F170381

General Info

Members Datasets Scaffolds Average Seq Length
137 103 137 389

Family's Representative Sequence

Representative Sequence 3300031852|Ga0307410_10062895|Ga0307410_100628952
Length 422
Sequence MVNGRVDARLRMPSDPSTTPFDSPALAHGKPIDVVRVITRLNIGGPSIQATRLTNALDRDGFRTTLIHGRLGEGEGDMSYLIAPGSHAIHMPTLCRPLSPLDDLRTLLRLYGEIKRARPLIVHTHMAKAGLLGRLAAAAYNMMRGPAPRARVVHTYHGHVLEGYFSPLMTSVFINLERMLARASDRIIAISPAIERDLRDTFRIGRAEQYRIVPLGFDLSQFAAVDDRARALARQALQLPADAEVVSTVGRLTAIKQHRLFLEAVRDAAKTRPQLIALIAGDGELRGELEAYARELGIADRVRFLGWRRDLATIYAATNVFLLTSRNEGTPVALIEAMASGVPGVSTDVGGVKDVIAADDLGAKVRDGDAEALSAHIVRYLADPQLRRDTGTRARAAVLAKYGLDRLVNDIIALYRDLLAAP

Samples

Sample ID Description Type Environment
1 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
5 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
29 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
30 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
31 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
32 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
33 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
46 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
47 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
66 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
67 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
68 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
69 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
70 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
71 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
72 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
73 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
74 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
75 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
76 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
77 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
78 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
79 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
80 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
81 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
82 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
83 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
84 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
85 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
86 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
87 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
88 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
89 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
90 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
91 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
92 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
93 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
94 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
95 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
96 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
97 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
98 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
99 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
100 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
101 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
102 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
103 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.73
Nodule 0
Rhizoplane 0.73
Rhizosphere 98.54
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070676_10126621 3300005328 Unclassified 1610
2 Ga0070690_100091629 3300005330 Bacteria 2003
3 Ga0068868_100038728 3300005338 Bacteria 3701
4 Ga0070691_10010569 3300005341 Bacteria 4214
5 Ga0070669_100091300 3300005353 Bacteria 2284
6 Ga0070709_10070629 3300005434 Bacteria 2251
7 Ga0070701_10006251 3300005438 Bacteria 4998
8 Ga0070711_100109415 3300005439 Unclassified 2026
9 Ga0070705_100023630 3300005440 Bacteria 3305
10 Ga0070700_100005276 3300005441 Bacteria 6838
11 Ga0070700_100015117 3300005441 Bacteria 4370
12 Ga0070694_100008294 3300005444 Bacteria 6356
13 Ga0070694_100085992 3300005444 Bacteria 2197
14 Ga0070708_100079323 3300005445 Bacteria 2970
15 Ga0070678_100215223 3300005456 Bacteria 1594
16 Ga0070681_10272704 3300005458 Unclassified 1603
17 Ga0068867_100079936 3300005459 Bacteria 2461
18 Ga0070707_100033888 3300005468 Unclassified 4870
19 Ga0070699_100002313 3300005518 Bacteria 17147
20 Ga0070686_100009957 3300005544 Bacteria 5349
21 Ga0070695_100003010 3300005545 Bacteria 9821
22 Ga0070696_100078212 3300005546 Unclassified 2338
23 Ga0070665_100000642 3300005548 Bacteria 47343
24 Ga0070665_100003436 3300005548 Bacteria 16914
25 Ga0070704_100073769 3300005549 Unclassified 2487
26 Ga0070704_100118095 3300005549 Unclassified 2031
27 Ga0068864_100146648 3300005618 Unclassified 2134
28 Ga0068861_100035252 3300005719 Bacteria 3705
29 Ga0068858_100001222 3300005842 Bacteria 26604
30 Ga0081455_10059810 3300005937 Unclassified 3215
31 Ga0097621_100004068 3300006237 Bacteria 10148
32 Ga0097621_100005130 3300006237 Bacteria 9201
33 Ga0068871_100001323 3300006358 Bacteria 16569
