F115768

General Info

Members Datasets Scaffolds Average Seq Length
122 86 122 452

Family's Representative Sequence

Representative Sequence 3300047471|Ga0495684_0015713|Ga0495684_0015713_3398_4930
Length 510
Sequence VAHVSGAVETTVTELPDSRVRVQVQVAPAEVQGRLEHKARQLGRELKLPGFRRGKVPAPLVIQRVGREAVLDQAIRDSLSGWYAEAIDTAGVVPVGDPQLDLADLPQEGEALRFSIEIGVLPTAELGEYDGLEVPRREAAVDEQLVDREIDAMRERLARLQTAERAAAEGDFVVIDYVGSLPAAADEEAAAGEDAQQSGAREPVGAPRAEASVGEGRDQLIELGGGNLIPGFEEALLGASAGERRAVELTFPGDYPNEELAGRDARFDVTVKEVKRKQLPDVGEDLAIDAGFDSVQELREDIRARLLEAEESRIEGEFREAALDAAVERASVSLTPELIQARAREMWERMLHSLSHRGISREAYLQIAGREESEILAETESDAARALRREAVLTAIVAAEEISPTEEQLLEAVTPTAERDGVEPAKMLAEVRASGRLEELREDLAARIAIELIADRAKPISVAQAEAREQLWTPAGEGAAKAGALGGATXGDGAPAPGKLWTPTDRAAGS

