F149549

General Info

Members Datasets Scaffolds Average Seq Length
131 82 262 472

Family's Representative Sequence

Representative Sequence 3300028379|Ga0268266_10090290|Ga0268266_100902902
Length 507
Sequence MSSPCSEPSITNGSEPSANGAVPSPAKVCEAIPAGAREELIAAIGARGILDRPEDLALYEYDGSVDKVRPAMVVFPRTTEDVVKIVQITGKYNIPIVGRGSGTGLSGGAIPRSGGVVIGFSRMNKILELDLENERAVLQPGVINLDITLAVQAMGYFYAPDPSSQRACTIGGNVSENAGGPHTLAYGVTTNHVLGLEFVLPDGKVYTTGGKEQDLPGLDVTGLLTGSEGTMALVTKIIVRLMRQPEVVKTLLAIYDSPDHCADTVAEITARAITPVAVEMLDGEMLAMVEAATHAGYPPDAAAVLLIELEGLTEGVTEQVEQIRSVCTSCRAREVRVAKDSEERDLLWKGRKNAFGAVGRVSTSYYVQDGVVPRTQIAPTLRHIAKVGAKHGVRISNIFHAGDGNMHPIILFDLHKPGDIEKAKAAGEDILQYCIDVGGSITGEHGVGMEKNEMMPRLFTPETLETIGRFKRLFDPENRLNPGKVLPTGKGCLEIRQAPLSAASRVY

