F094213

General Info

Members Datasets Scaffolds Average Seq Length
117 79 117 264

Family's Representative Sequence

Representative Sequence 3300046457|Ga0495590_0036573|Ga0495590_0036573_541_1386
Length 281
Sequence LLLSKKNKNNDKTDINVRLLYLGDVMGKPGRQVVSALLPKLRTQYKPDIIVAQAENVSHGKSITPQHMRELQAFGIDFFTGGNHTIERPATLSLLENPAEPIIAPLNQVGVESTWGTKTLQTTEGPLRFISLLGTTFPIVEPLASNPLQAIDQVLAESDAKITTIVNFHGDFSSEKRVIGYYLDGRVAAVIGDHWHVPTADAMILPDGTAHITDVGMCGTLHSSLGVQKELIIKRWRDDAKGRNEMAEDGPFQLNAVLVTIDMKRGSATSIESINKIIDEL

Samples

Sample ID Description Type Environment
1 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
16 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
17 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
18 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
19 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
21 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
24 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
25 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
28 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
29 3300009987 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_213 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
33 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
34 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
35 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
51 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
52 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
53 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
54 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
55 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
56 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
57 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
58 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
59 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
60 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
61 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
62 3300049773 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_B_4_control Metagenome Rhizosphere
63 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
64 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
65 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
66 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
67 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
68 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
69 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
70 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
71 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
72 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
73 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
74 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
75 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
76 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
77 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
78 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
79 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 26.5
Nodule 0
Rhizoplane 0.85
Rhizosphere 65.81
Stem 0
Stem Tuber 0
Unclassified 6.84

