F160107

General Info

Members Datasets Scaffolds Average Seq Length
134 90 268 520

Family's Representative Sequence

Representative Sequence 3300026075|Ga0207708_10059483|Ga0207708_100594831
Length 554
Sequence MQGYLSLVLHAHLPFVRHPEHEKFLEENWLFEATSETYLPLIQVMDGWLRDRMETRLTMTLSPPLCAMLLDPLLQDRYERHLNGLLELVERELLRTHWDKQFKPLAEMYHQRFHSLRDTYYSYGRNVVGAFRKFQELGKLEIITTAATHALLPLMATHPPAIRAQIMVARDHYRSCFGTDPHGIWLPECAYTEGIEPVLQEAGIRWFVMDTHGILYATPRPRYGVFAPLFTPNGIAAFGRDLDSARQVWSKHEGYPGDFRYRDFYRDIGFDLDLDYVKPYMPLEGQRTFTGIKYHAITGPTEKRIYDRREALEVAANHAGHFLGERINQMQHLASIMDRPPLVLSPYDAELFGHWWYEGPEFLDYFIRKTVYDQQVIELTTPWEYLRKNPTQQVAAPSASSWGDEGYWKVWLNDTNEWIYPHLQVAQERMTSLARRYPDPTPLQERALKQAGRELLLAQASDWPFILRTGTSPEYARQRVKTHLLRFIALHEQLTSTRVDEPWLERVEWLDNIFADIDYRYWLAQPKSAAVAVEQSPTSDQAKQLSMATQGSAT

Samples

Sample ID Description Type Environment
1 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
4 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
14 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
15 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
16 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
17 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
18 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
19 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
20 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
21 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
22 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
25 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
28 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
29 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
40 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
41 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
42 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
43 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
44 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
45 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
46 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
47 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
48 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
49 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
50 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
51 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
52 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
53 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
54 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
55 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
56 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
57 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
58 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
59 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
60 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
61 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
62 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
63 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
64 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
65 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
66 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
67 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
68 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
69 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
70 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
71 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
72 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
73 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
74 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
75 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
76 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
77 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
78 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
79 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
80 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
81 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
82 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
83 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
84 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
85 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
86 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
87 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
88 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
89 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
90 2786546517 Verrucomicrobia bacterium LW23 Isolate Rhizoplane

Type Distribution

Type Percentage (%)
Metagenomes 99.25
Metatranscriptomes 0
Isolates 0.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.24
Nodule 0
Rhizoplane 1.49
Rhizosphere 94.78
Stem 0
Stem Tuber 0
Unclassified 9.7

