F183116

General Info

Members Datasets Scaffolds Average Seq Length
141 117 141 301

Family's Representative Sequence

Representative Sequence 3300031727|Ga0316576_10177695|Ga0316576_101776952
Length 297
Sequence MRYAYAGTAPFAELVLSGLAAKGHTPVVLITNPDRPRGRHGTPQPPHITELAERLGVPVLQPERLSAPAALDALLTFAPDVLVVCAYGQIVTQDVLDAVETVVVHPSLAPHWRGAAPVERALMAGETELGVCTLKMTAGIDEGPVGDARTVHVPRDADAGAAYELLAPAAVEGVLATLRAIADGSVAWRPQTGRATYAEKIGPPDREIDWSRPATRIADQVRALSPHIGAVTELAGRSTRIWRARPGDGPMPESGPERLVIATGEGWLEVLELQQEGRTRMAAAEFLRGAGRGLLAP

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
9 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
14 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
20 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
21 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
22 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
23 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
24 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
25 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
26 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
27 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
28 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
29 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
30 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
52 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
53 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
54 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
55 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
56 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
57 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
58 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
59 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
60 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
61 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
62 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
63 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
64 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
65 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
66 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
67 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
68 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
69 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
70 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
71 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
72 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
73 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
74 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
75 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
76 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
77 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
78 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
79 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
80 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
81 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
82 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
83 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
84 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
85 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
86 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
87 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
88 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
89 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
90 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
91 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
92 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
93 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
94 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
95 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
96 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
97 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
98 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
99 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
104 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
105 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
106 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
107 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
108 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
109 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
110 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
111 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
112 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
113 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
114 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
115 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
116 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
117 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.42
Nodule 0
Rhizoplane 15.6
Rhizosphere 80.85
Stem 0
Stem Tuber 0
Unclassified 2.13

