F172922

General Info

Members Datasets Scaffolds Average Seq Length
138 101 136 495

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10113155|Ga0111539_101131551
Length 545
Sequence LPASFLWRDENQRQKDDLYIKPFLHLPMKKISISRRQMLKATSFTALSAIASNTFVSAKAAISNGDIKNTKLPGNPSDLCYLNAVDVAALLRTKKISAREVMQSHLKQIGKVNSKVNAFITFVPEDQLMAQCLAADEALAKGTLLGPLHGLPIAVKDLADTKGLKTTYGSPLWKDYIPSEDSLIVERERKAGAIILGKTNVPELGMGSQTFNPLFGPTFNPYDITKTCGGSTGGGAVALACGMTPLADGSDMAGSLRNPGSFCNVVGLRPSPGRIPLVTSKLAWQTLSVQGPMARTVSDCAFLLSVQAGPDSRSPISIMENPQQFSRPLERNMKGVRVAFIKDFGLPWEREVKDAVDSQRKVFESLGCIVEENEPDMTDANECFVGLRHWQYEVQYGDMLEANGDKMNEYTKWHITEGRKLTGPNLARLEAKRSTLFRRIQVFLEKYEFIIMPVSQVLPFDVNTPYPTEIAGVKMLTYLDWMRSAYYLSVVGNPALSVPCAFSKTGLPIGIQIVGRHNADFSVLQMGFAFEQATNIGKRRPEIVN