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207708_10059483 3300026075 Unclassified 2917
2 rootH2_10023539 3300003320 Bacteria 9806
3 Ga0070689_100093425 3300005340 Bacteria 2374
4 Ga0070689_100128260 3300005340 Bacteria 2032
5 Ga0070688_100020566 3300005365 Bacteria 3839
6 Ga0070709_10051764 3300005434 Bacteria 2578
7 Ga0070714_100004925 3300005435 Bacteria 10150
8 Ga0070711_100000051 3300005439 Bacteria 73775
9 Ga0070679_100226410 3300005530 Unclassified 1830
10 Ga0070665_100000340 3300005548 Bacteria 70986
11 Ga0068855_100016577 3300005563 Bacteria 8861
12 Ga0068857_100090128 3300005577 Bacteria 2744
13 Ga0068856_100000904 3300005614 Bacteria 31737
14 Ga0068856_100041795 3300005614 Unclassified 4507
15 Ga0068859_100014103 3300005617 Bacteria 8015
16 Ga0068864_100040867 3300005618 Bacteria 3965
17 Ga0068863_100140353 3300005841 Bacteria 2309
18 Ga0068858_100003793 3300005842 Bacteria 14945
19 Ga0097621_100198675 3300006237 Bacteria 1740
20 Ga0075428_100003935 3300006844 Bacteria 16296
21 Ga0075433_10078860 3300006852 Bacteria 2902
22 Ga0075434_100005877 3300006871 Bacteria 11212
23 Ga0075436_100131486 3300006914 Bacteria 1755
24 Ga0097620_100014103 3300006931 Bacteria 8015
25 Ga0105240_10001513 3300009093 Bacteria 39550
26 Ga0105240_10025480 3300009093 Bacteria 7771
27 Ga0105240_10053027 3300009093 Bacteria 5094
28 Ga0105242_10008253 3300009176 Bacteria 8000
29 Ga0105237_10002014 3300009545 Bacteria 25856
30 Ga0105238_10009853 3300009551 Bacteria 9574
31 Ga0105238_10049529 3300009551 Bacteria 4230
32 Ga0157374_10040638 3300013296 Bacteria 4284
33 Ga0163163_10000018 3300014325 Bacteria 199503
34 Ga0207695_10019968 3300025913 Bacteria 7692
35 Ga0207695_10029716 3300025913 Bacteria 6030
36 Ga0207671_10012382 3300025914 Bacteria 6861
37 Ga0207663_10000003 3300025916 Bacteria 458807
38 Ga0207694_10021649 3300025924 Bacteria 4872
39 Ga0207664_10010207 3300025929 Bacteria 6629
40 Ga0207670_10103218 3300025936 Bacteria 2040
41 Ga0207703_10002739 3300026035 Bacteria 15092
42 Ga0207702_10000285 3300026078 Bacteria 58642
43 Ga0207702_10174902 3300026078 Bacteria 1972
44 Ga0207674_10010971 3300026116 Bacteria 10196
45 Ga0207674_10136792 3300026116 Bacteria 2411
46 Ga0268266_10000031 3300028379 Bacteria 406292
47 Ga0265337_1000528 3300028556 Bacteria 20276
48 Ga0265337_1010145 3300028556 Bacteria 3314
49 Ga0265337_1015259 3300028556 Unclassified 2520
50 Ga0265326_10016476 3300028558 Unclassified 2136
51 Ga0265319_1000051 3300028563 Bacteria 97169
52 Ga0265319_1002995 3300028563 Bacteria 8976
53 Ga0265319_1021281 3300028563 Unclassified 2384
54 Ga0265323_10002122 3300028653 Bacteria 9246
55 Ga0265338_10000008 3300028800 Bacteria 481542
56 Ga0265338_10000552 3300028800 Bacteria 65513
57 Ga0265338_10001028 3300028800 Bacteria 46692
58 Ga0265338_10001283 3300028800 Bacteria 41225
59 Ga0265338_10001719 3300028800 Bacteria 34724
60 Ga0265338_10007643 3300028800 Bacteria 13335
61 Ga0265338_10008764 3300028800 Bacteria 12225
62 Ga0265338_10021788 3300028800 Bacteria 6661
63 Ga0265338_10022709 3300028800 Bacteria 6480
64 Ga0265338_10036453 3300028800 Unclassified 4706
65 Ga0265338_10039277 3300028800 Bacteria 4468
66 Ga0265338_10040503 3300028800 Bacteria 4375
67 Ga0265338_10043356 3300028800 Unclassified 4174
68 Ga0265338_10109271 3300028800 Bacteria 2231
69 Ga0265338_10128528 3300028800 Unclassified 2006
70 Ga0265324_10000294 3300029957 Bacteria 37201
71 Ga0265324_10000769 3300029957 Bacteria 21141
72 Ga0265324_10009057 3300029957 Bacteria 3907
73 Ga0307511_10000055 3300030521 Bacteria 93861
74 Ga0265328_10004332 3300031239 Bacteria 6169
75 Ga0265320_10000617 3300031240 Bacteria 27228
76 Ga0265320_10006671 3300031240 Bacteria 7253
77 Ga0265320_10009361 3300031240 Bacteria 5914
78 Ga0265320_10036371 3300031240 Bacteria 2488
79 Ga0265329_10001389 3300031242 Bacteria 11718
80 Ga0265340_10000945 3300031247 Bacteria 16538
81 Ga0265339_10061732 3300031249 Bacteria 2016
82 Ga0265316_10013200 3300031344 Bacteria 7357
83 Ga0265316_10025362 3300031344 Bacteria 4949
84 Ga0265316_10066200 3300031344 Bacteria 2797
85 Ga0265316_10081352 3300031344 Unclassified 2483
86 Ga0265313_10003495 3300031595 Bacteria 12675
87 Ga0265313_10006066 3300031595 Bacteria 8713
88 Ga0265314_10000147 3300031711 Bacteria 105307
89 Ga0265314_10004391 3300031711 Bacteria 13111
90 Ga0265314_10052225 3300031711 Bacteria 2842
91 Ga0307413_10115137 3300031824 Bacteria 1809
92 Ga0373930_0000664 3300034816 Bacteria 4811
93 Ga0373928_0000199 3300035084 Bacteria 11527
94 Ga0373944_0000317 3300035089 Bacteria 10775
95 Ga0373949_0004278 3300035090 Bacteria 3288
96 Ga0373932_0000001 3300035112 Bacteria 1459067
97 Ga0373945_0003291 3300035116 Bacteria 5068
98 Ga0373954_0008141 3300035118 Bacteria 4593
99 Ga0316574_0079520 3300035398 Bacteria 2080