34 Ga0068871_100001536 3300006358 Bacteria 15484
35 Ga0068871_100223079 3300006358 Bacteria 1634
36 Ga0075428_100120707 3300006844 Bacteria 2854
37 Ga0075433_10019499 3300006852 Bacteria 5653
38 Ga0075434_100007571 3300006871 Bacteria 10061
39 Ga0075434_100243335 3300006871 Unclassified 1819
40 Ga0068865_100002037 3300006881 Bacteria 11930
41 Ga0075436_100007993 3300006914 Bacteria 7241
42 Ga0075436_100093150 3300006914 Unclassified 2095
43 Ga0097620_100122089 3300006931 Bacteria 2672
44 Ga0075435_100152391 3300007076 Unclassified 1944
45 Ga0111539_10016613 3300009094 Bacteria 9121
46 Ga0111539_10424485 3300009094 Bacteria 1549
47 Ga0105245_10231380 3300009098 Bacteria 1788
48 Ga0105247_10054880 3300009101 Bacteria 2459
49 Ga0114129_10001423 3300009147 Bacteria 32287
50 Ga0114129_10005858 3300009147 Bacteria 17400
51 Ga0114129_10013036 3300009147 Bacteria 11841
52 Ga0114129_10029511 3300009147 Bacteria 7768
53 Ga0114129_10070692 3300009147 Bacteria 4867
54 Ga0114129_10110883 3300009147 Bacteria 3787
55 Ga0114129_10388807 3300009147 Bacteria 1841
56 Ga0105243_10077319 3300009148 Bacteria 2707
57 Ga0105243_10191625 3300009148 Bacteria 1786
58 Ga0105242_10000614 3300009176 Bacteria 27893
59 Ga0105248_10036905 3300009177 Bacteria 5466
60 Ga0105248_10141381 3300009177 Bacteria 2715
61 Ga0105248_10174396 3300009177 Unclassified 2424
62 Ga0105248_10188520 3300009177 Bacteria 2323
63 Ga0163162_10333473 3300013306 Unclassified 1649
64 Ga0163163_10165610 3300014325 Bacteria 2256
65 Ga0157380_10024210 3300014326 Unclassified 4592
66 Ga0157376_10005838 3300014969 Bacteria 8632
67 Ga0157376_10019800 3300014969 Bacteria 5194
68 Ga0207642_10013931 3300025899 Bacteria 2950
69 Ga0207710_10027582 3300025900 Bacteria 2460
70 Ga0207699_10063165 3300025906 Bacteria 2236
71 Ga0207660_10106490 3300025917 Bacteria 2103
72 Ga0207646_10076126 3300025922 Unclassified 2998
73 Ga0207681_10035836 3300025923 Bacteria 3271
74 Ga0207686_10010394 3300025934 Bacteria 5069
75 Ga0207704_10065639 3300025938 Unclassified 2273
76 Ga0207704_10093854 3300025938 Bacteria 1980
77 Ga0207711_10038100 3300025941 Bacteria 4087
78 Ga0207640_10032307 3300025981 Bacteria 3244
79 Ga0207677_10019866 3300026023 Bacteria 4067
80 Ga0207703_10008815 3300026035 Bacteria 7952
81 Ga0207708_10005235 3300026075 Bacteria 9553
82 Ga0207708_10011141 3300026075 Bacteria 6688
83 Ga0207648_10009695 3300026089 Bacteria 9210
84 Ga0207648_10013659 3300026089 Bacteria 7539
85 Ga0207675_100002922 3300026118 Bacteria 16804
86 Ga0207683_10026965 3300026121 Bacteria 4965
87 Ga0207683_10043136 3300026121 Unclassified 3940
88 Ga0268266_10014200 3300028379 Bacteria 6851
89 Ga0268265_10220006 3300028380 Bacteria 1661
90 Ga0265332_10017023 3300031238 Bacteria 3207
91 Ga0307410_10057520 3300031852 Bacteria 2648
92 Ga0307410_10062895 3300031852 Bacteria 2545
93 Ga0307407_10041411 3300031903 Bacteria 2576
94 Ga0307409_100400376 3300031995 Unclassified 1311
95 Ga0307416_100284462 3300032002 Bacteria 1633
96 Ga0373956_0111572 3300035119 Bacteria 1273
97 Ga0373943_0140047 3300035170 Bacteria 1302
98 Ga0373946_0009241 3300035171 Unclassified 3627
99 Ga0450888_002941 3300042126 Bacteria 1703
100 Ga0451576_0366951 3300045051 Bacteria 1508
101 Ga0495629_0053052 3300046459 Unclassified 2837
102 Ga0495651_0196106 3300046462 Unclassified 1417
103 Ga0495582_0029980 3300046473 Unclassified 2986
104 Ga0495640_0043709 3300046533 Unclassified 3119
105 Ga0495621_0003163 3300046539 Bacteria 4511
106 Ga0495658_0052842 3300046683 Unclassified 2306
107 Ga0495669_0005280 3300046684 Bacteria 5380
108 Ga0495613_0001485 3300046689 Bacteria 17885
109 Ga0495600_0112953 3300046809 Unclassified 1769
110 Ga0495604_0002678 3300047317 Bacteria 14303
111 Ga0495674_0064480 3300047319 Unclassified 3185
112 Ga0495684_0000099 3300047471 Bacteria 60765
113 Ga0496114_0069852 3300048917 Unclassified 2950
114 Ga0501072_0092520 3300049588 Bacteria 2402
115 Ga0501073_0015313 3300049589 Bacteria 5560
116 Ga0501076_0207655 3300049592 Unclassified 1600
117 Ga0501081_0165117 3300049743 Bacteria 1597
118 Ga0501045_0054722 3300049824 Bacteria 2918
119 nmdc:mga05p37_17770_c1 3300050507 Bacteria 8582
120 nmdc:mga05p37_28100_c1 3300050507 Bacteria 6855
121 nmdc:mga05p37_28172_c1 3300050507 Bacteria 6848
122 nmdc:mga05p37_37580_c1 3300050507 Bacteria 5937
123 nmdc:mga05p37_55088_c1 3300050507 Bacteria 4892
124 nmdc:mga05p37_70322_c1 3300050507 Bacteria 4304
125 nmdc:mga08y16_332986_c1 3300050511 Bacteria 1561
126 nmdc:mga08y16_33982_c1 3300050511 Bacteria 5357
127 nmdc:mga08y16_346850_c1 3300050511 Unclassified 1526
128 nmdc:mga0n895_114617_c1 3300050512 Bacteria 2713
129 nmdc:mga0n895_18623_c1 3300050512 Bacteria 6430
130 nmdc:mga0rr50_51194_c1 3300050513 Unclassified 3063
131 nmdc:mga08x19_83881_c1 3300050514 Unclassified 2095
132 nmdc:mga0a205_12226_c1 3300050515 Bacteria 7938
133 Ga0495601_0020243 3300053077 Unclassified 4063
134 Ga0495595_0057323 3300053084 Unclassified 1817
135 Ga0495619_0114344 3300053085 Unclassified 1846
136 Ga0500555_023629 3300053103 Bacteria 1763
137 Ga0501084_0168573 3300054114 Bacteria 1848