Samples

Sample ID Description Type Environment
1 2862574272 Streptomyces sp. AcE210 Isolate Nodule
2 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
28 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
42 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
46 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
47 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
62 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
63 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
64 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
65 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
66 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
67 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
68 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
69 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
70 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
71 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
72 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
73 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
74 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
75 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
76 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
77 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
78 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
79 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
80 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
81 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
82 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
83 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
84 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
85 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
86 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
87 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
88 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
89 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
90 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
91 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
92 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
93 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
94 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
95 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
96 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
97 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
98 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
99 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
100 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
101 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.55
Metatranscriptomes 0
Isolates 1.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.72
Nodule 0.72
Rhizoplane 2.17
Rhizosphere 92.03
Stem 0
Stem Tuber 0
Unclassified 4.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10107231 3300003322 Bacteria 13713
2 Ga0070683_100000424 3300005329 Bacteria 29241
3 Ga0068869_100002057 3300005334 Bacteria 12093
4 Ga0070680_100029305 3300005336 Bacteria 4421
5 Ga0068868_100005450 3300005338 Bacteria 8944
6 Ga0068868_100028429 3300005338 Bacteria 4274
7 Ga0070674_100004225 3300005356 Bacteria 8162
8 Ga0070714_100012968 3300005435 Bacteria 6665
9 Ga0070713_100003283 3300005436 Bacteria 10658
10 Ga0070713_100098554 3300005436 Bacteria 2528
11 Ga0070711_100066457 3300005439 Unclassified 2526
12 Ga0070700_100052720 3300005441 Unclassified 2537
13 Ga0070700_100127176 3300005441 Bacteria 1715
14 Ga0068867_100037999 3300005459 Bacteria 3503
15 Ga0070684_100077931 3300005535 Bacteria 2928
16 Ga0068853_100168905 3300005539 Bacteria 1978
17 Ga0070693_100034944 3300005547 Bacteria 2784
18 Ga0070664_100034957 3300005564 Bacteria 4217
19 Ga0068854_100010298 3300005578 Bacteria 6059
20 Ga0068859_100009430 3300005617 Bacteria 9861
21 Ga0068858_100009862 3300005842 Bacteria 9074
22 Ga0068860_100022113 3300005843 Bacteria 6156
23 Ga0068860_100029719 3300005843 Bacteria 5257
24 Ga0068860_100041790 3300005843 Bacteria 4380
25 Ga0070717_10021155 3300006028 Bacteria 5124
26 Ga0070717_10042128 3300006028 Unclassified 3724
27 Ga0070712_100029289 3300006175 Bacteria 3689
28 Ga0097621_100012805 3300006237 Bacteria 6231
29 Ga0097621_100019219 3300006237 Bacteria 5240
30 Ga0097621_100027936 3300006237 Bacteria 4442
31 Ga0068871_100000861 3300006358 Bacteria 20243
32 Ga0068871_100001565 3300006358 Bacteria 15355
33 Ga0068871_100132709 3300006358 Bacteria 2113
34 Ga0075431_100185023 3300006847 Bacteria 2136
35 Ga0068865_100014784 3300006881 Bacteria 4967
36 Ga0068865_100099721 3300006881 Bacteria 2124
37 Ga0075436_100000524 3300006914 Bacteria 24995
38 Ga0097620_100009431 3300006931 Bacteria 9861