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10032844 3300001990 Unclassified 1614
2 rootH2_10107466 3300003320 Bacteria 2418
3 rootL2_10240784 3300003322 Bacteria 1541
4 rootL2_10367436 3300003322 Bacteria 1964
5 rootH1_10067659 3300003323 Unclassified 1338
6 rootH1_10167312 3300003323 Bacteria 1078
7 Ga0070666_10002721 3300005335 Bacteria 10679
8 Ga0070666_10257117 3300005335 Bacteria 1237
9 Ga0070668_100023820 3300005347 Unclassified 4634
10 Ga0070671_100000001 3300005355 Bacteria 1228151
11 Ga0070671_100186129 3300005355 Bacteria 1759
12 Ga0070674_100014015 3300005356 Bacteria 4975
13 Ga0070678_100028456 3300005456 Bacteria 3812
14 Ga0070684_100004545 3300005535 Bacteria 10570
15 Ga0068853_100018123 3300005539 Bacteria 5823
16 Ga0070665_100346645 3300005548 Unclassified 1490
17 Ga0068855_100000001 3300005563 Bacteria 818777
18 Ga0068855_100022217 3300005563 Bacteria 7603
19 Ga0068855_100191585 3300005563 Bacteria 2306
20 Ga0068855_100475165 3300005563 Bacteria 1361
21 Ga0068857_100044053 3300005577 Bacteria 3958
22 Ga0075365_10000002 3300006038 Bacteria 226306
23 Ga0075365_10001477 3300006038 Bacteria 10697
24 Ga0075364_10002511 3300006051 Bacteria 10273
25 Ga0075364_10004294 3300006051 Bacteria 8182
26 Ga0075364_10004358 3300006051 Bacteria 8125
27 Ga0075364_10009981 3300006051 Bacteria 5717
28 Ga0075362_10070824 3300006177 Bacteria 1592
29 Ga0075366_10000028 3300006195 Bacteria 50296
30 Ga0097621_100000001 3300006237 Bacteria 632268
31 Ga0068871_100000008 3300006358 Bacteria 115827
32 Ga0075430_100025936 3300006846 Bacteria 4988
33 Ga0075430_100143470 3300006846 Bacteria 1989
34 Ga0105240_10000048 3300009093 Bacteria 237451
35 Ga0105240_10549793 3300009093 Bacteria 1277
36 Ga0105240_10564004 3300009093 Bacteria 1258
37 Ga0105241_10000003 3300009174 Bacteria 839043
38 Ga0105242_10014679 3300009176 Bacteria 6066
39 Ga0105237_10016143 3300009545 Bacteria 7767
40 Ga0105237_10062967 3300009545 Bacteria 3708
41 Ga0105238_10016143 3300009551 Bacteria 7555
42 Ga0105238_10271039 3300009551 Bacteria 1678
43 Ga0105249_10293014 3300009553 Bacteria 1629
44 Ga0105033_100015 3300009986 Bacteria 17160
45 Ga0105030_101179 3300009987 Bacteria 2321
46 Ga0105239_10022330 3300010375 Bacteria 6977
47 Ga0105239_10156320 3300010375 Bacteria 2546
48 Ga0157369_10000054 3300013105 Bacteria 162631
49 Ga0157372_10149157 3300013307 Bacteria 2698
50 Ga0157372_10208794 3300013307 Bacteria 2263
51 Ga0157380_10077223 3300014326 Unclassified 2713
52 Ga0157377_10002301 3300014745 Bacteria 8402
53 Ga0207680_10000309 3300025903 Bacteria 23267
54 Ga0207647_10000004 3300025904 Bacteria 307217
55 Ga0207647_10006124 3300025904 Bacteria 8765
56 Ga0207654_10000002 3300025911 Bacteria 1460142
57 Ga0207695_10000985 3300025913 Bacteria 50515
58 Ga0207695_10254370 3300025913 Bacteria 1655
59 Ga0207671_10000014 3300025914 Bacteria 461481
60 Ga0207671_10043124 3300025914 Bacteria 3336
61 Ga0207694_10083210 3300025924 Bacteria 2516
62 Ga0207694_10374227 3300025924 Bacteria 1181
63 Ga0207644_10000001 3300025931 Bacteria 1243214
64 Ga0207686_10002091 3300025934 Bacteria 10999
65 Ga0207669_10015153 3300025937 Bacteria 3880
66 Ga0207667_10000003 3300025949 Bacteria 822935
67 Ga0207667_10035035 3300025949 Bacteria 5387
68 Ga0207667_10445242 3300025949 Bacteria 1317
69 Ga0207712_10232534 3300025961 Bacteria 1480
70 Ga0207658_10145755 3300025986 Bacteria 1922
71 Ga0207639_10090568 3300026041 Unclassified 2447
72 Ga0207674_10106131 3300026116 Bacteria 2787
73 Ga0207683_10011364 3300026121 Bacteria 7596
74 Ga0265338_10000189 3300028800 Bacteria 115979
75 Ga0265338_10001245 3300028800 Bacteria 41988
76 Ga0265338_10003132 3300028800 Bacteria 23629
77 Ga0265338_10022064 3300028800 Bacteria 6613
78 Ga0265338_10044229 3300028800 Bacteria 4115
79 Ga0265324_10002315 3300029957 Bacteria 9878
80 Ga0265324_10074015 3300029957 Bacteria 1160
81 Ga0307509_10003157 3300031507 Bacteria 25520
82 Ga0307516_10000086 3300031730 Bacteria 102989
83 Ga0373959_0000014 3300034820 Bacteria 43858
84 Ga0451807_1889875 3300041486 Bacteria 2407
85 Ga0439442_021929 3300042002 Unclassified 1325
86 Ga0439446_0079229 3300042156 Unclassified 1015
87 Ga0495590_0036573 3300046457 Bacteria 1713
88 Ga0495583_0063362 3300046506 Bacteria 1643
89 Ga0495672_0000010 3300047320 Bacteria 545038
90 Ga0495672_0101916 3300047320 Unclassified 1555
91 Ga0496118_0035095 3300048921 Bacteria 4079
92 Ga0501276_000457 3300049773 Bacteria 2497
93 nmdc:mga03683_14253_c2 3300050489 Bacteria 2522
94 nmdc:mga00v17_2083_c1 3300050491 Bacteria 10291
95 nmdc:mga00v17_3463_c1 3300050491 Bacteria 8169
96 nmdc:mga00v17_43794_c1 3300050491 Bacteria 2697
97 nmdc:mga00v17_7318_c1 3300050491 Bacteria 5884
98 nmdc:mga0yw44_36302_c1 3300050492 Bacteria 2903
99 nmdc:mga0yw44_3_c1 3300050492 Bacteria 561857
100 nmdc:mga0yw44_4896_c1 3300050492 Bacteria 6231
101 nmdc:mga0yw44_796_c1 3300050492 Bacteria 11751
102 nmdc:mga0k408_69_c2 3300050493 Bacteria 50340
103 nmdc:mga0qj67_29311_c1 3300050509 Unclassified 4275
104 nmdc:mga0qj67_344573_c1 3300050509 Bacteria 1205
105 Ga0500643_000034 3300053087 Bacteria 185705
106 Ga0500646_0017288 3300053090 Bacteria 1890
107 Ga0500651_0000634 3300053093 Bacteria 17490
108 Ga0500555_000001 3300053103 Bacteria 1353713
109 Ga0500562_000001 3300053108 Bacteria 1178987
110 Ga0500628_000393 3300053129 Bacteria 8252
111 Ga0500628_000477 3300053129 Bacteria 7491
112 Ga0500655_003644 3300053133 Bacteria 2774
113 Ga0500568_0003217 3300053139 Bacteria 9264
114 Ga0500577_0000400 3300053142 Bacteria 11104
115 Ga0500622_0179685 3300053156 Bacteria 979
116 Ga0500627_0021108 3300053158 Bacteria 2624
117 Ga0500570_000012 3300053724 Bacteria 72515

