F190915

General Info

Members Datasets Scaffolds Average Seq Length
144 102 286 1191

Family's Representative Sequence

Representative Sequence 3300005367|Ga0070667_100034556|Ga0070667_1000345561
Length 1244
Sequence MDVSLDLANKFEKGRKKMSKKSMLLFSAVSFAQEITGSLTGTVRDANGAAVPNATVTITDPSKNNIVVRTITTNSDGEYSAPNLATSTFSVTVEAPNFKKAVSTGVKIDVGAHRTLDIQLAAGKIDETVTVQADAVAVELATPTAGTVINGDQVRELSLNNRNWVQLVAIAPGVSNDLSDQVYVGTTNPEGQANTINIAVNGGRSSQNTFTVDGADVTDRGSNITIQAYPSVDSIGEFKVLRSLYPAESGRSGGGQVNIVTRSGGNKFHGSAFEFIRNEAFNANNFLTNSITGNPPFGRNCLASSGLPNSDPACKAKRAPFRYNNYGWTIGGPVYFLRFGERDPGDSMFAVVPKTFFFFAEEWRKDNRFSAAINTTVPDASLRAGVFPVDVCIARNNVPAENCSVGNPGRLAANSPIPASMLSPAAVSYLTNVYNHLPLPNNAGVSIYTLTTAIHNVSDFRQEILKIDHSFSDKLSGYYRYERDEIPTIDGNALFSSGSNLPDVSTTSTNSPGRTHTVQMTYVAKSNLIIEGRYNYGYGAILSENIGTLSLNNFVAPITLPFANQRDRNPTITGNGFNGLTSFGPYDNFSWKQNVTGSATWISGGHTLKFGIVDSWYRKNENALAGNNEGNFNTFTSTVASGVTNSTTNQNLARWANFLVGNVAPGGFNQASFDYTADLRQKTIEGYAQDEWKFRPSLTLYYGVRYSYFGSPWDKNGRLSNFDPSLWTAANAPQVQGNGVRVFGAAGVANGNWCNGVIVNSQNVTTGPAVLNCTPTVSPWGKYVIDVGKKDFAPRVGLAWDPFGKGRTSVRMGYGIYHEQVLNGTFEQNIGVNPPYQVTANVSGSTTRLDAPGGGAVLSTLVQSLRAVQTDWHTPYMQHWSLDFQHQIDKSTIVTVGYFGSKGTHMIGVTELNDIKPGVALNSMCAPGTGYYAQTPAPTLVACQNPGYVFRNAGSSTTIVPENPNVLAGVQFADVLILDQIRPYKGFRSIAIIQPRYNSSYHSLQVSAQRRFSGASQINLAYTWSKNLTDNQTDRSTAPQNTYDAGAEKSRATLDRRHVFNVNYVYELPFYKNRHDLAGQLLGGWQASGIVTYQTGLPFTPITSSFDPAGMGLINANPTARPILLCDPNANATHTQARYFDISCFQANPSNTDNTRLLGFKNVPGNAGRGIIQGPPTFRVDFTMSKNFRFGESARLQLRAEAFNIFNHTNMRSFSSLNNTSTSFGVIGTVRDPRTMQFGAKISF

