F167859

General Info

Members Datasets Scaffolds Average Seq Length
136 101 133 490

Family's Representative Sequence

Representative Sequence 3300049459|Ga0495678_000002|Ga0495678_000002_556051_557721
Length 556
Sequence MRQGLFFCRWNFSTASSYGGALWYDLLPNSQPAVQRPATYRITMQKIFAYVVAAVIGVGGIQASAGAAVADRHLTPETSAALERISADSLRGHLSFIASDLLEGRGTPSRGQDLAAEYIAAQFRRAGLEAVGDDGYFQTANWTYAETNLKDFSFRLDTGKQQLSVPANLLSFSLAQALTLAPSAIVKIDAADAAALAAQTPATLAGKVIVTNLPDFGAMPPEQSKAARKGWQAFNANVTKLRPALLLIVDRAKAAGNAGGSGRLIDPESSGETVSTVPRMTIHSAPAIRALDALPAGGGARLSVNVAAPVELPVKLRNVIGVLRGSDPVLKNTYVMVTAHYDHLGIRNGVIHNGANDDGSGTVSVMEIAGALAGMKQRPARSIVFMTVFGEELGLFGSRYYGRHPIVPIKQTVADINLEQVGRTDSSEGPQLNNASMTGFDFSDVGKVFQKAGKLTGIDVYKNEANSDFYFGLSDNQALADHGVPAHTLCVAYEYPDYHAPGDDWEKVDYANMAKVNRMVALGVLLIANDPVAPKWNTANPLTKPYVEAWRRQSGQ

Samples

Sample ID Description Type Environment
1 2808606418 Herbaspirillum sp. SJZ107 Isolate Rhizosphere
2 2857553236 Duganella sp. R-74557 Isolate Unclassified
3 2889415604 Paludisphaera rhizosphaerae JC665 Isolate Rhizosphere
4 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
8 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
9 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
10 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
11 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
12 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
13 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
14 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
15 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
16 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
18 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
19 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
20 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
22 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
24 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
26 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
27 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
28 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
29 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
30 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
31 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
32 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
33 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
34 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
35 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
36 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
37 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
46 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
47 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
49 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
50 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
51 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
52 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
53 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
54 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
55 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
56 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
57 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
58 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
59 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
60 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
61 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
62 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
63 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
64 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
65 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
66 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
67 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
68 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
69 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
70 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
71 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
72 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
73 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
74 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
75 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
76 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
77 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
78 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
79 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
80 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
81 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
82 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
83 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
84 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
85 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
86 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
87 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
88 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
89 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
90 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
91 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
92 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
93 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
94 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
95 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
96 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
97 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
98 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
99 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
100 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
101 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.79
Metatranscriptomes 0
Isolates 2.21