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10009790 3300001979 Bacteria 3730
2 Ga0070680_100424702 3300005336 Bacteria 1134
3 Ga0070682_100000017 3300005337 Bacteria 235228
4 Ga0068868_100000026 3300005338 Bacteria 81980
5 Ga0070689_100176971 3300005340 Bacteria 1731
6 Ga0070659_100169646 3300005366 Bacteria 1787
7 Ga0070711_100006511 3300005439 Bacteria 7043
8 Ga0070700_100067868 3300005441 Bacteria 2266
9 Ga0070662_100000009 3300005457 Bacteria 142979
10 Ga0070681_10009093 3300005458 Bacteria 9762
11 Ga0070679_100000244 3300005530 Bacteria 45433
12 Ga0070684_100330914 3300005535 Bacteria 1400
13 Ga0068853_100034449 3300005539 Bacteria 4298
14 Ga0070686_100031140 3300005544 Bacteria 3259
15 Ga0070665_100000040 3300005548 Bacteria 305480
16 Ga0068856_100004075 3300005614 Bacteria 14618
17 Ga0068866_10000340 3300005718 Bacteria 22024
18 Ga0068858_100001002 3300005842 Bacteria 29191
19 Ga0068858_100019069 3300005842 Bacteria 6417
20 Ga0075433_10032004 3300006852 Bacteria 4502
21 Ga0105245_10002314 3300009098 Bacteria 17238
22 Ga0105247_10001002 3300009101 Bacteria 21329
23 Ga0105242_10013906 3300009176 Bacteria 6228
24 Ga0105238_10000009 3300009551 Bacteria 288729
25 Ga0105249_10000050 3300009553 Bacteria 169617
26 Ga0105249_10336975 3300009553 Bacteria 1524
27 Ga0157370_10054861 3300013104 Bacteria 3799
28 Ga0157374_10000678 3300013296 Bacteria 29993
29 Ga0157375_10000236 3300013308 Bacteria 51196
30 Ga0157375_10052967 3300013308 Bacteria 3991
31 Ga0157375_10373693 3300013308 Bacteria 1592
32 Ga0157379_10039456 3300014968 Bacteria 4213
33 Ga0163161_10000021 3300017792 Bacteria 208779
34 Ga0207642_10003479 3300025899 Bacteria 4970
35 Ga0207710_10000461 3300025900 Bacteria 26087
36 Ga0207707_10075862 3300025912 Bacteria 2934
37 Ga0207663_10026169 3300025916 Bacteria 3383
38 Ga0207652_10000395 3300025921 Bacteria 45460
39 Ga0207694_10000004 3300025924 Bacteria 967075
40 Ga0207687_10000013 3300025927 Bacteria 299826
41 Ga0207687_10000695 3300025927 Bacteria 22726
42 Ga0207690_10110508 3300025932 Bacteria 1979
43 Ga0207706_10000001 3300025933 Bacteria 423014
44 Ga0207686_10013646 3300025934 Bacteria 4500
45 Ga0207670_10144082 3300025936 Bacteria 1760
46 Ga0207669_10000006 3300025937 Bacteria 176348
47 Ga0207712_10000019 3300025961 Bacteria 317060
48 Ga0207712_10237172 3300025961 Bacteria 1467
49 Ga0207677_10000106 3300026023 Bacteria 68108
50 Ga0207703_10000078 3300026035 Bacteria 115634
51 Ga0207703_10000257 3300026035 Bacteria 59688
52 Ga0207703_10359591 3300026035 Bacteria 1342
53 Ga0207639_10024239 3300026041 Bacteria 4388
54 Ga0207678_10061697 3300026067 Bacteria 3224
55 Ga0207708_10058153 3300026075 Bacteria 2950
56 Ga0207708_10070272 3300026075 Bacteria 2681
57 Ga0207702_10006269 3300026078 Bacteria 10278
58 Ga0207641_10000301 3300026088 Bacteria 61780
59 Ga0268266_10000045 3300028379 Bacteria 312955
60 Ga0316576_10177695 3300031727 Bacteria 1606
61 Ga0451853_2112576 3300041512 Bacteria 2408
62 Ga0466963_0000075 3300044694 Bacteria 34739
63 Ga0466967_0621384 3300045976 Bacteria 1067
64 Ga0495592_0000622 3300046454 Bacteria 24859
65 Ga0495603_0006955 3300046455 Bacteria 6786
66 Ga0495641_0000050 3300046461 Bacteria 73259
67 Ga0495651_0213399 3300046462 Bacteria 1341
68 Ga0495639_0039641 3300046475 Bacteria 2118
69 Ga0495662_0000102 3300046476 Bacteria 31112
70 Ga0495662_0009513 3300046476 Bacteria 4768