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
8 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
9 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
10 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
11 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
12 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
13 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
14 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
15 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
16 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
18 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
19 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
20 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
22 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
23 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
24 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
25 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
26 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
37 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
38 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
39 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
40 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
41 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
42 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
43 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
44 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
45 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
46 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
47 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
48 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
49 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
50 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
51 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
52 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
53 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
54 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
55 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
56 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
57 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
58 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
59 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
60 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
61 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
62 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
63 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
64 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
65 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
66 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
67 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
68 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
74 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
75 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
77 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
78 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
79 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
81 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
82 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
83 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
84 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
85 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
86 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.82
Nodule 0
Rhizoplane 8.2
Rhizosphere 90.98
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10013159 3300003203 Bacteria 3565
2 JGI25407J50210_10005748 3300003373 Bacteria 3060
3 Ga0070683_100207298 3300005329 Bacteria 1862
4 Ga0070682_100020772 3300005337 Bacteria 3868
5 Ga0068868_100009321 3300005338 Bacteria 7057
6 Ga0070691_10059397 3300005341 Bacteria 1838
7 Ga0070700_100040576 3300005441 Bacteria 2850
8 Ga0070684_100266484 3300005535 Bacteria 1568
9 Ga0070672_100152290 3300005543 Bacteria 1913
10 Ga0070704_100091535 3300005549 Bacteria 2268
11 Ga0068856_100095808 3300005614 Bacteria 2956
12 Ga0070702_100041592 3300005615 Bacteria 2579
13 Ga0068852_100014595 3300005616 Bacteria 6055
14 Ga0068861_100063641 3300005719 Bacteria 2836
15 Ga0081538_10000436 3300005981 Bacteria 47027
16 Ga0081538_10007550 3300005981 Bacteria 9391
17 Ga0081538_10010221 3300005981 Bacteria 7711
18 Ga0081538_10023336 3300005981 Bacteria 4450
19 Ga0081538_10042539 3300005981 Bacteria 2865
20 Ga0081539_10005888 3300005985 Bacteria 12135
21 Ga0070712_100000001 3300006175 Bacteria 343916
22 Ga0075428_100080833 3300006844 Bacteria 3547
23 Ga0105240_10012367 3300009093 Bacteria 11786
