F160734

General Info

Members Datasets Scaffolds Average Seq Length
134 112 134 582

Family's Representative Sequence

Representative Sequence 3300042876|Ga0451577_0052380|Ga0451577_0052380_460_2361
Length 627
Sequence LDGIRLACIWAASGAGDGGFPSIGMRNRRELRAVMCAVRGTFIAASSGMKLAAIALDYDGTIAVRDRMDPSVRQAISEARAAGIAVLLVTGRRLDDLKRVAGDLGCFDVVVAENGAVIDFPLSGRHVVLGHPPQAAFVDEIRRRGVACDVGESLVEADAGECGKIIEAIHALEQPLVLTFNRGRVMVLPQAVGKSTGLRQALVTLRISIHNTVGIGDAENDHDLLDACEVGVAVEWGSSALLSVADDVIRGEGPPAVAEYIRNLAKSGELTPALMGRRRLLLGRQHDGTPISIAIRGRAVLIAGEPGTGKSWLAGLMAEQLILQGYCVCIIDPEGDYTALEALPSVIVLGGARELARALRHPDVSIVIDLSRMRHREKVQYMDRVMDLLLRLRRQTGLPHRIITDEAHYLISRKSPLAVLPAELHGQTLITYRVSTLAESVQLRTEAVVLVTRETDPREIESLRGMCCDVCGSVAPALFQNLQLNEAALLPGCEEAEGCVRRFEIDPRLTSHVRHRTKYLDMPVDEGQAFVFTANGEPAARARTLKEFVGLLAALPPRVVEGHLRRRDFSRWIGDVFRDGPLAARVRTLETSVSTELPADIAAEVDQAIRARYERMPSDFVPSSLPA

