F169180

General Info

Members Datasets Scaffolds Average Seq Length
137 92 128 189

Family's Representative Sequence

Representative Sequence 3300005546|Ga0070696_100107890|Ga0070696_1001078903
Length 199
Sequence MSHIELTEGLPGIRGPMVFSPETTKPLGELVQVLLTGPHTLTPAEREMIATYVSSENDCYYCLTCHGSTAAQHLGGADSDYELIFQIKHNYEAAPLSAKMKALLAIAGKVQKGGKHVTAKDVERARGQGATDKEIHDTVLIAAAFCMFNRYVDGLDTWQPRDPEIYREIGQQTARLGYVGRDYHKPLQAIASKQNKSKS

Samples

Sample ID Description Type Environment
1 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
2 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
3 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
4 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
5 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
6 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
7 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
8 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
9 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
10 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
11 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
12 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
13 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
14 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
15 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
16 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
17 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
18 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
19 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
20 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
25 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
26 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
27 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
28 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
29 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
30 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
31 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
32 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
35 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
36 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
37 3300022734 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU3 Metagenome Rhizosphere
38 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
39 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
63 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
64 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
65 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
66 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
67 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
68 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
69 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
70 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
71 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
72 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
73 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
74 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
75 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
76 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
77 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
78 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
79 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
80 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
81 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
82 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
83 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
84 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
85 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
86 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
87 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
89 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
91 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
92 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.62
Metatranscriptomes 3.65
Isolates 0.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 6.57
Rhizosphere 89.05
Stem 0
Stem Tuber 0
Unclassified 4.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068869_100413810 3300005334 Bacteria 1111
2 Ga0070675_100172054 3300005354 Bacteria 1868
3 Ga0070710_10056860 3300005437 Bacteria 2215
4 Ga0070711_100132186 3300005439 Bacteria 1860
5 Ga0070678_100220683 3300005456 Bacteria 1575
6 Ga0070685_10215435 3300005466 Bacteria 1255
7 Ga0070695_100254700 3300005545 Bacteria 1279
8 Ga0070695_100358606 3300005545 Bacteria 1094
9 Ga0070696_100107890 3300005546 Bacteria 2003
10 Ga0070693_100203914 3300005547 Bacteria 1286
11 Ga0070665_100003360 3300005548 Bacteria 17112
12 Ga0070665_100160510 3300005548 Bacteria 2250
13 Ga0068854_100044476 3300005578 Bacteria 3152
14 Ga0068854_100414712 3300005578 Bacteria 1117
15 Ga0068852_100861166 3300005616 Bacteria 922
16 Ga0068859_100101434 3300005617 Bacteria 2935
17 Ga0068864_100221126 3300005618 Bacteria 1747
18 Ga0068860_100361935 3300005843 Bacteria 1429
19 Ga0068860_100674810 3300005843 Bacteria 1042
20 Ga0070716_100318198 3300006173 Bacteria 1089