Samples

Sample ID Description Type Environment
1 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
19 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
20 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
21 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
22 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
24 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
25 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
26 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
27 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
28 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
29 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
30 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
41 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
42 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
43 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
44 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
45 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
46 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
47 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
48 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
49 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
50 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
51 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
52 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
53 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
54 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
55 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
56 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
57 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
58 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
59 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
60 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
61 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
62 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
63 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
64 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
65 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
66 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
67 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
68 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
69 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
70 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
71 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
76 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
77 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
79 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
80 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
81 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
82 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 87.79
Stem 0
Stem Tuber 0
Unclassified 0.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0268266_10090290 3300028379 Bacteria 2685
2 Ga0070658_10005070 3300005327 Bacteria 10719
3 Ga0070658_10074162 3300005327 Bacteria 2790
4 Ga0070683_100000008 3300005329 Bacteria 329206
5 Ga0070680_100009976 3300005336 Bacteria 7315
6 Ga0070680_100099216 3300005336 Bacteria 2417
7 Ga0070689_100097317 3300005340 Bacteria 2327
8 Ga0070673_100115829 3300005364 Bacteria 2229
9 Ga0070714_100002458 3300005435 Bacteria 13678
10 Ga0070711_100034254 3300005439 Bacteria 3387
11 Ga0070681_10007766 3300005458 Bacteria 10487
12 Ga0070681_10033134 3300005458 Bacteria 5185
13 Ga0070699_100072264 3300005518 Bacteria 3001
14 Ga0070699_100134645 3300005518 Bacteria 2179
15 Ga0070684_100000002 3300005535 Bacteria 257669
16 Ga0068853_100165189 3300005539 Bacteria 2000
17 Ga0070672_100128079 3300005543 Bacteria 2084
18 Ga0070665_100090281 3300005548 Bacteria 3069
19 Ga0068855_100058370 3300005563 Bacteria 4519
20 Ga0068855_100087408 3300005563 Bacteria 3603
21 Ga0068856_100066666 3300005614 Bacteria 3557
22 Ga0070717_10037718 3300006028 Bacteria 3926
23 Ga0075428_100334323 3300006844 Bacteria 1627
24 Ga0075431_100002662 3300006847 Bacteria 17292
25 Ga0075431_100011663 3300006847 Bacteria 8867
26 Ga0075434_100053135 3300006871 Bacteria 4026
27 Ga0105240_10002162 3300009093 Bacteria 32095
28 Ga0105240_10002782 3300009093 Bacteria 27645
29 Ga0105240_10003077 3300009093 Bacteria 26206
30 Ga0114129_10152526 3300009147 Bacteria 3161
31 Ga0105248_10078104 3300009177 Bacteria 3722
32 Ga0105248_10132048 3300009177 Bacteria 2817
33 Ga0105237_10002167 3300009545 Bacteria 24657
34 Ga0105237_10013105 3300009545 Bacteria 8705
35 Ga0157370_10013226 3300013104 Bacteria 8505
36 Ga0157369_10004811 3300013105 Bacteria 15860
37 Ga0157369_10167465 3300013105 Bacteria 2317
38 Ga0157372_10016960 3300013307 Bacteria 7819
39 Ga0163163_10075889 3300014325 Bacteria 3355
40 Ga0163163_10146788 3300014325 Bacteria 2403
41 Ga0213875_10000008 3300021388 Bacteria 533344
42 Ga0213875_10000029 3300021388 Bacteria 182973
43 Ga0213875_10019499 3300021388 Bacteria 3263
44 Ga0213875_10029368 3300021388 Bacteria 2607
45 Ga0207707_10006363 3300025912 Bacteria 10311
46 Ga0207707_10143954 3300025912 Bacteria 2083
47 Ga0207695_10004712 3300025913 Bacteria 18475
48 Ga0207695_10048344 3300025913 Bacteria 4493
49 Ga0207671_10008780 3300025914 Bacteria 8514
50 Ga0207663_10055122 3300025916 Bacteria 2493
51 Ga0207664_10002238 3300025929 Bacteria 12739
52 Ga0207711_10015174 3300025941 Bacteria 6397
53 Ga0207661_10000008 3300025944 Bacteria 451211
54 Ga0207667_10040026 3300025949 Bacteria 4990
55 Ga0207651_10042246 3300025960 Bacteria 3033
56 Ga0207641_10049716 3300026088 Bacteria 3544
57 Ga0268266_10041989 3300028379 Bacteria 3905
58 Ga0265325_10042591 3300031241 Bacteria 2373
59 Ga0265316_10003372 3300031344 Bacteria 16181
60 Ga0265316_10084102 3300031344 Bacteria 2437
61 Ga0373934_0059046 3300035086 Bacteria 1527
62 Ga0373927_0000695 3300035695 Bacteria 25717
63 Ga0373927_0001104 3300035695 Bacteria 20517
64 Ga0373947_0000323 3300035725 Bacteria 27109
65 Ga0373937_0049110 3300036401 Bacteria 3864
66 Ga0373937_0105149 3300036401 Bacteria 2623
