F164970

General Info

Members Datasets Scaffolds Average Seq Length
135 117 96 333

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2990088156|2990088460
Length 364
Sequence AARSTSSREPDGPAIETRGLVKVFGDNRAVDGIDLRVPAGTLYGVLGPNGAGKTTAVKMLATLLRPDGGEARVFGHDVVREADAVRTRVSLTGQYASVDEDLTGTENLVLLARLLGHSKPAARKRAGLLLESFGLTDAAGRQVKQYSGGMRRRIDIAASILNTPDLLFLDEPTTGLDPRSRNQVWDIVRAVVAQGTTVLLTTQYLDEADQLAGRIAVIDHGRVIAEGTPGQLKSSVGAGSVHLRLRDAGQREEARRVLSQTLAAQVQPESDPVALTARVQGGGTERGAAEQAALALAELSRSGITVDHFSLGQPSLDEVFLALTDRPAHDEQPENGRAGHGSPLNTPSQKGRSRNGQAAEEATP

Samples

Sample ID Description Type Environment
1 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
2 2554235469 Sporolactobacillus laevolacticus DSM 442 Isolate Rhizosphere
3 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
4 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
5 2593339131 Bacillus sp. UNCCL81 Isolate Unclassified
6 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
7 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
8 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
9 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
10 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
11 2757320391 Bacillus sp. NFR08 Isolate Rhizoplane
12 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
13 2775507177 Bacillus sp. AFS055030 Isolate Unclassified
14 2775507192 Bacillus sp. AFS041924 Isolate Unclassified
15 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
16 2818991441 Niallia circulans 3243 Isolate Rhizosphere
17 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
18 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
19 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
20 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
21 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
22 2919395869 Microbacterium resistens 2980 Isolate Unclassified
23 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
24 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
25 2936340661 Gottfriedia acidiceleris 1-17 Isolate Rhizosphere
26 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
27 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
28 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
29 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
30 2977254563 Bacillus sp. SORGH_AS 510 Isolate Unclassified
31 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
32 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
33 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
34 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
35 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
36 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
37 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
38 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
39 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
40 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
41 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
42 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
43 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
44 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
57 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
67 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
68 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
69 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
70 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
71 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
72 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
73 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
74 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
75 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
76 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
77 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
78 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
79 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
80 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
81 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
82 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
83 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
84 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
85 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
86 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
87 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
88 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
89 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
90 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
91 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
92 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
93 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
94 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
95 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
103 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
104 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
106 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
107 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
108 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
109 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
110 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
111 3300053722 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 endosphere Metagenome Endosphere
112 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
113 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
114 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
115 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
116 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
117 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 71.11
Metatranscriptomes 0
Isolates 28.89

