatranscriptomes 0
Isolates 11.11

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.69
Nodule 1.39
Rhizoplane 0
Rhizosphere 86.81
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075436_100143389 3300006914 Bacteria 1679
2 JGI25407J50210_10010603 3300003373 Bacteria 2346
3 Ga0070658_10254507 3300005327 Bacteria 1490
4 Ga0068869_100380142 3300005334 Bacteria 1157
5 Ga0070705_100153200 3300005440 Bacteria 1532
6 Ga0070663_100003163 3300005455 Bacteria 9443
7 Ga0070663_100145509 3300005455 Bacteria 1813
8 Ga0070697_100006236 3300005536 Bacteria 9231
9 Ga0068853_100480441 3300005539 Bacteria 1171
10 Ga0070696_100352792 3300005546 Bacteria 1140
11 Ga0070665_100262101 3300005548 Bacteria 1729
12 Ga0068855_100063253 3300005563 Bacteria 4318
13 Ga0068854_100019236 3300005578 Bacteria 4599
14 Ga0068856_100009380 3300005614 Bacteria 9506
15 Ga0068856_100101972 3300005614 Bacteria 2863
16 Ga0068852_100016917 3300005616 Bacteria 5705
17 Ga0068851_10198287 3300005834 Bacteria 1119
18 Ga0081455_10020868 3300005937 Bacteria 6157
19 Ga0081455_10031532 3300005937 Bacteria 4792
20 Ga0081538_10000324 3300005981 Bacteria 54756
21 Ga0081540_1015209 3300005983 Bacteria 4881
22 Ga0075428_100853011 3300006844 Bacteria 967
23 Ga0075430_100216912 3300006846 Bacteria 1588
24 Ga0075431_100132407 3300006847 Bacteria 2571
25 Ga0075434_100205665 3300006871 Bacteria 1989
26 Ga0105240_10142363 3300009093 Bacteria 2866
27 Ga0111539_10019346 3300009094 Bacteria 8407
28 Ga0111539_10062837 3300009094 Bacteria 4394
29 Ga0111539_10726598 3300009094 Bacteria 1156
30 Ga0105245_10249993 3300009098 Bacteria 1722
31 Ga0114129_10613218 3300009147 Bacteria 1408
32 Ga0105243_10181820 3300009148 Bacteria 1829
33 Ga0105243_10302202 3300009148 Bacteria 1451
34 Ga0105241_10013954 3300009174 Bacteria 5889
35 Ga0105248_10320561 3300009177 Bacteria 1746
36 Ga0105248_11173165 3300009177 Bacteria 868
37 Ga0105238_10015579 3300009551 Bacteria 7698
38 Ga0157374_10073054 3300013296 Bacteria 3237
39 Ga0157378_10242055 3300013297 Bacteria 1724
40 Ga0157378_10603502 3300013297 Bacteria 1109
41 Ga0157378_11079619 3300013297 Bacteria 839
42 Ga0157372_10575776 3300013307 Bacteria 1312
43 Ga0183367_1012 3300015688 Bacteria 347438
44 Ga0213876_10048002 3300021384 Bacteria 2257
45 Ga0213875_10000679 3300021388 Bacteria 26696
46 Ga0207647_10000560 3300025904 Bacteria 29541
47 Ga0207705_10198693 3300025909 Bacteria 1519
48 Ga0207654_10050870 3300025911 Bacteria 2383
49 Ga0207695_10004230 3300025913 Bacteria 19734
50 Ga0207671_10000537 3300025914 Bacteria 51185
51 Ga0207693_10499094 3300025915 Bacteria 950
52 Ga0207694_10023368 3300025924 Bacteria 4692
53 Ga0207686_10203585 3300025934 Bacteria 1419
54 Ga0207709_10082544 3300025935 Bacteria 2075
55 Ga0207667_10058889 3300025949 Bacteria 4026
56 Ga0207640_10004492 3300025981 Bacteria 7568
57 Ga0207678_10000704 3300026067 Bacteria 30526
58 Ga0207678_10060327 3300026067 Bacteria 3263
59 Ga0207702_10027805 3300026078 Bacteria 4699
60 Ga0207698_10027344 3300026142 Bacteria 4048
61 Ga0207428_10024315 3300027907 Bacteria 5088
62 Ga0307408_100689100 3300031548 Bacteria 917
63 Ga0307508_10012056 3300031616 Bacteria 7908
64 Ga0307518_10126634 3300031838 Bacteria 1801
65 Ga0307410_10009979 3300031852 Bacteria 5356
66 Ga0307410_10417711 3300031852 Bacteria 1087
67 Ga0307407_10337136 3300031903 Bacteria 1063
68 Ga0307409_100176748 3300031995 Bacteria 1885