100 Ga0373931_0000008 3300035691 Bacteria 362269
101 Ga0373927_0010514 3300035695 Bacteria 6168
102 Ga0373927_0073538 3300035695 Bacteria 2213
103 Ga0373947_0012164 3300035725 Bacteria 4928
104 Ga0373937_0182099 3300036401 Bacteria 1973
105 Ga0373925_0000192 3300037068 Bacteria 66343
106 Ga0373925_0003698 3300037068 Bacteria 11747
107 Ga0451577_0003179 3300042876 Bacteria 18494
108 Ga0451576_0125882 3300045051 Bacteria 2670
109 Ga0451576_0163754 3300045051 Unclassified 2321
110 Ga0495592_0000101 3300046454 Bacteria 75856
111 Ga0495641_0012003 3300046461 Bacteria 4882
112 Ga0495618_0005286 3300046514 Bacteria 7888
113 Ga0495652_0037245 3300046529 Bacteria 4221
114 Ga0495640_0019683 3300046533 Bacteria 4979
115 Ga0495586_0003033 3300046535 Bacteria 9057
116 Ga0495645_0056787 3300046543 Bacteria 2842
117 Ga0495599_0011988 3300046678 Bacteria 5333
118 Ga0495658_0003715 3300046683 Bacteria 7549
119 Ga0495658_0053023 3300046683 Unclassified 2302
120 Ga0495613_0047841 3300046689 Bacteria 3159
121 Ga0495613_0117686 3300046689 Unclassified 1910
122 Ga0495624_0027851 3300046690 Bacteria 3696
123 Ga0495674_0008424 3300047319 Bacteria 9823
124 Ga0495675_0036813 3300047444 Bacteria 3119
125 Ga0495684_0059219 3300047471 Bacteria 2917
126 Ga0496115_0006150 3300048918 Bacteria 8781
127 nmdc:mga0n895_1060_c1 3300050512 Bacteria 20042
128 nmdc:mga0n895_174394_c1 3300050512 Bacteria 2181
129 nmdc:mga08x19_10_c1 3300050514 Bacteria 404490
130 nmdc:mga08x19_21561_c1 3300050514 Bacteria 3980
131 Ga0500555_000029 3300053103 Bacteria 103966
132 Ga0500616_0018458 3300053153 Bacteria 3944
133 Ga0500645_014858 3300053730 Bacteria 2476
134 2787438923 2786546517 Bacteria 6614109
135 Ga0207708_10059483
136 rootH2_10023539
137 Ga0070689_100093425
138 Ga0070689_100128260
139 Ga0070688_100020566
140 Ga0070709_10051764
141 Ga0070714_100004925
142 Ga0070711_100000051
143 Ga0070679_100226410
144 Ga0070665_100000340
145 Ga0068855_100016577
146 Ga0068857_100090128
147 Ga0068856_100000904
148 Ga0068856_100041795
149 Ga0068859_100014103
150 Ga0068864_100040867
151 Ga0068863_100140353
152 Ga0068858_100003793
153 Ga0097621_100198675
154 Ga0075428_100003935
155 Ga0075433_10078860
156 Ga0075434_100005877
157 Ga0075436_100131486
158 Ga0097620_100014103
159 Ga0105240_10001513
160 Ga0105240_10025480
161 Ga0105240_10053027
162 Ga0105242_10008253
163 Ga0105237_10002014
164 Ga0105238_10009853
165 Ga0105238_10049529
166 Ga0157374_10040638
167 Ga0163163_10000018
168 Ga0207695_10019968
169 Ga0207695_10029716
170 Ga0207671_10012382
171 Ga0207663_10000003
172 Ga0207694_10021649
173 Ga0207664_10010207
174 Ga0207670_10103218
175 Ga0207703_10002739
176 Ga0207702_10000285
177 Ga0207702_10174902
178 Ga0207674_10010971
179 Ga0207674_10136792
180 Ga0268266_10000031
181 Ga0265337_1000528
182 Ga0265337_1010145
183 Ga0265337_1015259
184 Ga0265326_10016476
185 Ga0265319_1000051
186 Ga0265319_1002995
187 Ga0265319_1021281
188 Ga0265323_10002122
189 Ga0265338_10000008
190 Ga0265338_10000552
191 Ga0265338_10001028
192 Ga0265338_10001283
193 Ga0265338_10001719
194 Ga0265338_10007643
195 Ga0265338_10008764
196 Ga0265338_10021788
197 Ga0265338_10022709
198 Ga0265338_10036453
199 Ga0265338_10039277
200 Ga0265338_10040503
201 Ga0265338_10043356
202 Ga0265338_10109271
203 Ga0265338_10128528
204 Ga0265324_10000294
205 Ga0265324_10000769
206 Ga0265324_10009057
207 Ga0307511_10000055
208 Ga0265328_10004332
209 Ga0265320_10000617
210 Ga0265320_10006671
211 Ga0265320_10009361
212 Ga0265320_10036371
213 Ga0265329_10001389
214 Ga0265340_10000945
215 Ga0265339_10061732
216 Ga0265316_10013200
217 Ga0265316_10025362
218 Ga0265316_10066200
219 Ga0265316_10081352
220 Ga0265313_10003495
221 Ga0265313_10006066
222 Ga0265314_10000147
223 Ga0265314_10004391
224 Ga0265314_10052225
225 Ga0307413_10115137
226 Ga0373930_0000664
227 Ga0373928_0000199
228 Ga0373944_0000317
229 Ga0373949_0004278
230 Ga0373932_0000001
231 Ga0373945_0003291
232 Ga0373954_0008141
233 Ga0316574_0079520
234 Ga0373931_0000008
235 Ga0373927_0010514
236 Ga0373927_0073538
237 Ga0373947_0012164
238 Ga0373937_0182099
239 Ga0373925_0000192
240 Ga0373925_0003698
241 Ga0451577_0003179
242 Ga0451576_0125882
243 Ga0451576_0163754
244 Ga0495592_0000101
245 Ga0495641_0012003
246 Ga0495618_0005286
247 Ga0495652_0037245
248 Ga0495640_0019683
249 Ga0495586_0003033
250 Ga0495645_0056787
251 Ga0495599_0011988
252 Ga0495658_0003715
253 Ga0495658_0053023
254 Ga0495613_0047841
255 Ga0495613_0117686
256 Ga0495624_0027851
257 Ga0495674_0008424
258 Ga0495675_0036813
259 Ga0495684_0059219
260 Ga0496115_0006150
261 nmdc:mga0n895_1060_c1
262 nmdc:mga0n895_174394_c1
263 nmdc:mga08x19_10_c1
264 nmdc:mga08x19_21561_c1
265 Ga0500555_000029
266 Ga0500616_0018458
267 Ga0500645_014858
268 2787438923