67 Ga0373925_0000282 3300037068 Bacteria 53199
68 Ga0373925_0064640 3300037068 Bacteria 2754
69 Ga0373925_0133312 3300037068 Bacteria 1939
70 Ga0436364_0265488 3300037853 Bacteria 17133
71 Ga0436364_0295878 3300037853 Bacteria 10776
72 Ga0436364_0331988 3300037853 Bacteria 5026
73 Ga0436364_0364416 3300037853 Bacteria 84577
74 Ga0436364_0635385 3300037853 Bacteria 3733
75 Ga0436364_1145667 3300037853 Bacteria 5119
76 Ga0436364_1366842 3300037853 Bacteria 2351
77 Ga0436364_1415525 3300037853 Bacteria 425173
78 Ga0436365_1033265 3300039437 Unclassified 3177
79 Ga0436365_1072274 3300039437 Bacteria 1996
80 Ga0436365_1091552 3300039437 Bacteria 13503
81 Ga0436360_0544098 3300039438 Bacteria 2506
82 Ga0466967_0093384 3300045976 Bacteria 2738
83 Ga0495592_0081203 3300046454 Bacteria 2344
84 Ga0495651_0054913 3300046462 Bacteria 3061
85 Ga0495651_0134796 3300046462 Bacteria 1798
86 Ga0495580_0013862 3300046472 Bacteria 6139
87 Ga0495580_0023856 3300046472 Bacteria 4485
88 Ga0495580_0035191 3300046472 Bacteria 3602
89 Ga0495580_0036158 3300046472 Bacteria 3547
90 Ga0495664_0026115 3300046477 Bacteria 3401
91 Ga0495608_0031833 3300046511 Bacteria 3565
92 Ga0495628_0029991 3300046516 Bacteria 4405
93 Ga0495628_0088540 3300046516 Bacteria 2399
94 Ga0495630_0017827 3300046517 Bacteria 5207
95 Ga0495665_0048911 3300046531 Bacteria 2242
96 Ga0495665_0079075 3300046531 Bacteria 1730
97 Ga0495587_0024833 3300046536 Bacteria 3669
98 Ga0495587_0079223 3300046536 Bacteria 1905
99 Ga0495667_0026635 3300046559 Bacteria 3896
100 Ga0495667_0045443 3300046559 Bacteria 2908
101 Ga0495667_0100975 3300046559 Bacteria 1867
102 Ga0495634_0072830 3300046642 Bacteria 2259
103 Ga0495635_0076107 3300046663 Bacteria 2300
104 Ga0495635_0111791 3300046663 Bacteria 1866
105 Ga0495599_0029515 3300046678 Bacteria 3438
106 Ga0495613_0042520 3300046689 Bacteria 3362
107 Ga0495674_0028739 3300047319 Bacteria 5066
108 Ga0495674_0047334 3300047319 Bacteria 3814
109 Ga0495674_0068871 3300047319 Bacteria 3061
110 Ga0495674_0101737 3300047319 Bacteria 2444
111 Ga0495680_0008013 3300047322 Bacteria 9632
112 Ga0495675_0062663 3300047444 Bacteria 2354
113 Ga0495684_0005830 3300047471 Bacteria 9572
114 Ga0495602_0031611 3300048088 Bacteria 5001
115 Ga0496126_0068958 3300048929 Bacteria 3156
116 Ga0501036_0161950 3300049572 Bacteria 1886
117 Ga0501038_0028066 3300049574 Bacteria 5001
118 Ga0501046_0072060 3300049580 Bacteria 2683
119 Ga0501047_0013528 3300049581 Bacteria 7737
120 Ga0501047_0057212 3300049581 Bacteria 3771
121 Ga0501070_0027103 3300049586 Bacteria 4807
122 Ga0501249_005670 3300049679 Bacteria 2551
123 Ga0501035_0125776 3300049822 Bacteria 2238
124 Ga0501044_0001647 3300049823 Bacteria 26223
125 Ga0501044_0030935 3300049823 Bacteria 5636
126 nmdc:mga0qj67_101243_c1 3300050509 Bacteria 2322
127 nmdc:mga0qj67_14665_c1 3300050509 Bacteria 5925
128 nmdc:mga06r32_20926_c1 3300050510 Bacteria 6031
129 nmdc:mga06r32_23012_c1 3300050510 Bacteria 5763
130 nmdc:mga08x19_1353_c1 3300050514 Bacteria 15190
131 Ga0501082_0000308 3300060353 Bacteria 43386
132 Ga0268266_10090290
133 Ga0070658_10005070
134 Ga0070658_10074162
135 Ga0070683_100000008
136 Ga0070680_100009976
137 Ga0070680_100099216
138 Ga0070689_100097317
139 Ga0070673_100115829
140 Ga0070714_100002458
141 Ga0070711_100034254
142 Ga0070681_10007766
143 Ga0070681_10033134
144 Ga0070699_100072264
145 Ga0070699_100134645
146 Ga0070684_100000002
147 Ga0068853_100165189
148 Ga0070672_100128079
149 Ga0070665_100090281
150 Ga0068855_100058370
151 Ga0068855_100087408
152 Ga0068856_100066666
153 Ga0070717_10037718
154 Ga0075428_100334323
155 Ga0075431_100002662
156 Ga0075431_100011663
157 Ga0075434_100053135
158 Ga0105240_10002162
159 Ga0105240_10002782
160 Ga0105240_10003077
161 Ga0114129_10152526
162 Ga0105248_10078104
163 Ga0105248_10132048
164 Ga0105237_10002167
165 Ga0105237_10013105
166 Ga0157370_10013226
167 Ga0157369_10004811
168 Ga0157369_10167465
169 Ga0157372_10016960
170 Ga0163163_10075889
171 Ga0163163_10146788
172 Ga0213875_10000008
173 Ga0213875_10000029
174 Ga0213875_10019499
175 Ga0213875_10029368
176 Ga0207707_10006363
177 Ga0207707_10143954
178 Ga0207695_10004712
179 Ga0207695_10048344
180 Ga0207671_10008780
181 Ga0207663_10055122
182 Ga0207664_10002238
183 Ga0207711_10015174
184 Ga0207661_10000008
185 Ga0207667_10040026
186 Ga0207651_10042246
187 Ga0207641_10049716
188 Ga0268266_10041989
189 Ga0265325_10042591
190 Ga0265316_10003372
191 Ga0265316_10084102
192 Ga0373934_0059046
193 Ga0373927_0000695
194 Ga0373927_0001104
195 Ga0373947_0000323
196 Ga0373937_0049110
197 Ga0373937_0105149
198 Ga0373925_0000282
199 Ga0373925_0064640
200 Ga0373925_0133312
201 Ga0436364_0265488
202 Ga0436364_0295878
203 Ga0436364_0331988
204 Ga0436364_0364416
205 Ga0436364_0635385
206 Ga0436364_1145667
207 Ga0436364_1366842
208 Ga0436364_1415525
209 Ga0436365_1033265
210 Ga0436365_1072274
211 Ga0436365_1091552
212 Ga0436360_0544098
213 Ga0466967_0093384
214 Ga0495592_0081203
215 Ga0495651_0054913
216 Ga0495651_0134796
217 Ga0495580_0013862
218 Ga0495580_0023856
219 Ga0495580_0035191
220 Ga0495580_0036158
221 Ga0495664_0026115
222 Ga0495608_0031833
223 Ga0495628_0029991
224 Ga0495628_0088540
225 Ga0495630_0017827
226 Ga0495665_0048911
227 Ga0495665_0079075
228 Ga0495587_0024833
229 Ga0495587_0079223
230 Ga0495667_0026635
231 Ga0495667_0045443
232 Ga0495667_0100975
233 Ga0495634_0072830
234 Ga0495635_0076107
235 Ga0495635_0111791
236 Ga0495599_0029515
237 Ga0495613_0042520
238 Ga0495674_0028739
239 Ga0495674_0047334
240 Ga0495674_0068871
241 Ga0495674_0101737
242 Ga0495680_0008013
243 Ga0495675_0062663
244 Ga0495684_0005830
245 Ga0495602_0031611
246 Ga0496126_0068958
247 Ga0501036_0161950
248 Ga0501038_0028066
249 Ga0501046_0072060
250 Ga0501047_0013528
251 Ga0501047_0057212
252 Ga0501070_0027103
253 Ga0501249_005670
254 Ga0501035_0125776
255 Ga0501044_0001647
256 Ga0501044_0030935
257 nmdc:mga0qj67_101243_c1
258 nmdc:mga0qj67_14665_c1
259 nmdc:mga06r32_20926_c1
260 nmdc:mga06r32_23012_c1
261 nmdc:mga08x19_1353_c1
262 Ga0501082_0000308

