F121570

General Info

Members Datasets Scaffolds Average Seq Length
124 98 124 411

Family's Representative Sequence

Representative Sequence 3300005455|Ga0070663_100114135|Ga0070663_1001141353
Length 383
Sequence MARILLGVSGGIAAYKSLELARLATVAGHGVRVVMTEAAGRFVGAASFEGIVGAPVLTSEFERDPLGGVFPGDPAPEHDPIGHLELVANCDAYLIAPASANTVAKLAAGMADSMLTTSFLACTAPRLLAPAMNNRMYADAATQANLAALRERGVEVIEPGEGRLASRGEFGRGRLPDPAELLARVEAVLPTGERPWDGMRVLVTAGGTREPIDPVRFLGNRSSGRMGIALAAAAARRGADVTLIAANVSLPEPAGVRRVDVETAAELAGAASTDKLKREGNLNLHLEPTEDILAGLTATRTDEQTIVGFAAEHGNDVGRAREKLQRKGADLIVLNDVSDPTIGFESSDNAVTLILPLAPKDEIAEQILQRVDQLRSASNLHTK

Samples

Sample ID Description Type Environment
1 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
2 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
3 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
4 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
7 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
8 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
14 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
15 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
16 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
17 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
18 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
19 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
21 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
22 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
23 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
24 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
25 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
26 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
27 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
28 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
51 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
52 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
53 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
54 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
55 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
56 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
57 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
58 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
59 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
60 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
61 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
62 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
63 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
64 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
65 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
66 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
67 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
68 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
69 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
70 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
71 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
72 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
73 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
74 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
75 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
76 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
77 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
78 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
79 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
80 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
81 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
82 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
83 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
84 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
85 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
86 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
87 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
88 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
90 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
91 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
92 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
93 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
94 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
95 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
96 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
97 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
98 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.81
Nodule 0
Rhizoplane 15.32
Rhizosphere 83.06
Stem 0
Stem Tuber 0
Unclassified 0.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070680_100026098 3300005336 Bacteria 4673
2 Ga0070682_100000090 3300005337 Bacteria 82642
3 Ga0070668_100044978 3300005347 Bacteria 3387
4 Ga0070659_100002550 3300005366 Bacteria 12957
5 Ga0070713_100000010 3300005436 Bacteria 151790
6 Ga0070663_100114135 3300005455 Bacteria 2034
7 Ga0070681_10006525 3300005458 Bacteria 11355
8 Ga0068867_100004467 3300005459 Bacteria 9833
9 Ga0070679_100002156 3300005530 Bacteria 17754
10 Ga0070684_100082008 3300005535 Bacteria 2855
11 Ga0070686_100034426 3300005544 Bacteria 3122
12 Ga0070665_100000135 3300005548 Bacteria 138925
13 Ga0068852_100007990 3300005616 Bacteria 7758
14 Ga0068864_100000015 3300005618 Bacteria 303368