39 Ga0099794_10002751 3300007265 Bacteria 6566
40 Ga0099794_10006269 3300007265 Bacteria 4803
41 Ga0105240_10013481 3300009093 Bacteria 11228
42 Ga0111539_10113155 3300009094 Unclassified 3183
43 Ga0105245_10002208 3300009098 Bacteria 17641
44 Ga0105245_10018451 3300009098 Bacteria 6100
45 Ga0105245_10069998 3300009098 Unclassified 3182
46 Ga0105245_10094289 3300009098 Unclassified 2759
47 Ga0105245_10123349 3300009098 Bacteria 2423
48 Ga0105247_10063342 3300009101 Unclassified 2295
49 Ga0105243_10021048 3300009148 Unclassified 4949
50 Ga0105243_10026056 3300009148 Plasmid 4474
51 Ga0105242_10002869 3300009176 Bacteria 13500
52 Ga0105242_10003347 3300009176 Bacteria 12467
53 Ga0105242_10141903 3300009176 Bacteria 2085
54 Ga0105248_10005040 3300009177 Bacteria 14589
55 Ga0105248_10013807 3300009177 Bacteria 8887
56 Ga0105248_10025239 3300009177 Bacteria 6608
57 Ga0105248_10104930 3300009177 Bacteria 3186
58 Ga0105248_10161589 3300009177 Bacteria 2526
59 Ga0105237_10013299 3300009545 Bacteria 8632
60 Ga0105249_10075727 3300009553 Bacteria 3117
61 Ga0157369_10062043 3300013105 Bacteria 4029
62 Ga0157374_10009297 3300013296 Bacteria 8429
63 Ga0157378_10000800 3300013297 Bacteria 29301
64 Ga0157378_10001625 3300013297 Bacteria 20326
65 Ga0163162_10007191 3300013306 Bacteria 10811
66 Ga0163162_10122542 3300013306 Unclassified 2705
67 Ga0157375_10016071 3300013308 Bacteria 6714
68 Ga0163163_10066547 3300014325 Bacteria 3579
69 Ga0163163_10147223 3300014325 Bacteria 2399
70 Ga0157380_10041236 3300014326 Bacteria 3601
71 Ga0157380_10225415 3300014326 Unclassified 1680
72 Ga0207647_10002559 3300025904 Bacteria 13755
73 Ga0207681_10071938 3300025923 Bacteria 2413
74 Ga0207700_10001381 3300025928 Bacteria 13780
75 Ga0207686_10006566 3300025934 Bacteria 6263
76 Ga0207686_10060784 3300025934 Bacteria 2393
77 Ga0207704_10072102 3300025938 Bacteria 2194
78 Ga0207711_10154222 3300025941 Unclassified 2075
79 Ga0207689_10010019 3300025942 Bacteria 8170
80 Ga0207661_10013053 3300025944 Bacteria 6062
81 Ga0207661_10132790 3300025944 Bacteria 2135
82 Ga0207712_10039917 3300025961 Bacteria 3218
83 Ga0207640_10005781 3300025981 Bacteria 6744
84 Ga0207677_10007110 3300026023 Bacteria 6164
85 Ga0207703_10012363 3300026035 Bacteria 6653
86 Ga0207648_10036117 3300026089 Bacteria 4353
87 Ga0268264_10044324 3300028381 Bacteria 3690
88 Ga0268264_10070843 3300028381 Unclassified 2952
89 Ga0307509_10075989 3300031507 Unclassified 3487
90 Ga0307408_100056844 3300031548 Bacteria 2838
91 Ga0316575_10003436 3300031665 Bacteria 5462
92 Ga0316579_10003204 3300031691 Bacteria 6336
93 Ga0265314_10003687 3300031711 Bacteria 14688
94 Ga0307412_10023208 3300031911 Bacteria 3814
95 Ga0307409_100052717 3300031995 Bacteria 3121
96 Ga0307416_100099054 3300032002 Bacteria 2530
97 Ga0316583_10025215 3300032133 Bacteria 2123
98 Ga0373926_0003000 3300035083 Bacteria 5402
99 Ga0373946_0011488 3300035171 Bacteria 3305
100 Ga0373955_0084008 3300035172 Bacteria 1804
101 Ga0373927_0004206 3300035695 Bacteria 10113
102 Ga0373937_0005167 3300036401 Bacteria 11133
103 Ga0373937_0282281 3300036401 Unclassified 1568
104 Ga0316582_0024073 3300036647 Bacteria 3638
105 Ga0373925_0006160 3300037068 Bacteria 8857
106 Ga0373925_0012964 3300037068 Bacteria 6037
107 Ga0316581_0000359 3300037588 Bacteria 8392
108 Ga0436364_0870755 3300037853 Bacteria 4897
109 Ga0436364_1299489 3300037853 Bacteria 9940
110 Ga0466967_0095288 3300045976 Bacteria 2712
111 Ga0495603_0015895 3300046455 Bacteria 4549
112 Ga0495638_0000001 3300046460 Bacteria 1114121
113 Ga0495638_0031242 3300046460 Bacteria 3424
114 Ga0495580_0004194 3300046472 Bacteria 12123
115 Ga0495580_0137675 3300046472 Bacteria 1693
116 Ga0495608_0127315 3300046511 Bacteria 1631
117 Ga0495630_0018532 3300046517 Bacteria 5115
118 Ga0495630_0127248 3300046517 Bacteria 1934
119 Ga0495667_0001613 3300046559 Bacteria 14956
120 Ga0495611_0031607 3300046648 Bacteria 2331
121 Ga0495635_0067425 3300046663 Bacteria 2455
122 Ga0495613_0090078 3300046689 Bacteria 2222
123 Ga0495624_0050682 3300046690 Bacteria 2629
124 Ga0495670_0038645 3300046691 Bacteria 2380
125 Ga0495581_0045828 3300047315 Bacteria 2527
126 Ga0495604_0025169 3300047317 Bacteria 4742
127 Ga0495604_0046669 3300047317 Bacteria 3378
128 Ga0495675_0151406 3300047444 Bacteria 1433
129 Ga0496102_0010865 3300048905 Bacteria 7838
130 Ga0496112_0005165 3300048915 Bacteria 11219
131 Ga0496115_0035279 3300048918 Bacteria 3956
132 Ga0496126_0004974 3300048929 Bacteria 15503
133 nmdc:mga06r32_5896_c1 3300050510 Bacteria 11029
134 nmdc:mga08x19_1269_c1 3300050514 Bacteria 15677
135 Ga0495619_0018448 3300053085 Bacteria 4427
136 Ga0500616_0000009 3300053153 Bacteria 779095