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0.74
Rhizoplane 1.47
Rhizosphere 92.65
Stem 0
Stem Tuber 0
Unclassified 5.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070673_100078990 3300005364 Bacteria 2663
2 Ga0070713_100009825 3300005436 Bacteria 6881
3 Ga0070708_100018991 3300005445 Bacteria 5765
4 Ga0070699_100134440 3300005518 Bacteria 2181
5 Ga0070679_100214454 3300005530 Unclassified 1888
6 Ga0070684_100049119 3300005535 Bacteria 3661
7 Ga0070697_100100873 3300005536 Unclassified 2398
8 Ga0070696_100001210 3300005546 Bacteria 16756
9 Ga0068859_100172293 3300005617 Unclassified 2245
10 Ga0068859_100253489 3300005617 Bacteria 1850
11 Ga0068861_100170947 3300005719 Bacteria 1801
12 Ga0068858_100041431 3300005842 Bacteria 4269
13 Ga0068862_100147236 3300005844 Bacteria 2094
14 Ga0081539_10003797 3300005985 Bacteria 17799
15 Ga0075428_100004834 3300006844 Bacteria 14951
16 Ga0075431_100001635 3300006847 Bacteria 20952
17 Ga0075436_100002867 3300006914 Bacteria 11813
18 Ga0097620_100172298 3300006931 Unclassified 2245
19 Ga0097620_100253481 3300006931 Bacteria 1850
20 Ga0105240_10000349 3300009093 Bacteria 86505
21 Ga0105240_10259229 3300009093 Bacteria 2007
22 Ga0111539_10004592 3300009094 Bacteria 18043
23 Ga0111539_10013922 3300009094 Bacteria 10056
24 Ga0111539_10135850 3300009094 Unclassified 2880
25 Ga0105245_10014059 3300009098 Bacteria 6972
26 Ga0114129_10230794 3300009147 Bacteria 2493
27 Ga0105248_10166756 3300009177 Unclassified 2482
28 Ga0105237_10073626 3300009545 Bacteria 3408
29 Ga0105239_10131097 3300010375 Bacteria 2788
30 Ga0157371_10000128 3300013102 Bacteria 116349
31 Ga0157378_10061285 3300013297 Bacteria 3357
32 Ga0157372_10113494 3300013307 Bacteria 3105
33 Ga0157375_10137517 3300013308 Bacteria 2568
34 Ga0157380_10056582 3300014326 Bacteria 3120
35 Ga0157376_10005214 3300014969 Bacteria 9068
36 Ga0182006_1000043 3300015261 Bacteria 200870
37 Ga0182005_1000196 3300015265 Bacteria 41024
38 Ga0213876_10001698 3300021384 Bacteria 13405
39 Ga0207705_10060247 3300025909 Unclassified 2741
40 Ga0207707_10002129 3300025912 Bacteria 17925
41 Ga0207695_10005025 3300025913 Bacteria 17763
42 Ga0207671_10091296 3300025914 Bacteria 2295
43 Ga0207652_10179702 3300025921 Unclassified 1901
44 Ga0207661_10011610 3300025944 Bacteria 6391
45 Ga0207651_10097283 3300025960 Bacteria 2173
46 Ga0207703_10034988 3300026035 Bacteria 3990
47 Ga0209281_1006972 3300027111 Bacteria 2872
48 Ga0207428_10005771 3300027907 Bacteria 11490
49 Ga0207428_10034188 3300027907 Bacteria 4168
50 Ga0268266_10214053 3300028379 Bacteria 1768
51 Ga0265323_10001535 3300028653 Bacteria 11202
52 Ga0265316_10058541 3300031344 Bacteria 3000
53 Ga0265313_10008628 3300031595 Bacteria 6742
54 Ga0265314_10006490 3300031711 Bacteria 10344
55 Ga0265342_10092515 3300031712 Bacteria 1732
56 Ga0373935_0041679 3300035692 Bacteria 2885
57 Ga0373927_0005339 3300035695 Bacteria 8882
58 Ga0373927_0022364 3300035695 Bacteria 4142
59 Ga0373937_0006195 3300036401 Bacteria 10303
60 Ga0373937_0008543 3300036401 Bacteria 8897
61 Ga0373937_0098293 3300036401 Unclassified 2715
62 Ga0373937_0223262 3300036401 Bacteria 1774
63 Ga0373925_0059028 3300037068 Bacteria 2877
64 Ga0436365_0170429 3300039437 Bacteria 2130