21 Ga0070712_100579066 3300006175 Bacteria 948
22 Ga0097621_100003336 3300006237 Bacteria 11046
23 Ga0097621_100057191 3300006237 Bacteria 3188
24 Ga0068871_100000357 3300006358 Bacteria 31829
25 Ga0068871_100026051 3300006358 Bacteria 4558
26 Ga0068871_100087498 3300006358 Bacteria 2590
27 Ga0097620_100101440 3300006931 Bacteria 2935
28 Ga0099794_10184086 3300007265 Bacteria 1067
29 Ga0099794_10499191 3300007265 Bacteria 640
30 Ga0105240_10372578 3300009093 Bacteria 1614
31 Ga0111539_10248907 3300009094 Bacteria 2069
32 Ga0111539_10485664 3300009094 Bacteria 1439
33 Ga0105245_10000759 3300009098 Bacteria 29195
34 Ga0105245_10314649 3300009098 Bacteria 1540
35 Ga0105245_10814492 3300009098 Bacteria 972
36 Ga0105241_11164291 3300009174 Bacteria 729
37 Ga0105242_10810346 3300009176 Bacteria 928
38 Ga0105242_11549779 3300009176 Bacteria 695
39 Ga0105237_10282188 3300009545 Bacteria 1663
40 Ga0157369_10444337 3300013105 Bacteria 1343
41 Ga0157374_10054234 3300013296 Unclassified 3739
42 Ga0157374_10994534 3300013296 Bacteria 858
43 Ga0157378_10002505 3300013297 Bacteria 16346
44 Ga0157378_10070161 3300013297 Bacteria 3145
45 Ga0163162_10161687 3300013306 Bacteria 2361
46 Ga0163162_10560766 3300013306 Unclassified 1270
47 Ga0163162_11054813 3300013306 Bacteria 920
48 Ga0163162_11602008 3300013306 Unclassified 743
49 Ga0157375_10063240 3300013308 Bacteria 3681
50 Ga0157375_11669027 3300013308 Unclassified 754
51 Ga0163163_10159445 3300014325 Unclassified 2301
52 Ga0157379_10028175 3300014968 Bacteria 5000
53 Ga0157376_10022763 3300014969 Unclassified 4891
54 Ga0213876_10084242 3300021384 Bacteria 1682
55 Ga0224571_100778 3300022734 Bacteria 1874
56 Ga0228598_1003353 3300024227 Bacteria 3447
57 Ga0207692_10041006 3300025898 Bacteria 2289
58 Ga0207680_10668470 3300025903 Bacteria 744
59 Ga0207705_10138288 3300025909 Bacteria 1817
60 Ga0207654_10543016 3300025911 Bacteria 825
61 Ga0207695_10001869 3300025913 Bacteria 32967
62 Ga0207671_10163387 3300025914 Bacteria 1725
63 Ga0207693_10572099 3300025915 Bacteria 880
64 Ga0207694_10002020 3300025924 Bacteria 16808
65 Ga0207687_10031736 3300025927 Bacteria 3573
66 Ga0207687_10250017 3300025927 Bacteria 1409
67 Ga0207687_10301527 3300025927 Bacteria 1291
68 Ga0207687_11210392 3300025927 Bacteria 649
69 Ga0207644_10170556 3300025931 Bacteria 1698
70 Ga0207686_10018405 3300025934 Unclassified 3955
71 Ga0207686_10332336 3300025934 Bacteria 1139
72 Ga0207686_11203649 3300025934 Bacteria 620
73 Ga0207665_10276842 3300025939 Bacteria 1248
74 Ga0207711_10003108 3300025941 Bacteria 14475
75 Ga0207689_10249319 3300025942 Bacteria 1468
76 Ga0207640_10474861 3300025981 Bacteria 1036
77 Ga0207677_10061789 3300026023 Bacteria 2596
78 Ga0207677_10739817 3300026023 Bacteria 876
79 Ga0207703_10504310 3300026035 Bacteria 1136
80 Ga0207678_10104959 3300026067 Bacteria 2411
81 Ga0207648_11140750 3300026089 Bacteria 731
82 Ga0207676_10128991 3300026095 Bacteria 2147
83 Ga0207683_10080383 3300026121 Bacteria 2892
84 Ga0268266_10022291 3300028379 Bacteria 5398
85 Ga0268266_10060810 3300028379 Bacteria 3257
86 Ga0268264_10332727 3300028381 Bacteria 1440
87 Ga0265338_10005534 3300028800 Bacteria 16446
88 Ga0265338_10016427 3300028800 Bacteria 8056
89 Ga0265324_10030800 3300029957 Bacteria 1881
90 Ga0265762_1000277 3300030760 Bacteria 8549
91 Ga0265762_1075802 3300030760 Bacteria 713
92 Ga0265770_1023864 3300030878 Bacteria 987
93 Ga0265760_10008659 3300031090 Bacteria 2907
94 Ga0265760_10074713 3300031090 Unclassified 1043
95 Ga0265330_10002591 3300031235 Bacteria 9822
96 Ga0265320_10003743 3300031240 Bacteria 10121
97 Ga0265329_10163356 3300031242 Unclassified 725
98 Ga0265339_10105701 3300031249 Bacteria 1461
99 Ga0265331_10007842 3300031250 Bacteria 6124
100 Ga0265331_10155607 3300031250 Bacteria 1037
101 Ga0265316_10002624 3300031344 Bacteria 18530
102 Ga0265316_10048708 3300031344 Bacteria 3343
103 Ga0265316_10098331 3300031344 Bacteria 2227
104 Ga0265316_10106421 3300031344 Bacteria 2127
105 Ga0265313_10002565 3300031595 Bacteria 15508
106 Ga0265314_10007143 3300031711 Bacteria 9731
107 Ga0265314_10015441 3300031711 Bacteria 6060
108 Ga0265314_10057562 3300031711 Bacteria 2668
109 Ga0316212_1015951 3300033547 Unclassified 1061
110 Ga0373935_0194889 3300035692 Bacteria 1397
111 Ga0436365_0148150 3300039437 Bacteria 2435
112 Ga0436363_1661560 3300039450 Bacteria 3331
113 Ga0495669_0016908 3300046684 Bacteria 3129
114 Ga0495683_0321279 3300047323 Bacteria 660
115 Ga0496101_0071485 3300048904 Bacteria 2544
116 Ga0496102_0002845 3300048905 Bacteria 14701
117 Ga0496102_0041668 3300048905 Bacteria 4159
118 Ga0496103_0107313 3300048906 Unclassified 1771
119 Ga0496104_0197550 3300048907 Bacteria 1923
120 Ga0496106_0034532 3300048909 Bacteria 3778
121 Ga0496106_0044001 3300048909 Unclassified 3352
122 Ga0496118_0169364 3300048921 Unclassified 1337
123 Ga0501047_0072622 3300049581 Bacteria 3312
124 Ga0501047_0582928 3300049581 Unclassified 941
125 Ga0501083_0309645 3300049744 Bacteria 1027
126 Ga0501035_0262346 3300049822 Bacteria 1464
127 Ga0501044_0009196 3300049823 Bacteria 10792
128 nmdc:mga08y16_401180_c1 3300050511 Bacteria 1403