24 Ga0111539_10034504 3300009094 Bacteria 6134
25 Ga0111539_10089565 3300009094 Bacteria 3616
26 Ga0111539_10097477 3300009094 Bacteria 3454
27 Ga0105245_10022220 3300009098 Bacteria 5568
28 Ga0105245_10139183 3300009098 Bacteria 2284
29 Ga0105243_10115730 3300009148 Bacteria 2252
30 Ga0105243_10260581 3300009148 Bacteria 1552
31 Ga0105237_10002976 3300009545 Bacteria 20479
32 Ga0105238_10106850 3300009551 Bacteria 2780
33 Ga0207426_1017551 3300025302 Bacteria 2541
34 Ga0207688_10011978 3300025901 Bacteria 4719
35 Ga0207695_10086172 3300025913 Bacteria 3169
36 Ga0207671_10009788 3300025914 Bacteria 7976
37 Ga0207706_10099986 3300025933 Bacteria 2552
38 Ga0207661_10121235 3300025944 Bacteria 2227
39 Ga0207678_10173657 3300026067 Bacteria 1840
40 Ga0207678_10184775 3300026067 Bacteria 1780
41 Ga0207708_10005927 3300026075 Bacteria 9040
42 Ga0207708_10022707 3300026075 Bacteria 4738
43 Ga0207675_100055667 3300026118 Bacteria 3690
44 Ga0207675_100078739 3300026118 Bacteria 3089
45 Ga0207675_100097059 3300026118 Bacteria 2775
46 Ga0207675_100229328 3300026118 Bacteria 1791
47 Ga0207683_10097185 3300026121 Bacteria 2626
48 Ga0207683_10101306 3300026121 Bacteria 2571
49 Ga0207698_10033082 3300026142 Bacteria 3753
50 Ga0207428_10042919 3300027907 Bacteria 3656
51 Ga0265338_10021263 3300028800 Bacteria 6774
52 Ga0265327_10006517 3300031251 Bacteria 9295
53 Ga0265327_10016983 3300031251 Bacteria 4590
54 Ga0265327_10067744 3300031251 Bacteria 1797
55 Ga0307405_10052369 3300031731 Bacteria 2537
56 Ga0307413_10080012 3300031824 Bacteria 2091
57 Ga0307406_10057660 3300031901 Bacteria 2492
58 Ga0307407_10001981 3300031903 Bacteria 7789
59 Ga0307407_10056336 3300031903 Bacteria 2275
60 Ga0307409_100009269 3300031995 Bacteria 6038
61 Ga0307409_100062661 3300031995 Bacteria 2912
62 Ga0307416_100020559 3300032002 Bacteria 4714
63 Ga0466963_0024177 3300044694 Bacteria 3867
64 Ga0466963_0040376 3300044694 Bacteria 3058
65 Ga0466971_0018108 3300044719 Bacteria 3120
66 Ga0466971_0059987 3300044719 Bacteria 1719
67 Ga0466960_0077179 3300044901 Bacteria 1670
68 Ga0466958_0005821 3300045836 Bacteria 6668
69 Ga0466967_0005853 3300045976 Bacteria 8603
70 Ga0466967_0020665 3300045976 Bacteria 5328
71 Ga0466967_0027905 3300045976 Bacteria 4704
72 Ga0466967_0036683 3300045976 Bacteria 4188
73 Ga0466967_0066038 3300045976 Bacteria 3222
74 Ga0466967_0087188 3300045976 Bacteria 2829
75 Ga0495653_0003166 3300046463 Bacteria 13179
76 Ga0495664_0000063 3300046477 Bacteria 51031
77 Ga0495618_0000113 3300046514 Bacteria 59243
78 Ga0495630_0002179 3300046517 Bacteria 13645
79 Ga0495630_0109812 3300046517 Bacteria 2089
80 Ga0495645_0000051 3300046543 Bacteria 87212
81 Ga0495645_0000063 3300046543 Bacteria 74741
82 Ga0495634_0055704 3300046642 Bacteria 2644
83 Ga0495657_0000013 3300046675 Bacteria 195590
84 Ga0495600_0039812 3300046809 Bacteria 3061
85 Ga0495604_0000828 3300047317 Bacteria 25826
86 Ga0495684_0015713 3300047471 Bacteria 5825
87 Ga0495684_0064041 3300047471 Bacteria 2794
88 Ga0496100_0001802 3300048903 Bacteria 10693
89 Ga0496102_0000002 3300048905 Bacteria 814588
90 Ga0496103_0000066 3300048906 Bacteria 126247
91 Ga0496104_0000028 3300048907 Bacteria 203377
92 Ga0496110_0021574 3300048913 Bacteria 5456
93 Ga0496111_0000896 3300048914 Bacteria 16219
94 Ga0496112_0000126 3300048915 Bacteria 47554
95 Ga0496112_0011985 3300048915 Bacteria 7948
96 Ga0496115_0000067 3300048918 Bacteria 94753
97 Ga0496115_0000448 3300048918 Bacteria 33140
98 Ga0501031_0048309 3300049568 Bacteria 2774
99 Ga0501032_0159151 3300049569 Bacteria 1483
100 Ga0501033_0129876 3300049570 Bacteria 1826
101 Ga0501039_0022987 3300049575 Bacteria 4782
102 Ga0501039_0029286 3300049575 Bacteria 4240
103 Ga0501040_0060698 3300049576 Bacteria 2599
104 Ga0501041_0089575 3300049577 Bacteria 1899
105 Ga0501042_0135806 3300049578 Bacteria 1773
106 Ga0501048_0064900 3300049582 Bacteria 2582
107 Ga0501071_0090533 3300049587 Bacteria 2246
108 Ga0501075_0049037 3300049591 Bacteria 3174
109 Ga0501075_0110836 3300049591 Bacteria 2086
110 Ga0501079_0073465 3300049741 Bacteria 2643
111 Ga0501044_0195545 3300049823 Bacteria 1983
112 Ga0501045_0055034 3300049824 Bacteria 2910
113 nmdc:mga08y16_84615_c1 3300050511 Bacteria 3306
114 nmdc:mga08y16_96020_c1 3300050511 Bacteria 3087
115 Ga0495601_0000852 3300053077 Bacteria 16593
116 Ga0495601_0104706 3300053077 Bacteria 1829
117 Ga0495612_0000072 3300053078 Bacteria 45740
118 Ga0495655_0001587 3300053083 Bacteria 3503
119 Ga0501084_0055963 3300054114 Bacteria 3300
120 Ga0501084_0139726 3300054114 Bacteria 2039
121 Ga0530510_0096163 3300061734 Bacteria 2164
122 Ga0530510_0150290 3300061734 Bacteria 1719