65 Ga0436365_0815906 3300039437 Bacteria 101407
66 Ga0453683_0028073 3300044673 Bacteria 3565
67 Ga0451576_0061560 3300045051 Unclassified 3914
68 Ga0451576_0085552 3300045051 Bacteria 3280
69 Ga0495627_000005 3300046453 Bacteria 630805
70 Ga0495651_0069628 3300046462 Bacteria 2679
71 Ga0495650_0001033 3300046471 Bacteria 31238
72 Ga0495580_0001231 3300046472 Bacteria 22586
73 Ga0495580_0007204 3300046472 Bacteria 8951
74 Ga0495605_0000144 3300046474 Bacteria 91642
75 Ga0495605_0009913 3300046474 Bacteria 5341
76 Ga0495605_0012604 3300046474 Bacteria 4681
77 Ga0495596_0001125 3300046500 Bacteria 15781
78 Ga0495607_0001358 3300046501 Bacteria 21811
79 Ga0495583_0000665 3300046506 Bacteria 45049
80 Ga0495632_0002358 3300046519 Bacteria 14463
81 Ga0495632_0009986 3300046519 Bacteria 5662
82 Ga0495643_0001382 3300046522 Bacteria 22685
83 Ga0495643_0023177 3300046522 Bacteria 3531
84 Ga0495644_0002523 3300046523 Bacteria 7296
85 Ga0495642_0019681 3300046528 Bacteria 2647
86 Ga0495652_0040075 3300046529 Bacteria 4049
87 Ga0495652_0068452 3300046529 Bacteria 2974
88 Ga0495587_0045612 3300046536 Unclassified 2605
89 Ga0495587_0056489 3300046536 Bacteria 2310
90 Ga0495609_0000229 3300046538 Bacteria 53704
91 Ga0495609_0000901 3300046538 Bacteria 21675
92 Ga0495645_0163391 3300046543 Bacteria 1538
93 Ga0495633_0012637 3300046558 Bacteria 4481
94 Ga0495611_0012556 3300046648 Bacteria 3601
95 Ga0495661_0001125 3300046665 Bacteria 23388
96 Ga0495661_0069782 3300046665 Bacteria 2058
97 Ga0495669_0003186 3300046684 Bacteria 6757
98 Ga0495613_0023125 3300046689 Bacteria 4632
99 Ga0495613_0158542 3300046689 Bacteria 1611
100 Ga0495670_0034929 3300046691 Bacteria 2505
101 Ga0495589_0046459 3300046794 Bacteria 2155
102 Ga0495660_0000595 3300046810 Bacteria 28592
103 Ga0495674_0002318 3300047319 Bacteria 18689
104 Ga0495674_0106667 3300047319 Bacteria 2379
105 Ga0495674_0113824 3300047319 Bacteria 2291
106 Ga0495672_0000850 3300047320 Bacteria 32446
107 Ga0495672_0039850 3300047320 Bacteria 2854
108 Ga0495683_0004483 3300047323 Bacteria 7917
109 Ga0495683_0058642 3300047323 Bacteria 1911
110 Ga0495677_0016739 3300047445 Bacteria 2659
111 Ga0495677_0026513 3300047445 Bacteria 2102
112 Ga0495677_0028228 3300047445 Bacteria 2037
113 Ga0495679_003898 3300047446 Bacteria 7055
114 Ga0495681_0001163 3300047470 Bacteria 19953
115 Ga0495684_0014270 3300047471 Bacteria 6113
116 Ga0495684_0046049 3300047471 Bacteria 3337
117 Ga0495684_0051709 3300047471 Bacteria 3135
118 Ga0495602_0052818 3300048088 Unclassified 3606
119 Ga0495626_0000009 3300048091 Bacteria 270596
120 Ga0495626_0003594 3300048091 Bacteria 9862
121 Ga0495626_0038245 3300048091 Bacteria 2275
122 Ga0496112_0082008 3300048915 Bacteria 3190
123 Ga0496115_0011239 3300048918 Bacteria 6709
124 Ga0496124_0031499 3300048927 Bacteria 4694
125 Ga0496124_0074292 3300048927 Bacteria 2810
126 Ga0496126_0002465 3300048929 Bacteria 24936
127 Ga0495678_000002 3300049459 Bacteria 999613
128 Ga0495678_032087 3300049459 Bacteria 2182
129 nmdc:mga06r32_10276_c1 3300050510 Bacteria 8445
130 nmdc:mga08y16_1160_c1 3300050511 Bacteria 25976
131 nmdc:mga08y16_15040_c1 3300050511 Bacteria 7750
132 nmdc:mga08x19_20526_c1 3300050514 Bacteria 4068
133 nmdc:mga0a205_99160_c1 3300050515 Bacteria 2811