Samples

Sample ID Description Type Environment
1 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
5 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
6 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
7 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
8 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
17 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
28 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
32 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
38 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
43 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
61 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
62 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
63 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
64 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
65 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
66 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
67 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
68 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
69 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
70 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
71 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
72 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
73 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
74 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
75 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
76 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
77 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
78 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
79 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
80 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
81 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
82 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
83 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
84 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
85 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
86 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
87 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
88 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
89 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
90 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
91 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
92 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
98 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
99 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
100 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
101 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
102 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
103 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
104 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
105 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
106 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
107 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
108 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
109 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
110 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
111 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
112 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.49
Rhizosphere 96.27
Stem 0
Stem Tuber 0
Unclassified 2.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065715_10000398 3300005293 Bacteria 15880
2 Ga0065715_10090479 3300005293 Bacteria 6940
3 Ga0070683_100073015 3300005329 Bacteria 3204
4 Ga0070670_100024123 3300005331 Bacteria 5233
5 Ga0070670_100037528 3300005331 Bacteria 4169
6 Ga0070670_100109915 3300005331 Bacteria 2375
7 Ga0070675_100130133 3300005354 Bacteria 2144
8 Ga0070673_100019446 3300005364 Bacteria 4874
9 Ga0070673_100051416 3300005364 Bacteria 3227
10 Ga0070688_100006404 3300005365 Bacteria 6292
11 Ga0070701_10007442 3300005438 Bacteria 4680
12 Ga0070708_100049399 3300005445 Bacteria 3722
13 Ga0070681_10032007 3300005458 Bacteria 5279
14 Ga0070685_10010475 3300005466 Bacteria 4820
15 Ga0070706_100066368 3300005467 Bacteria 3338
16 Ga0070707_100018918 3300005468 Bacteria 6486
17 Ga0070698_100054193 3300005471 Bacteria 4073
18 Ga0070699_100003292 3300005518 Bacteria 14282
19 Ga0070697_100034539 3300005536 Bacteria 4078
20 Ga0070686_100046729 3300005544 Unclassified 2733
21 Ga0070695_100065693 3300005545 Unclassified 2363
22 Ga0070665_100096221 3300005548 Bacteria 2966
23 Ga0070664_100059525 3300005564 Unclassified 3250
24 Ga0068859_100074015 3300005617 Unclassified 3445
25 Ga0068864_100017474 3300005618 Bacteria 5980
26 Ga0068864_100038809 3300005618 Bacteria 4068
27 Ga0068870_10025407 3300005840 Bacteria 2939
28 Ga0068863_100001484 3300005841 Bacteria 23260
29 Ga0068858_100012566 3300005842 Bacteria 7985
30 Ga0068860_100047481 3300005843 Bacteria 4092
31 Ga0068862_100005498 3300005844 Bacteria 10587