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09210

BE_C

1,4-alpha-glucan branching enzyme, C-terminal

422

522

0.99

PF03065

Glyco_hydro_57

Glycosyl hydrolase family 57

6

398

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
2b5d-assembly1.cif.gz_X crystal structure of the novel alpha-amylase amyc from thermotoga maritima 0.8961 5 515
2b5d-assembly1.cif.gz_X crystal structure of the novel alpha-amylase amyc from thermotoga maritima 0.8861 5 515
5wu7-assembly2.cif.gz_B crystal structure of gh57-type branching enzyme from hyperthermophilic archaeon pyrococcus horikoshii 0.8832 4 516
5wu7-assembly2.cif.gz_B crystal structure of gh57-type branching enzyme from hyperthermophilic archaeon pyrococcus horikoshii 0.8767 4 516
3n92-assembly1.cif.gz_A crystal structure of tk1436, a gh57 branching enzyme from hyperthermophilic archaeon thermococcus kodakaraensis, in complex with glucose 0.8735 4 516
ID Description Score Start End Superfamily
3n98A02 Mainly Alpha;Up-down Bundle;immunoglobulin/albumin-binding domain-like;Families 57/38 glycoside transferase, middle domain 0.9318 406 516 1.20.1430.10
5wu7B02 Mainly Alpha;Up-down Bundle;immunoglobulin/albumin-binding domain-like;Families 57/38 glycoside transferase, middle domain 0.9211 406 516 1.20.1430.10
2b5dX02 Mainly Alpha;Up-down Bundle;immunoglobulin/albumin-binding domain-like;Families 57/38 glycoside transferase, middle domain 0.9068 409 515 1.20.1430.10
2b5dX01 Alpha Beta;Alpha-Beta Barrel;7-stranded beta/alpha barrel;Glycoside hydrolase 38, N terminal domain 0.9012 5 397 3.20.110.10
2b5dX01 Alpha Beta;Alpha-Beta Barrel;7-stranded beta/alpha barrel;Glycoside hydrolase 38, N terminal domain 0.8752 5 397 3.20.110.10
ID Description Score Start End GO Terms
AF-A0A2J0N4M5-F1-model_v4 DUF1957 domain-containing protein 0.9979 5 138 GO:0003844
GO:0005576
GO:0030979
AF-A0A2V6F338-F1-model_v4 DUF1957 domain-containing protein 0.9967 5 119 GO:0003844
GO:0005576
GO:0030979
AF-A0A4V6F2N8-F1-model_v4 deleted 0.996 5 156
AF-A0A350NKS0-F1-model_v4 DUF1957 domain-containing protein 0.9933 5 210 GO:0003844
GO:0005576
GO:0030979
AF-A0A7W0J5G7-F1-model_v4 DUF1957 domain-containing protein 0.9924 5 119 GO:0003844
GO:0005576
GO:0030979

Map