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300013105 Ga0157369_10444337 Ga0157369_104443373 162
2 3300031344 Ga0265316_10106421 Ga0265316_101064212 164
3 3300031711 Ga0265314_10015441 Ga0265314_100154412 164
4 3300025934 Ga0207686_11203649 Ga0207686_112036491 169
5 3300022734 Ga0224571_100778 Ga0224571_1007782 170
6 3300025909 Ga0207705_10138288 Ga0207705_101382882 171
7 3300005437 Ga0070710_10056860 Ga0070710_100568601 172
8 3300006175 Ga0070712_100579066 Ga0070712_1005790662 172
9 3300025915 Ga0207693_10572099 Ga0207693_105720992 172
10 3300049581 Ga0501047_0582928 Ga0501047_0582928_379_906 172
11 3300050511 nmdc:mga08y16_401180_c1 nmdc:mga08y16_401180_c1_686_1204 172
12 3300013308 Ga0157375_11669027 Ga0157375_116690271 179
13 3300026089 Ga0207648_11140750 Ga0207648_111407502 182
14 iso_pu_bacteria 8055066027 8055066652 182
15 3300005548 Ga0070665_100160510 Ga0070665_1001605102 183
16 3300028379 Ga0268266_10060810 Ga0268266_100608101 183
17 3300005547 Ga0070693_100203914 Ga0070693_1002039142 184
18 3300009094 Ga0111539_10248907 Ga0111539_102489072 184
19 3300031595 Ga0265313_10002565 Ga0265313_100025659 184
20 3300035692 Ga0373935_0194889 Ga0373935_0194889_705_1259 184
21 3300049581 Ga0501047_0072622 Ga0501047_0072622_116_673 184
22 3300049822 Ga0501035_0262346 Ga0501035_0262346_42_599 184
23 3300049823 Ga0501044_0009196 Ga0501044_0009196_393_950 184
24 3300006237 Ga0097621_100057191 Ga0097621_1000571913 185
25 3300006358 Ga0068871_100026051 Ga0068871_1000260513 185
26 3300009176 Ga0105242_10810346 Ga0105242_108103461 185
27 3300013296 Ga0157374_10054234 Ga0157374_100542343 185
28 3300014325 Ga0163163_10159445 Ga0163163_101594453 185
29 3300024227 Ga0228598_1003353 Ga0228598_10033533 185
30 3300025934 Ga0207686_10018405 Ga0207686_100184054 185
31 3300025934 Ga0207686_10332336 Ga0207686_103323362 185
32 3300026035 Ga0207703_10504310 Ga0207703_105043102 185
33 3300031090 Ga0265760_10008659 Ga0265760_100086592 185
34 3300005354 Ga0070675_100172054 Ga0070675_1001720542 186
35 3300005456 Ga0070678_100220683 Ga0070678_1002206832 186
36 3300005466 Ga0070685_10215435 Ga0070685_102154352 186
37 3300005618 Ga0068864_100221126 Ga0068864_1002211261 186
38 3300005843 Ga0068860_100674810 Ga0068860_1006748101 186
39 3300007265 Ga0099794_10499191 Ga0099794_104991911 186
40 3300009176 Ga0105242_11549779 Ga0105242_115497791 186
41 3300013306 Ga0163162_10161687 Ga0163162_101616872 186
42 3300013308 Ga0157375_10063240 Ga0157375_100632402 186
43 3300025903 Ga0207680_10668470 Ga0207680_106684701 186
44 3300025927 Ga0207687_11210392 Ga0207687_112103921 186
45 3300026095 Ga0207676_10128991 Ga0207676_101289911 186
46 3300026121 Ga0207683_10080383 Ga0207683_100803833 186