71 Ga0495608_0000288 3300046511 Bacteria 35332
72 Ga0495620_0001126 3300046515 Bacteria 16297
73 Ga0495628_0001530 3300046516 Bacteria 21206
74 Ga0495628_0014369 3300046516 Bacteria 6637
75 Ga0495630_0002067 3300046517 Bacteria 13956
76 Ga0495630_0077776 3300046517 Bacteria 2501
77 Ga0495644_0000853 3300046523 Bacteria 12570
78 Ga0495652_0099609 3300046529 Bacteria 2360
79 Ga0495586_0000426 3300046535 Bacteria 25579
80 Ga0495587_0140063 3300046536 Bacteria 1381
81 Ga0495633_0050828 3300046558 Bacteria 1953
82 Ga0495667_0041375 3300046559 Bacteria 3057
83 Ga0495634_0000034 3300046642 Bacteria 106338
84 Ga0495635_0000034 3300046663 Bacteria 96408
85 Ga0495647_0000105 3300046681 Bacteria 20768
86 Ga0495669_0000030 3300046684 Bacteria 102988
87 Ga0495613_0000083 3300046689 Bacteria 90138
88 Ga0495624_0000024 3300046690 Bacteria 98577
89 Ga0495624_0011561 3300046690 Bacteria 6063
90 Ga0495670_0067199 3300046691 Bacteria 1810
91 Ga0495649_0003217 3300046694 Bacteria 11153
92 Ga0495676_0005546 3300047321 Bacteria 11576
93 Ga0495680_0000569 3300047322 Bacteria 41472
94 Ga0495680_0001770 3300047322 Bacteria 22883
95 Ga0495680_0065189 3300047322 Bacteria 2790
96 Ga0495679_017743 3300047446 Bacteria 2542
97 Ga0495593_0078009 3300047673 Bacteria 1716
98 Ga0496100_0000005 3300048903 Bacteria 312112
99 Ga0496100_0000010 3300048903 Bacteria 205204
100 Ga0496101_0000022 3300048904 Bacteria 216728
101 Ga0496101_0000025 3300048904 Bacteria 205204
102 Ga0496102_0123291 3300048905 Bacteria 2421
103 Ga0496103_0007902 3300048906 Bacteria 6327
104 Ga0496104_0000009 3300048907 Bacteria 488055
105 Ga0496105_0000007 3300048908 Bacteria 339658
106 Ga0496106_0000012 3300048909 Bacteria 205158
107 Ga0496106_0000108 3300048909 Bacteria 64484
108 Ga0496106_0003254 3300048909 Bacteria 12148
109 Ga0496107_0000010 3300048910 Bacteria 205188
110 Ga0496107_0000011 3300048910 Bacteria 201631
111 Ga0496107_0076119 3300048910 Bacteria 2443
112 Ga0496108_0000001 3300048911 Bacteria 919044
113 Ga0496109_0000004 3300048912 Bacteria 404818
114 Ga0496112_0000013 3300048915 Bacteria 237194
115 Ga0496113_0021227 3300048916 Bacteria 4579
116 Ga0496113_0091398 3300048916 Bacteria 2346
117 Ga0496114_0000133 3300048917 Bacteria 53994
118 Ga0496114_0040357 3300048917 Bacteria 3864
119 Ga0496115_0000506 3300048918 Bacteria 30541
120 Ga0496117_0004956 3300048920 Bacteria 14298
121 Ga0496118_0001416 3300048921 Bacteria 36186
122 Ga0501036_0029980 3300049572 Bacteria 4597
123 Ga0501039_0036300 3300049575 Bacteria 3803
124 Ga0501040_0292931 3300049576 Unclassified 1163
125 Ga0501042_0091546 3300049578 Bacteria 2183
126 Ga0501071_0016275 3300049587 Bacteria 5114
127 Ga0501072_0015204 3300049588 Bacteria 5900
128 Ga0501075_0009574 3300049591 Bacteria 6783
129 Ga0501076_0007042 3300049592 Bacteria 8168
130 Ga0501076_0151501 3300049592 Bacteria 1886
131 Ga0501080_0289355 3300049742 Bacteria 1488
132 nmdc:mga0qj67_181148_c1 3300050509 Bacteria 1711
133 nmdc:mga0a205_1844_c1 3300050515 Bacteria 18344
134 Ga0495601_0001653 3300053077 Bacteria 12306
135 Ga0495612_0001252 3300053078 Bacteria 10477
136 Ga0495595_0000140 3300053084 Bacteria 29997
137 Ga0495619_0001980 3300053085 Bacteria 13640
138 Ga0500614_001129 3300053123 Bacteria 6573
139 Ga0500645_007734 3300053730 Bacteria 3719
140 Ga0501084_0005497 3300054114 Bacteria 10403
141 Ga0530510_0038735 3300061734 Bacteria 3442