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.04
Nodule 0
Rhizoplane 4.44
Rhizosphere 60
Stem 0
Stem Tuber 0
Unclassified 18.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1005002 3300002737 Bacteria 2788
2 JGI25151J46595_10002787 3300003187 Bacteria 10123
3 JGI25151J46595_10002883 3300003187 Bacteria 9875
4 JGI25151J46595_10006229 3300003187 Bacteria 6034
5 JGI25151J46595_10014440 3300003187 Bacteria 3517
6 JGI25406J46586_10015564 3300003203 Bacteria 3203
7 Ga0055532_1000121 3300003758 Bacteria 80171
8 Ga0055536_1011223 3300003781 Bacteria 3462
9 Ga0070658_10000190 3300005327 Bacteria 54223
10 Ga0070658_10004795 3300005327 Bacteria 11006
11 Ga0070667_100000001 3300005367 Bacteria 1108638
12 Ga0070681_10004817 3300005458 Bacteria 12934
13 Ga0081539_10000516 3300005985 Bacteria 80445
14 Ga0105243_10000994 3300009148 Bacteria 26320
15 Ga0105243_10010418 3300009148 Bacteria 7060
16 Ga0105241_10187908 3300009174 Bacteria 1718
17 Ga0105237_10060313 3300009545 Bacteria 3795
18 Ga0157371_10000561 3300013102 Bacteria 43999
19 Ga0157370_10066907 3300013104 Bacteria 3397
20 Ga0157369_10092161 3300013105 Bacteria 3234
21 Ga0157375_10656857 3300013308 Bacteria 1204
22 Ga0209784_100189 3300025224 Bacteria 49348
23 Ga0209566_100069 3300025225 Bacteria 177387
24 Ga0209566_100304 3300025225 Bacteria 44584
25 Ga0209147_100062 3300025229 Bacteria 242831
26 Ga0209258_101213 3300025242 Bacteria 10107
27 Ga0209258_106101 3300025242 Bacteria 1935
28 Ga0209025_1000287 3300025294 Bacteria 113923
29 Ga0209025_1002557 3300025294 Bacteria 18982
30 Ga0209025_1003040 3300025294 Bacteria 16535
31 Ga0209025_1010625 3300025294 Bacteria 6207
32 Ga0209025_1013898 3300025294 Bacteria 5013
33 Ga0207655_1014642 3300025728 Bacteria 4417
34 Ga0207647_10052777 3300025904 Bacteria 2508
35 Ga0207705_10000001 3300025909 Bacteria 2061880
36 Ga0207707_10012610 3300025912 Bacteria 7345
37 Ga0207664_10122183 3300025929 Bacteria 2181
38 Ga0207690_10093847 3300025932 Bacteria 2128
39 Ga0207709_10005353 3300025935 Bacteria 7301
40 Ga0207667_10152963 3300025949 Bacteria 2374
41 Ga0207658_10000003 3300025986 Bacteria 1151934
42 Ga0265322_10011170 3300028654 Bacteria 2605
43 Ga0265338_10000925 3300028800 Bacteria 49504
44 Ga0265338_10059875 3300028800 Bacteria 3352
45 Ga0265324_10000345 3300029957 Bacteria 33698
46 Ga0307511_10177975 3300030521 Bacteria 1153
47 Ga0307512_10003431 3300030522 Bacteria 18469
48 Ga0265339_10012801 3300031249 Bacteria 5100
49 Ga0265327_10001794 3300031251 Bacteria 25181
50 Ga0265316_10001231 3300031344 Bacteria 27541
51 Ga0307406_10239025 3300031901 Bacteria 1361
52 Ga0307409_100246257 3300031995 Bacteria 1631
53 Ga0307416_100389528 3300032002 Bacteria 1427
54 Ga0395900_0245319 3300037418 Bacteria 1795
55 Ga0466965_0005870 3300044683 Bacteria 5542
56 Ga0466960_0015393 3300044901 Bacteria 3296
57 Ga0466960_0018661 3300044901 Bacteria 3044
58 Ga0466958_0122049 3300045836 Bacteria 1632
59 Ga0466967_0488537 3300045976 Bacteria 1207
60 Ga0495627_005267 3300046453 Bacteria 5238
61 Ga0495590_0038387 3300046457 Bacteria 1670
62 Ga0495588_0000124 3300046674 Bacteria 130833
63 Ga0495676_0058480 3300047321 Bacteria 3033
64 Ga0495681_0087079 3300047470 Bacteria 1385
65 Ga0496102_0018962 3300048905 Bacteria 6053
66 Ga0496103_0077788 3300048906 Bacteria 2083
67 Ga0496110_0451172 3300048913 Bacteria 1172
68 Ga0496114_0323063 3300048917 Bacteria 1364
69 Ga0496117_0014300 3300048920 Bacteria 6847
70 Ga0496121_0035525 3300048924 Bacteria 4465
71 Ga0496121_0255278 3300048924 Bacteria 1214
72 Ga0496122_0060455 3300048925 Bacteria 2790
73 Ga0496126_0129216 3300048929 Bacteria 2185
74 Ga0496126_0405370 3300048929 Bacteria 1105
75 Ga0501034_0003677 3300049571 Bacteria 17336
76 Ga0501034_0021506 3300049571 Bacteria 6573
77 Ga0501034_0112714 3300049571 Bacteria 2709
78 Ga0501039_0057455 3300049575 Bacteria 3013
79 Ga0501042_0022271 3300049578 Bacteria 4426
80 Ga0501043_0042101 3300049579 Bacteria 3588
81 Ga0501046_0000002 3300049580 Bacteria 526908
82 Ga0501046_0004442 3300049580 Bacteria 12725
83 Ga0501047_0016175 3300049581 Bacteria 7117
84 Ga0501048_0012480 3300049582 Bacteria 6321
85 Ga0501073_0004268 3300049589 Bacteria 10713
86 Ga0501074_0022131 3300049590 Bacteria 4618
87 Ga0501035_0055401 3300049822 Bacteria 3540
88 Ga0501045_0045136 3300049824 Bacteria 3209
89 nmdc:mga0yw44_48762_c1 3300050492 Bacteria 2554
90 nmdc:mga0qj67_248736_c1 3300050509 Bacteria 1443
91 Ga0500614_000001 3300053123 Bacteria 1274484
92 Ga0500600_0100159 3300053149 Bacteria 1530
93 Ga0500616_0006439 3300053153 Bacteria 7689
94 Ga0500649_000027 3300053722 Bacteria 29003
95 Ga0501084_0081826 3300054114 Bacteria 2709
96 Ga0501082_0003243 3300060353 Bacteria 14196