32 Ga0070712_100091045 3300006175 Bacteria 2234
33 Ga0097621_100001181 3300006237 Bacteria 18107
34 Ga0068871_100006872 3300006358 Bacteria 8102
35 Ga0075428_100200108 3300006844 Bacteria 2160
36 Ga0075428_100260136 3300006844 Bacteria 1869
37 Ga0075434_100067123 3300006871 Unclassified 3574
38 Ga0068865_100000259 3300006881 Bacteria 29371
39 Ga0068865_100086187 3300006881 Bacteria 2267
40 Ga0097620_100074011 3300006931 Unclassified 3445
41 Ga0105240_10203186 3300009093 Bacteria 2321
42 Ga0105247_10014963 3300009101 Bacteria 4651
43 Ga0114129_10003081 3300009147 Bacteria 23393
44 Ga0114129_10129372 3300009147 Bacteria 3470
45 Ga0114129_10228614 3300009147 Bacteria 2506
46 Ga0114129_10294098 3300009147 Bacteria 2166
47 Ga0105243_10007132 3300009148 Bacteria 8593
48 Ga0105242_10004686 3300009176 Bacteria 10585
49 Ga0105248_10014804 3300009177 Bacteria 8591
50 Ga0105248_10021153 3300009177 Bacteria 7208
51 Ga0105248_10082421 3300009177 Bacteria 3617
52 Ga0105248_10158285 3300009177 Unclassified 2556
53 Ga0105249_10004894 3300009553 Bacteria 11560
54 Ga0163163_10002738 3300014325 Bacteria 14875
55 Ga0213876_10054838 3300021384 Unclassified 2104
56 Ga0207682_10005816 3300025893 Bacteria 4998
57 Ga0207707_10070568 3300025912 Unclassified 3044
58 Ga0207695_10108048 3300025913 Bacteria 2767
59 Ga0207652_10039894 3300025921 Unclassified 3986
60 Ga0207646_10116784 3300025922 Bacteria 2396
61 Ga0207650_10034104 3300025925 Unclassified 3690
62 Ga0207650_10037345 3300025925 Bacteria 3540
63 Ga0207650_10099634 3300025925 Bacteria 2234
64 Ga0207659_10068668 3300025926 Bacteria 2578
65 Ga0207686_10008696 3300025934 Bacteria 5485
66 Ga0207691_10001662 3300025940 Bacteria 22005
67 Ga0207712_10004767 3300025961 Bacteria 8562
68 Ga0207703_10008671 3300026035 Bacteria 8024
69 Ga0207703_10008830 3300026035 Bacteria 7946
70 Ga0207703_10021339 3300026035 Bacteria 5071
71 Ga0207708_10041614 3300026075 Bacteria 3502
72 Ga0207641_10015375 3300026088 Bacteria 6271
73 Ga0207641_10037039 3300026088 Unclassified 4073
74 Ga0207648_10089540 3300026089 Bacteria 2688
75 Ga0207683_10115932 3300026121 Bacteria 2401
76 Ga0268265_10044378 3300028380 Bacteria 3310
77 Ga0268264_10074000 3300028381 Bacteria 2893
78 Ga0265319_1001308 3300028563 Bacteria 15063
79 Ga0265318_10001059 3300028577 Bacteria 17431
80 Ga0265329_10001019 3300031242 Bacteria 13972
81 Ga0265340_10004323 3300031247 Bacteria 7956
82 Ga0265339_10044664 3300031249 Unclassified 2442
83 Ga0265331_10000081 3300031250 Bacteria 136351
84 Ga0307408_100091731 3300031548 Bacteria 2295
85 Ga0265313_10010342 3300031595 Bacteria 5917
86 Ga0265342_10001528 3300031712 Bacteria 21402
87 Ga0316578_10019604 3300031728 Unclassified 3727
88 Ga0307416_100058269 3300032002 Bacteria 3130
89 Ga0373956_0053371 3300035119 Bacteria 1820
90 Ga0373943_0010953 3300035170 Bacteria 4075
91 Ga0373946_0030247 3300035171 Bacteria 2161
92 Ga0373955_0015344 3300035172 Bacteria 3749
93 Ga0316574_0000072 3300035398 Bacteria 27377
94 Ga0373924_0001478 3300035410 Bacteria 7641
95 Ga0373947_0012942 3300035725 Bacteria 4785
96 Ga0373925_0014433 3300037068 Bacteria 5711
97 Ga0373925_0095375 3300037068 Unclassified 2279
98 Ga0395905_0103516 3300037471 Bacteria 2673
99 Ga0436365_0661307 3300039437 Bacteria 4335
100 Ga0451577_0052380 3300042876 Unclassified 3645
101 Ga0495608_0013036 3300046511 Bacteria 5768
102 Ga0495645_0026387 3300046543 Unclassified 4217
103 Ga0495667_0002705 3300046559 Bacteria 11855
104 Ga0495657_0048646 3300046675 Bacteria 2859
105 Ga0495674_0051737 3300047319 Unclassified 3620
106 Ga0495684_0105564 3300047471 Bacteria 2128
107 Ga0495602_0071029 3300048088 Bacteria 2975
108 Ga0496108_0020946 3300048911 Bacteria 5376
109 Ga0496112_0001517 3300048915 Bacteria 17875
110 Ga0496126_0005753 3300048929 Bacteria 14026
111 Ga0501034_0001838 3300049571 Bacteria 26947
112 Ga0501036_0013687 3300049572 Bacteria 6744
113 Ga0501040_0031323 3300049576 Bacteria 3594
114 Ga0501041_0012064 3300049577 Bacteria 5116
115 Ga0501042_0139054 3300049578 Unclassified 1751
116 Ga0501068_0030267 3300049584 Bacteria 3210
117 Ga0501070_0001394 3300049586 Bacteria 21627
118 Ga0501073_0062092 3300049589 Bacteria 2606
119 Ga0501073_0077915 3300049589 Bacteria 2306
120 Ga0501074_0057809 3300049590 Bacteria 2794
121 Ga0501075_0022451 3300049591 Bacteria 4610
122 Ga0501076_0021849 3300049592 Bacteria 4913
123 Ga0501080_0043567 3300049742 Bacteria 4179
124 Ga0501081_0007175 3300049743 Bacteria 7247
125 Ga0501083_0000899 3300049744 Bacteria 19690
126 Ga0501045_0042272 3300049824 Bacteria 3318
127 nmdc:mga05p37_15827_c1 3300050507 Bacteria 9072
128 nmdc:mga08y16_182245_c1 3300050511 Unclassified 2180
129 nmdc:mga08x19_61922_c1 3300050514 Bacteria 2425
130 Ga0501084_0026261 3300054114 Bacteria 4858
131 Ga0501084_0076794 3300054114 Bacteria 2800
132 Ga0501082_0015678 3300060353 Bacteria 6520
133 Ga0501082_0037204 3300060353 Bacteria 4194
134 Ga0530510_0036609 3300061734 Bacteria 3537