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300046455 Ga0495603_0006955 Ga0495603_0006955_2302_3207 269
2 3300013308 Ga0157375_10052967 Ga0157375_100529673 270
3 3300053085 Ga0495619_0001980 Ga0495619_0001980_400_1221 273
4 3300046462 Ga0495651_0213399 Ga0495651_0213399_435_1265 275
5 3300047322 Ga0495680_0000569 Ga0495680_0000569_20647_21477 275
6 3300026035 Ga0207703_10359591 Ga0207703_103595912 276
7 3300048915 Ga0496112_0000013 Ga0496112_0000013_210701_211606 277
8 3300005457 Ga0070662_100000009 Ga0070662_1000000096 278
9 3300025933 Ga0207706_10000001 Ga0207706_10000001147 278
10 3300005535 Ga0070684_100330914 Ga0070684_1003309141 280
11 3300046476 Ga0495662_0009513 Ga0495662_0009513_2249_3154 281
12 3300006852 Ga0075433_10032004 Ga0075433_100320045 283
13 3300050515 nmdc:mga0a205_1844_c1 nmdc:mga0a205_1844_c1_7636_8541 283
14 3300025927 Ga0207687_10000695 Ga0207687_100006955 287
15 3300046559 Ga0495667_0041375 Ga0495667_0041375_333_1238 287
16 3300049578 Ga0501042_0091546 Ga0501042_0091546_414_1319 287
17 3300005544 Ga0070686_100031140 Ga0070686_1000311402 288
18 3300005842 Ga0068858_100019069 Ga0068858_1000190692 288
19 3300026035 Ga0207703_10000257 Ga0207703_1000025753 288
20 3300047322 Ga0495680_0065189 Ga0495680_0065189_1605_2474 288
21 3300048917 Ga0496114_0000133 Ga0496114_0000133_3623_4531 291
22 3300048918 Ga0496115_0000506 Ga0496115_0000506_27397_28305 291
23 3300045976 Ga0466967_0621384 Ga0466967_0621384_87_995 292
24 3300048905 Ga0496102_0123291 Ga0496102_0123291_628_1515 294
25 3300048906 Ga0496103_0007902 Ga0496103_0007902_4003_4890 294
26 3300048920 Ga0496117_0004956 Ga0496117_0004956_6405_7292 294
27 3300048921 Ga0496118_0001416 Ga0496118_0001416_9646_10533 294
28 3300031727 Ga0316576_10177695 Ga0316576_101776952 295
29 3300046517 Ga0495630_0077776 Ga0495630_0077776_1414_2319 295
30 3300048910 Ga0496107_0076119 Ga0496107_0076119_416_1366 295
31 3300046516 Ga0495628_0001530 Ga0495628_0001530_735_1640 300
32 3300001979 JGI24740J21852_10009790 JGI24740J21852_100097902 301
33 3300005336 Ga0070680_100424702 Ga0070680_1004247021 301
34 3300005337 Ga0070682_100000017 Ga0070682_10000001772 301
35 3300005338 Ga0068868_100000026 Ga0068868_10000002670 301
36 3300005340 Ga0070689_100176971 Ga0070689_1001769712 301
37 3300005366 Ga0070659_100169646 Ga0070659_1001696462 301
38 3300005439 Ga0070711_100006511 Ga0070711_1000065116 301
39 3300005441 Ga0070700_100067868 Ga0070700_1000678682 301
40 3300005458 Ga0070681_10009093 Ga0070681_100090938 301
41 3300005530 Ga0070679_100000244 Ga0070679_10000024438 301
42 3300005539 Ga0068853_100034449 Ga0068853_1000344493 301
43 3300005548 Ga0070665_100000040 Ga0070665_100000040269 301
44 3300005614 Ga0068856_100004075 Ga0068856_1000040755 301
45 3300005718 Ga0068866_10000340 Ga0068866_1000034021 301
46 3300005842 Ga0068858_100001002 Ga0068858_10000100223 301
47 3300009098 Ga0105245_10002314 Ga0105245_100023142 301
48 3300009101 Ga0105247_10001002 Ga0105247_100010023 301
49 3300009176 Ga0105242_10013906 Ga0105242_100139065 301
50 3300009551 Ga0105238_10000009 Ga0105238_1000000948 301
51 3300009553 Ga0105249_10000050 Ga0105249_10000050126 301
52 3300009553 Ga0105249_10336975 Ga0105249_103369751 301
53 3300013104 Ga0157370_10054861 Ga0157370_100548613 301
54 3300013296 Ga0157374_10000678 Ga0157374_1000067825 301
55 3300013308 Ga0157375_10000236 Ga0157375_1000023639 301
56 3300013308 Ga0157375_10373693 Ga0157375_103736931 301
57 3300014968 Ga0157379_10039456 Ga0157379_100394562 301
58 3300017792 Ga0163161_10000021 Ga0163161_1000002174 301
59 3300025899 Ga0207642_10003479 Ga0207642_100034795 301
60 3300025900 Ga0207710_10000461 Ga0207710_100004613 301
61 3300025912 Ga0207707_10075862 Ga0207707_100758623 301
62 3300025916 Ga0207663_10026169 Ga0207663_100261693 301
63 3300025921 Ga0207652_10000395 Ga0207652_100003958 301
64 3300025924 Ga0207694_10000004 Ga0207694_10000004247 301
65 3300025927 Ga0207687_10000013 Ga0207687_10000013251 301
66 3300025932 Ga0207690_10110508 Ga0207690_101105082 301
67 3300025934 Ga0207686_10013646 Ga0207686_100136463 301
68 3300025936 Ga0207670_10144082 Ga0207670_101440822 301
69 3300025937 Ga0207669_10000006 Ga0207669_1000000637 301
70 3300025961 Ga0207712_10000019 Ga0207712_1000001942 301
71 3300025961 Ga0207712_10237172 Ga0207712_102371721 301
72 3300026023 Ga0207677_10000106 Ga0207677_1000010657 301
73 3300026035 Ga0207703_10000078 Ga0207703_1000007829 301