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048091 Ga0495626_0038245 Ga0495626_0038245_1088_2260 373
2 3300046543 Ga0495645_0163391 Ga0495645_0163391_311_1522 384
3 3300036401 Ga0373937_0223262 Ga0373937_0223262_22_1329 404
4 3300046529 Ga0495652_0040075 Ga0495652_0040075_1200_2594 433
5 3300046536 Ga0495587_0045612 Ga0495587_0045612_551_1945 433
6 3300047471 Ga0495684_0014270 Ga0495684_0014270_1175_2569 433
7 3300048088 Ga0495602_0052818 Ga0495602_0052818_1626_3020 433
8 3300036401 Ga0373937_0006195 Ga0373937_0006195_2163_3500 437
9 3300046462 Ga0495651_0069628 Ga0495651_0069628_532_1869 437
10 3300013307 Ga0157372_10113494 Ga0157372_101134942 445
11 3300014969 Ga0157376_10005214 Ga0157376_100052146 445
12 3300046472 Ga0495580_0001231 Ga0495580_0001231_13579_14973 445
13 3300045051 Ga0451576_0061560 Ga0451576_0061560_1931_3382 448
14 3300048091 Ga0495626_0000009 Ga0495626_0000009_154660_156117 448
15 3300046522 Ga0495643_0001382 Ga0495643_0001382_2282_3685 450
16 3300010375 Ga0105239_10131097 Ga0105239_101310973 452
17 3300005530 Ga0070679_100214454 Ga0070679_1002144541 453
18 3300025921 Ga0207652_10179702 Ga0207652_101797022 453
19 3300046665 Ga0495661_0069782 Ga0495661_0069782_602_2002 453
20 3300005535 Ga0070684_100049119 Ga0070684_1000491193 455
21 3300025914 Ga0207671_10091296 Ga0207671_100912962 455
22 3300031344 Ga0265316_10058541 Ga0265316_100585412 456
23 3300031712 Ga0265342_10092515 Ga0265342_100925152 456
24 3300009094 Ga0111539_10004592 Ga0111539_100045925 457
25 3300009098 Ga0105245_10014059 Ga0105245_100140598 457
26 3300009545 Ga0105237_10073626 Ga0105237_100736262 457
27 3300044673 Ga0453683_0028073 Ga0453683_0028073_589_2163 459
28 3300005436 Ga0070713_100009825 Ga0070713_1000098257 460
29 3300046501 Ga0495607_0001358 Ga0495607_0001358_14952_16397 460
30 3300046519 Ga0495632_0002358 Ga0495632_0002358_5488_6933 460
31 3300046665 Ga0495661_0001125 Ga0495661_0001125_17939_19384 460
32 3300047445 Ga0495677_0016739 Ga0495677_0016739_1163_2608 460
33 3300046453 Ga0495627_000005 Ga0495627_000005_614556_616097 461
34 3300046810 Ga0495660_0000595 Ga0495660_0000595_16563_18104 461
35 3300005617 Ga0068859_100172293 Ga0068859_1001722932 462
36 3300006931 Ga0097620_100172298 Ga0097620_1001722982 462
37 3300035695 Ga0373927_0005339 Ga0373927_0005339_4795_6216 462
38 3300009093 Ga0105240_10000349 Ga0105240_1000034983 463
39 3300025913 Ga0207695_10005025 Ga0207695_1000502512 463
40 3300031711 Ga0265314_10006490 Ga0265314_100064906 464
41 3300025944 Ga0207661_10011610 Ga0207661_100116106 466
42 iso_pu_bacteria 2808606418 2809142191 466
43 3300046471 Ga0495650_0001033 Ga0495650_0001033_13340_14785 467
44 3300046474 Ga0495605_0012604 Ga0495605_0012604_2983_4428 467
45 3300046500 Ga0495596_0001125 Ga0495596_0001125_2951_4396 467
46 3300046538 Ga0495609_0000901 Ga0495609_0000901_13423_14868 467
47 3300047320 Ga0495672_0000850 Ga0495672_0000850_13326_14771 467
48 3300047323 Ga0495683_0058642 Ga0495683_0058642_123_1568 467
49 3300048927 Ga0496124_0074292 Ga0496124_0074292_257_1714 468
50 3300013102 Ga0157371_10000128 Ga0157371_1000012884 469
51 3300036401 Ga0373937_0098293 Ga0373937_0098293_742_2187 469
52 3300046474 Ga0495605_0009913 Ga0495605_0009913_1927_3393 469
53 3300046506 Ga0495583_0000665 Ga0495583_0000665_11684_13162 469
54 3300046519 Ga0495632_0009986 Ga0495632_0009986_406_1884 469
55 3300046522 Ga0495643_0023177 Ga0495643_0023177_1831_3297 469
56 3300046523 Ga0495644_0002523 Ga0495644_0002523_1303_2781 469
57 3300046528 Ga0495642_0019681 Ga0495642_0019681_1151_2629 469
58 3300046558 Ga0495633_0012637 Ga0495633_0012637_626_2104 469
59 3300046648 Ga0495611_0012556 Ga0495611_0012556_987_2465 469
60 3300046684 Ga0495669_0003186 Ga0495669_0003186_212_1690 469
61 3300046691 Ga0495670_0034929 Ga0495670_0034929_491_1969 469
62 3300046794 Ga0495589_0046459 Ga0495589_0046459_604_2082 469
63 3300047320 Ga0495672_0039850 Ga0495672_0039850_1050_2528 469
64 3300047323 Ga0495683_0004483 Ga0495683_0004483_4059_5537 469
65 3300047445 Ga0495677_0026513 Ga0495677_0026513_131_1609 469
66 3300047445 Ga0495677_0028228 Ga0495677_0028228_429_1907 469
67 3300047446 Ga0495679_003898 Ga0495679_003898_1608_3086 469