47 3300031242 Ga0265329_10163356 Ga0265329_101633561 186
48 3300031249 Ga0265339_10105701 Ga0265339_101057011 186
49 3300039450 Ga0436363_1661560 Ga0436363_1661560_2655_3215 186
50 3300048904 Ga0496101_0071485 Ga0496101_0071485_749_1324 186
51 3300005545 Ga0070695_100358606 Ga0070695_1003586062 187
52 3300009093 Ga0105240_10372578 Ga0105240_103725782 187
53 3300013296 Ga0157374_10994534 Ga0157374_109945342 187
54 3300013297 Ga0157378_10070161 Ga0157378_100701612 187
55 3300013306 Ga0163162_10560766 Ga0163162_105607661 187
56 3300013306 Ga0163162_11602008 Ga0163162_116020081 187
57 3300026023 Ga0207677_10739817 Ga0207677_107398172 187
58 3300031250 Ga0265331_10155607 Ga0265331_101556072 187
59 3300031344 Ga0265316_10002624 Ga0265316_100026248 187
60 3300031344 Ga0265316_10106421 Ga0265316_101064213 187
61 3300048905 Ga0496102_0002845 Ga0496102_0002845_9551_10114 187
62 3300048906 Ga0496103_0107313 Ga0496103_0107313_271_834 187
63 3300048909 Ga0496106_0044001 Ga0496106_0044001_989_1552 187
64 3300005334 Ga0068869_100413810 Ga0068869_1004138101 188
65 3300005439 Ga0070711_100132186 Ga0070711_1001321862 188
66 3300005545 Ga0070695_100254700 Ga0070695_1002547002 188
67 3300005546 Ga0070696_100107890 Ga0070696_1001078902 188
68 3300005546 Ga0070696_100107890 Ga0070696_1001078903 188
69 3300005548 Ga0070665_100003360 Ga0070665_1000033604 188
70 3300005578 Ga0068854_100044476 Ga0068854_1000444762 188
71 3300005578 Ga0068854_100414712 Ga0068854_1004147122 188
72 3300005616 Ga0068852_100861166 Ga0068852_1008611661 188
73 3300005617 Ga0068859_100101434 Ga0068859_1001014342 188
74 3300005843 Ga0068860_100361935 Ga0068860_1003619352 188
75 3300006173 Ga0070716_100318198 Ga0070716_1003181982 188
76 3300006237 Ga0097621_100003336 Ga0097621_1000033362 188
77 3300006237 Ga0097621_100057191 Ga0097621_1000571914 188
78 3300006358 Ga0068871_100000357 Ga0068871_10000035729 188
79 3300006358 Ga0068871_100026051 Ga0068871_1000260512 188
80 3300006358 Ga0068871_100087498 Ga0068871_1000874982 188
81 3300006931 Ga0097620_100101440 Ga0097620_1001014402 188
82 3300007265 Ga0099794_10184086 Ga0099794_101840862 188
83 3300009094 Ga0111539_10485664 Ga0111539_104856642 188
84 3300009098 Ga0105245_10000759 Ga0105245_1000075914 188
85 3300009098 Ga0105245_10314649 Ga0105245_103146492 188
86 3300009098 Ga0105245_10814492 Ga0105245_108144921 188
87 3300009174 Ga0105241_11164291 Ga0105241_111642912 188
88 3300009545 Ga0105237_10282188 Ga0105237_102821882 188
89 3300013297 Ga0157378_10002505 Ga0157378_1000250511 188
90 3300013306 Ga0163162_11054813 Ga0163162_110548132 188
91 3300014968 Ga0157379_10028175 Ga0157379_100281753 188