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035119 Ga0373956_0053371 Ga0373956_0053371_198_1712 499
2 3300049578 Ga0501042_0139054 Ga0501042_0139054_91_1731 508
3 3300026089 Ga0207648_10089540 Ga0207648_100895401 520
4 3300006844 Ga0075428_100200108 Ga0075428_1002001081 531
5 3300009147 Ga0114129_10129372 Ga0114129_101293723 534
6 3300048929 Ga0496126_0005753 Ga0496126_0005753_10288_12036 544
7 3300005458 Ga0070681_10032007 Ga0070681_100320074 546
8 3300025912 Ga0207707_10070568 Ga0207707_100705682 546
9 3300025921 Ga0207652_10039894 Ga0207652_100398942 546
10 3300050511 nmdc:mga08y16_182245_c1 nmdc:mga08y16_182245_c1_506_2155 548
11 3300050514 nmdc:mga08x19_61922_c1 nmdc:mga08x19_61922_c1_26_1744 548
12 3300049590 Ga0501074_0057809 Ga0501074_0057809_926_2608 552
13 3300005331 Ga0070670_100037528 Ga0070670_1000375284 553
14 3300005354 Ga0070675_100130133 Ga0070675_1001301332 553
15 3300005471 Ga0070698_100054193 Ga0070698_1000541935 553
16 3300005564 Ga0070664_100059525 Ga0070664_1000595251 553
17 3300005840 Ga0068870_10025407 Ga0068870_100254072 553
18 3300025922 Ga0207646_10116784 Ga0207646_101167841 553
19 3300025925 Ga0207650_10034104 Ga0207650_100341042 553
20 3300025926 Ga0207659_10068668 Ga0207659_100686681 553
21 3300049576 Ga0501040_0031323 Ga0501040_0031323_543_2210 554
22 3300005536 Ga0070697_100034539 Ga0070697_1000345394 558
23 3300005518 Ga0070699_100003292 Ga0070699_1000032927 561
24 3300005445 Ga0070708_100049399 Ga0070708_1000493992 563
25 3300005467 Ga0070706_100066368 Ga0070706_1000663682 563
26 3300005468 Ga0070707_100018918 Ga0070707_1000189186 563
27 3300031548 Ga0307408_100091731 Ga0307408_1000917312 564
28 3300032002 Ga0307416_100058269 Ga0307416_1000582692 564
29 3300037471 Ga0395905_0103516 Ga0395905_0103516_138_1847 564
30 3300049572 Ga0501036_0013687 Ga0501036_0013687_4911_6647 564
31 3300049584 Ga0501068_0030267 Ga0501068_0030267_1192_2910 564
32 3300049586 Ga0501070_0001394 Ga0501070_0001394_2763_4481 564
33 3300049589 Ga0501073_0062092 Ga0501073_0062092_278_1996 564
34 3300049589 Ga0501073_0077915 Ga0501073_0077915_344_2062 564
35 3300049742 Ga0501080_0043567 Ga0501080_0043567_578_2296 564
36 3300049744 Ga0501083_0000899 Ga0501083_0000899_1602_3320 564
37 3300060353 Ga0501082_0015678 Ga0501082_0015678_4473_6191 564
38 3300060353 Ga0501082_0037204 Ga0501082_0037204_600_2318 564
39 3300005841 Ga0068863_100001484 Ga0068863_10000148423 565
40 3300006844 Ga0075428_100260136 Ga0075428_1002601361 565
41 3300009147 Ga0114129_10003081 Ga0114129_100030817 565
42 3300009147 Ga0114129_10228614 Ga0114129_102286141 565
43 3300009147 Ga0114129_10294098 Ga0114129_102940981 565
44 3300026088 Ga0207641_10015375 Ga0207641_100153753 565
45 3300050507 nmdc:mga05p37_15827_c1 nmdc:mga05p37_15827_c1_6747_8459 565
46 3300005364 Ga0070673_100019446 Ga0070673_1000194464 567
47 3300005364 Ga0070673_100051416 Ga0070673_1000514162 567
48 3300025893 Ga0207682_10005816 Ga0207682_100058162 567
49 3300025925 Ga0207650_10099634 Ga0207650_100996342 567
50 3300025940 Ga0207691_10001662 Ga0207691_1000166214 567
51 3300005329 Ga0070683_100073015 Ga0070683_1000730151 568
52 3300054114 Ga0501084_0076794 Ga0501084_0076794_114_1850 568
53 3300005293 Ga0065715_10090479 Ga0065715_100904793 571
54 3300005331 Ga0070670_100024123 Ga0070670_1000241233 571
55 3300009177 Ga0105248_10158285 Ga0105248_101582852 571
56 3300025925 Ga0207650_10037345 Ga0207650_100373452 571
57 3300042876 Ga0451577_0052380 Ga0451577_0052380_460_2361 571
58 3300031728 Ga0316578_10019604 Ga0316578_100196042 572
59 3300035398 Ga0316574_0000072 Ga0316574_0000072_15595_17319 572
60 3300005365 Ga0070688_100006404 Ga0070688_1000064045 573
61 3300005438 Ga0070701_10007442 Ga0070701_100074423 573
62 3300005466 Ga0070685_10010475 Ga0070685_100104753 573
63 3300005843 Ga0068860_100047481 Ga0068860_1000474813 573
64 3300006881 Ga0068865_100086187 Ga0068865_1000861872 573
65 3300009148 Ga0105243_10007132 Ga0105243_100071326 573
66 3300009553 Ga0105249_10004894 Ga0105249_100048949 573
67 3300025961 Ga0207712_10004767 Ga0207712_100047671 573