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035119 Ga0373956_0111572 Ga0373956_0111572_258_1262 330
2 3300005719 Ga0068861_100035252 Ga0068861_1000352522 341
3 3300025923 Ga0207681_10035836 Ga0207681_100358362 341
4 3300026075 Ga0207708_10005235 Ga0207708_100052355 341
5 3300026089 Ga0207648_10009695 Ga0207648_100096952 341
6 3300026118 Ga0207675_100002922 Ga0207675_10000292212 341
7 3300009177 Ga0105248_10036905 Ga0105248_100369051 354
8 3300005937 Ga0081455_10059810 Ga0081455_100598103 358
9 3300006914 Ga0075436_100007993 Ga0075436_1000079935 360
10 3300007076 Ga0075435_100152391 Ga0075435_1001523912 360
11 3300050513 nmdc:mga0rr50_51194_c1 nmdc:mga0rr50_51194_c1_459_1658 360
12 3300005458 Ga0070681_10272704 Ga0070681_102727042 362
13 3300046459 Ga0495629_0053052 Ga0495629_0053052_113_1276 363
14 3300046462 Ga0495651_0196106 Ga0495651_0196106_26_1189 363
15 3300046473 Ga0495582_0029980 Ga0495582_0029980_532_1695 363
16 3300046533 Ga0495640_0043709 Ga0495640_0043709_1531_2694 363
17 3300046689 Ga0495613_0001485 Ga0495613_0001485_6198_7361 363
18 3300046809 Ga0495600_0112953 Ga0495600_0112953_592_1755 363
19 3300047317 Ga0495604_0002678 Ga0495604_0002678_7585_8748 363
20 3300047319 Ga0495674_0064480 Ga0495674_0064480_797_1960 363
21 3300047471 Ga0495684_0000099 Ga0495684_0000099_7431_8594 363
22 3300053077 Ga0495601_0020243 Ga0495601_0020243_2434_3597 363
23 3300053084 Ga0495595_0057323 Ga0495595_0057323_26_1189 363
24 3300053085 Ga0495619_0114344 Ga0495619_0114344_672_1835 363
25 3300006871 Ga0075434_100243335 Ga0075434_1002433352 365
26 3300009147 Ga0114129_10013036 Ga0114129_100130368 372
27 3300050507 nmdc:mga05p37_55088_c1 nmdc:mga05p37_55088_c1_1579_2769 372
28 3300009177 Ga0105248_10188520 Ga0105248_101885202 373
29 3300031238 Ga0265332_10017023 Ga0265332_100170232 373
30 3300013306 Ga0163162_10333473 Ga0163162_103334732 375
31 3300048917 Ga0496114_0069852 Ga0496114_0069852_80_1282 377
32 3300031852 Ga0307410_10057520 Ga0307410_100575202 379
33 3300042126 Ga0450888_002941 Ga0450888_002941_131_1288 383
34 3300005341 Ga0070691_10010569 Ga0070691_100105694 387
35 3300005353 Ga0070669_100091300 Ga0070669_1000913002 387
36 3300005438 Ga0070701_10006251 Ga0070701_100062513 387
37 3300005440 Ga0070705_100023630 Ga0070705_1000236302 387
38 3300005441 Ga0070700_100015117 Ga0070700_1000151175 387
39 3300005444 Ga0070694_100085992 Ga0070694_1000859922 387
40 3300005459 Ga0068867_100079936 Ga0068867_1000799362 387
41 3300005546 Ga0070696_100078212 Ga0070696_1000782122 387
42 3300005549 Ga0070704_100073769 Ga0070704_1000737692 387
43 3300009148 Ga0105243_10077319 Ga0105243_100773192 387
44 3300025981 Ga0207640_10032307 Ga0207640_100323072 387
45 3300006237 Ga0097621_100005130 Ga0097621_1000051303 388
46 3300006358 Ga0068871_100001323 Ga0068871_1000013234 388