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300036401 Ga0373937_0282281 Ga0373937_0282281_325_1551 388
2 3300046511 Ga0495608_0127315 Ga0495608_0127315_29_1420 413
3 3300047315 Ga0495581_0045828 Ga0495581_0045828_432_1943 413
4 3300046472 Ga0495580_0004194 Ga0495580_0004194_2656_4005 428
5 3300006175 Ga0070712_100029289 Ga0070712_1000292892 438
6 3300025923 Ga0207681_10071938 Ga0207681_100719381 438
7 3300031665 Ga0316575_10003436 Ga0316575_100034364 438
8 3300031691 Ga0316579_10003204 Ga0316579_100032044 438
9 3300032133 Ga0316583_10025215 Ga0316583_100252152 438
10 3300036647 Ga0316582_0024073 Ga0316582_0024073_2123_3532 438
11 3300037588 Ga0316581_0000359 Ga0316581_0000359_3205_4614 438
12 3300025934 Ga0207686_10006566 Ga0207686_100065663 439
13 3300009093 Ga0105240_10013481 Ga0105240_100134814 440
14 3300009148 Ga0105243_10021048 Ga0105243_100210486 440
15 3300046460 Ga0495638_0031242 Ga0495638_0031242_1214_2719 440
16 3300046648 Ga0495611_0031607 Ga0495611_0031607_512_1963 441
17 3300006237 Ga0097621_100019219 Ga0097621_1000192195 442
18 3300006881 Ga0068865_100014784 Ga0068865_1000147844 442
19 3300009176 Ga0105242_10002869 Ga0105242_100028695 442
20 3300025934 Ga0207686_10060784 Ga0207686_100607842 442
21 3300026089 Ga0207648_10036117 Ga0207648_100361173 442
22 3300047444 Ga0495675_0151406 Ga0495675_0151406_14_1405 443
23 3300005329 Ga0070683_100000424 Ga0070683_10000042418 444
24 3300014325 Ga0163163_10066547 Ga0163163_100665472 444
25 3300048915 Ga0496112_0005165 Ga0496112_0005165_6457_7848 444
26 3300046455 Ga0495603_0015895 Ga0495603_0015895_1424_2884 446
27 3300046691 Ga0495670_0038645 Ga0495670_0038645_910_2370 446
28 3300006028 Ga0070717_10042128 Ga0070717_100421283 447
29 3300046689 Ga0495613_0090078 Ga0495613_0090078_101_1525 447
30 3300005356 Ga0070674_100004225 Ga0070674_1000042256 449
31 3300006881 Ga0068865_100099721 Ga0068865_1000997212 449
32 3300009098 Ga0105245_10123349 Ga0105245_101233492 449
33 3300009177 Ga0105248_10161589 Ga0105248_101615892 449
34 3300009553 Ga0105249_10075727 Ga0105249_100757272 449
35 3300014326 Ga0157380_10041236 Ga0157380_100412362 449
36 3300014326 Ga0157380_10225415 Ga0157380_102254151 449
37 3300025938 Ga0207704_10072102 Ga0207704_100721022 449
38 3300025961 Ga0207712_10039917 Ga0207712_100399171 449
39 3300009176 Ga0105242_10141903 Ga0105242_101419032 450
40 3300035172 Ga0373955_0084008 Ga0373955_0084008_226_1662 451
41 3300005338 Ga0068868_100005450 Ga0068868_1000054505 452
42 3300005547 Ga0070693_100034944 Ga0070693_1000349442 452
43 3300005578 Ga0068854_100010298 Ga0068854_1000102984 452
44 3300006237 Ga0097621_100027936 Ga0097621_1000279362 452
45 3300006358 Ga0068871_100001565 Ga0068871_1000015659 452
46 3300009098 Ga0105245_10002208 Ga0105245_1000220812 452
47 3300009177 Ga0105248_10104930 Ga0105248_101049302 452
48 3300013297 Ga0157378_10000800 Ga0157378_1000080012 452
49 3300025981 Ga0207640_10005781 Ga0207640_100057814 452
50 3300026023 Ga0207677_10007110 Ga0207677_100071107 452
51 3300037853 Ga0436364_1299489 Ga0436364_1299489_7768_9270 453
52 3300014325 Ga0163163_10147223 Ga0163163_101472231 455
53 3300025944 Ga0207661_10013053 Ga0207661_100130534 455
54 3300031711 Ga0265314_10003687 Ga0265314_100036873 455
55 3300037853 Ga0436364_0870755 Ga0436364_0870755_938_2416 455
56 3300046472 Ga0495580_0137675 Ga0495580_0137675_42_1490 455
57 3300048929 Ga0496126_0004974 Ga0496126_0004974_5103_6599 455
58 iso_pu_bacteria 2862574272 2862577811 455
59 3300009176 Ga0105242_10003347 Ga0105242_100033477 456
60 3300005435 Ga0070714_100012968 Ga0070714_1000129682 457
61 3300005436 Ga0070713_100003283 Ga0070713_1000032832 457
62 3300005439 Ga0070711_100066457 Ga0070711_1000664572 457
63 3300005441 Ga0070700_100127176 Ga0070700_1001271762 457
64 3300005535 Ga0070684_100077931 Ga0070684_1000779312 457
65 3300005843 Ga0068860_100022113 Ga0068860_1000221133 457
66 3300006028 Ga0070717_10021155 Ga0070717_100211552 457
67 3300009098 Ga0105245_10069998 Ga0105245_100699982 457
68 3300009148 Ga0105243_10026056 Ga0105243_100260562 457
69 3300025928 Ga0207700_10001381 Ga0207700_100013818 457
