F133030
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 127 | 110 | 127 | 261 |
Family's Representative Sequence
| Representative Sequence | 3300005333|Ga0070677_10000044|Ga0070677_1000004433 |
| Length | 272 |
| Sequence | MPRLAVLGYPVGHSRSPVMQSAALAELGLGDEWSYEAIEVAPDAFEQRVRAMAGEGFAGANVTVPHKGAALALADELSETAREIGAANTLVFTHNGESGEAEEAVIRAENTDAEGLLRALPGPSRDRRALVLGAGGAARAVVWALLREGAEVEVWNRTELRSRHLCEELGGAPVAAPDQSAYELIVNTTAVGLAGEDPFAELPLSQDGFAPEQTVVDMVYGGEPTALLRAAEAAGASTVDGIEILVQQGALSLEIWTGRPAPLDTMRAAARG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300001977 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 | Metagenome | Rhizosphere |
| 2 | 3300002239 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 | Metagenome | Rhizosphere |
| 3 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 4 | 3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 8 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 10 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 11 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 12 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 13 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 16 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 17 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 18 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 19 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 20 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 21 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 22 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 23 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 24 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 25 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 26 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 27 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 32 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 33 | 3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 53 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 54 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 55 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 56 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 57 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 58 | 3300046458 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere | Metagenome | Rhizosphere |
| 59 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 60 | 3300046461 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere | Metagenome | Rhizosphere |
| 61 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 62 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 63 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 64 | 3300046515 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere | Metagenome | Rhizosphere |
| 65 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 66 | 3300046523 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere | Metagenome | Rhizosphere |