15 Ga0068858_100000075 3300005842 Bacteria 104349
16 Ga0068858_100003213 3300005842 Bacteria 16316
17 Ga0075433_10059784 3300006852 Bacteria 3335
18 Ga0105245_10000278 3300009098 Bacteria 48473
19 Ga0105245_10000415 3300009098 Bacteria 39764
20 Ga0105245_10017082 3300009098 Bacteria 6332
21 Ga0105247_10002574 3300009101 Bacteria 12294
22 Ga0114129_10125692 3300009147 Bacteria 3526
23 Ga0114129_10153196 3300009147 Bacteria 3154
24 Ga0105242_10000603 3300009176 Bacteria 28175
25 Ga0157370_10063695 3300013104 Bacteria 3492
26 Ga0157369_10000074 3300013105 Bacteria 136668
27 Ga0157374_10013823 3300013296 Bacteria 7052
28 Ga0157372_10000053 3300013307 Bacteria 128824
29 Ga0157375_10082225 3300013308 Bacteria 3262
30 Ga0157379_10058958 3300014968 Bacteria 3433
31 Ga0163161_10000053 3300017792 Bacteria 117408
32 Ga0163161_10015977 3300017792 Bacteria 5238
33 Ga0207656_10000705 3300025321 Bacteria 10939
34 Ga0207710_10000157 3300025900 Bacteria 72764
35 Ga0207707_10063101 3300025912 Bacteria 3225
36 Ga0207660_10027474 3300025917 Bacteria 3884
37 Ga0207652_10003413 3300025921 Bacteria 13113
38 Ga0207694_10000063 3300025924 Bacteria 139700
39 Ga0207687_10000036 3300025927 Bacteria 121934
40 Ga0207687_10000460 3300025927 Bacteria 27723
41 Ga0207687_10006467 3300025927 Bacteria 7737
42 Ga0207700_10000007 3300025928 Bacteria 345720
43 Ga0207690_10007254 3300025932 Bacteria 6583
44 Ga0207690_10084420 3300025932 Bacteria 2226
45 Ga0207686_10000097 3300025934 Bacteria 72219
46 Ga0207661_10003162 3300025944 Bacteria 11421
47 Ga0207651_10000448 3300025960 Bacteria 17432
48 Ga0207668_10010903 3300025972 Bacteria 5509
49 Ga0207640_10010860 3300025981 Bacteria 5139
50 Ga0207703_10000088 3300026035 Bacteria 106080
51 Ga0207703_10000287 3300026035 Bacteria 55757
52 Ga0207678_10083977 3300026067 Bacteria 2724
53 Ga0207641_10000016 3300026088 Bacteria 307363
54 Ga0207648_10004310 3300026089 Bacteria 14650
55 Ga0207676_10000018 3300026095 Bacteria 306375
56 Ga0207698_10000004 3300026142 Bacteria 313614
57 Ga0268266_10000056 3300028379 Bacteria 289176
58 Ga0268264_10009379 3300028381 Bacteria 8102
59 Ga0451853_0170599 3300041512 Bacteria 5750
60 Ga0495603_0000098 3300046455 Bacteria 40307
61 Ga0495603_0001799 3300046455 Bacteria 12650
62 Ga0495629_0008850 3300046459 Bacteria 7402
63 Ga0495641_0000005 3300046461 Bacteria 206626
64 Ga0495653_0152945 3300046463 Bacteria 1610
65 Ga0495582_0000001 3300046473 Bacteria 252434
66 Ga0495594_0000030 3300046499 Bacteria 66443
67 Ga0495608_0023190 3300046511 Bacteria 4255
68 Ga0495620_0000139 3300046515 Bacteria 59244
69 Ga0495628_0000679 3300046516 Bacteria 31290
70 Ga0495628_0009870 3300046516 Bacteria 8130
71 Ga0495628_0045534 3300046516 Bacteria 3488
72 Ga0495630_0050672 3300046517 Bacteria 3107
73 Ga0495652_0000037 3300046529 Bacteria 133232
74 Ga0495640_0081449 3300046533 Bacteria 2151
75 Ga0495640_0086166 3300046533 Bacteria 2080
76 Ga0495622_0000080 3300046557 Bacteria 85557
77 Ga0495667_0000020 3300046559 Bacteria 180876
78 Ga0495667_0165500 3300046559 Bacteria 1421
79 Ga0495634_0000028 3300046642 Bacteria 114075
80 Ga0495635_0000076 3300046663 Bacteria 61665
81 Ga0495635_0133559 3300046663 Bacteria 1692
82 Ga0495657_0017491 3300046675 Bacteria 5202
83 Ga0495658_0000002 3300046683 Bacteria 309651
84 Ga0495624_0056227 3300046690 Bacteria 2476
85 Ga0495649_0004420 3300046694 Bacteria 9189
86 Ga0495674_0000030 3300047319 Bacteria 115975
87 Ga0495676_0000621 3300047321 Bacteria 29385
88 Ga0495680_0001430 3300047322 Bacteria 25733
89 Ga0495680_0001593 3300047322 Bacteria 24235
90 Ga0495680_0018470 3300047322 Bacteria 5918
91 Ga0495679_001955 3300047446 Bacteria 11003
92 Ga0495602_0029920 3300048088 Bacteria 5175
93 Ga0495614_0071362 3300048089 Bacteria 1497
94 Ga0496104_0000015 3300048907 Bacteria 374530
95 Ga0496104_0003161 3300048907 Bacteria 14181
96 Ga0496105_0000004 3300048908 Bacteria 475798
97 Ga0496105_0000387 3300048908 Bacteria 28884
98 Ga0496106_0000959 3300048909 Bacteria 21012
99 Ga0496107_0070228 3300048910 Bacteria 2542
100 Ga0496108_0000063 3300048911 Bacteria 118950
101 Ga0496108_0000550 3300048911 Bacteria 29326
102 Ga0496108_0007109 3300048911 Bacteria 9067
103 Ga0496108_0056756 3300048911 Bacteria 3290
104 Ga0496109_0000012 3300048912 Bacteria 229699
105 Ga0496109_0000174 3300048912 Bacteria 63794
106 Ga0496109_0000348 3300048912 Bacteria 43133
107 Ga0496110_0010984 3300048913 Bacteria 7387
108 Ga0496112_0002961 3300048915 Bacteria 13853
109 Ga0496113_0000013 3300048916 Bacteria 81224
110 Ga0496113_0069165 3300048916 Bacteria 2681
111 Ga0496114_0069083 3300048917 Bacteria 2966
112 Ga0496115_0000011 3300048918 Bacteria 222529
113 Ga0501040_0030009 3300049576 Bacteria 3671
114 Ga0501072_0174350 3300049588 Bacteria 1716
115 Ga0501075_0206020 3300049591 Bacteria 1500
116 Ga0501081_0083832 3300049743 Bacteria 2235
117 nmdc:mga05p37_155784_c1 3300050507 Bacteria 2792
118 nmdc:mga0a205_43_c2 3300050515 Bacteria 18020
119 Ga0495601_0000060 3300053077 Bacteria 60600
120 Ga0495601_0082980 3300053077 Bacteria 2058
121 Ga0495595_0000045 3300053084 Bacteria 63054
122 Ga0495619_0000008 3300053085 Bacteria 305999
123 Ga0500614_001646 3300053123 Bacteria 5249
124 Ga0530510_0017150 3300061734 Bacteria 5130