92 3300014969 Ga0157376_10022763 Ga0157376_100227633 188
93 3300021384 Ga0213876_10084242 Ga0213876_100842422 188
94 3300025898 Ga0207692_10041006 Ga0207692_100410061 188
95 3300025911 Ga0207654_10543016 Ga0207654_105430162 188
96 3300025913 Ga0207695_10001869 Ga0207695_1000186921 188
97 3300025914 Ga0207671_10163387 Ga0207671_101633873 188
98 3300025924 Ga0207694_10002020 Ga0207694_100020208 188
99 3300025927 Ga0207687_10031736 Ga0207687_100317362 188
100 3300025927 Ga0207687_10250017 Ga0207687_102500172 188
101 3300025927 Ga0207687_10301527 Ga0207687_103015272 188
102 3300025931 Ga0207644_10170556 Ga0207644_101705563 188
103 3300025939 Ga0207665_10276842 Ga0207665_102768422 188
104 3300025941 Ga0207711_10003108 Ga0207711_100031081 188
105 3300025942 Ga0207689_10249319 Ga0207689_102493192 188
106 3300025981 Ga0207640_10474861 Ga0207640_104748611 188
107 3300026023 Ga0207677_10061789 Ga0207677_100617892 188
108 3300026067 Ga0207678_10104959 Ga0207678_101049592 188
109 3300028379 Ga0268266_10022291 Ga0268266_100222914 188
110 3300028381 Ga0268264_10332727 Ga0268264_103327272 188
111 3300028800 Ga0265338_10005534 Ga0265338_100055348 188
112 3300028800 Ga0265338_10016427 Ga0265338_100164276 188
113 3300029957 Ga0265324_10030800 Ga0265324_100308003 188
114 3300030760 Ga0265762_1000277 Ga0265762_10002772 188
115 3300030760 Ga0265762_1075802 Ga0265762_10758021 188
116 3300030878 Ga0265770_1023864 Ga0265770_10238641 188
117 3300031090 Ga0265760_10074713 Ga0265760_100747132 188
118 3300031235 Ga0265330_10002591 Ga0265330_100025912 188
119 3300031240 Ga0265320_10003743 Ga0265320_1000374310 188
120 3300031250 Ga0265331_10007842 Ga0265331_100078424 188
121 3300031344 Ga0265316_10002624 Ga0265316_100026247 188
122 3300031344 Ga0265316_10048708 Ga0265316_100487083 188
123 3300031344 Ga0265316_10098331 Ga0265316_100983313 188
124 3300031711 Ga0265314_10007143 Ga0265314_100071433 188
125 3300031711 Ga0265314_10007143 Ga0265314_100071434 188
126 3300031711 Ga0265314_10057562 Ga0265314_100575623 188
127 3300033547 Ga0316212_1015951 Ga0316212_10159511 188
128 3300039437 Ga0436365_0148150 Ga0436365_0148150_178_777 188
129 3300046684 Ga0495669_0016908 Ga0495669_0016908_1924_2508 188
130 3300047323 Ga0495683_0321279 Ga0495683_0321279_39_638 188
131 3300048905 Ga0496102_0041668 Ga0496102_0041668_2593_3159 188
132 3300048905 Ga0496102_0041668 Ga0496102_0041668_3173_3772 188
133 3300048907 Ga0496104_0197550 Ga0496104_0197550_864_1430 188
134 3300048909 Ga0496106_0034532 Ga0496106_0034532_1400_1966 188
135 3300048909 Ga0496106_0034532 Ga0496106_0034532_787_1386 188
136 3300048921 Ga0496118_0169364 Ga0496118_0169364_115_699 188
137 3300049744 Ga0501083_0309645 Ga0501083_0309645_322_888 188