69 Ga0307415_100000178 3300032126 Bacteria 28406
70 Ga0307415_100052210 3300032126 Bacteria 2779
71 Ga0307507_10146509 3300033179 Bacteria 1792
72 Ga0307507_10185530 3300033179 Bacteria 1476
73 Ga0373925_0351553 3300037068 Bacteria 1197
74 Ga0395905_0192982 3300037471 Bacteria 1910
75 Ga0436364_1117297 3300037853 Bacteria 56782
76 Ga0436365_0040750 3300039437 Bacteria 4751
77 Ga0439436_0024441 3300041404 Bacteria 1783
78 Ga0439433_0023851 3300041999 Bacteria 1377
79 Ga0439442_000586 3300042002 Bacteria 7892
80 Ga0439449_0052378 3300042007 Bacteria 1509
81 Ga0450920_007989 3300042122 Bacteria 1926
82 Ga0466972_0031303 3300044658 Bacteria 2618
83 Ga0466957_0313888 3300044842 Bacteria 1056
84 Ga0466967_0075271 3300045976 Bacteria 3034
85 Ga0495606_0002644 3300046507 Bacteria 20452
86 Ga0495618_0230821 3300046514 Bacteria 1165
87 Ga0495665_0148005 3300046531 Bacteria 1226
88 Ga0495668_0000197 3300046616 Bacteria 88776
89 Ga0495625_0002368 3300046660 Bacteria 20514
90 Ga0495657_0141850 3300046675 Bacteria 1497
91 Ga0495613_0154232 3300046689 Bacteria 1637
92 Ga0495683_0024570 3300047323 Bacteria 3092
93 Ga0495683_0229055 3300047323 Bacteria 825
94 Ga0495675_0151862 3300047444 Bacteria 1431
95 Ga0495626_0000025 3300048091 Bacteria 209356
96 Ga0501031_0016109 3300049568 Bacteria 4854
97 Ga0501031_0148330 3300049568 Bacteria 1532
98 Ga0501032_0173433 3300049569 Bacteria 1413
99 Ga0501036_0018433 3300049572 Bacteria 5848
100 Ga0501036_0101548 3300049572 Bacteria 2433
101 Ga0501036_0441381 3300049572 Bacteria 1085
102 Ga0501038_0025229 3300049574 Bacteria 5299
103 Ga0501038_0041491 3300049574 Bacteria 4013
104 Ga0501039_0107874 3300049575 Bacteria 2176
105 Ga0501040_0042223 3300049576 Bacteria 3106
106 Ga0501041_0026352 3300049577 Bacteria 3497
107 Ga0501042_0009220 3300049578 Bacteria 6565
108 Ga0501046_0020284 3300049580 Bacteria 5500
109 Ga0501047_0044148 3300049581 Bacteria 4306
110 Ga0501071_0005053 3300049587 Bacteria 8440
111 Ga0501072_0079840 3300049588 Bacteria 2591
112 Ga0501074_0039574 3300049590 Bacteria 3415
113 Ga0501079_0065132 3300049741 Bacteria 2811
114 Ga0501081_0040735 3300049743 Bacteria 3180
115 Ga0501044_0005003 3300049823 Bacteria 14795
116 Ga0501044_0021004 3300049823 Bacteria 6971
117 Ga0501044_0073064 3300049823 Bacteria 3486
118 nmdc:mga05p37_358673_c1 3300050507 Bacteria 1714
119 nmdc:mga05p37_388629_c1 3300050507 Bacteria 1632
120 nmdc:mga08y16_302965_c1 3300050511 Bacteria 1647
121 nmdc:mga08y16_622647_c1 3300050511 Bacteria 1086
122 nmdc:mga0n895_80332_c1 3300050512 Bacteria 3249
123 nmdc:mga08x19_464276_c1 3300050514 Bacteria 892
124 nmdc:mga08x19_86164_c2 3300050514 Bacteria 938
125 nmdc:mga0a205_290605_c1 3300050515 Bacteria 1509
126 nmdc:mga0a205_65411_c2 3300050515 Bacteria 3134
127 Ga0500646_0000668 3300053090 Bacteria 9808
128 Ga0501084_0050277 3300054114 Bacteria 3489
129 2515856373 2515154155 Bacteria 7985436
130 2558907025 2558860112 Bacteria 9931328
131 2676478189 2675903058 Bacteria 6822861
132 2808915139 2808606375 Bacteria 9466072
133 2827631580 2827628540 Bacteria 6858585
134 2862392437 2862382967 Bacteria 10317375
135 2867314174 2867312974 Bacteria 7058875
136 2867321481 2867319477 Bacteria 7069771
137 2891396517 2891395885 Bacteria 9251614
138 2891555826 2891554331 Bacteria 8812224
139 2895439435 2895427314 Bacteria 13147766
140 2912715449 2912715099 Bacteria 9460473