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300006195 Ga0075366_10000028 Ga0075366_1000002852 228
2 3300050493 nmdc:mga0k408_69_c2 nmdc:mga0k408_69_c2_45300_46082 228
3 3300053103 Ga0500555_000001 Ga0500555_000001_301267_302067 228
4 3300005456 Ga0070678_100028456 Ga0070678_1000284563 229
5 3300026121 Ga0207683_10011364 Ga0207683_100113645 229
6 3300053142 Ga0500577_0000400 Ga0500577_0000400_5924_6736 230
7 3300025986 Ga0207658_10145755 Ga0207658_101457553 233
8 3300053093 Ga0500651_0000634 Ga0500651_0000634_7564_8376 235
9 3300053139 Ga0500568_0003217 Ga0500568_0003217_5093_5878 235
10 3300009093 Ga0105240_10549793 Ga0105240_105497932 237
11 3300009545 Ga0105237_10016143 Ga0105237_100161432 237
12 3300009551 Ga0105238_10016143 Ga0105238_100161437 237
13 3300009987 Ga0105030_101179 Ga0105030_1011793 237
14 3300013307 Ga0157372_10149157 Ga0157372_101491572 237
15 3300025914 Ga0207671_10000014 Ga0207671_10000014411 237
16 3300025924 Ga0207694_10083210 Ga0207694_100832106 237
17 3300006846 Ga0075430_100025936 Ga0075430_1000259365 239
18 3300009093 Ga0105240_10000048 Ga0105240_10000048171 239
19 3300009545 Ga0105237_10062967 Ga0105237_100629674 239
20 3300013307 Ga0157372_10208794 Ga0157372_102087942 239
21 3300025913 Ga0207695_10000985 Ga0207695_1000098520 239
22 3300025914 Ga0207671_10043124 Ga0207671_100431245 239
23 3300028800 Ga0265338_10001245 Ga0265338_100012457 239
24 3300028800 Ga0265338_10044229 Ga0265338_100442292 239
25 3300046457 Ga0495590_0036573 Ga0495590_0036573_541_1386 239
26 3300050509 nmdc:mga0qj67_29311_c1 nmdc:mga0qj67_29311_c1_1381_2172 239
27 3300053108 Ga0500562_000001 Ga0500562_000001_1070087_1070932 239
28 3300053133 Ga0500655_003644 Ga0500655_003644_1715_2560 239
29 3300003320 rootH2_10107466 rootH2_101074664 240
30 3300005335 Ga0070666_10257117 Ga0070666_102571172 240
31 3300005355 Ga0070671_100000001 Ga0070671_100000001966 240
32 3300005355 Ga0070671_100186129 Ga0070671_1001861292 240
33 3300005539 Ga0068853_100018123 Ga0068853_1000181235 240
34 3300005563 Ga0068855_100022217 Ga0068855_10002221710 240
35 3300005577 Ga0068857_100044053 Ga0068857_1000440533 240
36 3300006038 Ga0075365_10000002 Ga0075365_1000000264 240
37 3300006038 Ga0075365_10001477 Ga0075365_100014772 240
38 3300006051 Ga0075364_10002511 Ga0075364_100025118 240
39 3300006051 Ga0075364_10004294 Ga0075364_100042944 240
40 3300006051 Ga0075364_10004358 Ga0075364_100043587 240
41 3300006051 Ga0075364_10009981 Ga0075364_100099814 240
42 3300006846 Ga0075430_100143470 Ga0075430_1001434702 240
43 3300009093 Ga0105240_10564004 Ga0105240_105640042 240
44 3300009176 Ga0105242_10014679 Ga0105242_100146795 240
45 3300009551 Ga0105238_10271039 Ga0105238_102710392 240
46 3300010375 Ga0105239_10022330 Ga0105239_100223306 240
47 3300010375 Ga0105239_10156320 Ga0105239_101563202 240
48 3300025904 Ga0207647_10006124 Ga0207647_100061249 240
49 3300025913 Ga0207695_10254370 Ga0207695_102543703 240
50 3300025924 Ga0207694_10374227 Ga0207694_103742272 240
51 3300025931 Ga0207644_10000001 Ga0207644_10000001471 240
52 3300025934 Ga0207686_10002091 Ga0207686_100020916 240
53 3300025949 Ga0207667_10035035 Ga0207667_100350354 240
54 3300026041 Ga0207639_10090568 Ga0207639_100905683 240
55 3300026116 Ga0207674_10106131 Ga0207674_101061312 240
56 3300028800 Ga0265338_10000189 Ga0265338_1000018935 240
57 3300028800 Ga0265338_10022064 Ga0265338_100220646 240
58 3300029957 Ga0265324_10074015 Ga0265324_100740152 240
59 3300031507 Ga0307509_10003157 Ga0307509_100031573 240
60 3300041486 Ga0451807_1889875 Ga0451807_1889875_619_1419 240