68 3300026035 Ga0207703_10008671 Ga0207703_100086713 573
69 3300026075 Ga0207708_10041614 Ga0207708_100416143 573
70 3300026121 Ga0207683_10115932 Ga0207683_101159322 573
71 3300028380 Ga0268265_10044378 Ga0268265_100443782 573
72 3300028381 Ga0268264_10074000 Ga0268264_100740002 573
73 3300009093 Ga0105240_10203186 Ga0105240_102031862 575
74 3300025913 Ga0207695_10108048 Ga0207695_101080481 575
75 3300028563 Ga0265319_1001308 Ga0265319_10013086 575
76 3300028577 Ga0265318_10001059 Ga0265318_1000105911 575
77 3300031242 Ga0265329_10001019 Ga0265329_100010192 575
78 3300031247 Ga0265340_10004323 Ga0265340_100043233 575
79 3300031249 Ga0265339_10044664 Ga0265339_100446642 575
80 3300031250 Ga0265331_10000081 Ga0265331_1000008148 575
81 3300031595 Ga0265313_10010342 Ga0265313_100103424 575
82 3300031712 Ga0265342_10001528 Ga0265342_100015285 575
83 3300046511 Ga0495608_0013036 Ga0495608_0013036_3760_5601 575
84 3300046559 Ga0495667_0002705 Ga0495667_0002705_2835_4571 575
85 3300046675 Ga0495657_0048646 Ga0495657_0048646_594_2435 575
86 3300047319 Ga0495674_0051737 Ga0495674_0051737_615_2426 575
87 3300047471 Ga0495684_0105564 Ga0495684_0105564_97_1908 575
88 3300048088 Ga0495602_0071029 Ga0495602_0071029_398_2209 575
89 3300005548 Ga0070665_100096221 Ga0070665_1000962211 576
90 3300005618 Ga0068864_100038809 Ga0068864_1000388092 576
91 3300006237 Ga0097621_100001181 Ga0097621_10000118110 576
92 3300006358 Ga0068871_100006872 Ga0068871_1000068722 576
93 3300006871 Ga0075434_100067123 Ga0075434_1000671232 576
94 3300006881 Ga0068865_100000259 Ga0068865_10000025911 576
95 3300009176 Ga0105242_10004686 Ga0105242_100046866 576
96 3300009177 Ga0105248_10021153 Ga0105248_100211532 576
97 3300009177 Ga0105248_10082421 Ga0105248_100824214 576
98 3300025934 Ga0207686_10008696 Ga0207686_100086965 576
99 3300037068 Ga0373925_0095375 Ga0373925_0095375_334_2079 576
100 3300046543 Ga0495645_0026387 Ga0495645_0026387_250_1992 576
101 3300049571 Ga0501034_0001838 Ga0501034_0001838_4195_6000 576
102 3300005293 Ga0065715_10000398 Ga0065715_100003985 577
103 3300005331 Ga0070670_100109915 Ga0070670_1001099152 577
104 3300005544 Ga0070686_100046729 Ga0070686_1000467293 577
105 3300005545 Ga0070695_100065693 Ga0070695_1000656932 577
106 3300005617 Ga0068859_100074015 Ga0068859_1000740153 577
107 3300005618 Ga0068864_100017474 Ga0068864_1000174746 577
108 3300005842 Ga0068858_100012566 Ga0068858_1000125661 577
109 3300005844 Ga0068862_100005498 Ga0068862_1000054985 577
110 3300006175 Ga0070712_100091045 Ga0070712_1000910452 577
111 3300006931 Ga0097620_100074011 Ga0097620_1000740113 577
112 3300009101 Ga0105247_10014963 Ga0105247_100149634 577
113 3300009177 Ga0105248_10014804 Ga0105248_1001480410 577
114 3300014325 Ga0163163_10002738 Ga0163163_1000273815 577
115 3300021384 Ga0213876_10054838 Ga0213876_100548382 577
116 3300026035 Ga0207703_10008830 Ga0207703_100088301 577
117 3300026035 Ga0207703_10021339 Ga0207703_100213393 577
118 3300026088 Ga0207641_10037039 Ga0207641_100370394 577
119 3300035170 Ga0373943_0010953 Ga0373943_0010953_1688_3433 577
120 3300035171 Ga0373946_0030247 Ga0373946_0030247_193_1938 577
121 3300035172 Ga0373955_0015344 Ga0373955_0015344_299_2044 577
122 3300035410 Ga0373924_0001478 Ga0373924_0001478_2425_4170 577
123 3300035725 Ga0373947_0012942 Ga0373947_0012942_2244_3989 577
124 3300037068 Ga0373925_0014433 Ga0373925_0014433_792_2537 577
125 3300039437 Ga0436365_0661307 Ga0436365_0661307_306_2084 577
126 3300048911 Ga0496108_0020946 Ga0496108_0020946_977_2749 577
127 3300048915 Ga0496112_0001517 Ga0496112_0001517_4447_6219 577
128 3300049577 Ga0501041_0012064 Ga0501041_0012064_158_1894 577
129 3300049591 Ga0501075_0022451 Ga0501075_0022451_38_1801 577
130 3300049592 Ga0501076_0021849 Ga0501076_0021849_1343_3079 577
131 3300049743 Ga0501081_0007175 Ga0501081_0007175_5388_7124 577
132 3300049824 Ga0501045_0042272 Ga0501045_0042272_904_2640 577
133 3300054114 Ga0501084_0026261 Ga0501084_0026261_3006_4769 577
134 3300061734 Ga0530510_0036609 Ga0530510_0036609_807_2543 577