47 3300006358 Ga0068871_100223079 Ga0068871_1002230792 388
48 3300006914 Ga0075436_100093150 Ga0075436_1000931503 388
49 3300009094 Ga0111539_10424485 Ga0111539_104244851 388
50 3300009147 Ga0114129_10388807 Ga0114129_103888071 388
51 3300032002 Ga0307416_100284462 Ga0307416_1002844621 388
52 3300046539 Ga0495621_0003163 Ga0495621_0003163_639_1838 388
53 3300049592 Ga0501076_0207655 Ga0501076_0207655_246_1442 388
54 3300049824 Ga0501045_0054722 Ga0501045_0054722_600_1793 388
55 3300050511 nmdc:mga08y16_332986_c1 nmdc:mga08y16_332986_c1_268_1467 388
56 3300050514 nmdc:mga08x19_83881_c1 nmdc:mga08x19_83881_c1_626_1801 388
57 3300053103 Ga0500555_023629 Ga0500555_023629_400_1596 388
58 3300005328 Ga0070676_10126621 Ga0070676_101266211 389
59 3300005330 Ga0070690_100091629 Ga0070690_1000916291 389
60 3300005338 Ga0068868_100038728 Ga0068868_1000387282 389
61 3300005434 Ga0070709_10070629 Ga0070709_100706292 389
62 3300005439 Ga0070711_100109415 Ga0070711_1001094152 389
63 3300005441 Ga0070700_100005276 Ga0070700_1000052762 389
64 3300005444 Ga0070694_100008294 Ga0070694_1000082942 389
65 3300005445 Ga0070708_100079323 Ga0070708_1000793232 389
66 3300005456 Ga0070678_100215223 Ga0070678_1002152232 389
67 3300005468 Ga0070707_100033888 Ga0070707_1000338882 389
68 3300005518 Ga0070699_100002313 Ga0070699_10000231311 389
69 3300005544 Ga0070686_100009957 Ga0070686_1000099572 389
70 3300005545 Ga0070695_100003010 Ga0070695_1000030108 389
71 3300005548 Ga0070665_100000642 Ga0070665_10000064238 389
72 3300005548 Ga0070665_100003436 Ga0070665_1000034365 389
73 3300005549 Ga0070704_100118095 Ga0070704_1001180952 389
74 3300005618 Ga0068864_100146648 Ga0068864_1001466482 389
75 3300005842 Ga0068858_100001222 Ga0068858_10000122218 389
76 3300006237 Ga0097621_100004068 Ga0097621_1000040684 389
77 3300006358 Ga0068871_100001536 Ga0068871_1000015364 389
78 3300006844 Ga0075428_100120707 Ga0075428_1001207072 389
79 3300006852 Ga0075433_10019499 Ga0075433_100194993 389
80 3300006871 Ga0075434_100007571 Ga0075434_1000075713 389
81 3300006881 Ga0068865_100002037 Ga0068865_10000203711 389
82 3300006931 Ga0097620_100122089 Ga0097620_1001220892 389
83 3300009094 Ga0111539_10016613 Ga0111539_100166133 389
84 3300009098 Ga0105245_10231380 Ga0105245_102313802 389
85 3300009101 Ga0105247_10054880 Ga0105247_100548802 389
86 3300009147 Ga0114129_10001423 Ga0114129_1000142318 389
87 3300009147 Ga0114129_10005858 Ga0114129_100058583 389
88 3300009147 Ga0114129_10029511 Ga0114129_100295111 389
89 3300009147 Ga0114129_10070692 Ga0114129_100706922 389
90 3300009147 Ga0114129_10110883 Ga0114129_101108832 389
91 3300009148 Ga0105243_10191625 Ga0105243_101916251 389
92 3300009176 Ga0105242_10000614 Ga0105242_1000061415 389
93 3300009177 Ga0105248_10141381 Ga0105248_101413812 389