Samples

Sample ID Description Type Environment
1 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
2 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
3 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
36 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
59 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
90 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
91 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
92 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
93 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
94 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
95 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
96 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
97 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
98 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
99 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
100 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
101 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
102 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 97.92
Stem 0
Stem Tuber 0
Unclassified 4.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070667_100034556 3300005367 Bacteria 4230
2 JGI24748J21848_1000009 3300002074 Bacteria 178563
3 JGI24034J26672_10000002 3300002239 Bacteria 925353
4 rootL2_10136635 3300003322 Unclassified 4555
5 Ga0070676_10012620 3300005328 Bacteria 4618
6 Ga0068869_100017551 3300005334 Bacteria 4853
7 Ga0070682_100000318 3300005337 Bacteria 33230
8 Ga0070689_100002457 3300005340 Bacteria 12116
9 Ga0070689_100017260 3300005340 Bacteria 5296
10 Ga0070669_100001546 3300005353 Bacteria 16642
11 Ga0070671_100014477 3300005355 Bacteria 6375
12 Ga0070659_100005691 3300005366 Bacteria 8968
13 Ga0070703_10000229 3300005406 Bacteria 27017
14 Ga0070694_100000691 3300005444 Bacteria 18790
15 Ga0070678_100010306 3300005456 Bacteria 5702
16 Ga0070681_10001488 3300005458 Bacteria 20717
17 Ga0070681_10011271 3300005458 Bacteria 8842
18 Ga0068867_100020003 3300005459 Bacteria 4770
19 Ga0070706_100000224 3300005467 Bacteria 69180
20 Ga0070706_100025155 3300005467 Bacteria 5480
21 Ga0070698_100000066 3300005471 Bacteria 77789
22 Ga0070698_100000880 3300005471 Bacteria 33010
23 Ga0070698_100007259 3300005471 Bacteria 12005
24 Ga0070679_100002658 3300005530 Bacteria 16265
25 Ga0070679_100017197 3300005530 Bacteria 6996
26 Ga0070697_100001476 3300005536 Bacteria 17863
27 Ga0070686_100007837 3300005544 Bacteria 5969
28 Ga0070704_100011295 3300005549 Bacteria 5471
29 Ga0070664_100007636 3300005564 Bacteria 8734
30 Ga0068857_100003338 3300005577 Bacteria 13362
31 Ga0068854_100019989 3300005578 Bacteria 4521
32 Ga0068856_100002835 3300005614 Bacteria 17754
33 Ga0068859_100005580 3300005617 Bacteria 12815
34 Ga0068859_100032741 3300005617 Bacteria 5221
35 Ga0068864_100030534 3300005618 Unclassified 4568
36 Ga0068864_100032673 3300005618 Bacteria 4422
37 Ga0068864_100034097 3300005618 Bacteria 4328
38 Ga0068863_100051275 3300005841 Bacteria 3911
39 Ga0068858_100000124 3300005842 Bacteria 80085
40 Ga0068858_100052993 3300005842 Bacteria 3754
41 Ga0068860_100011901 3300005843 Bacteria 8575
42 Ga0068860_100029324 3300005843 Bacteria 5292
43 Ga0068860_100039139 3300005843 Bacteria 4535
44 Ga0068862_100012716 3300005844 Bacteria 6966
45 Ga0081455_10016918 3300005937 Bacteria 7010
46 Ga0081539_10001006 3300005985 Bacteria 52064
47 Ga0070715_10000009 3300006163 Bacteria 187315
48 Ga0070716_100000005 3300006173 Bacteria 273485
49 Ga0097621_100005139 3300006237 Bacteria 9197
50 Ga0097621_100036471 3300006237 Bacteria 3934
51 Ga0068871_100014385 3300006358 Bacteria 5900
52 Ga0075433_10030681 3300006852 Bacteria 4588
53 Ga0075433_10032472 3300006852 Bacteria 4472
54 Ga0075434_100028042 3300006871 Bacteria 5530
55 Ga0075434_100030853 3300006871 Bacteria 5282