| 67 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 68 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 69 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 70 | 3300046537 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300047469 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 88 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 89 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 90 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 91 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 92 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 93 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 94 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 95 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 96 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 97 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 98 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 99 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 100 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 101 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 102 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 103 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 104 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300053094 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere | Metagenome | Endosphere |
| 109 | 3300053123 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere | Metagenome | Endosphere |
| 110 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 3.15 |
| Nodule | 0 |
| Rhizoplane | 11.81 |
| Rhizosphere | 83.46 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 1.57 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24746J21847_1000152 | 3300001977 | Bacteria | 8756 |
| 2 | JGI24034J26672_10005572 | 3300002239 | Bacteria | 1806 |
| 3 | Ga0070683_100223815 | 3300005329 | Bacteria | 1788 |
| 4 | Ga0070677_10000044 | 3300005333 | Bacteria | 39119 |
| 5 | Ga0070673_100002354 | 3300005364 | Bacteria | 11482 |
| 6 | Ga0070711_100004900 | 3300005439 | Bacteria | 7948 |
| 7 | Ga0070700_100096602 | 3300005441 | Bacteria | 1939 |
| 8 | Ga0070700_100263430 | 3300005441 | Bacteria | 1242 |
| 9 | Ga0070662_100000002 | 3300005457 | Bacteria | 253208 |
| 10 | Ga0070681_10137628 | 3300005458 | Bacteria | 2372 |
| 11 | Ga0068867_100000750 | 3300005459 | Bacteria | 21786 |
| 12 | Ga0070684_100038677 | 3300005535 | Bacteria | 4100 |
| 13 | Ga0070695_100381148 | 3300005545 | Bacteria | 1064 |
| 14 | Ga0070693_100037307 | 3300005547 | Bacteria | 2709 |
| 15 | Ga0070665_100000141 | 3300005548 | Bacteria | 135473 |
| 16 | Ga0068855_100208267 | 3300005563 | Bacteria | 2199 |
| 17 | Ga0068854_100025915 | 3300005578 | Bacteria | 4025 |
| 18 | Ga0068856_100311765 | 3300005614 | Unclassified | 1591 |
| 19 | Ga0068852_100546979 | 3300005616 | Bacteria | 1158 |
| 20 | Ga0068859_100120350 | 3300005617 | Bacteria | 2692 |
| 21 | Ga0068864_100000015 | 3300005618 | Bacteria | 303368 |
| 22 | Ga0068863_100039572 | 3300005841 | Bacteria | 4485 |
| 23 | Ga0068858_100001913 | 3300005842 | Bacteria | 21241 |
| 24 | Ga0068858_100065135 | 3300005842 | Bacteria | 3372 |
| 25 | Ga0075364_10027210 | 3300006051 | Bacteria | 3652 |
| 26 | Ga0075431_100221562 | 3300006847 | Bacteria | 1930 |
| 27 | Ga0075433_10000002 | 3300006852 | Bacteria | 92986 |
| 28 | Ga0075434_100467673 | 3300006871 | Bacteria | 1282 |
| 29 | Ga0097620_100120347 | 3300006931 | Bacteria | 2692 |
| 30 | Ga0105245_10000315 | 3300009098 | Bacteria | 46041 |
| 31 | Ga0105245_10001571 | 3300009098 | Bacteria | 20730 |
| 32 | Ga0105238_10000048 | 3300009551 | Bacteria | 146322 |
| 33 | Ga0105249_10000076 | 3300009553 | Bacteria | 144450 |
| 34 | Ga0157375_10000171 | 3300013308 | Bacteria | 61181 |
| 35 | Ga0157375_10372831 | 3300013308 | Bacteria | 1593 |
| 36 | Ga0157380_10001547 | 3300014326 | Bacteria | 15125 |
| 37 | Ga0207682_10000497 | 3300025893 | Bacteria | 18104 |