61 3300042002 Ga0439442_021929 Ga0439442_021929_98_910 240
62 3300042156 Ga0439446_0079229 Ga0439446_0079229_118_930 240
63 3300046506 Ga0495583_0063362 Ga0495583_0063362_306_1109 240
64 3300047320 Ga0495672_0000010 Ga0495672_0000010_216043_216843 240
65 3300050491 nmdc:mga00v17_2083_c1 nmdc:mga00v17_2083_c1_5110_5922 240
66 3300050491 nmdc:mga00v17_3463_c1 nmdc:mga00v17_3463_c1_2603_3406 240
67 3300050491 nmdc:mga00v17_43794_c1 nmdc:mga00v17_43794_c1_239_1015 240
68 3300050491 nmdc:mga00v17_7318_c1 nmdc:mga00v17_7318_c1_1521_2330 240
69 3300050492 nmdc:mga0yw44_3_c1 nmdc:mga0yw44_3_c1_253484_254287 240
70 3300050492 nmdc:mga0yw44_4896_c1 nmdc:mga0yw44_4896_c1_3975_4772 240
71 3300050492 nmdc:mga0yw44_796_c1 nmdc:mga0yw44_796_c1_1163_1972 240
72 3300050509 nmdc:mga0qj67_344573_c1 nmdc:mga0qj67_344573_c1_122_916 240
73 3300053087 Ga0500643_000034 Ga0500643_000034_51585_52385 240
74 3300053090 Ga0500646_0017288 Ga0500646_0017288_207_980 240
75 3300053156 Ga0500622_0179685 Ga0500622_0179685_38_808 240
76 3300001990 JGI24737J22298_10032844 JGI24737J22298_100328443 241
77 3300003322 rootL2_10240784 rootL2_102407843 241
78 3300003322 rootL2_10367436 rootL2_103674362 241
79 3300003323 rootH1_10067659 rootH1_100676591 241
80 3300003323 rootH1_10167312 rootH1_101673122 241
81 3300005335 Ga0070666_10002721 Ga0070666_100027219 241
82 3300005347 Ga0070668_100023820 Ga0070668_1000238206 241
83 3300005356 Ga0070674_100014015 Ga0070674_1000140155 241
84 3300005535 Ga0070684_100004545 Ga0070684_1000045454 241
85 3300005548 Ga0070665_100346645 Ga0070665_1003466452 241
86 3300005563 Ga0068855_100000001 Ga0068855_100000001552 241
87 3300005563 Ga0068855_100191585 Ga0068855_1001915853 241
88 3300005563 Ga0068855_100475165 Ga0068855_1004751652 241
89 3300006177 Ga0075362_10070824 Ga0075362_100708241 241
90 3300006237 Ga0097621_100000001 Ga0097621_100000001461 241
91 3300006358 Ga0068871_100000008 Ga0068871_10000000863 241
92 3300009174 Ga0105241_10000003 Ga0105241_10000003850 241
93 3300009553 Ga0105249_10293014 Ga0105249_102930142 241
94 3300009986 Ga0105033_100015 Ga0105033_10001511 241
95 3300013105 Ga0157369_10000054 Ga0157369_1000005478 241
96 3300014326 Ga0157380_10077223 Ga0157380_100772234 241
97 3300014745 Ga0157377_10002301 Ga0157377_1000230110 241
98 3300025903 Ga0207680_10000309 Ga0207680_1000030918 241
99 3300025904 Ga0207647_10000004 Ga0207647_10000004218 241
100 3300025911 Ga0207654_10000002 Ga0207654_10000002358 241
101 3300025937 Ga0207669_10015153 Ga0207669_100151533 241
102 3300025949 Ga0207667_10000003 Ga0207667_10000003540 241
103 3300025949 Ga0207667_10445242 Ga0207667_104452422 241
104 3300025961 Ga0207712_10232534 Ga0207712_102325342 241
105 3300028800 Ga0265338_10003132 Ga0265338_1000313224 241
106 3300029957 Ga0265324_10002315 Ga0265324_1000231511 241
107 3300031730 Ga0307516_10000086 Ga0307516_1000008621 241
108 3300034820 Ga0373959_0000014 Ga0373959_0000014_20719_21537 241
109 3300047320 Ga0495672_0101916 Ga0495672_0101916_698_1516 241
110 3300048921 Ga0496118_0035095 Ga0496118_0035095_3179_3994 241
111 3300049773 Ga0501276_000457 Ga0501276_000457_379_1185 241
112 3300050489 nmdc:mga03683_14253_c2 nmdc:mga03683_14253_c2_993_1811 241
113 3300050492 nmdc:mga0yw44_36302_c1 nmdc:mga0yw44_36302_c1_1325_2128 241
114 3300053129 Ga0500628_000393 Ga0500628_000393_2599_3399 241
115 3300053129 Ga0500628_000477 Ga0500628_000477_426_1223 241
116 3300053158 Ga0500627_0021108 Ga0500627_0021108_661_1458 241
117 3300053724 Ga0500570_000012 Ga0500570_000012_40702_41499 241