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025302 Ga0207426_1017551 Ga0207426_10175513 336
2 3300009094 Ga0111539_10034504 Ga0111539_100345045 367
3 3300049578 Ga0501042_0135806 Ga0501042_0135806_32_1267 367
4 3300050511 nmdc:mga08y16_84615_c1 nmdc:mga08y16_84615_c1_1546_2940 367
5 3300005981 Ga0081538_10023336 Ga0081538_100233365 368
6 3300031903 Ga0307407_10056336 Ga0307407_100563361 374
7 3300031995 Ga0307409_100062661 Ga0307409_1000626612 374
8 3300005329 Ga0070683_100207298 Ga0070683_1002072981 376
9 3300048903 Ga0496100_0001802 Ga0496100_0001802_8148_9686 380
10 3300005535 Ga0070684_100266484 Ga0070684_1002664841 382
11 3300047471 Ga0495684_0064041 Ga0495684_0064041_394_1797 383
12 3300048918 Ga0496115_0000067 Ga0496115_0000067_17656_19164 383
13 3300048918 Ga0496115_0000448 Ga0496115_0000448_6195_7703 383
14 3300049569 Ga0501032_0159151 Ga0501032_0159151_63_1367 384
15 3300049570 Ga0501033_0129876 Ga0501033_0129876_305_1609 384
16 3300049575 Ga0501039_0022987 Ga0501039_0022987_2206_3510 384
17 3300049576 Ga0501040_0060698 Ga0501040_0060698_898_2202 384
18 3300049582 Ga0501048_0064900 Ga0501048_0064900_1252_2556 384
19 3300049587 Ga0501071_0090533 Ga0501071_0090533_47_1351 384
20 3300049591 Ga0501075_0049037 Ga0501075_0049037_284_1588 384
21 3300049824 Ga0501045_0055034 Ga0501045_0055034_1417_2721 384
22 3300053083 Ga0495655_0001587 Ga0495655_0001587_1360_2760 384
23 3300009148 Ga0105243_10115730 Ga0105243_101157302 386
24 3300026067 Ga0207678_10184775 Ga0207678_101847751 387
25 3300044901 Ga0466960_0077179 Ga0466960_0077179_294_1634 387
26 3300048915 Ga0496112_0011985 Ga0496112_0011985_2542_3882 387
27 3300049568 Ga0501031_0048309 Ga0501031_0048309_172_1488 387
28 3300061734 Ga0530510_0150290 Ga0530510_0150290_221_1537 387
29 3300026118 Ga0207675_100097059 Ga0207675_1000970594 389
30 3300026121 Ga0207683_10097185 Ga0207683_100971853 389
31 3300026067 Ga0207678_10173657 Ga0207678_101736572 390
32 3300026121 Ga0207683_10101306 Ga0207683_101013063 391
33 3300003373 JGI25407J50210_10005748 JGI25407J50210_100057483 393
34 3300005981 Ga0081538_10000436 Ga0081538_1000043648 393
35 3300005981 Ga0081538_10010221 Ga0081538_1001022110 394
36 3300028800 Ga0265338_10021263 Ga0265338_100212632 397
37 3300031251 Ga0265327_10067744 Ga0265327_100677441 397
38 3300045976 Ga0466967_0036683 Ga0466967_0036683_830_2215 397
39 3300048907 Ga0496104_0000028 Ga0496104_0000028_198161_199609 397
40 3300048913 Ga0496110_0021574 Ga0496110_0021574_3715_5163 397
41 3300048914 Ga0496111_0000896 Ga0496111_0000896_11056_12504 397
42 3300053078 Ga0495612_0000072 Ga0495612_0000072_35014_36450 397
43 3300044719 Ga0466971_0018108 Ga0466971_0018108_116_1504 398
44 3300044719 Ga0466971_0059987 Ga0466971_0059987_41_1387 398
45 3300045836 Ga0466958_0005821 Ga0466958_0005821_1814_3202 398
46 3300045976 Ga0466967_0087188 Ga0466967_0087188_951_2297 398
47 3300046517 Ga0495630_0109812 Ga0495630_0109812_93_1460 398
48 3300046642 Ga0495634_0055704 Ga0495634_0055704_635_2002 398
49 3300005341 Ga0070691_10059397 Ga0070691_100593971 399
50 3300005441 Ga0070700_100040576 Ga0070700_1000405763 399
51 3300005543 Ga0070672_100152290 Ga0070672_1001522902 399
52 3300005981 Ga0081538_10007550 Ga0081538_100075502 399
53 3300025933 Ga0207706_10099986 Ga0207706_100999863 399
54 3300026075 Ga0207708_10005927 Ga0207708_100059277 399
55 3300026118 Ga0207675_100078739 Ga0207675_1000787393 399
56 3300026118 Ga0207675_100229328 Ga0207675_1002293281 399
57 3300045976 Ga0466967_0027905 Ga0466967_0027905_2880_4229 399
58 3300046543 Ga0495645_0000051 Ga0495645_0000051_71553_73010 399
59 3300048905 Ga0496102_0000002 Ga0496102_0000002_273114_274523 399
60 3300048906 Ga0496103_0000066 Ga0496103_0000066_58255_59664 399