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044683 Ga0466965_0005870 Ga0466965_0005870_150_1142 295
2 3300044901 Ga0466960_0015393 Ga0466960_0015393_468_1460 295
3 3300045836 Ga0466958_0122049 Ga0466958_0122049_608_1600 302
4 3300049580 Ga0501046_0000002 Ga0501046_0000002_88457_89449 302
5 iso_pu_bacteria 2925326138 2925333359 306
6 3300005367 Ga0070667_100000001 Ga0070667_100000001657 308
7 3300025986 Ga0207658_10000003 Ga0207658_10000003724 308
8 iso_pu_bacteria 2643221673 2644405462 312
9 iso_pu_bacteria 2946045630 2946049348 312
10 3300030522 Ga0307512_10003431 Ga0307512_1000343110 313
11 3300003203 JGI25406J46586_10015564 JGI25406J46586_100155642 314
12 3300005985 Ga0081539_10000516 Ga0081539_1000051667 314
13 3300030521 Ga0307511_10177975 Ga0307511_101779752 314
14 iso_pu_bacteria 2744054611 2744957373 318
15 3300046453 Ga0495627_005267 Ga0495627_005267_3520_4515 319
16 3300048929 Ga0496126_0129216 Ga0496126_0129216_873_1889 319
17 3300053149 Ga0500600_0100159 Ga0500600_0100159_435_1430 319
18 iso_pu_bacteria 2899359706 2899366464 319
19 3300028654 Ga0265322_10011170 Ga0265322_100111702 322
20 3300028800 Ga0265338_10000925 Ga0265338_1000092538 322
21 3300028800 Ga0265338_10059875 Ga0265338_100598753 322
22 3300029957 Ga0265324_10000345 Ga0265324_1000034520 322
23 3300031249 Ga0265339_10012801 Ga0265339_100128012 322
24 3300031251 Ga0265327_10001794 Ga0265327_100017944 322
25 3300031344 Ga0265316_10001231 Ga0265316_100012318 322
26 3300050509 nmdc:mga0qj67_248736_c1 nmdc:mga0qj67_248736_c1_361_1332 322
27 3300005327 Ga0070658_10000190 Ga0070658_1000019018 323
28 3300005458 Ga0070681_10004817 Ga0070681_1000481713 323
29 3300009148 Ga0105243_10010418 Ga0105243_100104183 323
30 3300009174 Ga0105241_10187908 Ga0105241_101879082 323
31 3300013102 Ga0157371_10000561 Ga0157371_1000056136 323
32 3300013104 Ga0157370_10066907 Ga0157370_100669071 323
33 3300025904 Ga0207647_10052777 Ga0207647_100527773 323
34 3300025909 Ga0207705_10000001 Ga0207705_100000011148 323
35 3300025912 Ga0207707_10012610 Ga0207707_100126105 323
36 3300046674 Ga0495588_0000124 Ga0495588_0000124_57716_58693 323
37 3300047321 Ga0495676_0058480 Ga0495676_0058480_252_1229 323
38 3300050492 nmdc:mga0yw44_48762_c1 nmdc:mga0yw44_48762_c1_710_1687 323
39 3300053123 Ga0500614_000001 Ga0500614_000001_56747_57724 323
40 3300053722 Ga0500649_000027 Ga0500649_000027_20651_21628 323
41 3300049571 Ga0501034_0112714 Ga0501034_0112714_1269_2246 324
42 3300060353 Ga0501082_0003243 Ga0501082_0003243_3123_4100 324
43 3300003187 JGI25151J46595_10014440 JGI25151J46595_100144404 326
44 3300003781 Ga0055536_1011223 Ga0055536_10112232 326
45 iso_pu_bacteria 2818991441 2819568994 326
46 iso_pu_bacteria 2938649242 2938652327 326
47 iso_pu_bacteria 2968558590 2968564009 326
48 iso_pu_bacteria 2996632988 2996638437 326
49 iso_pu_bacteria 3006988479 3006990372 326
50 3300053153 Ga0500616_0006439 Ga0500616_0006439_4841_5836 328
51 iso_pu_bacteria 2919713450 2919717196 328
52 3300025929 Ga0207664_10122183 Ga0207664_101221832 329
53 3300044901 Ga0466960_0018661 Ga0466960_0018661_1184_2185 329
54 3300045976 Ga0466967_0488537 Ga0466967_0488537_115_1131 329
55 3300049571 Ga0501034_0003677 Ga0501034_0003677_2657_3661 329
56 iso_pu_bacteria 2643221632 2644182689 329
57 iso_pu_bacteria 2833709550 2833709853 329
58 iso_pu_bacteria 2980182181 2980185230 329
59 3300013308 Ga0157375_10656857 Ga0157375_106568571 330
60 3300025224 Ga0209784_100189 Ga0209784_10018921 330
61 iso_pu_bacteria 2563366752 2563928241 330
62 iso_pu_bacteria 2919395869 2919399163 330
63 iso_pu_bacteria 2988225383 2988229998 330
64 iso_pu_bacteria 8055632911 8055637249 330
65 3300025294 Ga0209025_1002557 Ga0209025_100255710 331
66 3300025932 Ga0207690_10093847 Ga0207690_100938472 332
67 3300025949 Ga0207667_10152963 Ga0207667_101529633 332