| 38 | Ga0207707_10113094 | 3300025912 | Bacteria | 2373 |
| 39 | Ga0207663_10002979 | 3300025916 | Bacteria | 8190 |
| 40 | Ga0207660_10061803 | 3300025917 | Bacteria | 2697 |
| 41 | Ga0207652_10000211 | 3300025921 | Bacteria | 61784 |
| 42 | Ga0207694_10000056 | 3300025924 | Bacteria | 146908 |
| 43 | Ga0207687_10000112 | 3300025927 | Bacteria | 58074 |
| 44 | Ga0207687_10004413 | 3300025927 | Bacteria | 9386 |
| 45 | Ga0207706_10000001 | 3300025933 | Bacteria | 423014 |
| 46 | Ga0207661_10183097 | 3300025944 | Bacteria | 1831 |
| 47 | Ga0207712_10000052 | 3300025961 | Bacteria | 152874 |
| 48 | Ga0207640_10019228 | 3300025981 | Bacteria | 4032 |
| 49 | Ga0207703_10000061 | 3300026035 | Bacteria | 132671 |
| 50 | Ga0207703_10039826 | 3300026035 | Bacteria | 3758 |
| 51 | Ga0207708_10087978 | 3300026075 | Bacteria | 2393 |
| 52 | Ga0207702_10254034 | 3300026078 | Unclassified | 1652 |
| 53 | Ga0207641_10063306 | 3300026088 | Bacteria | 3159 |
| 54 | Ga0207648_10001987 | 3300026089 | Bacteria | 22343 |
| 55 | Ga0207676_10000018 | 3300026095 | Bacteria | 306375 |
| 56 | Ga0207675_100351428 | 3300026118 | Bacteria | 1445 |
| 57 | Ga0268266_10000056 | 3300028379 | Bacteria | 289176 |
| 58 | Ga0265319_1000014 | 3300028563 | Bacteria | 177623 |
| 59 | Ga0265338_10000244 | 3300028800 | Bacteria | 100528 |
| 60 | Ga0265325_10014235 | 3300031241 | Bacteria | 4500 |
| 61 | Ga0373937_0229193 | 3300036401 | Bacteria | 1749 |
| 62 | Ga0451853_1286712 | 3300041512 | Bacteria | 3848 |
| 63 | Ga0495592_0000078 | 3300046454 | Bacteria | 85591 |
| 64 | Ga0495591_024560 | 3300046458 | Bacteria | 1908 |
| 65 | Ga0495629_0001644 | 3300046459 | Bacteria | 17549 |
| 66 | Ga0495641_0000005 | 3300046461 | Bacteria | 206626 |
| 67 | Ga0495641_0047642 | 3300046461 | Bacteria | 1967 |
| 68 | Ga0495582_0000009 | 3300046473 | Bacteria | 123633 |
| 69 | Ga0495662_0000001 | 3300046476 | Bacteria | 179185 |
| 70 | Ga0495618_0000014 | 3300046514 | Bacteria | 163136 |
| 71 | Ga0495620_0000092 | 3300046515 | Bacteria | 72050 |
| 72 | Ga0495628_0011425 | 3300046516 | Bacteria | 7510 |
| 73 | Ga0495628_0116991 | 3300046516 | Bacteria | 2047 |
| 74 | Ga0495644_0000139 | 3300046523 | Bacteria | 35023 |
| 75 | Ga0495652_0004565 | 3300046529 | Bacteria | 13204 |
| 76 | Ga0495640_0021936 | 3300046533 | Bacteria | 4677 |
| 77 | Ga0495640_0159809 | 3300046533 | Bacteria | 1444 |
| 78 | Ga0495587_0083359 | 3300046536 | Bacteria | 1852 |
| 79 | Ga0495598_0001157 | 3300046537 | Bacteria | 5088 |
| 80 | Ga0495645_0034482 | 3300046543 | Bacteria | 3692 |
| 81 | Ga0495667_0000045 | 3300046559 | Bacteria | 118562 |
| 82 | Ga0495656_0000931 | 3300046615 | Bacteria | 9472 |
| 83 | Ga0495634_0000045 | 3300046642 | Bacteria | 99087 |
| 84 | Ga0495634_0033453 | 3300046642 | Bacteria | 3533 |
| 85 | Ga0495635_0000031 | 3300046663 | Bacteria | 110244 |
| 86 | Ga0495599_0004033 | 3300046678 | Bacteria | 8644 |
| 87 | Ga0495647_0000021 | 3300046681 | Bacteria | 72778 |
| 88 | Ga0495658_0000002 | 3300046683 | Bacteria | 309651 |
| 89 | Ga0495669_0000051 | 3300046684 | Bacteria | 80128 |
| 90 | Ga0495613_0000005 | 3300046689 | Bacteria | 222558 |
| 91 | Ga0495649_0002413 | 3300046694 | Bacteria | 13181 |
| 92 | Ga0495604_0000067 | 3300047317 | Bacteria | 90345 |
| 93 | Ga0495674_0000010 | 3300047319 | Bacteria | 285794 |
| 94 | Ga0495676_0000956 | 3300047321 | Bacteria | 24242 |
| 95 | Ga0495680_0000114 | 3300047322 | Bacteria | 76486 |