61 3300053077 Ga0495601_0000852 Ga0495601_0000852_14431_15888 399
62 3300006844 Ga0075428_100080833 Ga0075428_1000808332 400
63 3300009094 Ga0111539_10089565 Ga0111539_100895652 400
64 3300009094 Ga0111539_10097477 Ga0111539_100974773 400
65 3300031731 Ga0307405_10052369 Ga0307405_100523694 400
66 3300031903 Ga0307407_10001981 Ga0307407_100019814 400
67 3300032002 Ga0307416_100020559 Ga0307416_1000205593 400
68 3300044694 Ga0466963_0040376 Ga0466963_0040376_1185_2576 400
69 3300005337 Ga0070682_100020772 Ga0070682_1000207723 401
70 3300005338 Ga0068868_100009321 Ga0068868_1000093213 401
71 3300005549 Ga0070704_100091535 Ga0070704_1000915352 401
72 3300005615 Ga0070702_100041592 Ga0070702_1000415922 401
73 3300005616 Ga0068852_100014595 Ga0068852_1000145953 401
74 3300005719 Ga0068861_100063641 Ga0068861_1000636411 401
75 3300009098 Ga0105245_10022220 Ga0105245_100222203 401
76 3300009098 Ga0105245_10139183 Ga0105245_101391831 401
77 3300009148 Ga0105243_10260581 Ga0105243_102605811 401
78 3300009551 Ga0105238_10106850 Ga0105238_101068503 401
79 3300025901 Ga0207688_10011978 Ga0207688_100119784 401
80 3300025944 Ga0207661_10121235 Ga0207661_101212351 401
81 3300026075 Ga0207708_10022707 Ga0207708_100227073 401
82 3300026118 Ga0207675_100055667 Ga0207675_1000556673 401
83 3300026142 Ga0207698_10033082 Ga0207698_100330822 401
84 3300027907 Ga0207428_10042919 Ga0207428_100429193 401
85 3300031824 Ga0307413_10080012 Ga0307413_100800122 401
86 3300031901 Ga0307406_10057660 Ga0307406_100576603 401
87 3300031995 Ga0307409_100009269 Ga0307409_1000092697 401
88 3300044694 Ga0466963_0024177 Ga0466963_0024177_2313_3704 401
89 3300045976 Ga0466967_0005853 Ga0466967_0005853_1116_2507 401
90 3300045976 Ga0466967_0020665 Ga0466967_0020665_209_1600 401
91 3300045976 Ga0466967_0066038 Ga0466967_0066038_1667_3058 401
92 3300046463 Ga0495653_0003166 Ga0495653_0003166_8176_9633 401
93 3300046477 Ga0495664_0000063 Ga0495664_0000063_19263_20666 401
94 3300046514 Ga0495618_0000113 Ga0495618_0000113_35545_36996 401
95 3300046517 Ga0495630_0002179 Ga0495630_0002179_12114_13571 401
96 3300046543 Ga0495645_0000063 Ga0495645_0000063_70396_71886 401
97 3300046675 Ga0495657_0000013 Ga0495657_0000013_36710_38167 401
98 3300046809 Ga0495600_0039812 Ga0495600_0039812_374_1777 401
99 3300049575 Ga0501039_0029286 Ga0501039_0029286_2571_3974 401
100 3300049577 Ga0501041_0089575 Ga0501041_0089575_275_1678 401
101 3300049591 Ga0501075_0110836 Ga0501075_0110836_181_1584 401
102 3300049741 Ga0501079_0073465 Ga0501079_0073465_745_2148 401
103 3300050511 nmdc:mga08y16_96020_c1 nmdc:mga08y16_96020_c1_204_1601 401
104 3300054114 Ga0501084_0055963 Ga0501084_0055963_1207_2622 401
105 3300054114 Ga0501084_0139726 Ga0501084_0139726_204_1607 401
106 3300061734 Ga0530510_0096163 Ga0530510_0096163_215_1630 401
107 3300053077 Ga0495601_0104706 Ga0495601_0104706_105_1547 402
108 3300048915 Ga0496112_0000126 Ga0496112_0000126_24462_25874 403
109 3300005981 Ga0081538_10042539 Ga0081538_100425393 404
110 3300009093 Ga0105240_10012367 Ga0105240_100123678 404
111 3300009545 Ga0105237_10002976 Ga0105237_1000297622 404
112 3300025913 Ga0207695_10086172 Ga0207695_100861722 404
113 3300025914 Ga0207671_10009788 Ga0207671_100097882 404
114 3300031251 Ga0265327_10016983 Ga0265327_100169835 404
115 3300047317 Ga0495604_0000828 Ga0495604_0000828_21562_23022 404
116 3300047471 Ga0495684_0015713 Ga0495684_0015713_3398_4930 404
117 3300031251 Ga0265327_10006517 Ga0265327_100065172 406
118 3300006175 Ga0070712_100000001 Ga0070712_10000000180 407
119 3300049823 Ga0501044_0195545 Ga0501044_0195545_280_1695 408
120 3300003203 JGI25406J46586_10013159 JGI25406J46586_100131592 410
121 3300005614 Ga0068856_100095808 Ga0068856_1000958082 410
122 3300005985 Ga0081539_10005888 Ga0081539_100058885 410