94 3300009177 Ga0105248_10174396 Ga0105248_101743962 389
95 3300014325 Ga0163163_10165610 Ga0163163_101656101 389
96 3300014326 Ga0157380_10024210 Ga0157380_100242103 389
97 3300014969 Ga0157376_10005838 Ga0157376_100058382 389
98 3300014969 Ga0157376_10019800 Ga0157376_100198003 389
99 3300025899 Ga0207642_10013931 Ga0207642_100139312 389
100 3300025900 Ga0207710_10027582 Ga0207710_100275822 389
101 3300025906 Ga0207699_10063165 Ga0207699_100631652 389
102 3300025917 Ga0207660_10106490 Ga0207660_101064902 389
103 3300025922 Ga0207646_10076126 Ga0207646_100761262 389
104 3300025934 Ga0207686_10010394 Ga0207686_100103942 389
105 3300025938 Ga0207704_10065639 Ga0207704_100656392 389
106 3300025938 Ga0207704_10093854 Ga0207704_100938542 389
107 3300025941 Ga0207711_10038100 Ga0207711_100381005 389
108 3300026023 Ga0207677_10019866 Ga0207677_100198662 389
109 3300026035 Ga0207703_10008815 Ga0207703_100088156 389
110 3300026075 Ga0207708_10011141 Ga0207708_100111415 389
111 3300026089 Ga0207648_10013659 Ga0207648_100136595 389
112 3300026121 Ga0207683_10026965 Ga0207683_100269652 389
113 3300026121 Ga0207683_10043136 Ga0207683_100431362 389
114 3300028379 Ga0268266_10014200 Ga0268266_100142002 389
115 3300028380 Ga0268265_10220006 Ga0268265_102200062 389
116 3300031852 Ga0307410_10062895 Ga0307410_100628952 389
117 3300031903 Ga0307407_10041411 Ga0307407_100414111 389
118 3300031995 Ga0307409_100400376 Ga0307409_1004003761 389
119 3300035170 Ga0373943_0140047 Ga0373943_0140047_101_1285 389
120 3300035171 Ga0373946_0009241 Ga0373946_0009241_1935_3119 389
121 3300045051 Ga0451576_0366951 Ga0451576_0366951_40_1227 389
122 3300046683 Ga0495658_0052842 Ga0495658_0052842_501_1670 389
123 3300046684 Ga0495669_0005280 Ga0495669_0005280_14_1192 389
124 3300049588 Ga0501072_0092520 Ga0501072_0092520_570_1814 389
125 3300049589 Ga0501073_0015313 Ga0501073_0015313_2209_3420 389
126 3300049743 Ga0501081_0165117 Ga0501081_0165117_141_1385 389
127 3300050507 nmdc:mga05p37_17770_c1 nmdc:mga05p37_17770_c1_461_1648 389
128 3300050507 nmdc:mga05p37_28100_c1 nmdc:mga05p37_28100_c1_1975_3174 389
129 3300050507 nmdc:mga05p37_28172_c1 nmdc:mga05p37_28172_c1_307_1509 389
130 3300050507 nmdc:mga05p37_37580_c1 nmdc:mga05p37_37580_c1_168_1355 389
131 3300050507 nmdc:mga05p37_70322_c1 nmdc:mga05p37_70322_c1_127_1329 389
132 3300050511 nmdc:mga08y16_33982_c1 nmdc:mga08y16_33982_c1_2780_3982 389
133 3300050511 nmdc:mga08y16_346850_c1 nmdc:mga08y16_346850_c1_25_1227 389
134 3300050512 nmdc:mga0n895_114617_c1 nmdc:mga0n895_114617_c1_422_1609 389
135 3300050512 nmdc:mga0n895_18623_c1 nmdc:mga0n895_18623_c1_2689_3861 389
136 3300050515 nmdc:mga0a205_12226_c1 nmdc:mga0a205_12226_c1_3815_5017 389
137 3300054114 Ga0501084_0168573 Ga0501084_0168573_78_1322 389