68 iso_pu_bacteria 2802428803 2802435793 332
69 iso_pu_bacteria 2904595352 2904596964 332
70 iso_pu_bacteria 2977254563 2977259408 332
71 iso_pu_bacteria 2990088156 2990088460 332
72 3300002737 JGI25162J39368_1005002 JGI25162J39368_10050023 333
73 3300003187 JGI25151J46595_10002787 JGI25151J46595_100027872 333
74 3300003187 JGI25151J46595_10002883 JGI25151J46595_100028831 333
75 3300003187 JGI25151J46595_10006229 JGI25151J46595_100062292 333
76 3300003758 Ga0055532_1000121 Ga0055532_100012147 333
77 3300005327 Ga0070658_10004795 Ga0070658_100047953 333
78 3300009148 Ga0105243_10000994 Ga0105243_1000099414 333
79 3300009545 Ga0105237_10060313 Ga0105237_100603133 333
80 3300013105 Ga0157369_10092161 Ga0157369_100921614 333
81 3300025225 Ga0209566_100069 Ga0209566_10006917 333
82 3300025225 Ga0209566_100304 Ga0209566_10030417 333
83 3300025229 Ga0209147_100062 Ga0209147_10006258 333
84 3300025242 Ga0209258_101213 Ga0209258_1012132 333
85 3300025242 Ga0209258_106101 Ga0209258_1061013 333
86 3300025294 Ga0209025_1000287 Ga0209025_10002875 333
87 3300025294 Ga0209025_1003040 Ga0209025_10030404 333
88 3300025294 Ga0209025_1010625 Ga0209025_10106255 333
89 3300025294 Ga0209025_1013898 Ga0209025_10138988 333
90 3300025728 Ga0207655_1014642 Ga0207655_10146422 333
91 3300025935 Ga0207709_10005353 Ga0207709_100053532 333
92 3300031901 Ga0307406_10239025 Ga0307406_102390252 333
93 3300031995 Ga0307409_100246257 Ga0307409_1002462571 333
94 3300032002 Ga0307416_100389528 Ga0307416_1003895282 333
95 3300037418 Ga0395900_0245319 Ga0395900_0245319_690_1721 333
96 3300046457 Ga0495590_0038387 Ga0495590_0038387_256_1314 333
97 3300047470 Ga0495681_0087079 Ga0495681_0087079_90_1118 333
98 3300048905 Ga0496102_0018962 Ga0496102_0018962_5010_6041 333
99 3300048906 Ga0496103_0077788 Ga0496103_0077788_939_1970 333
100 3300048913 Ga0496110_0451172 Ga0496110_0451172_82_1113 333
101 3300048917 Ga0496114_0323063 Ga0496114_0323063_314_1327 333
102 3300048920 Ga0496117_0014300 Ga0496117_0014300_3504_4520 333
103 3300048924 Ga0496121_0035525 Ga0496121_0035525_1996_3015 333
104 3300048924 Ga0496121_0255278 Ga0496121_0255278_135_1160 333
105 3300048925 Ga0496122_0060455 Ga0496122_0060455_265_1296 333
106 3300048929 Ga0496126_0405370 Ga0496126_0405370_76_1095 333
107 3300049571 Ga0501034_0021506 Ga0501034_0021506_4798_5820 333
108 3300049575 Ga0501039_0057455 Ga0501039_0057455_51_1073 333
109 3300049578 Ga0501042_0022271 Ga0501042_0022271_2920_3942 333
110 3300049579 Ga0501043_0042101 Ga0501043_0042101_1403_2419 333
111 3300049580 Ga0501046_0004442 Ga0501046_0004442_2769_3791 333
112 3300049581 Ga0501047_0016175 Ga0501047_0016175_1948_2970 333
113 3300049582 Ga0501048_0012480 Ga0501048_0012480_2920_3942 333
114 3300049589 Ga0501073_0004268 Ga0501073_0004268_8137_9159 333
115 3300049590 Ga0501074_0022131 Ga0501074_0022131_2418_3440 333
116 3300049822 Ga0501035_0055401 Ga0501035_0055401_1396_2412 333
117 3300049824 Ga0501045_0045136 Ga0501045_0045136_1168_2190 333
118 3300054114 Ga0501084_0081826 Ga0501084_0081826_1549_2571 333
119 iso_pu_bacteria 2548877040 2550902858 333
120 iso_pu_bacteria 2554235469 2556064512 333
121 iso_pu_bacteria 2571042143 2571533169 333
122 iso_pu_bacteria 2593339131 2595092318 333
123 iso_pu_bacteria 2600255286 2601637295 333
124 iso_pu_bacteria 2728368933 2728530810 333
125 iso_pu_bacteria 2757320391 2757566914 333
126 iso_pu_bacteria 2773857763 2774397771 333
127 iso_pu_bacteria 2775507177 2777760812 333
128 iso_pu_bacteria 2775507192 2777836580 333
129 iso_pu_bacteria 2888578766 2888583126 333
130 iso_pu_bacteria 2889049205 2889054647 333
131 iso_pu_bacteria 2936340661 2936344400 333
132 iso_pu_bacteria 2956897341 2956898661 333
133 iso_pu_bacteria 8002317523 8002321223 333
134 iso_pu_bacteria 8054465665 8054469257 333
135 iso_pu_bacteria 8057473075 8057476482 333