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05698

Trigger_C

Bacterial trigger factor protein (TF) C-terminus

294

455

0.99

PF05697

Trigger_N

Bacterial trigger factor protein (TF)

8

153

0.96

PF00254

FKBP_C

FKBP-type peptidyl-prolyl cis-trans isomerase

163

272

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
1hxv-assembly1.cif.gz_A ppiase domain of the mycoplasma genitalium trigger factor 0.8617 152 232
1hxv-assembly1.cif.gz_A ppiase domain of the mycoplasma genitalium trigger factor 0.8175 152 232
2pbc-assembly4.cif.gz_D fk506-binding protein 2 0.8167 147 233
7oxg-assembly1.cif.gz_A ttslyd fkbp domain with m8a pseudo-wild-type s2 peptide 0.8162 150 239
4nnr-assembly2.cif.gz_B fkbp13-fk506 complex 0.7988 150 240
ID Description Score Start End Superfamily
af_Q5Z4M6_246_353_1.10.3120.10 Mainly Alpha;Orthogonal Bundle;Trigger factor, domain 2;Trigger factor, C-terminal domain 0.9065 142 239 1.10.3120.10
af_P9WG55_151_243_1.10.3120.10 Mainly Alpha;Orthogonal Bundle;Trigger factor, domain 2;Trigger factor, C-terminal domain 0.9006 143 239 1.10.3120.10
2mlzA03 Alpha Beta;Roll;Chitinase A; domain 3; 0.8961 143 239 3.10.50.40
af_P9WG55_151_243_1.10.3120.10 Mainly Alpha;Orthogonal Bundle;Trigger factor, domain 2;Trigger factor, C-terminal domain 0.8917 143 239 1.10.3120.10
2mlzA03 Alpha Beta;Roll;Chitinase A; domain 3; 0.8877 143 239 3.10.50.40
ID Description Score Start End GO Terms
AF-A0A800C5K1-F1-model_v4 peptidylprolyl isomerase (EC 5.2.1.8) 0.9505 145 230 GO:0003755
GO:0005829
GO:0031419
GO:0046872
GO:0051539
AF-A0A1B1BWY8-F1-model_v4 deleted 0.9333 128 239
AF-A0A538LX35-F1-model_v4 Trigger factor (TF) (EC 5.2.1.8) (PPIase) 0.9258 14 409 GO:0005737
GO:0015031
GO:0043022
GO:0043335
GO:0044183
GO:0051083
GO:0051301
GO:0061077
GO:0140839
GO:0140840
AF-A0A538LX35-F1-model_v4 Trigger factor (TF) (EC 5.2.1.8) (PPIase) 0.8932 14 409 GO:0005737
GO:0015031
GO:0043022
GO:0043335
GO:0044183
GO:0051083
GO:0051301
GO:0061077
GO:0140839
GO:0140840
AF-A0A350NNS0-F1-model_v4 peptidylprolyl isomerase (EC 5.2.1.8) 0.8039 109 403 GO:0005737
GO:0006457
GO:0015031
GO:0051301
GO:0140839
GO:0140840

Feature Viewer

pLDDT pTM Quality
85.1 0.69 Medium
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Predicted Structure (AlphaFold2)

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