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13277

YmdB

YmdB-like protein

20

274

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
4b2o-assembly1.cif.gz_D crystal structure of bacillus subtilis ymdb, a global regulator of late adaptive responses. 0.9239 3 238
4b2o-assembly1.cif.gz_D crystal structure of bacillus subtilis ymdb, a global regulator of late adaptive responses. 0.909 3 238
1t71-assembly1.cif.gz_A crystal structure of a novel phosphatase mycoplasma pneumoniaefrom 0.8878 3 238
1t70-assembly3.cif.gz_E crystal structure of a novel phosphatase from deinococcus radiodurans 0.8855 3 238
2cv9-assembly1.cif.gz_A crystal structure of a hypothetical protein from thermus thermophilus hb8 0.8778 3 238
ID Description Score Start End Superfamily
4b2oD00 Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases 0.9239 3 238 3.60.21.10
4b2oD00 Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases 0.909 3 238 3.60.21.10
1t71A00 Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases 0.8878 3 238 3.60.21.10
2z06B00 Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases 0.8836 1 238 3.60.21.10
2z06B00 Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases 0.8765 1 238 3.60.21.10
ID Description Score Start End GO Terms
AF-A0A661BEZ6-F1-model_v4 Metallophosphoesterase 0.9735 123 239 GO:0004113
AF-Q6YQU9-F1-model_v4 Metallophosphoesterase 0.969 128 181 GO:0004113
AF-X1VGI3-F1-model_v4 Metallophosphoesterase 0.9688 127 239 GO:0004113
AF-A0A3D1FFN4-F1-model_v4 deleted 0.968 132 239
AF-A0A7C0X4N3-F1-model_v4 Metallophosphoesterase 0.967 123 238 GO:0004113

Feature Viewer

pLDDT pTM Quality
90.89 0.9 High
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Predicted Structure (AlphaFold2)

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