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08282

Hydrolase_3

haloacid dehalogenase-like hydrolase

54

142

0.91

PF08282

Hydrolase_3

haloacid dehalogenase-like hydrolase

146

261

0.89

PF01935

DUF87

Helicase HerA, central domain

281

434

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
7udt-assembly1.cif.gz_D cryo-em structure of the rigor state wild type myosin-15-f-actin complex (symmetry expansion and re-centering) 0.8741 247 275
1wr8-assembly1.cif.gz_A crystal structure of hypothetical protein ph1421 from pyrococcus horikoshii. 0.8688 2 213
6bnv-assembly1.cif.gz_I cryoem structure of myosinvi-actin complex in the rigor (nucleotide-free) state, backbone-averaged with side chains truncated to alanine 0.8558 247 275
3niw-assembly1.cif.gz_A crystal structure of a haloacid dehalogenase-like hydrolase from bacteroides thetaiotaomicron 0.8387 2 214
1rlt-assembly4.cif.gz_D transition state analogue of ybiv from e. coli k12 0.8069 4 214
ID Description Score Start End Superfamily
af_A0A0P0VTU7_76_213_1.20.1110.10 Mainly Alpha;Up-down Bundle;Calcium-transporting ATPase, transmembrane domain;Calcium-transporting ATPase, transmembrane domain 0.8975 165 200 1.20.1110.10
1wr8A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.8687 2 213 3.40.50.1000
1nrwA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.8604 5 213 3.40.50.1000
af_A0A1D6GSK2_41_144_3.40.50.1000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.8497 159 201 3.40.50.1000
2hf2B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.8442 1 214 3.40.50.1000
ID Description Score Start End GO Terms
AF-A0A535U5B8-F1-model_v4 HAD family phosphatase 0.9725 1 181 GO:0000287
GO:0005829
GO:0016791
AF-A0A257XAE7-F1-model_v4 Haloacid dehalogenase 0.9684 2 217 GO:0000287
GO:0005829
GO:0016791
AF-A0A535U5B8-F1-model_v4 HAD family phosphatase 0.9621 1 181 GO:0000287
GO:0005829
GO:0016791
AF-A0A537W0Z9-F1-model_v4 Helicase HerA central domain-containing protein 0.9587 1 469 GO:0000287
GO:0005829
GO:0016791
AF-A0A436IM95-F1-model_v4 deleted 0.9576 1 202

Feature Viewer

pLDDT pTM Quality
90.34 0.79 High
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Predicted Structure (AlphaFold2)

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