74 3300026041 Ga0207639_10024239 Ga0207639_100242394 301
75 3300026067 Ga0207678_10061697 Ga0207678_100616972 301
76 3300026075 Ga0207708_10058153 Ga0207708_100581532 301
77 3300026075 Ga0207708_10070272 Ga0207708_100702722 301
78 3300026078 Ga0207702_10006269 Ga0207702_100062695 301
79 3300026088 Ga0207641_10000301 Ga0207641_1000030115 301
80 3300028379 Ga0268266_10000045 Ga0268266_10000045270 301
81 3300041512 Ga0451853_2112576 Ga0451853_2112576_698_1603 301
82 3300044694 Ga0466963_0000075 Ga0466963_0000075_6620_7525 301
83 3300046454 Ga0495592_0000622 Ga0495592_0000622_15833_16741 301
84 3300046461 Ga0495641_0000050 Ga0495641_0000050_54237_55172 301
85 3300046475 Ga0495639_0039641 Ga0495639_0039641_367_1272 301
86 3300046476 Ga0495662_0000102 Ga0495662_0000102_17281_18186 301
87 3300046511 Ga0495608_0000288 Ga0495608_0000288_28845_29753 301
88 3300046515 Ga0495620_0001126 Ga0495620_0001126_818_1723 301
89 3300046516 Ga0495628_0014369 Ga0495628_0014369_717_1622 301
90 3300046517 Ga0495630_0002067 Ga0495630_0002067_5779_6684 301
91 3300046523 Ga0495644_0000853 Ga0495644_0000853_5043_5948 301
92 3300046529 Ga0495652_0099609 Ga0495652_0099609_223_1128 301
93 3300046535 Ga0495586_0000426 Ga0495586_0000426_15506_16411 301
94 3300046536 Ga0495587_0140063 Ga0495587_0140063_234_1139 301
95 3300046558 Ga0495633_0050828 Ga0495633_0050828_790_1725 301
96 3300046642 Ga0495634_0000034 Ga0495634_0000034_46705_47610 301
97 3300046663 Ga0495635_0000034 Ga0495635_0000034_34086_34994 301
98 3300046681 Ga0495647_0000105 Ga0495647_0000105_6605_7510 301
99 3300046684 Ga0495669_0000030 Ga0495669_0000030_4565_5572 301
100 3300046689 Ga0495613_0000083 Ga0495613_0000083_4003_4911 301
101 3300046690 Ga0495624_0000024 Ga0495624_0000024_13262_14167 301
102 3300046690 Ga0495624_0011561 Ga0495624_0011561_901_1809 301
103 3300046691 Ga0495670_0067199 Ga0495670_0067199_142_1077 301
104 3300046694 Ga0495649_0003217 Ga0495649_0003217_6696_7601 301
105 3300047321 Ga0495676_0005546 Ga0495676_0005546_8981_9886 301
106 3300047322 Ga0495680_0001770 Ga0495680_0001770_13357_14262 301
107 3300047446 Ga0495679_017743 Ga0495679_017743_1444_2349 301
108 3300047673 Ga0495593_0078009 Ga0495593_0078009_476_1381 301
109 3300048903 Ga0496100_0000005 Ga0496100_0000005_142402_143307 301
110 3300048903 Ga0496100_0000010 Ga0496100_0000010_100842_101747 301
111 3300048904 Ga0496101_0000022 Ga0496101_0000022_98379_99284 301
112 3300048904 Ga0496101_0000025 Ga0496101_0000025_100842_101747 301
113 3300048907 Ga0496104_0000009 Ga0496104_0000009_430699_431604 301
114 3300048908 Ga0496105_0000007 Ga0496105_0000007_56452_57357 301
115 3300048909 Ga0496106_0000012 Ga0496106_0000012_103430_104335 301
116 3300048909 Ga0496106_0000108 Ga0496106_0000108_26314_27219 301
117 3300048909 Ga0496106_0003254 Ga0496106_0003254_3628_4533 301
118 3300048910 Ga0496107_0000010 Ga0496107_0000010_103442_104347 301
119 3300048910 Ga0496107_0000011 Ga0496107_0000011_168576_169481 301
120 3300048911 Ga0496108_0000001 Ga0496108_0000001_869297_870202 301
121 3300048912 Ga0496109_0000004 Ga0496109_0000004_123108_124013 301
122 3300048916 Ga0496113_0021227 Ga0496113_0021227_12_917 301
123 3300048916 Ga0496113_0091398 Ga0496113_0091398_661_1566 301
124 3300048917 Ga0496114_0040357 Ga0496114_0040357_1385_2290 301
125 3300049572 Ga0501036_0029980 Ga0501036_0029980_2435_3346 301
126 3300049575 Ga0501039_0036300 Ga0501039_0036300_2384_3295 301
127 3300049576 Ga0501040_0292931 Ga0501040_0292931_166_1077 301
128 3300049587 Ga0501071_0016275 Ga0501071_0016275_3390_4301 301
129 3300049588 Ga0501072_0015204 Ga0501072_0015204_4848_5759 301
130 3300049591 Ga0501075_0009574 Ga0501075_0009574_2391_3296 301
131 3300049592 Ga0501076_0007042 Ga0501076_0007042_2210_3121 301
132 3300049592 Ga0501076_0151501 Ga0501076_0151501_950_1876 301
133 3300049742 Ga0501080_0289355 Ga0501080_0289355_272_1183 301
134 3300050509 nmdc:mga0qj67_181148_c1 nmdc:mga0qj67_181148_c1_18_923 301
135 3300053077 Ga0495601_0001653 Ga0495601_0001653_1077_1982 301
136 3300053078 Ga0495612_0001252 Ga0495612_0001252_6748_7653 301
137 3300053084 Ga0495595_0000140 Ga0495595_0000140_11172_12080 301
138 3300053123 Ga0500614_001129 Ga0500614_001129_2637_3572 301
139 3300053730 Ga0500645_007734 Ga0500645_007734_2584_3525 301
140 3300054114 Ga0501084_0005497 Ga0501084_0005497_1103_2014 301
141 3300061734 Ga0530510_0038735 Ga0530510_0038735_372_1283 301