70 3300028381 Ga0268264_10044324 Ga0268264_100443242 457
71 3300031548 Ga0307408_100056844 Ga0307408_1000568442 457
72 3300031911 Ga0307412_10023208 Ga0307412_100232081 457
73 3300031995 Ga0307409_100052717 Ga0307409_1000527174 457
74 3300032002 Ga0307416_100099054 Ga0307416_1000990543 457
75 3300036401 Ga0373937_0005167 Ga0373937_0005167_8094_9650 457
76 3300037068 Ga0373925_0012964 Ga0373925_0012964_3766_5256 457
77 3300005334 Ga0068869_100002057 Ga0068869_1000020578 458
78 3300005338 Ga0068868_100028429 Ga0068868_1000284293 458
79 3300005441 Ga0070700_100052720 Ga0070700_1000527202 458
80 3300005459 Ga0068867_100037999 Ga0068867_1000379992 458
81 3300005617 Ga0068859_100009430 Ga0068859_10000943013 458
82 3300005842 Ga0068858_100009862 Ga0068858_1000098624 458
83 3300005843 Ga0068860_100029719 Ga0068860_1000297192 458
84 3300006358 Ga0068871_100132709 Ga0068871_1001327092 458
85 3300006931 Ga0097620_100009431 Ga0097620_10000943113 458
86 3300009098 Ga0105245_10018451 Ga0105245_100184513 458
87 3300009098 Ga0105245_10094289 Ga0105245_100942892 458
88 3300009101 Ga0105247_10063342 Ga0105247_100633422 458
89 3300009177 Ga0105248_10013807 Ga0105248_100138075 458
90 3300009177 Ga0105248_10025239 Ga0105248_100252393 458
91 3300009545 Ga0105237_10013299 Ga0105237_100132995 458
92 3300013296 Ga0157374_10009297 Ga0157374_100092979 458
93 3300013297 Ga0157378_10001625 Ga0157378_100016259 458
94 3300013306 Ga0163162_10122542 Ga0163162_101225422 458
95 3300013308 Ga0157375_10016071 Ga0157375_100160716 458
96 3300025904 Ga0207647_10002559 Ga0207647_100025593 458
97 3300025941 Ga0207711_10154222 Ga0207711_101542222 458
98 3300025942 Ga0207689_10010019 Ga0207689_100100194 458
99 3300026035 Ga0207703_10012363 Ga0207703_100123633 458
100 3300028381 Ga0268264_10070843 Ga0268264_100708432 458
101 3300047317 Ga0495604_0046669 Ga0495604_0046669_1103_2596 458
102 3300048905 Ga0496102_0010865 Ga0496102_0010865_947_2494 458
103 3300048918 Ga0496115_0035279 Ga0496115_0035279_69_1523 458
104 3300005336 Ga0070680_100029305 Ga0070680_1000293055 459
105 3300005564 Ga0070664_100034957 Ga0070664_1000349572 459
106 3300006847 Ga0075431_100185023 Ga0075431_1001850232 459
107 3300007265 Ga0099794_10006269 Ga0099794_100062694 459
108 3300025944 Ga0207661_10132790 Ga0207661_101327902 459
109 3300045976 Ga0466967_0095288 Ga0466967_0095288_117_1688 459
110 3300046460 Ga0495638_0000001 Ga0495638_0000001_867777_869327 459
111 3300047317 Ga0495604_0025169 Ga0495604_0025169_1880_3376 459
112 3300050510 nmdc:mga06r32_5896_c1 nmdc:mga06r32_5896_c1_9162_10703 459
113 3300053153 Ga0500616_0000009 Ga0500616_0000009_87548_89104 459
114 iso_pu_bacteria 2995463766 2995470198 459
115 3300005843 Ga0068860_100041790 Ga0068860_1000417902 460
116 3300009094 Ga0111539_10113155 Ga0111539_101131551 460
117 3300013105 Ga0157369_10062043 Ga0157369_100620433 460
118 3300031507 Ga0307509_10075989 Ga0307509_100759893 460
119 3300046517 Ga0495630_0127248 Ga0495630_0127248_93_1649 460
120 3300046559 Ga0495667_0001613 Ga0495667_0001613_7334_8851 460
121 3300053085 Ga0495619_0018448 Ga0495619_0018448_435_1991 460
122 3300005436 Ga0070713_100098554 Ga0070713_1000985542 461
123 3300005539 Ga0068853_100168905 Ga0068853_1001689052 461
124 3300006237 Ga0097621_100012805 Ga0097621_1000128054 461
125 3300006358 Ga0068871_100000861 Ga0068871_1000008615 461
126 3300006914 Ga0075436_100000524 Ga0075436_10000052412 461
127 3300007265 Ga0099794_10002751 Ga0099794_100027512 461
128 3300009177 Ga0105248_10005040 Ga0105248_1000504010 461
129 3300013306 Ga0163162_10007191 Ga0163162_100071916 461
130 3300035083 Ga0373926_0003000 Ga0373926_0003000_2126_3694 461
131 3300035171 Ga0373946_0011488 Ga0373946_0011488_1657_3225 461
132 3300035695 Ga0373927_0004206 Ga0373927_0004206_1603_3171 461
133 3300037068 Ga0373925_0006160 Ga0373925_0006160_4364_5932 461
134 3300046517 Ga0495630_0018532 Ga0495630_0018532_554_2122 461
135 3300046663 Ga0495635_0067425 Ga0495635_0067425_636_2138 461
136 3300046690 Ga0495624_0050682 Ga0495624_0050682_812_2380 461
137 3300050514 nmdc:mga08x19_1269_c1 nmdc:mga08x19_1269_c1_1645_3213 461
138 3300003322 rootL2_10107231 rootL2_101072313 462