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025960 Ga0207651_10000448 Ga0207651_100004489 353
2 3300046517 Ga0495630_0050672 Ga0495630_0050672_48_1127 359
3 3300005436 Ga0070713_100000010 Ga0070713_10000001049 361
4 3300025928 Ga0207700_10000007 Ga0207700_10000007250 361
5 3300048911 Ga0496108_0007109 Ga0496108_0007109_3284_4531 361
6 3300048912 Ga0496109_0000348 Ga0496109_0000348_4108_5355 361
7 3300005366 Ga0070659_100002550 Ga0070659_1000025507 363
8 3300025932 Ga0207690_10007254 Ga0207690_100072543 363
9 3300046663 Ga0495635_0133559 Ga0495635_0133559_36_1178 380
10 3300005455 Ga0070663_100114135 Ga0070663_1001141353 383
11 3300046529 Ga0495652_0000037 Ga0495652_0000037_38225_39472 388
12 3300009176 Ga0105242_10000603 Ga0105242_1000060321 394
13 3300025934 Ga0207686_10000097 Ga0207686_1000009735 394
14 3300048088 Ga0495602_0029920 Ga0495602_0029920_1544_2791 400
15 3300005347 Ga0070668_100044978 Ga0070668_1000449783 406
16 3300025972 Ga0207668_10010903 Ga0207668_100109033 406
17 3300026067 Ga0207678_10083977 Ga0207678_100839773 407
18 3300046516 Ga0495628_0000679 Ga0495628_0000679_11650_12897 407
19 3300006852 Ga0075433_10059784 Ga0075433_100597843 412
20 3300050515 nmdc:mga0a205_43_c2 nmdc:mga0a205_43_c2_10653_11891 412
21 3300009147 Ga0114129_10125692 Ga0114129_101256924 413
22 3300009147 Ga0114129_10153196 Ga0114129_101531964 413
23 3300025981 Ga0207640_10010860 Ga0207640_100108603 413
24 3300046455 Ga0495603_0000098 Ga0495603_0000098_35184_36428 413
25 3300046559 Ga0495667_0000020 Ga0495667_0000020_84808_86049 413
26 3300047322 Ga0495680_0018470 Ga0495680_0018470_2179_3420 413
27 3300048907 Ga0496104_0000015 Ga0496104_0000015_276047_277291 413
28 3300048908 Ga0496105_0000004 Ga0496105_0000004_198508_199752 413
29 3300049576 Ga0501040_0030009 Ga0501040_0030009_686_1936 413
30 3300049591 Ga0501075_0206020 Ga0501075_0206020_67_1317 413
31 3300050507 nmdc:mga05p37_155784_c1 nmdc:mga05p37_155784_c1_1248_2498 413
32 3300061734 Ga0530510_0017150 Ga0530510_0017150_2245_3495 413
33 3300005336 Ga0070680_100026098 Ga0070680_1000260983 414
34 3300005337 Ga0070682_100000090 Ga0070682_10000009022 414
35 3300005458 Ga0070681_10006525 Ga0070681_100065258 414
36 3300005459 Ga0068867_100004467 Ga0068867_1000044674 414
37 3300005530 Ga0070679_100002156 Ga0070679_1000021566 414
38 3300005535 Ga0070684_100082008 Ga0070684_1000820083 414
39 3300005544 Ga0070686_100034426 Ga0070686_1000344263 414
40 3300005548 Ga0070665_100000135 Ga0070665_10000013542 414
41 3300005616 Ga0068852_100007990 Ga0068852_1000079903 414