68 3300047470 Ga0495681_0001163 Ga0495681_0001163_5627_7105 469
69 3300048091 Ga0495626_0003594 Ga0495626_0003594_3276_4754 469
70 3300049459 Ga0495678_032087 Ga0495678_032087_552_2030 469
71 3300005518 Ga0070699_100134440 Ga0070699_1001344402 470
72 3300005546 Ga0070696_100001210 Ga0070696_1000012106 470
73 3300025912 Ga0207707_10002129 Ga0207707_1000212911 470
74 3300031595 Ga0265313_10008628 Ga0265313_100086282 470
75 3300005536 Ga0070697_100100873 Ga0070697_1001008733 471
76 3300005617 Ga0068859_100253489 Ga0068859_1002534892 471
77 3300006931 Ga0097620_100253481 Ga0097620_1002534812 471
78 3300046529 Ga0495652_0068452 Ga0495652_0068452_228_1718 471
79 3300046538 Ga0495609_0000229 Ga0495609_0000229_33019_34560 472
80 3300005445 Ga0070708_100018991 Ga0070708_1000189911 473
81 3300009177 Ga0105248_10166756 Ga0105248_101667562 473
82 3300046536 Ga0495587_0056489 Ga0495587_0056489_226_1713 473
83 3300005842 Ga0068858_100041431 Ga0068858_1000414314 474
84 3300009093 Ga0105240_10259229 Ga0105240_102592292 474
85 3300026035 Ga0207703_10034988 Ga0207703_100349883 474
86 3300028379 Ga0268266_10214053 Ga0268266_102140532 474
87 3300048918 Ga0496115_0011239 Ga0496115_0011239_5176_6657 474
88 iso_pu_bacteria 2889415604 2889420830 474
89 3300013308 Ga0157375_10137517 Ga0157375_101375173 475
90 3300027111 Ga0209281_1006972 Ga0209281_10069722 475
91 3300046689 Ga0495613_0158542 Ga0495613_0158542_54_1550 475
92 3300047319 Ga0495674_0002318 Ga0495674_0002318_10320_11810 475
93 3300047471 Ga0495684_0046049 Ga0495684_0046049_704_2194 475
94 3300048915 Ga0496112_0082008 Ga0496112_0082008_364_1863 475
95 iso_pu_bacteria 2857553236 2857557272 475
96 3300006914 Ga0075436_100002867 Ga0075436_1000028675 476
97 3300015261 Ga0182006_1000043 Ga0182006_1000043104 476
98 3300015265 Ga0182005_1000196 Ga0182005_100019628 476
99 3300035695 Ga0373927_0022364 Ga0373927_0022364_931_2424 476
100 3300039437 Ga0436365_0170429 Ga0436365_0170429_586_2115 476
101 3300047319 Ga0495674_0113824 Ga0495674_0113824_468_1958 476
102 3300048929 Ga0496126_0002465 Ga0496126_0002465_6177_7712 476
103 3300050514 nmdc:mga08x19_20526_c1 nmdc:mga08x19_20526_c1_799_2292 476
104 3300050515 nmdc:mga0a205_99160_c1 nmdc:mga0a205_99160_c1_526_2058 476
105 3300025909 Ga0207705_10060247 Ga0207705_100602472 477
106 3300046474 Ga0495605_0000144 Ga0495605_0000144_61383_62924 477
107 3300048927 Ga0496124_0031499 Ga0496124_0031499_400_1941 477
108 3300049459 Ga0495678_000002 Ga0495678_000002_556051_557721 477
109 3300009094 Ga0111539_10135850 Ga0111539_101358503 478
110 3300013297 Ga0157378_10061285 Ga0157378_100612853 478
111 3300028653 Ga0265323_10001535 Ga0265323_100015356 478
112 3300035692 Ga0373935_0041679 Ga0373935_0041679_362_1858 478
113 3300036401 Ga0373937_0008543 Ga0373937_0008543_3363_4859 478
114 3300037068 Ga0373925_0059028 Ga0373925_0059028_1342_2838 478
115 3300046472 Ga0495580_0007204 Ga0495580_0007204_2119_3615 478
116 3300047319 Ga0495674_0106667 Ga0495674_0106667_331_1827 478
117 3300047471 Ga0495684_0051709 Ga0495684_0051709_618_2114 478
118 3300006847 Ga0075431_100001635 Ga0075431_1000016357 479
119 3300014326 Ga0157380_10056582 Ga0157380_100565822 479
120 3300050510 nmdc:mga06r32_10276_c1 nmdc:mga06r32_10276_c1_6801_8258 479
121 3300039437 Ga0436365_0815906 Ga0436365_0815906_29388_31022 480
122 3300050511 nmdc:mga08y16_15040_c1 nmdc:mga08y16_15040_c1_1680_3215 480
123 3300005719 Ga0068861_100170947 Ga0068861_1001709471 481
124 3300005844 Ga0068862_100147236 Ga0068862_1001472362 481
125 3300005985 Ga0081539_10003797 Ga0081539_100037977 481
126 3300009094 Ga0111539_10013922 Ga0111539_100139222 481
127 3300009147 Ga0114129_10230794 Ga0114129_102307942 481
128 3300027907 Ga0207428_10005771 Ga0207428_100057718 481
129 3300050511 nmdc:mga08y16_1160_c1 nmdc:mga08y16_1160_c1_9009_10661 481
130 3300005364 Ga0070673_100078990 Ga0070673_1000789902 482
131 3300006844 Ga0075428_100004834 Ga0075428_1000048343 482
132 3300021384 Ga0213876_10001698 Ga0213876_100016982 482
133 3300025960 Ga0207651_10097283 Ga0207651_100972832 482
134 3300027907 Ga0207428_10034188 Ga0207428_100341881 482
135 3300045051 Ga0451576_0085552 Ga0451576_0085552_506_2083 482
136 3300046689 Ga0495613_0023125 Ga0495613_0023125_1514_3052 482