56 Ga0097620_100005580 3300006931 Bacteria 12815
57 Ga0097620_100032741 3300006931 Bacteria 5221
58 Ga0075435_100007290 3300007076 Bacteria 7873
59 Ga0105247_10000031 3300009101 Bacteria 185793
60 Ga0105247_10017332 3300009101 Unclassified 4324
61 Ga0114129_10038373 3300009147 Bacteria 6758
62 Ga0105243_10000024 3300009148 Bacteria 197391
63 Ga0105242_10000202 3300009176 Bacteria 46326
64 Ga0105242_10002495 3300009176 Bacteria 14431
65 Ga0105248_10007412 3300009177 Bacteria 12039
66 Ga0105248_10056759 3300009177 Bacteria 4393
67 Ga0105237_10037682 3300009545 Bacteria 4886
68 Ga0105249_10013206 3300009553 Bacteria 7288
69 Ga0105249_10014304 3300009553 Bacteria 7017
70 Ga0105249_10024315 3300009553 Bacteria 5444
71 Ga0105249_10035374 3300009553 Unclassified 4531
72 Ga0157373_10001414 3300013100 Bacteria 18327
73 Ga0157373_10014779 3300013100 Bacteria 5718
74 Ga0157374_10039398 3300013296 Bacteria 4349
75 Ga0157378_10036501 3300013297 Unclassified 4349
76 Ga0163162_10025480 3300013306 Bacteria 5844
77 Ga0157372_10035113 3300013307 Bacteria 5517
78 Ga0157372_10038763 3300013307 Bacteria 5259
79 Ga0157372_10041250 3300013307 Bacteria 5102
80 Ga0157375_10018309 3300013308 Bacteria 6350
81 Ga0163163_10005667 3300014325 Bacteria 10831
82 Ga0163163_10017012 3300014325 Bacteria 6773
83 Ga0163163_10021475 3300014325 Bacteria 6093
84 Ga0157376_10035264 3300014969 Bacteria 4046
85 Ga0213876_10000277 3300021384 Bacteria 47161
86 Ga0207653_10000249 3300025885 Bacteria 34758
87 Ga0207710_10000003 3300025900 Bacteria 1071597
88 Ga0207685_10000014 3300025905 Bacteria 180422
89 Ga0207684_10000310 3300025910 Bacteria 69199
90 Ga0207684_10004302 3300025910 Bacteria 13482
91 Ga0207707_10025252 3300025912 Bacteria 5197
92 Ga0207662_10005069 3300025918 Bacteria 6981
93 Ga0207694_10006574 3300025924 Bacteria 8835
94 Ga0207650_10009338 3300025925 Bacteria 6704
95 Ga0207644_10000579 3300025931 Bacteria 23521
96 Ga0207686_10000011 3300025934 Bacteria 216046
97 Ga0207686_10000186 3300025934 Bacteria 48055
98 Ga0207709_10000042 3300025935 Bacteria 254145
99 Ga0207670_10000738 3300025936 Bacteria 17203
100 Ga0207665_10000017 3300025939 Bacteria 130585
101 Ga0207711_10013209 3300025941 Bacteria 6859
102 Ga0207711_10020433 3300025941 Bacteria 5520
103 Ga0207689_10013280 3300025942 Bacteria 7025
104 Ga0207679_10014318 3300025945 Bacteria 5212
105 Ga0207667_10019532 3300025949 Bacteria 7561
106 Ga0207651_10007409 3300025960 Bacteria 5844
107 Ga0207712_10006127 3300025961 Bacteria 7582
108 Ga0207712_10009795 3300025961 Bacteria 6072
109 Ga0207658_10012195 3300025986 Bacteria 5865
110 Ga0207703_10000056 3300026035 Bacteria 142103
111 Ga0207703_10036455 3300026035 Bacteria 3915
112 Ga0207708_10005685 3300026075 Bacteria 9215
113 Ga0207708_10016150 3300026075 Bacteria 5609
114 Ga0207702_10027851 3300026078 Bacteria 4694
115 Ga0207641_10018821 3300026088 Bacteria 5663
116 Ga0207641_10025220 3300026088 Unclassified 4903
117 Ga0207641_10051680 3300026088 Bacteria 3480
118 Ga0207648_10036899 3300026089 Bacteria 4305
119 Ga0207648_10050948 3300026089 Bacteria 3619
120 Ga0207676_10012138 3300026095 Bacteria 6166
121 Ga0207676_10033504 3300026095 Bacteria 3882
122 Ga0207674_10000473 3300026116 Bacteria 52784
123 Ga0207674_10004410 3300026116 Bacteria 16957
124 Ga0207675_100019187 3300026118 Bacteria 6381
125 Ga0268265_10019020 3300028380 Bacteria 4769
126 Ga0268265_10023310 3300028380 Bacteria 4362
127 Ga0268264_10003747 3300028381 Bacteria 13050
128 Ga0268264_10025711 3300028381 Bacteria 4808
129 Ga0307407_10005835 3300031903 Bacteria 5395
130 Ga0307409_100000203 3300031995 Bacteria 23418
131 Ga0307416_100001448 3300032002 Bacteria 12903
132 Ga0307415_100005281 3300032126 Bacteria 6839
133 Ga0436365_0557003 3300039437 Bacteria 48655
134 Ga0495663_0000308 3300046525 Bacteria 18401
135 Ga0495621_0004862 3300046539 Unclassified 3813