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01565

FAD_binding_4

FAD binding domain

70

209

0.99

PF02913

FAD-oxidase_C

FAD linked oxidases, C-terminal domain

244

485

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
8jdt-assembly1.cif.gz_A crystal structure of mldhd in complex with 2-ketobutanoic acid 0.9114 15 466
8jds-assembly1.cif.gz_A crystal structure of mldhd in complex with pyruvate 0.9107 15 466
8jdo-assembly1.cif.gz_A crystal structure of h405a mldhd in complex with d-2-hydroxyhexanoic acid 0.9078 15 466
8jdp-assembly1.cif.gz_A crystal structure of h405a mldhd in complex with d-2-hydroxyisovaleric acid 0.9077 15 466
7qh2-assembly1.cif.gz_F cryo-em structure of ldh-etfab complex from acetobacterium woodii 0.9057 11 465
ID Description Score Start End Superfamily
af_P0AEP9_350_431_3.30.70.2740 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9896 344 425 3.30.70.2740
af_P0AEP9_231_349_3.30.70.2190 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9843 225 343 3.30.70.2190
af_P0AEP9_350_431_3.30.70.2740 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9778 344 425 3.30.70.2740
af_P0AEP9_231_349_3.30.70.2190 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9762 225 343 3.30.70.2190
af_Q11061_332_414_3.30.70.2740 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9648 344 425 3.30.70.2740
ID Description Score Start End GO Terms
AF-T0ZT88-F1-model_v4 Glycolate oxidase, subunit GlcD 0.9815 239 426 GO:0003824
GO:0050660
AF-A0A5R2MXL6-F1-model_v4 FAD-binding oxidoreductase 0.9672 233 346 GO:0003824
GO:0050660
AF-T0ZT88-F1-model_v4 Glycolate oxidase, subunit GlcD 0.9663 239 426 GO:0003824
GO:0050660
AF-A0A3N5JVY0-F1-model_v4 FAD-binding protein 0.948 116 467 GO:0003824
GO:0071949
AF-A0A2V9JHT1-F1-model_v4 FAD-binding oxidoreductase 0.9478 15 467 GO:0003824
GO:0071949

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