| 96 | Ga0495680_0000267 | 3300047322 | Bacteria | 57953 |
| 97 | Ga0495680_0000602 | 3300047322 | Bacteria | 40540 |
| 98 | Ga0495673_0020260 | 3300047469 | Bacteria | 3315 |
| 99 | Ga0496100_0000061 | 3300048903 | Bacteria | 63790 |
| 100 | Ga0496101_0000141 | 3300048904 | Bacteria | 63790 |
| 101 | Ga0496102_0163070 | 3300048905 | Bacteria | 2097 |
| 102 | Ga0496104_0000025 | 3300048907 | Bacteria | 228519 |
| 103 | Ga0496105_0000023 | 3300048908 | Bacteria | 156126 |
| 104 | Ga0496106_0000030 | 3300048909 | Bacteria | 136804 |
| 105 | Ga0496106_0000094 | 3300048909 | Bacteria | 67511 |
| 106 | Ga0496107_0000045 | 3300048910 | Bacteria | 67420 |
| 107 | Ga0496108_0000164 | 3300048911 | Bacteria | 62669 |
| 108 | Ga0496109_0000180 | 3300048912 | Bacteria | 62669 |
| 109 | Ga0496111_0281172 | 3300048914 | Unclassified | 1234 |
| 110 | Ga0496114_0000171 | 3300048917 | Bacteria | 46036 |
| 111 | Ga0496114_0008493 | 3300048917 | Bacteria | 8140 |
| 112 | Ga0496115_0000011 | 3300048918 | Bacteria | 222529 |
| 113 | Ga0496115_0001687 | 3300048918 | Bacteria | 15870 |
| 114 | Ga0496125_0148002 | 3300048928 | Bacteria | 1619 |
| 115 | Ga0501042_0015204 | 3300049578 | Bacteria | 5266 |
| 116 | Ga0501075_0001056 | 3300049591 | Bacteria | 17694 |
| 117 | nmdc:mga00v17_14421_c1 | 3300050491 | Bacteria | 4410 |
| 118 | nmdc:mga0a205_13_c1 | 3300050515 | Bacteria | 111131 |
| 119 | Ga0495601_0000071 | 3300053077 | Bacteria | 56206 |
| 120 | Ga0495601_0062778 | 3300053077 | Bacteria | 2360 |
| 121 | Ga0495612_0000414 | 3300053078 | Bacteria | 17054 |
| 122 | Ga0495612_0091741 | 3300053078 | Bacteria | 1287 |
| 123 | Ga0495595_0000157 | 3300053084 | Bacteria | 26977 |
| 124 | Ga0495619_0001401 | 3300053085 | Bacteria | 15847 |
| 125 | Ga0500566_0019563 | 3300053094 | Bacteria | 3975 |
| 126 | Ga0500614_000078 | 3300053123 | Bacteria | 21505 |
| 127 | Ga0501082_0362115 | 3300060353 | Bacteria | 1265 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300014326 | Ga0157380_10001547 | Ga0157380_100015472 | 228 |
| 2 | 3300046681 | Ga0495647_0000021 | Ga0495647_0000021_15309_16043 | 228 |
| 3 | 3300005441 | Ga0070700_100263430 | Ga0070700_1002634302 | 229 |
| 4 | 3300005458 | Ga0070681_10137628 | Ga0070681_101376281 | 229 |
| 5 | 3300005459 | Ga0068867_100000750 | Ga0068867_1000007502 | 229 |
| 6 | 3300005545 | Ga0070695_100381148 | Ga0070695_1003811481 | 229 |
| 7 | 3300006852 | Ga0075433_10000002 | Ga0075433_1000000221 | 229 |
| 8 | 3300009551 | Ga0105238_10000048 | Ga0105238_1000004842 | 229 |
| 9 | 3300026089 | Ga0207648_10001987 | Ga0207648_100019873 | 229 |
| 10 | 3300036401 | Ga0373937_0229193 | Ga0373937_0229193_971_1708 | 229 |
| 11 | 3300046473 | Ga0495582_0000009 | Ga0495582_0000009_122845_123582 | 229 |
| 12 | 3300046523 | Ga0495644_0000139 | Ga0495644_0000139_8551_9288 | 229 |
| 13 | 3300046537 | Ga0495598_0001157 | Ga0495598_0001157_1946_2692 | 229 |
| 14 | 3300046683 | Ga0495658_0000002 | Ga0495658_0000002_122840_123577 | 229 |
| 15 | 3300046684 | Ga0495669_0000051 | Ga0495669_0000051_22509_23273 | 229 |
| 16 | 3300047317 | Ga0495604_0000067 | Ga0495604_0000067_35447_36184 | 229 |
| 17 | 3300047469 | Ga0495673_0020260 | Ga0495673_0020260_1887_2624 | 229 |
| 18 | 3300048907 | Ga0496104_0000025 | Ga0496104_0000025_108561_109325 | 229 |
| 19 | 3300048908 | Ga0496105_0000023 | Ga0496105_0000023_108561_109325 | 229 |
| 20 | 3300049578 | Ga0501042_0015204 | Ga0501042_0015204_3648_4385 | 229 |