42 3300005618 Ga0068864_100000015 Ga0068864_100000015217 414
43 3300005842 Ga0068858_100000075 Ga0068858_10000007520 414
44 3300005842 Ga0068858_100003213 Ga0068858_1000032137 414
45 3300009098 Ga0105245_10000278 Ga0105245_1000027830 414
46 3300009098 Ga0105245_10000415 Ga0105245_1000041527 414
47 3300009098 Ga0105245_10017082 Ga0105245_100170827 414
48 3300009101 Ga0105247_10002574 Ga0105247_100025749 414
49 3300013104 Ga0157370_10063695 Ga0157370_100636953 414
50 3300013105 Ga0157369_10000074 Ga0157369_1000007451 414
51 3300013296 Ga0157374_10013823 Ga0157374_100138233 414
52 3300013307 Ga0157372_10000053 Ga0157372_100000534 414
53 3300013308 Ga0157375_10082225 Ga0157375_100822253 414
54 3300014968 Ga0157379_10058958 Ga0157379_100589585 414
55 3300017792 Ga0163161_10000053 Ga0163161_10000053102 414
56 3300017792 Ga0163161_10015977 Ga0163161_100159773 414
57 3300025321 Ga0207656_10000705 Ga0207656_100007059 414
58 3300025900 Ga0207710_10000157 Ga0207710_1000015747 414
59 3300025912 Ga0207707_10063101 Ga0207707_100631013 414
60 3300025917 Ga0207660_10027474 Ga0207660_100274743 414
61 3300025921 Ga0207652_10003413 Ga0207652_1000341311 414
62 3300025924 Ga0207694_10000063 Ga0207694_10000063100 414
63 3300025927 Ga0207687_10000036 Ga0207687_10000036101 414
64 3300025927 Ga0207687_10000460 Ga0207687_1000046024 414
65 3300025927 Ga0207687_10006467 Ga0207687_100064673 414
66 3300025932 Ga0207690_10084420 Ga0207690_100844203 414
67 3300025944 Ga0207661_10003162 Ga0207661_100031626 414
68 3300026035 Ga0207703_10000088 Ga0207703_1000008820 414
69 3300026035 Ga0207703_10000287 Ga0207703_1000028736 414
70 3300026088 Ga0207641_10000016 Ga0207641_10000016208 414
71 3300026089 Ga0207648_10004310 Ga0207648_100043106 414
72 3300026095 Ga0207676_10000018 Ga0207676_1000001883 414
73 3300026142 Ga0207698_10000004 Ga0207698_1000000415 414
74 3300028379 Ga0268266_10000056 Ga0268266_10000056191 414
75 3300028381 Ga0268264_10009379 Ga0268264_100093793 414
76 3300041512 Ga0451853_0170599 Ga0451853_0170599_3639_4883 414
77 3300046455 Ga0495603_0001799 Ga0495603_0001799_36_1280 414
78 3300046459 Ga0495629_0008850 Ga0495629_0008850_841_2088 414
79 3300046461 Ga0495641_0000005 Ga0495641_0000005_200801_202066 414
80 3300046463 Ga0495653_0152945 Ga0495653_0152945_343_1587 414
81 3300046473 Ga0495582_0000001 Ga0495582_0000001_92715_93959 414
82 3300046499 Ga0495594_0000030 Ga0495594_0000030_10343_11593 414
83 3300046511 Ga0495608_0023190 Ga0495608_0023190_1788_3032 414
84 3300046515 Ga0495620_0000139 Ga0495620_0000139_43036_44280 414
85 3300046516 Ga0495628_0009870 Ga0495628_0009870_1147_2421 414