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04389

Peptidase_M28

Peptidase family M28

318

524

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
6zeq-assembly1.cif.gz_A aspergillus oryzae leucine aminopeptidase a mature enzyme 0.8064 243 458
6ica-assembly3.cif.gz_C the crystal structure of legionella pneumophila lapa aminopeptidase 0.8036 243 460
6ica-assembly2.cif.gz_B the crystal structure of legionella pneumophila lapa aminopeptidase 0.8018 243 460
1xjo-assembly1.cif.gz_A structure of aminopeptidase 0.7998 240 456
6zep-assembly1.cif.gz_A flavourzyme leucine aminopeptidase a proenzyme 0.7978 243 458
ID Description Score Start End Superfamily
5ib9A01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8514 30 461 3.40.630.10
af_Q59RF7_72_332_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8263 236 452 3.40.630.10
5ib9A01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8006 30 461 3.40.630.10
1xjoA00 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.7998 240 456 3.40.630.10
af_Q5AA00_122_414_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.7879 243 458 3.40.630.10
ID Description Score Start End GO Terms
AF-A0A254QML4-F1-model_v4 Peptidase M28 domain-containing protein 0.9402 33 481 GO:0006508
GO:0008235
AF-A0A7C7P588-F1-model_v4 deleted 0.9296 238 477
AF-A0A7Y2GV68-F1-model_v4 M20/M25/M40 family metallo-hydrolase 0.9289 244 466 GO:0006508
GO:0008235
AF-A0A2V9X358-F1-model_v4 Aminopeptidase 0.9265 244 467 GO:0004177
GO:0006508
GO:0008235
AF-A0A382TR34-F1-model_v4 Peptidase M28 domain-containing protein 0.9194 238 469 GO:0006508
GO:0008235

Feature Viewer

pLDDT pTM Quality
89.14 0.86 High
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Predicted Structure (AlphaFold2)

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