F175552

General Info

Members Datasets Scaffolds Average Seq Length
139 97 278 301

Family's Representative Sequence

Representative Sequence 3300005440|Ga0070705_100019575|Ga0070705_1000195752
Length 320
Sequence MSGDPQGDVAQRLQVAPEVAAALDEGRPVVALESTLISHGFAYPDNLAVARASEAAVRESGAVPATVAIHAGRLLVGLDASALEALATAEPGSVAKAARPSLAPALAGGGWAATTVSASMIAAHAAGITVFATGGIGGVHRASGPAAAAGGVSLDISSDLDELARTPMAVVCAGPKAILDVPNTLEVLETRGVPVVALGQADLPGFYARSAGIAAPHSVADEAAAAELIATHLGDMALPEAVARDAVEQATREAGEAGVHGPALTPWLLARIAAITDGASVRANTALIVNNARVAGRLARAVSSGAQPAPASVAAASGRR

Samples

Sample ID Description Type Environment
1 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
2 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
3 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
4 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
5 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
6 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
13 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
14 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
15 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
16 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
17 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
35 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
36 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
37 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
50 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
51 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
52 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
53 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
54 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
55 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
56 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
57 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
58 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
59 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
60 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
61 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
62 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
63 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
64 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
65 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
66 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
67 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
68 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
69 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
70 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
71 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
72 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
75 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
76 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
77 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
78 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
79 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
80 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
81 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
82 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
83 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
84 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
85 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
86 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
87 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
88 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
89 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
90 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
91 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
92 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
93 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
94 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
95 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
96 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
97 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 12.95
Rhizosphere 87.05
Stem 0
Stem Tuber 0
Unclassified 1.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070705_100019575 3300005440 Bacteria 3564
2 Ga0070687_100230079 3300005343 Bacteria 1140
3 Ga0070705_100070893 3300005440 Bacteria 2106
4 Ga0070700_100057863 3300005441 Bacteria 2434
5 Ga0070700_100099313 3300005441 Bacteria 1915
6 Ga0070694_100035128 3300005444 Bacteria 3311
7 Ga0070694_100125020 3300005444 Bacteria 1850
8 Ga0070708_100000401 3300005445 Bacteria 32682
9 Ga0070708_100103821 3300005445 Bacteria 2606
10 Ga0070681_10222674 3300005458 Bacteria 1802
11 Ga0070706_100000753 3300005467 Bacteria 36268