86 3300046516 Ga0495628_0045534 Ga0495628_0045534_2011_3255 414
87 3300046533 Ga0495640_0081449 Ga0495640_0081449_799_2046 414
88 3300046533 Ga0495640_0086166 Ga0495640_0086166_175_1422 414
89 3300046557 Ga0495622_0000080 Ga0495622_0000080_61896_63146 414
90 3300046559 Ga0495667_0165500 Ga0495667_0165500_121_1365 414
91 3300046642 Ga0495634_0000028 Ga0495634_0000028_25536_26780 414
92 3300046663 Ga0495635_0000076 Ga0495635_0000076_22208_23452 414
93 3300046675 Ga0495657_0017491 Ga0495657_0017491_1659_2903 414
94 3300046683 Ga0495658_0000002 Ga0495658_0000002_216321_217565 414
95 3300046690 Ga0495624_0056227 Ga0495624_0056227_1179_2453 414
96 3300046694 Ga0495649_0004420 Ga0495649_0004420_6467_7711 414
97 3300047319 Ga0495674_0000030 Ga0495674_0000030_29426_30673 414
98 3300047321 Ga0495676_0000621 Ga0495676_0000621_3447_4691 414
99 3300047322 Ga0495680_0001430 Ga0495680_0001430_23367_24611 414
100 3300047322 Ga0495680_0001593 Ga0495680_0001593_15570_16814 414
101 3300047446 Ga0495679_001955 Ga0495679_001955_7520_8764 414
102 3300048089 Ga0495614_0071362 Ga0495614_0071362_227_1471 414
103 3300048907 Ga0496104_0003161 Ga0496104_0003161_3522_4790 414
104 3300048908 Ga0496105_0000387 Ga0496105_0000387_26547_27815 414
105 3300048909 Ga0496106_0000959 Ga0496106_0000959_11420_12664 414
106 3300048910 Ga0496107_0070228 Ga0496107_0070228_929_2173 414
107 3300048911 Ga0496108_0000063 Ga0496108_0000063_107236_108492 414
108 3300048911 Ga0496108_0000550 Ga0496108_0000550_11402_12646 414
109 3300048911 Ga0496108_0056756 Ga0496108_0056756_163_1413 414
110 3300048912 Ga0496109_0000012 Ga0496109_0000012_4255_5511 414
111 3300048912 Ga0496109_0000174 Ga0496109_0000174_49972_51216 414
112 3300048913 Ga0496110_0010984 Ga0496110_0010984_172_1416 414
113 3300048915 Ga0496112_0002961 Ga0496112_0002961_12174_13430 414
114 3300048916 Ga0496113_0000013 Ga0496113_0000013_45747_47003 414
115 3300048916 Ga0496113_0069165 Ga0496113_0069165_1027_2277 414
116 3300048917 Ga0496114_0069083 Ga0496114_0069083_314_1558 414
117 3300048918 Ga0496115_0000011 Ga0496115_0000011_87714_88970 414
118 3300049588 Ga0501072_0174350 Ga0501072_0174350_135_1391 414
119 3300049743 Ga0501081_0083832 Ga0501081_0083832_959_2206 414
120 3300053077 Ga0495601_0000060 Ga0495601_0000060_49328_50572 414
121 3300053077 Ga0495601_0082980 Ga0495601_0082980_74_1321 414
122 3300053084 Ga0495595_0000045 Ga0495595_0000045_5200_6444 414
123 3300053085 Ga0495619_0000008 Ga0495619_0000008_208819_210141 414
124 3300053123 Ga0500614_001646 Ga0500614_001646_1251_2516 414