Structural Annotation

Top 5 Hits

ID Description Score Start End
2pfx-assembly1.cif.gz_A crystal structure of uncharacterized peroxidase-related protein (yp_614459.1) from silicibacter sp. tm1040 at 1.70 a resolution 0.9003 10 164
2prr-assembly1.cif.gz_E crystal structure of alkylhydroperoxidase ahpd core: uncharacterized peroxidase-related protein (yp_296737.1) from ralstonia eutropha jmp134 at 2.15 a resolution 0.8992 10 168
3c1l-assembly1.cif.gz_B crystal structure of an antioxidant defense protein (mlr4105) from mesorhizobium loti maff303099 at 2.00 a resolution 0.8923 10 164
3c1l-assembly2.cif.gz_J crystal structure of an antioxidant defense protein (mlr4105) from mesorhizobium loti maff303099 at 2.00 a resolution 0.8845 10 164
2gmy-assembly1.cif.gz_C crystal structure of a protein of unknown function atu0492 from agrobacterium tumefaciens, putative antioxidant defence protein ahpd 0.8691 12 159
ID Description Score Start End Superfamily
2oyoB02 Mainly Alpha;Up-down Bundle;AhpD-like;AhpD-like 0.8938 41 164 1.20.1290.10
af_A4HXU1_714_811_1.20.1290.10 Mainly Alpha;Up-down Bundle;AhpD-like;AhpD-like 0.8846 19 75 1.20.1290.10
af_P76222_42_172_1.20.1290.10 Mainly Alpha;Up-down Bundle;AhpD-like;AhpD-like 0.8829 27 157 1.20.1290.10
2prrB02 Mainly Alpha;Up-down Bundle;AhpD-like;AhpD-like 0.8766 41 164 1.20.1290.10
2gmyF00 Mainly Alpha;Up-down Bundle;AhpD-like;AhpD-like 0.8658 12 159 1.20.1290.10
ID Description Score Start End GO Terms
AF-A0A7D7XKN8-F1-model_v4 Peroxidase-related enzyme 0.9971 1 179 GO:0051920
AF-A0A3E1NH92-F1-model_v4 Carboxymuconolactone decarboxylase family protein 0.9921 1 175 GO:0051920
AF-A0A1V5QXN1-F1-model_v4 Carboxymuconolactone decarboxylase family protein 0.9908 1 175 GO:0051920
AF-A0A6B3PKQ1-F1-model_v4 deleted 0.9907 1 175
AF-A0A7X6L4Q8-F1-model_v4 Carboxymuconolactone decarboxylase 0.9885 1 175 GO:0051920

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pLDDT pTM Quality
95.27 0.92 High
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Predicted Structure (AlphaFold2)

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