136 Ga0495668_0000629 3300046616 Bacteria 42412
137 Ga0501235_000535 3300049669 Bacteria 7588
138 nmdc:mga05p37_59707_c1 3300050507 Bacteria 4696
139 nmdc:mga08y16_34396_c1 3300050511 Bacteria 5323
140 nmdc:mga0n895_10608_c1 3300050512 Bacteria 8155
141 nmdc:mga0n895_20294_c1 3300050512 Bacteria 6194
142 nmdc:mga0rr50_25257_c1 3300050513 Bacteria 4128
143 nmdc:mga0a205_38919_c1 3300050515 Bacteria 4576
144 Ga0070667_100034556
145 JGI24748J21848_1000009
146 JGI24034J26672_10000002
147 rootL2_10136635
148 Ga0070676_10012620
149 Ga0068869_100017551
150 Ga0070682_100000318
151 Ga0070689_100002457
152 Ga0070689_100017260
153 Ga0070669_100001546
154 Ga0070671_100014477
155 Ga0070659_100005691
156 Ga0070703_10000229
157 Ga0070694_100000691
158 Ga0070678_100010306
159 Ga0070681_10001488
160 Ga0070681_10011271
161 Ga0068867_100020003
162 Ga0070706_100000224
163 Ga0070706_100025155
164 Ga0070698_100000066
165 Ga0070698_100000880
166 Ga0070698_100007259
167 Ga0070679_100002658
168 Ga0070679_100017197
169 Ga0070697_100001476
170 Ga0070686_100007837
171 Ga0070704_100011295
172 Ga0070664_100007636
173 Ga0068857_100003338
174 Ga0068854_100019989
175 Ga0068856_100002835
176 Ga0068859_100005580
177 Ga0068859_100032741
178 Ga0068864_100030534
179 Ga0068864_100032673
180 Ga0068864_100034097
181 Ga0068863_100051275
182 Ga0068858_100000124
183 Ga0068858_100052993
184 Ga0068860_100011901
185 Ga0068860_100029324
186 Ga0068860_100039139
187 Ga0068862_100012716
188 Ga0081455_10016918
189 Ga0081539_10001006
190 Ga0070715_10000009
191 Ga0070716_100000005
192 Ga0097621_100005139
193 Ga0097621_100036471
194 Ga0068871_100014385
195 Ga0075433_10030681
196 Ga0075433_10032472
197 Ga0075434_100028042
198 Ga0075434_100030853
199 Ga0097620_100005580
200 Ga0097620_100032741
201 Ga0075435_100007290
202 Ga0105247_10000031
203 Ga0105247_10017332
204 Ga0114129_10038373
205 Ga0105243_10000024
206 Ga0105242_10000202
207 Ga0105242_10002495
208 Ga0105248_10007412
209 Ga0105248_10056759
210 Ga0105237_10037682
211 Ga0105249_10013206
212 Ga0105249_10014304
213 Ga0105249_10024315
214 Ga0105249_10035374
215 Ga0157373_10001414
216 Ga0157373_10014779
217 Ga0157374_10039398
218 Ga0157378_10036501
219 Ga0163162_10025480
220 Ga0157372_10035113
221 Ga0157372_10038763
222 Ga0157372_10041250
223 Ga0157375_10018309
224 Ga0163163_10005667
225 Ga0163163_10017012
226 Ga0163163_10021475
227 Ga0157376_10035264
228 Ga0213876_10000277
229 Ga0207653_10000249
230 Ga0207710_10000003
231 Ga0207685_10000014
232 Ga0207684_10000310
233 Ga0207684_10004302
234 Ga0207707_10025252
235 Ga0207662_10005069
236 Ga0207694_10006574
237 Ga0207650_10009338
238 Ga0207644_10000579
239 Ga0207686_10000011
240 Ga0207686_10000186
241 Ga0207709_10000042
242 Ga0207670_10000738
243 Ga0207665_10000017
244 Ga0207711_10013209
245 Ga0207711_10020433
246 Ga0207689_10013280
247 Ga0207679_10014318
248 Ga0207667_10019532
249 Ga0207651_10007409
250 Ga0207712_10006127
251 Ga0207712_10009795
252 Ga0207658_10012195
253 Ga0207703_10000056
254 Ga0207703_10036455
255 Ga0207708_10005685
256 Ga0207708_10016150
257 Ga0207702_10027851
258 Ga0207641_10018821
259 Ga0207641_10025220
260 Ga0207641_10051680
261 Ga0207648_10036899
262 Ga0207648_10050948
263 Ga0207676_10012138
264 Ga0207676_10033504
265 Ga0207674_10000473
266 Ga0207674_10004410
267 Ga0207675_100019187
268 Ga0268265_10019020
269 Ga0268265_10023310
270 Ga0268264_10003747
271 Ga0268264_10025711
272 Ga0307407_10005835
273 Ga0307409_100000203
274 Ga0307416_100001448
275 Ga0307415_100005281
276 Ga0436365_0557003
277 Ga0495663_0000308
278 Ga0495621_0004862
279 Ga0495668_0000629
280 Ga0501235_000535
281 nmdc:mga05p37_59707_c1
282 nmdc:mga08y16_34396_c1
283 nmdc:mga0n895_10608_c1
284 nmdc:mga0n895_20294_c1
285 nmdc:mga0rr50_25257_c1
286 nmdc:mga0a205_38919_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13620