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01425

Amidase

Amidase

100

524

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
4yji-assembly1.cif.gz_A the crystal structure of a bacterial aryl acylamidase belonging to the amidase signature (as) enzymes family 0.9024 17 461
4yj6-assembly1.cif.gz_A the crystal structure of a bacterial aryl acylamidase belonging to the amidase signature (as) enzymes family 0.8894 17 461
3ip4-assembly1.cif.gz_A the high resolution structure of gatcab 0.8842 15 454
3a2q-assembly1.cif.gz_A structure of 6-aminohexanoate cyclic dimer hydrolase complexed with substrate 0.8827 16 462
1obj-assembly1.cif.gz_B crystal structure of the t150a mutant of malonamidase e2 from bradyrhizobium japonicum 0.8817 18 446
ID Description Score Start End Superfamily
af_Q9LI77_43_527_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8921 18 446 3.90.1300.10
2dc0A00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8811 18 455 3.90.1300.10
2dqnA00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8808 15 453 3.90.1300.10
6c6gA00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8796 18 446 3.90.1300.10
4yj6A00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8761 17 461 3.90.1300.10
ID Description Score Start End GO Terms
AF-A0A3B8PY46-F1-model_v4 Amidase 0.9917 11 171 GO:0003824
AF-A0A3S1E0Z4-F1-model_v4 Amidase 0.9859 15 140 GO:0012505
AF-A0A1I7DZQ0-F1-model_v4 Amidase 0.9845 15 177 GO:0003824
AF-A0A7K4F853-F1-model_v4 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA 0.9807 16 179 GO:0016740
AF-A0A3B8PY46-F1-model_v4 Amidase 0.9795 11 171 GO:0003824

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pLDDT pTM Quality
88.99 0.91 High
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Predicted Structure (AlphaFold2)

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