| 21 | 3300049591 | Ga0501075_0001056 | Ga0501075_0001056_11158_11904 | 229 |
| 22 | 3300050491 | nmdc:mga00v17_14421_c1 | nmdc:mga00v17_14421_c1_936_1673 | 229 |
| 23 | 3300050515 | nmdc:mga0a205_13_c1 | nmdc:mga0a205_13_c1_20443_21183 | 229 |
| 24 | 3300053085 | Ga0495619_0001401 | Ga0495619_0001401_4510_5247 | 229 |
| 25 | 3300060353 | Ga0501082_0362115 | Ga0501082_0362115_490_1227 | 229 |
| 26 | 3300005441 | Ga0070700_100096602 | Ga0070700_1000966022 | 230 |
| 27 | 3300005535 | Ga0070684_100038677 | Ga0070684_1000386774 | 230 |
| 28 | 3300053078 | Ga0495612_0091741 | Ga0495612_0091741_46_792 | 230 |
| 29 | 3300053084 | Ga0495595_0000157 | Ga0495595_0000157_727_1479 | 231 |
| 30 | 3300028563 | Ga0265319_1000014 | Ga0265319_1000014126 | 234 |
| 31 | 3300028800 | Ga0265338_10000244 | Ga0265338_100002442 | 234 |
| 32 | 3300031241 | Ga0265325_10014235 | Ga0265325_100142354 | 234 |
| 33 | 3300046459 | Ga0495629_0001644 | Ga0495629_0001644_6478_7281 | 236 |
| 34 | 3300053094 | Ga0500566_0019563 | Ga0500566_0019563_2018_2821 | 236 |
| 35 | 3300046536 | Ga0495587_0083359 | Ga0495587_0083359_930_1721 | 240 |
| 36 | 3300002239 | JGI24034J26672_10005572 | JGI24034J26672_100055722 | 241 |
| 37 | 3300005618 | Ga0068864_100000015 | Ga0068864_100000015113 | 241 |
| 38 | 3300026095 | Ga0207676_10000018 | Ga0207676_10000018187 | 241 |
| 39 | 3300046559 | Ga0495667_0000045 | Ga0495667_0000045_24950_25738 | 246 |
| 40 | 3300047321 | Ga0495676_0000956 | Ga0495676_0000956_17798_18586 | 246 |
| 41 | 3300047322 | Ga0495680_0000602 | Ga0495680_0000602_24937_25725 | 246 |
| 42 | 3300005333 | Ga0070677_10000044 | Ga0070677_1000004433 | 247 |
| 43 | 3300005364 | Ga0070673_100002354 | Ga0070673_1000023549 | 247 |
| 44 | 3300005439 | Ga0070711_100004900 | Ga0070711_1000049005 | 247 |
| 45 | 3300005457 | Ga0070662_100000002 | Ga0070662_100000002153 | 247 |
| 46 | 3300005547 | Ga0070693_100037307 | Ga0070693_1000373074 | 247 |
| 47 | 3300005548 | Ga0070665_100000141 | Ga0070665_10000014148 | 247 |
| 48 | 3300005563 | Ga0068855_100208267 | Ga0068855_1002082672 | 247 |
| 49 | 3300005578 | Ga0068854_100025915 | Ga0068854_1000259154 | 247 |
| 50 | 3300005614 | Ga0068856_100311765 | Ga0068856_1003117652 | 247 |
| 51 | 3300005616 | Ga0068852_100546979 | Ga0068852_1005469792 | 247 |
| 52 | 3300005617 | Ga0068859_100120350 | Ga0068859_1001203502 | 247 |
| 53 | 3300005841 | Ga0068863_100039572 | Ga0068863_1000395722 | 247 |
| 54 | 3300005842 | Ga0068858_100001913 | Ga0068858_10000191318 | 247 |
| 55 | 3300005842 | Ga0068858_100065135 | Ga0068858_1000651352 | 247 |
| 56 | 3300006051 | Ga0075364_10027210 | Ga0075364_100272102 | 247 |
| 57 | 3300006871 | Ga0075434_100467673 | Ga0075434_1004676732 | 247 |
| 58 | 3300006931 | Ga0097620_100120347 | Ga0097620_1001203472 | 247 |
| 59 | 3300009098 | Ga0105245_10000315 | Ga0105245_1000031529 | 247 |
| 60 | 3300009098 | Ga0105245_10001571 | Ga0105245_100015719 | 247 |
| 61 | 3300009553 | Ga0105249_10000076 | Ga0105249_10000076113 | 247 |
| 62 | 3300013308 | Ga0157375_10000171 | Ga0157375_1000017139 | 247 |
| 63 | 3300013308 | Ga0157375_10372831 | Ga0157375_103728312 | 247 |
| 64 | 3300025893 | Ga0207682_10000497 | Ga0207682_1000049715 | 247 |
| 65 | 3300025912 | Ga0207707_10113094 | Ga0207707_101130941 | 247 |
| 66 | 3300025916 | Ga0207663_10002979 | Ga0207663_100029795 | 247 |
| 67 | 3300025917 | Ga0207660_10061803 | Ga0207660_100618032 | 247 |
| 68 | 3300025921 | Ga0207652_10000211 | Ga0207652_1000021144 | 247 |