CarboxypepD_reg

Carboxypeptidase regulatory-like domain

38

121

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5aq0-assembly1.cif.gz_A the structure of the transthyretin-like domain of the first catalytic domain of the human carboxypeptidase d 0.9048 30 116
5aq0-assembly1.cif.gz_A the structure of the transthyretin-like domain of the first catalytic domain of the human carboxypeptidase d 0.8945 30 116
4v4c-assembly3.cif.gz_F crystal structure of pyrogallol-phloroglucinol transhydroxylase from pelobacter acidigallici 0.8929 31 114
3is0-assembly1.cif.gz_X crystal structure of functional region of uafa from staphylococcus saprophyticus in the presence of cholesterol 0.8207 31 116
4mrb-assembly1.cif.gz_B-2 wild type human transthyretin ph 7.5 0.8056 33 86
ID Description Score Start End Superfamily
af_E7FFQ7_314_405_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.9315 33 116 2.60.40.1120
af_O75976_383_462_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.9078 33 116 2.60.40.1120
af_O75976_383_462_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8866 33 116 2.60.40.1120
af_I1NBD7_943_1024_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8663 33 88 2.60.40.1120
af_O54858_508_590_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8301 33 118 2.60.40.1120
ID Description Score Start End GO Terms
AF-A0A355UVY8-F1-model_v4 Carboxypeptidase regulatory-like domain-containing protein 0.9598 31 116
AF-A0A7W0UYX8-F1-model_v4 Carboxypeptidase regulatory-like domain-containing protein 0.9523 26 126 GO:0004180
AF-A0A4R4PWR3-F1-model_v4 Carboxypeptidase regulatory-like domain-containing protein 0.9224 32 115 GO:0004180
AF-Q1IVP2-F1-model_v4 Carboxypeptidase regulatory-like domain-containing protein 0.9125 32 117
AF-A0A2D8M4D1-F1-model_v4 Carboxypeptidase regulatory-like domain-containing protein 0.9047 31 128 GO:0016020

Map