12 Ga0070706_100042073 3300005467 Bacteria 4220
13 Ga0070707_100000785 3300005468 Bacteria 31403
14 Ga0070707_100003224 3300005468 Bacteria 15445
15 Ga0070698_100052123 3300005471 Bacteria 4165
16 Ga0070698_100145706 3300005471 Bacteria 2318
17 Ga0070699_100005449 3300005518 Bacteria 11154
18 Ga0070699_100026758 3300005518 Bacteria 4975
19 Ga0070699_100039071 3300005518 Bacteria 4109
20 Ga0070699_100193580 3300005518 Bacteria 1807
21 Ga0070684_100391759 3300005535 Bacteria 1280
22 Ga0070697_100028439 3300005536 Bacteria 4477
23 Ga0070697_100048488 3300005536 Bacteria 3444
24 Ga0068853_100127035 3300005539 Bacteria 2279
25 Ga0070686_100132825 3300005544 Bacteria 1723
26 Ga0070695_100056074 3300005545 Bacteria 2541
27 Ga0070695_100057443 3300005545 Bacteria 2514
28 Ga0070696_100003401 3300005546 Bacteria 10612
29 Ga0070696_100019980 3300005546 Bacteria 4540
30 Ga0070696_100048151 3300005546 Bacteria 2958
31 Ga0070696_100089127 3300005546 Bacteria 2193
32 Ga0070693_100224357 3300005547 Bacteria 1233
33 Ga0070704_100022745 3300005549 Bacteria 4083
34 Ga0068855_100073352 3300005563 Bacteria 3977
35 Ga0068854_100241779 3300005578 Bacteria 1438
36 Ga0068864_100380759 3300005618 Bacteria 1337
37 Ga0068860_100185814 3300005843 Bacteria 2010
38 Ga0068862_100101663 3300005844 Bacteria 2515
39 Ga0068862_100272589 3300005844 Bacteria 1548
40 Ga0081539_10009028 3300005985 Bacteria 8467
41 Ga0075428_100000642 3300006844 Bacteria 35902
42 Ga0075428_100173674 3300006844 Unclassified 2335
43 Ga0075431_100131783 3300006847 Bacteria 2578
44 Ga0075433_10406335 3300006852 Bacteria 1201
45 Ga0075434_100135614 3300006871 Bacteria 2480
46 Ga0075429_100061201 3300006880 Bacteria 3279
47 Ga0075436_100061159 3300006914 Bacteria 2602
48 Ga0105245_10776442 3300009098 Bacteria 995
49 Ga0114129_10462821 3300009147 Unclassified 1662
50 Ga0163163_10018249 3300014325 Bacteria 6563
51 Ga0163163_10080747 3300014325 Bacteria 3252
52 Ga0157380_10082488 3300014326 Bacteria 2632
53 Ga0182008_10014339 3300014497 Bacteria 4151
54 Ga0157379_10003842 3300014968 Bacteria 12803
55 Ga0157379_10412609 3300014968 Bacteria 1243
56 Ga0207684_10001245 3300025910 Bacteria 28278
57 Ga0207684_10219110 3300025910 Bacteria 1642
58 Ga0207707_10179363 3300025912 Bacteria 1849
59 Ga0207662_10064605 3300025918 Bacteria 2202
60 Ga0207646_10004144 3300025922 Bacteria 15926
61 Ga0207646_10008886 3300025922 Bacteria 10008
62 Ga0207646_10056631 3300025922 Bacteria 3503
63 Ga0207646_10167550 3300025922 Bacteria 1983
64 Ga0207687_10048222 3300025927 Bacteria 2956
65 Ga0207706_10178178 3300025933 Bacteria 1867
66 Ga0207667_10076106 3300025949 Bacteria 3484
67 Ga0207639_10445560 3300026041 Bacteria 1174
68 Ga0207708_10067653 3300026075 Bacteria 2733
69 Ga0207641_10366350 3300026088 Bacteria 1377
70 Ga0207676_10341903 3300026095 Bacteria 1381
71 Ga0268264_10094265 3300028381 Bacteria 2588
72 Ga0307408_100156814 3300031548 Bacteria 1804
73 Ga0307405_10091459 3300031731 Bacteria 2016
74 Ga0307409_100051539 3300031995 Bacteria 3150
75 Ga0307416_100394112 3300032002 Bacteria 1420
76 Ga0307415_100089845 3300032126 Bacteria 2220
77 Ga0373926_0051946 3300035083 Bacteria 1480
78 Ga0373935_0220639 3300035692 Bacteria 1317
79 Ga0450910_003682 3300042147 Bacteria 2045
80 Ga0495613_0229556 3300046689 Bacteria 1301
81 Ga0495674_0412725 3300047319 Bacteria 1089
82 Ga0495680_0315145 3300047322 Bacteria 1096
83 Ga0495602_0296023 3300048088 Bacteria 1186
84 Ga0496102_0363103 3300048905 Bacteria 1363
85 Ga0496103_0060941 3300048906 Bacteria 2346
86 Ga0496104_0142414 3300048907 Bacteria 2303
87 Ga0496105_0029446 3300048908 Bacteria 4494
88 Ga0496107_0177556 3300048910 Bacteria 1581
89 Ga0496108_0036656 3300048911 Bacteria 4081
90 Ga0496109_0040967 3300048912 Bacteria 4196
91 Ga0496109_0042470 3300048912 Bacteria 4118
92 Ga0496109_0171957 3300048912 Bacteria 2033
93 Ga0496111_0131677 3300048914 Bacteria 1851
94 Ga0496111_0233606 3300048914 Bacteria 1366
95 Ga0496112_0000001 3300048915 Bacteria 1346031
96 Ga0496112_0123404 3300048915 Bacteria 2561
97 Ga0496112_0267878 3300048915 Bacteria 1657
98 Ga0496113_0030646 3300048916 Bacteria 3895
99 Ga0496113_0033644 3300048916 Bacteria 3735
100 Ga0496114_0068705 3300048917 Bacteria 2975
101 Ga0496114_0096649 3300048917 Bacteria 2515
102 Ga0501041_0095585 3300049577 Bacteria 1837
103 Ga0501041_0219759 3300049577 Bacteria 1192
104 Ga0501046_0099909 3300049580 Bacteria 2227
105 Ga0501048_0060854 3300049582 Bacteria 2675
106 Ga0501067_0006140 3300049583 Bacteria 6660
107 Ga0501068_0035218 3300049584 Bacteria 2987
108 Ga0501071_0132145 3300049587 Bacteria 1855
109 Ga0501072_0068056 3300049588 Bacteria 2811