| 69 | 3300025924 | Ga0207694_10000056 | Ga0207694_1000005642 | 247 |
| 70 | 3300025927 | Ga0207687_10000112 | Ga0207687_1000011239 | 247 |
| 71 | 3300025927 | Ga0207687_10004413 | Ga0207687_100044133 | 247 |
| 72 | 3300025933 | Ga0207706_10000001 | Ga0207706_10000001335 | 247 |
| 73 | 3300025961 | Ga0207712_10000052 | Ga0207712_1000005218 | 247 |
| 74 | 3300025981 | Ga0207640_10019228 | Ga0207640_100192284 | 247 |
| 75 | 3300026035 | Ga0207703_10000061 | Ga0207703_1000006118 | 247 |
| 76 | 3300026035 | Ga0207703_10039826 | Ga0207703_100398262 | 247 |
| 77 | 3300026075 | Ga0207708_10087978 | Ga0207708_100879782 | 247 |
| 78 | 3300026078 | Ga0207702_10254034 | Ga0207702_102540342 | 247 |
| 79 | 3300026088 | Ga0207641_10063306 | Ga0207641_100633062 | 247 |
| 80 | 3300026118 | Ga0207675_100351428 | Ga0207675_1003514282 | 247 |
| 81 | 3300028379 | Ga0268266_10000056 | Ga0268266_1000005657 | 247 |
| 82 | 3300041512 | Ga0451853_1286712 | Ga0451853_1286712_1537_2328 | 247 |
| 83 | 3300046454 | Ga0495592_0000078 | Ga0495592_0000078_44112_44903 | 247 |
| 84 | 3300046458 | Ga0495591_024560 | Ga0495591_024560_460_1251 | 247 |
| 85 | 3300046461 | Ga0495641_0000005 | Ga0495641_0000005_60146_60937 | 247 |
| 86 | 3300046461 | Ga0495641_0047642 | Ga0495641_0047642_540_1331 | 247 |
| 87 | 3300046476 | Ga0495662_0000001 | Ga0495662_0000001_87689_88480 | 247 |
| 88 | 3300046514 | Ga0495618_0000014 | Ga0495618_0000014_31119_31910 | 247 |
| 89 | 3300046515 | Ga0495620_0000092 | Ga0495620_0000092_51092_51898 | 247 |
| 90 | 3300046516 | Ga0495628_0011425 | Ga0495628_0011425_5432_6223 | 247 |
| 91 | 3300046516 | Ga0495628_0116991 | Ga0495628_0116991_573_1364 | 247 |
| 92 | 3300046529 | Ga0495652_0004565 | Ga0495652_0004565_11050_11841 | 247 |
| 93 | 3300046533 | Ga0495640_0021936 | Ga0495640_0021936_2350_3141 | 247 |
| 94 | 3300046533 | Ga0495640_0159809 | Ga0495640_0159809_276_1073 | 247 |
| 95 | 3300046543 | Ga0495645_0034482 | Ga0495645_0034482_1476_2267 | 247 |
| 96 | 3300046642 | Ga0495634_0000045 | Ga0495634_0000045_78147_78938 | 247 |
| 97 | 3300046642 | Ga0495634_0033453 | Ga0495634_0033453_1266_2057 | 247 |
| 98 | 3300046663 | Ga0495635_0000031 | Ga0495635_0000031_31496_32287 | 247 |
| 99 | 3300046678 | Ga0495599_0004033 | Ga0495599_0004033_693_1484 | 247 |
| 100 | 3300046689 | Ga0495613_0000005 | Ga0495613_0000005_181582_182373 | 247 |
| 101 | 3300046694 | Ga0495649_0002413 | Ga0495649_0002413_3814_4605 | 247 |
| 102 | 3300047319 | Ga0495674_0000010 | Ga0495674_0000010_51918_52715 | 247 |
| 103 | 3300047322 | Ga0495680_0000114 | Ga0495680_0000114_15518_16309 | 247 |
| 104 | 3300047322 | Ga0495680_0000267 | Ga0495680_0000267_17483_18274 | 247 |
| 105 | 3300048903 | Ga0496100_0000061 | Ga0496100_0000061_16414_17232 | 247 |
| 106 | 3300048904 | Ga0496101_0000141 | Ga0496101_0000141_16414_17232 | 247 |
| 107 | 3300048905 | Ga0496102_0163070 | Ga0496102_0163070_813_1604 | 247 |
| 108 | 3300048909 | Ga0496106_0000094 | Ga0496106_0000094_16414_17232 | 247 |
| 109 | 3300048910 | Ga0496107_0000045 | Ga0496107_0000045_50200_51018 | 247 |
| 110 | 3300048911 | Ga0496108_0000164 | Ga0496108_0000164_16768_17586 | 247 |
| 111 | 3300048912 | Ga0496109_0000180 | Ga0496109_0000180_45084_45902 | 247 |
| 112 | 3300048917 | Ga0496114_0000171 | Ga0496114_0000171_21557_22384 | 247 |
| 113 | 3300048917 | Ga0496114_0008493 | Ga0496114_0008493_6566_7357 | 247 |
| 114 | 3300048918 | Ga0496115_0001687 | Ga0496115_0001687_8013_8840 | 247 |