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

30

174

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
6xgz-assembly2.cif.gz_C crystal structure of e. coli mlafb abc transport subunits in the monomeric state 0.9376 4 228
6xgz-assembly3.cif.gz_E crystal structure of e. coli mlafb abc transport subunits in the monomeric state 0.9361 4 228
6xgz-assembly4.cif.gz_G crystal structure of e. coli mlafb abc transport subunits in the monomeric state 0.9338 4 228
4p33-assembly1.cif.gz_A crystal structure of e. coli lptb-e163q in complex with atp-sodium 0.9255 9 226
7ahd-assembly1.cif.gz_D opua (e190q) occluded 0.9208 8 226
ID Description Score Start End Superfamily
af_Q9VRG3_1356_1574_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9414 4 217 3.40.50.300
af_A1ZBS3_470_698_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9388 7 229 3.40.50.300
af_A4HV32_726_961_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9342 5 228 3.40.50.300
af_P78363_1926_2175_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9333 6 229 3.40.50.300
af_Q9VVK6_1124_1370_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.931 6 232 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7V1AN41-F1-model_v4 ABC transporter ATP-binding protein 0.94 9 222 GO:0005524
GO:0016887
AF-A0A4R6TUW6-F1-model_v4 Heme ABC exporter ATP-binding subunit CcmA 0.9381 7 230 GO:0005524
GO:0016887
GO:0017004
GO:0022857
AF-E6SCH1-F1-model_v4 ABC transporter related protein 0.9376 3 228 GO:0005524
GO:0016887
GO:0046677
AF-A0A7Z9SEN7-F1-model_v4 ATP-binding cassette domain-containing protein 0.9375 9 229 GO:0005524
GO:0016887
AF-A0A1I2M2I1-F1-model_v4 ABC-2 type transport system ATP-binding protein/oleandomycin transport system ATP-binding protein 0.9351 5 226 GO:0005524
GO:0016887

Feature Viewer

pLDDT pTM Quality
84.99 0.75 High
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Predicted Structure (AlphaFold2)

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