110 Ga0501075_0076984 3300049591 Bacteria 2524
111 Ga0501075_0186292 3300049591 Bacteria 1583
112 Ga0501076_0107185 3300049592 Bacteria 2256
113 Ga0501076_0227737 3300049592 Bacteria 1524
114 Ga0501077_0076417 3300049593 Bacteria 2121
115 Ga0501079_0089448 3300049741 Bacteria 2384
116 Ga0501079_0091049 3300049741 Bacteria 2363
117 Ga0501079_0098264 3300049741 Bacteria 2269
118 Ga0501080_0021904 3300049742 Bacteria 5919
119 Ga0501080_0524020 3300049742 Bacteria 1057
120 Ga0501081_0103806 3300049743 Bacteria 2012
121 Ga0501083_0156464 3300049744 Bacteria 1492
122 Ga0501045_0004332 3300049824 Bacteria 9786
123 Ga0501045_0144901 3300049824 Bacteria 1767
124 nmdc:mga05p37_449_c1 3300050507 Bacteria 44732
125 nmdc:mga06r32_63281_c1 3300050510 Bacteria 3565
126 nmdc:mga0n895_156553_c1 3300050512 Bacteria 2309
127 nmdc:mga0n895_50527_c1 3300050512 Bacteria 4076
128 nmdc:mga08x19_52727_c1 3300050514 Bacteria 2616
129 nmdc:mga0a205_31221_c1 3300050515 Bacteria 5103
130 nmdc:mga0a205_399757_c1 3300050515 Bacteria 1238
131 Ga0495601_0060239 3300053077 Bacteria 2409
132 Ga0495612_0002790 3300053078 Bacteria 7227
133 Ga0501084_0053430 3300054114 Bacteria 3379
134 Ga0590071_000939 3300059421 Bacteria 8070
135 Ga0501082_0131279 3300060353 Bacteria 2174
136 Ga0501082_0134439 3300060353 Bacteria 2146
137 Ga0530510_0064682 3300061734 Bacteria 2649
138 Ga0530510_0076911 3300061734 Bacteria 2426
139 Ga0530510_0104037 3300061734 Bacteria 2077
140 Ga0070705_100019575
141 Ga0070687_100230079
142 Ga0070705_100070893
143 Ga0070700_100057863
144 Ga0070700_100099313
145 Ga0070694_100035128
146 Ga0070694_100125020
147 Ga0070708_100000401
148 Ga0070708_100103821
149 Ga0070681_10222674
150 Ga0070706_100000753
151 Ga0070706_100042073
152 Ga0070707_100000785
153 Ga0070707_100003224
154 Ga0070698_100052123
155 Ga0070698_100145706
156 Ga0070699_100005449
157 Ga0070699_100026758
158 Ga0070699_100039071
159 Ga0070699_100193580
160 Ga0070684_100391759
161 Ga0070697_100028439
162 Ga0070697_100048488
163 Ga0068853_100127035
164 Ga0070686_100132825
165 Ga0070695_100056074
166 Ga0070695_100057443
167 Ga0070696_100003401
168 Ga0070696_100019980
169 Ga0070696_100048151
170 Ga0070696_100089127
171 Ga0070693_100224357
172 Ga0070704_100022745
173 Ga0068855_100073352
174 Ga0068854_100241779
175 Ga0068864_100380759
176 Ga0068860_100185814
177 Ga0068862_100101663
178 Ga0068862_100272589
179 Ga0081539_10009028
180 Ga0075428_100000642
181 Ga0075428_100173674
182 Ga0075431_100131783
183 Ga0075433_10406335
184 Ga0075434_100135614
185 Ga0075429_100061201
186 Ga0075436_100061159
187 Ga0105245_10776442
188 Ga0114129_10462821
189 Ga0163163_10018249
190 Ga0163163_10080747
191 Ga0157380_10082488
192 Ga0182008_10014339
193 Ga0157379_10003842
194 Ga0157379_10412609
195 Ga0207684_10001245
196 Ga0207684_10219110
197 Ga0207707_10179363
198 Ga0207662_10064605
199 Ga0207646_10004144
200 Ga0207646_10008886
201 Ga0207646_10056631
202 Ga0207646_10167550
203 Ga0207687_10048222
204 Ga0207706_10178178
205 Ga0207667_10076106
206 Ga0207639_10445560
207 Ga0207708_10067653
208 Ga0207641_10366350
209 Ga0207676_10341903
210 Ga0268264_10094265
211 Ga0307408_100156814
212 Ga0307405_10091459
213 Ga0307409_100051539
214 Ga0307416_100394112
215 Ga0307415_100089845
216 Ga0373926_0051946
217 Ga0373935_0220639
218 Ga0450910_003682
219 Ga0495613_0229556
220 Ga0495674_0412725
221 Ga0495680_0315145
222 Ga0495602_0296023
223 Ga0496102_0363103
224 Ga0496103_0060941
225 Ga0496104_0142414
226 Ga0496105_0029446
227 Ga0496107_0177556
228 Ga0496108_0036656
229 Ga0496109_0040967
230 Ga0496109_0042470
231 Ga0496109_0171957
232 Ga0496111_0131677
233 Ga0496111_0233606
234 Ga0496112_0000001
235 Ga0496112_0123404
236 Ga0496112_0267878
237 Ga0496113_0030646
238 Ga0496113_0033644
239 Ga0496114_0068705
240 Ga0496114_0096649
241 Ga0501041_0095585
242 Ga0501041_0219759
243 Ga0501046_0099909
244 Ga0501048_0060854
245 Ga0501067_0006140
246 Ga0501068_0035218
247 Ga0501071_0132145
248 Ga0501072_0068056
249 Ga0501075_0076984
250 Ga0501075_0186292
251 Ga0501076_0107185
252 Ga0501076_0227737
253 Ga0501077_0076417
254 Ga0501079_0089448
255 Ga0501079_0091049
256 Ga0501079_0098264
257 Ga0501080_0021904
258 Ga0501080_0524020
259 Ga0501081_0103806
260 Ga0501083_0156464
261 Ga0501045_0004332
262 Ga0501045_0144901
263 nmdc:mga05p37_449_c1
264 nmdc:mga06r32_63281_c1
265 nmdc:mga0n895_156553_c1
266 nmdc:mga0n895_50527_c1
267 nmdc:mga08x19_52727_c1
268 nmdc:mga0a205_31221_c1
269 nmdc:mga0a205_399757_c1
270 Ga0495601_0060239
271 Ga0495612_0002790
272 Ga0501084_0053430
273 Ga0590071_000939
274 Ga0501082_0131279
275 Ga0501082_0134439
276 Ga0530510_0064682
277 Ga0530510_0076911
278 Ga0530510_0104037