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00534

Glycos_transf_1

Glycosyl transferases group 1

229

397

0.97

PF13439

Glyco_transf_4

Glycosyltransferase Family 4

43

221

0.95

PF13692

Glyco_trans_1_4

Glycosyl transferases group 1

243

383

0.94

PF13524

Glyco_trans_1_2

Glycosyl transferases group 1

251

413

0.85

PF13579

Glyco_trans_4_4

Glycosyl transferase 4-like domain

44

216

0.85

PF20706

GT4-conflict

Family 4 Glycosyltransferase in conflict systems

129

410

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
3qhp-assembly1.cif.gz_A crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from helicobacter pylori 0.8771 211 369
5i45-assembly1.cif.gz_A 1.35 angstrom crystal structure of c-terminal domain of glycosyl transferase group 1 family protein (lpcc) from francisella tularensis. 0.8621 185 373
3qhp-assembly1.cif.gz_A crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from helicobacter pylori 0.8616 211 369
3mbo-assembly1.cif.gz_B crystal structure of the glycosyltransferase babsha bound with udp and l-malate 0.8598 4 389
4xsp-assembly1.cif.gz_A crystal structure of anabaena alr3699/hepe in complex with udp 0.8588 1 383
ID Description Score Start End Superfamily
5d00A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9414 199 363 3.40.50.2000
af_Q2G0L3_321_481_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9412 217 368 3.40.50.2000
af_P96407_190_356_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9305 211 367 3.40.50.2000
af_Q9SSP6_536_651_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.926 262 371 3.40.50.2000
af_Q2G290_1_180_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9242 1 186 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A2S8M679-F1-model_v4 deleted 0.9717 271 387
AF-X1J4L4-F1-model_v4 Glycosyl transferase family 1 domain-containing protein 0.9608 245 387 GO:0016757
AF-D9PMD1-F1-model_v4 Protein containing Glycosyl transferase, group 1 domain (EC 2.4.-.-) 0.9539 279 388 GO:0016757
AF-X1I0G9-F1-model_v4 Glycosyl transferase family 1 domain-containing protein 0.9532 245 387 GO:0016757
AF-A0A1W9IZU7-F1-model_v4 Glycosyl transferase family 1 domain-containing protein 0.9531 247 388 GO:0016757

Feature Viewer

pLDDT pTM Quality
92.43 0.88 High
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Predicted Structure (AlphaFold2)

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