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02911

Formyl_trans_C

Formyl transferase, C-terminal domain

200

291

0.94

PF00551

Formyl_trans_N

Formyl transferase

1

178

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
4iqf-assembly2.cif.gz_B crystal structure of methyionyl-trna formyltransferase from bacillus anthracis 0.9285 1 295
3tqq-assembly1.cif.gz_A structure of the methionyl-trna formyltransferase (fmt) from coxiella burnetii 0.9271 2 296
4iqf-assembly2.cif.gz_B crystal structure of methyionyl-trna formyltransferase from bacillus anthracis 0.908 1 295
2fmt-assembly2.cif.gz_B methionyl-trnafmet formyltransferase complexed with formyl-methionyl-trnafmet 0.9064 2 296
6pih-assembly1.cif.gz_A hexameric arna cryo-em structure 0.8928 1 294
ID Description Score Start End Superfamily
af_P9WND3_1_310_3.40.50.12230 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9346 1 295 3.40.50.12230
3tqqA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9343 2 203 3.40.50.170
3tqqA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9203 2 203 3.40.50.170
af_B4FRN6_28_246_3.40.50.170 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9197 2 203 3.40.50.170
af_P9WND3_1_310_3.40.50.12230 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9138 1 295 3.40.50.12230
ID Description Score Start End GO Terms
AF-A0A3D3YYJ5-F1-model_v4 methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.9665 1 195 GO:0004479
GO:0005829
AF-A0A7C7KXL8-F1-model_v4 methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.9651 1 237 GO:0004479
GO:0005829
AF-A0A3B8JDQ4-F1-model_v4 methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.9584 1 224 GO:0004479
GO:0005829
AF-A0A1V5RNR2-F1-model_v4 Methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.957 1 296 GO:0004479
AF-A0A7J9YZP7-F1-model_v4 Methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.9564 1 301 GO:0004479
GO:0005829

Feature Viewer

pLDDT pTM Quality
94.74 0.9 High
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Predicted Structure (AlphaFold2)

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