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04227

Indigoidine_A

Indigoidine synthase A like protein

18

301

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
4gij-assembly1.cif.gz_B crystal structure of pseudouridine monophosphate glycosidase complexed with sulfate 0.7829 12 283
4gim-assembly1.cif.gz_C crystal structure of pseudouridine monophosphate glycosidase complexed with pseudouridine 5'-phosphate 0.7786 3 283
4gil-assembly1.cif.gz_B crystal structure of pseudouridine monophosphate glycosidase/linear pseudouridine 5'-phosphate adduct 0.7778 1 282
4gij-assembly1.cif.gz_A crystal structure of pseudouridine monophosphate glycosidase complexed with sulfate 0.7752 12 282
4gik-assembly1.cif.gz_C crystal structure of pseudouridine monophosphate glycosidase/linear r5p adduct 0.7696 3 282
ID Description Score Start End Superfamily
af_Q22721_11_315_3.40.1790.10 Alpha Beta;3-Layer(aba) Sandwich;Indigoidine synthase fold;Indigoidine synthase domain 0.8153 7 283 3.40.1790.10
af_A0A1D6HG93_1_304_3.40.1790.10 Alpha Beta;3-Layer(aba) Sandwich;Indigoidine synthase fold;Indigoidine synthase domain 0.8049 12 286 3.40.1790.10
af_Q9USY1_38_343_3.40.1790.10 Alpha Beta;3-Layer(aba) Sandwich;Indigoidine synthase fold;Indigoidine synthase domain 0.7977 11 287 3.40.1790.10
4gimA00 Alpha Beta;3-Layer(aba) Sandwich;Indigoidine synthase fold;Indigoidine synthase domain 0.7967 12 282 3.40.1790.10
af_Q22721_11_315_3.40.1790.10 Alpha Beta;3-Layer(aba) Sandwich;Indigoidine synthase fold;Indigoidine synthase domain 0.7712 7 283 3.40.1790.10
ID Description Score Start End GO Terms
AF-A0A838RXU8-F1-model_v4 Pseudouridine-5'-phosphate glycosidase 0.9939 10 80 GO:0004730
GO:0005737
GO:0016798
GO:0046872
AF-A0A7W1CD25-F1-model_v4 Pseudouridine-5'-phosphate glycosidase 0.9914 13 89 GO:0004730
GO:0005737
GO:0016798
GO:0046872
AF-A0A7S1N8Z0-F1-model_v4 Pseudouridine-5'-phosphate glycosidase 0.9872 12 81 GO:0004730
GO:0005737
GO:0016798
GO:0046872
AF-A0A833G6V9-F1-model_v4 Pseudouridine-5'-phosphate glycosidase 0.9865 12 98 GO:0004730
GO:0005737
GO:0016798
GO:0046872
AF-A0A7Z9Y1Z5-F1-model_v4 Pseudouridine-5-phosphate glycosidase 0.9836 12 89 GO:0004730
GO:0005737
GO:0016798
GO:0046872

Map