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04127

DFP

DNA / pantothenate metabolism flavoprotein

196

274

0.96

PF04127

DFP

DNA / pantothenate metabolism flavoprotein

268

354

0.93

PF02441

Flavoprotein

Flavoprotein

2

189

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
5h75-assembly1.cif.gz_C crystal structure of the mrsd-protein a fusion protein 0.9182 2 186
5h75-assembly1.cif.gz_D crystal structure of the mrsd-protein a fusion protein 0.9027 2 186
5h75-assembly1.cif.gz_A crystal structure of the mrsd-protein a fusion protein 0.8968 3 186
1g63-assembly1.cif.gz_D peptidyl-cysteine decarboxylase epid 0.8895 3 186
6jls-assembly1.cif.gz_A crystal structure of fmn-dependent cysteine decarboxylases tvaf from thioviridamide biosynthesis 0.8843 1 159
ID Description Score Start End Superfamily
af_Q2G268_1_185_3.40.50.1950 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavin prenyltransferase-like 0.9693 1 187 3.40.50.1950
af_P9WNZ1_7_185_3.40.50.1950 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavin prenyltransferase-like 0.9586 2 191 3.40.50.1950
af_P0ABQ0_1_184_3.40.50.1950 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavin prenyltransferase-like 0.9407 2 192 3.40.50.1950
af_P9WNZ1_7_185_3.40.50.1950 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavin prenyltransferase-like 0.9326 2 191 3.40.50.1950
af_P0ABQ0_1_184_3.40.50.1950 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavin prenyltransferase-like 0.9107 2 192 3.40.50.1950
ID Description Score Start End GO Terms
AF-A0A2V7RW69-F1-model_v4 Flavoprotein domain-containing protein 0.9893 2 62 GO:0003824
AF-A0A4Q3IR24-F1-model_v4 deleted 0.9797 2 62
AF-M6RAL0-F1-model_v4 Flavoprotein 0.9789 3 144 GO:0004633
GO:0010181
GO:0015937
GO:0071513
AF-A0A1I3E2L4-F1-model_v4 Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 0.9707 2 189 GO:0004633
GO:0010181
GO:0015937
GO:0016874
GO:0071513
AF-A0A7X3HEJ5-F1-model_v4 Phosphopantothenoylcysteine decarboxylase 0.9689 83 189 GO:0004633
GO:0010181
GO:0015937
GO:0071513

Feature Viewer

pLDDT pTM Quality
79.44 0.59 Medium
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Predicted Structure (AlphaFold2)

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