| 115 | 3300048928 | Ga0496125_0148002 | Ga0496125_0148002_641_1459 | 247 |
| 116 | 3300053077 | Ga0495601_0000071 | Ga0495601_0000071_19194_19985 | 247 |
| 117 | 3300053077 | Ga0495601_0062778 | Ga0495601_0062778_427_1218 | 247 |
| 118 | 3300053078 | Ga0495612_0000414 | Ga0495612_0000414_3940_4731 | 247 |
| 119 | 3300053123 | Ga0500614_000078 | Ga0500614_000078_18264_19055 | 247 |
| 120 | 3300001977 | JGI24746J21847_1000152 | JGI24746J21847_10001527 | 248 |
| 121 | 3300005329 | Ga0070683_100223815 | Ga0070683_1002238152 | 248 |
| 122 | 3300006847 | Ga0075431_100221562 | Ga0075431_1002215622 | 248 |
| 123 | 3300025944 | Ga0207661_10183097 | Ga0207661_101830972 | 248 |
| 124 | 3300046615 | Ga0495656_0000931 | Ga0495656_0000931_7748_8545 | 248 |
| 125 | 3300048909 | Ga0496106_0000030 | Ga0496106_0000030_82617_83420 | 248 |
| 126 | 3300048914 | Ga0496111_0281172 | Ga0496111_0281172_193_1005 | 248 |
| 127 | 3300048918 | Ga0496115_0000011 | Ga0496115_0000011_179314_180117 | 248 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7cok-assembly1.cif.gz_B | crystal structure of ligand-free form of 5-ketofructose reductase of gluconobacter sp. strain chm43 | 0.8704 | 3 | 247 |
| 2hk8-assembly2.cif.gz_B | crystal structure of shikimate dehydrogenase from aquifex aeolicus at 2.35 angstrom resolution | 0.8687 | 1 | 245 |
| 2cy0-assembly1.cif.gz_B | crystal structure of shikimate 5-dehydrogenase (aroe) from thermus thermophilus hb8 in complex with nadp | 0.8604 | 1 | 245 |
| 7cok-assembly1.cif.gz_B | crystal structure of ligand-free form of 5-ketofructose reductase of gluconobacter sp. strain chm43 | 0.8573 | 3 | 247 |
| 2hk8-assembly2.cif.gz_B | crystal structure of shikimate dehydrogenase from aquifex aeolicus at 2.35 angstrom resolution | 0.8558 | 1 | 245 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A1D6LFB7_44_430_3.50.50.60 | Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain | 0.9617 | 100 | 130 | 3.50.50.60 |
| af_A0A1D6PS54_2_340_3.50.50.60 | Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain | 0.9609 | 100 | 130 | 3.50.50.60 |
| 2hk7A02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.8977 | 88 | 215 | 3.40.50.720 |
| 2hk7A02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.8781 | 88 | 215 | 3.40.50.720 |
| 2d5cB02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.8563 | 89 | 222 | 3.40.50.720 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7V9LHE0-F1-model_v4 | Shikimate dehydrogenase | 0.9379 | 20 | 247 |
GO:0004764
GO:0005829 GO:0009423 GO:0019632 GO:0050661 |
| AF-A0A537YS96-F1-model_v4 | Shikimate dehydrogenase (NADP(+)) (SDH) (EC 1.1.1.25) | 0.9364 | 1 | 248 |
GO:0004764
GO:0005829 GO:0008652 GO:0009073 GO:0009423 GO:0019632 GO:0050661 |
| AF-A0A7V9CC03-F1-model_v4 | Shikimate dehydrogenase | 0.9347 | 92 | 248 |
GO:0004764
GO:0005829 GO:0009423 GO:0019632 GO:0050661 |
| AF-A0A537YS96-F1-model_v4 | Shikimate dehydrogenase (NADP(+)) (SDH) (EC 1.1.1.25) | 0.9328 | 1 | 248 |
GO:0004764
GO:0005829 GO:0008652 GO:0009073 GO:0009423 GO:0019632 GO:0050661 |
| AF-A0A3M1VHR5-F1-model_v4 | Multifunctional fusion protein [Includes: Shikimate kinase (SK) (EC 2.7.1.71); Shikimate dehydrogenase (NADP(+)) (SDH) (EC 1.1.1.25)] | 0.8964 | 1 | 245 |
GO:0000287
GO:0004764 GO:0004765 GO:0005524 GO:0005737 GO:0008652 GO:0009073 GO:0009423 GO:0019632 GO:0050661 |
Predicted Structure (AlphaFold2)
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