141 2945944250 2945941187 Bacteria 4682474
142 2954389784 2954380949 Bacteria 10050426
143 8008560056 8008558824 Bacteria 10610750
144 8047715643 8047710418 Bacteria 11023148
145 Ga0075436_100143389
146 JGI25407J50210_10010603
147 Ga0070658_10254507
148 Ga0068869_100380142
149 Ga0070705_100153200
150 Ga0070663_100003163
151 Ga0070663_100145509
152 Ga0070697_100006236
153 Ga0068853_100480441
154 Ga0070696_100352792
155 Ga0070665_100262101
156 Ga0068855_100063253
157 Ga0068854_100019236
158 Ga0068856_100009380
159 Ga0068856_100101972
160 Ga0068852_100016917
161 Ga0068851_10198287
162 Ga0081455_10020868
163 Ga0081455_10031532
164 Ga0081538_10000324
165 Ga0081540_1015209
166 Ga0075428_100853011
167 Ga0075430_100216912
168 Ga0075431_100132407
169 Ga0075434_100205665
170 Ga0105240_10142363
171 Ga0111539_10019346
172 Ga0111539_10062837
173 Ga0111539_10726598
174 Ga0105245_10249993
175 Ga0114129_10613218
176 Ga0105243_10181820
177 Ga0105243_10302202
178 Ga0105241_10013954
179 Ga0105248_10320561
180 Ga0105248_11173165
181 Ga0105238_10015579
182 Ga0157374_10073054
183 Ga0157378_10242055
184 Ga0157378_10603502
185 Ga0157378_11079619
186 Ga0157372_10575776
187 Ga0183367_1012
188 Ga0213876_10048002
189 Ga0213875_10000679
190 Ga0207647_10000560
191 Ga0207705_10198693
192 Ga0207654_10050870
193 Ga0207695_10004230
194 Ga0207671_10000537
195 Ga0207693_10499094
196 Ga0207694_10023368
197 Ga0207686_10203585
198 Ga0207709_10082544
199 Ga0207667_10058889
200 Ga0207640_10004492
201 Ga0207678_10000704
202 Ga0207678_10060327
203 Ga0207702_10027805
204 Ga0207698_10027344
205 Ga0207428_10024315
206 Ga0307408_100689100
207 Ga0307508_10012056
208 Ga0307518_10126634
209 Ga0307410_10009979
210 Ga0307410_10417711
211 Ga0307407_10337136
212 Ga0307409_100176748
213 Ga0307415_100000178
214 Ga0307415_100052210
215 Ga0307507_10146509
216 Ga0307507_10185530
217 Ga0373925_0351553
218 Ga0395905_0192982
219 Ga0436364_1117297
220 Ga0436365_0040750
221 Ga0439436_0024441
222 Ga0439433_0023851
223 Ga0439442_000586
224 Ga0439449_0052378
225 Ga0450920_007989
226 Ga0466972_0031303
227 Ga0466957_0313888
228 Ga0466967_0075271
229 Ga0495606_0002644
230 Ga0495618_0230821
231 Ga0495665_0148005
232 Ga0495668_0000197
233 Ga0495625_0002368
234 Ga0495657_0141850
235 Ga0495613_0154232
236 Ga0495683_0024570
237 Ga0495683_0229055
238 Ga0495675_0151862
239 Ga0495626_0000025
240 Ga0501031_0016109
241 Ga0501031_0148330
242 Ga0501032_0173433
243 Ga0501036_0018433
244 Ga0501036_0101548
245 Ga0501036_0441381
246 Ga0501038_0025229
247 Ga0501038_0041491
248 Ga0501039_0107874
249 Ga0501040_0042223
250 Ga0501041_0026352
251 Ga0501042_0009220
252 Ga0501046_0020284
253 Ga0501047_0044148
254 Ga0501071_0005053
255 Ga0501072_0079840
256 Ga0501074_0039574
257 Ga0501079_0065132
258 Ga0501081_0040735
259 Ga0501044_0005003
260 Ga0501044_0021004
261 Ga0501044_0073064
262 nmdc:mga05p37_358673_c1
263 nmdc:mga05p37_388629_c1
264 nmdc:mga08y16_302965_c1
265 nmdc:mga08y16_622647_c1
266 nmdc:mga0n895_80332_c1
267 nmdc:mga08x19_464276_c1
268 nmdc:mga08x19_86164_c2
269 nmdc:mga0a205_290605_c1
270 nmdc:mga0a205_65411_c2
271 Ga0500646_0000668
272 Ga0501084_0050277
273 2515856373
274 2558907025
275 2676478189
276 2808915139
277 2827631580
278 2862392437
279 2867314174
280 2867321481
281 2891396517
282 2891555826
283 2895439435
284 2912715449
285 2945944250
286 2954389784
287 8008560056
288 8047715643

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13460

NAD_binding_10

NAD(P)H-binding

14

186

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
6jkg-assembly1.cif.gz_B the nad+-free form of human nsdhl 0.8603 2 129
6jkh-assembly1.cif.gz_B the nad+-bound form of human nsdhl 0.8509 2 129
6jkg-assembly1.cif.gz_A the nad+-free form of human nsdhl 0.8367 2 130
3wj7-assembly1.cif.gz_C crystal structure of gox2253 0.8235 3 211
6jkh-assembly1.cif.gz_A the nad+-bound form of human nsdhl 0.8085 2 130
ID Description Score Start End Superfamily
af_A0A0N7KJR7_8_180_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8929 2 99 3.40.50.720
2gn9B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8458 1 129 3.40.50.720
af_Q10JX4_15_266_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8392 2 134 3.40.50.720
af_A0A1D6GEP1_267_439_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8369 2 99 3.40.50.720
af_I1KG15_128_276_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8315 1 86 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A4V1T6H8-F1-model_v4 deleted 1.002 1 91
AF-A0A2V6I120-F1-model_v4 NmrA family transcriptional regulator 1.001 1 120
AF-H0G2Z3-F1-model_v4 NAD-dependent epimerase/dehydratase domain-containing protein 1.001 1 112
AF-A0A2V7CXT5-F1-model_v4 NmrA family transcriptional regulator 1 1 129
AF-A0A3B4CG98-F1-model_v4 deleted 0.9997 1 118

Map