F089090

General Info

Members Datasets Scaffolds Average Seq Length
116 101 110 403

Family's Representative Sequence

Representative Sequence 3300035090|Ga0373949_0000245|Ga0373949_0000245_11606_12994
Length 462
Sequence MLPSPPPTERTATLNARRELKMARSAHAYVRGSTERFYEWIRSSAGRRVPQGPAVWICGDCHVGNLGPIGHPAGQAVVELRDLDQTVIGNPAHDVVRLVLSLAMAARSSDLPGVTTTRLTEDLVAGYERAFEGKVPSEAIDDLPSPIRLVMKRAVRRTWKRLFEERLGEHCRGIPIGRQFWRLADDERAAVRQLVALEPIRHLVTRLESRADSATISFVDAAFWVKGCSSLGLWRAAVLVEIADRSKKGRPRHMLSLLDIKQAVDATAPWAPGSDPTLDPAERVLTGARKLAPALGSRMVAATMLDRSVFIRELLPQDLKVELDRVSAEDARAVAFYLGMVVGRAHGRQLDAAGRHAWHREMATHRTKNLDAPSWLWQALVELVAVHEHAYLEHCRRYALAADRASEGGAAKIDSVPVEPDVVPAQDGETSPADAVSSVTAQSATSPEIVAAAANELVPDPA

Samples

Sample ID Description Type Environment
1 2739367700 Dyella sp. YR388 Isolate Unclassified
2 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
3 2884411467 Dyella sp. AD56 Isolate Rhizosphere
4 2906610324
5 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
6 2928963466 Dyella japonica 1073 Isolate Unclassified
7 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
8 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
9 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
10 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
11 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
12 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
13 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
14 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
29 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
35 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
38 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
39 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
40 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
42 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
44 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
59 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
62 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
63 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
64 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
65 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
66 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
67 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
68 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
69 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
70 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
71 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
72 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
73 3300041441 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_1 MetaG Metagenome Rhizoplane
74 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
75 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
76 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
77 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
78 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
79 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
80 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
81 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
82 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
83 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
84 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
85 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
86 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
87 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
88 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
89 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
90 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
91 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
92 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
93 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
94 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
95 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
96 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
97 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
98 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
99 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
100 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
101 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.78
Metatranscriptomes 0.87
Isolates 4.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.76
Nodule 2.59
Rhizoplane 7.76
Rhizosphere 62.93
Stem 0
Stem Tuber 0
Unclassified 18.97

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000946 3300002737 Bacteria 18630
2 rootH1_10016616 3300003316 Bacteria 4454
3 rootL2_10137874 3300003322 Bacteria 4583
4 rootH1_10155098 3300003323 Bacteria 6520
5 Ga0055542_1000340 3300003762 Bacteria 49481
6 Ga0065165_1012337 3300005262 Bacteria 3487
7 Ga0070666_10003329 3300005335 Bacteria 9740
8 Ga0070682_100007129 3300005337 Bacteria 6294
9 Ga0070689_100028781 3300005340 Bacteria 4203
10 Ga0070661_100078758 3300005344 Bacteria 2431
11 Ga0070668_100000865 3300005347 Bacteria 21037
12 Ga0070667_100000103 3300005367 Bacteria 107232
13 Ga0070710_10018306 3300005437 Bacteria 3602
14 Ga0070678_100002221 3300005456 Bacteria 10555
15 Ga0070679_100089641 3300005530 Bacteria 3063
16 Ga0070697_100113035 3300005536 Bacteria 2265
17 Ga0070672_100046085 3300005543 Bacteria 3377
18 Ga0068855_100000018 3300005563 Bacteria 208298
19 Ga0068856_100078213 3300005614 Bacteria 3279
20 Ga0068863_100005747 3300005841 Bacteria 12169
21 Ga0068860_100002787 3300005843 Bacteria 18176
22 Ga0070712_100003720 3300006175 Bacteria 9392
23 Ga0097621_100341773 3300006237 Bacteria 1329
24 Ga0068865_100156901 3300006881 Bacteria 1732
25 Ga0079104_1001010 3300006946 Bacteria 21831
26 Ga0105245_10000114 3300009098 Bacteria 78195
27 Ga0105245_10005737 3300009098 Bacteria 10895
28 Ga0105238_10065943 3300009551 Bacteria 3622
29 Ga0157370_10178144 3300013104 Bacteria 1976
30 Ga0157374_10006495 3300013296 Bacteria 9928
31 Ga0163162_10036016 3300013306 Bacteria 4930
32 Ga0157379_10265377 3300014968 Bacteria 1560
33 Ga0157376_10033508 3300014969 Bacteria 4136
34 Ga0224572_1009374 3300024225 Bacteria 1826
35 Ga0209672_100801 3300025228 Bacteria 14893
36 Ga0209437_100076 3300025233 Bacteria 295194
37 Ga0209258_103200 3300025242 Bacteria 3665
38 Ga0209026_1006689 3300025250 Bacteria 2766
39 Ga0209148_1000002 3300025254 Bacteria 2399500
40 Ga0209455_1004310 3300025272 Bacteria 4705
41 Ga0207680_10005721 3300025903 Bacteria 5957
42 Ga0207693_10009516 3300025915 Bacteria 7915
43 Ga0207652_10112442 3300025921 Bacteria 2416
44 Ga0207687_10000051 3300025927 Bacteria 92954
45 Ga0207670_10067496 3300025936 Bacteria 2461
46 Ga0207704_10119145 3300025938 Bacteria 1802
47 Ga0207691_10060785 3300025940 Bacteria 3433
48 Ga0207667_10000164 3300025949 Bacteria 98140
49 Ga0207668_10000231 3300025972 Bacteria 37525
50 Ga0207658_10000080 3300025986 Bacteria 107226
51 Ga0207702_10120445 3300026078 Bacteria 2348
52 Ga0207641_10002673 3300026088 Bacteria 16282
53 Ga0209281_1000035 3300027111 Bacteria 382327
54 Ga0268265_10093434 3300028380 Bacteria 2410
55 Ga0268264_10036531 3300028381 Bacteria 4048
56 Ga0265337_1001190 3300028556 Bacteria 13223
57 Ga0265338_10032057 3300028800 Bacteria 5137
58 Ga0265760_10005595 3300031090 Unclassified 3596
59 Ga0265332_10030739 3300031238 Unclassified 2344
60 Ga0265320_10018183 3300031240 Unclassified 3878
61 Ga0265339_10008130 3300031249 Bacteria 6696
62 Ga0265316_10000638 3300031344 Bacteria 39035
63 Ga0265314_10000001 3300031711 Bacteria 3792860
64 Ga0265314_10089535 3300031711 Bacteria 2007
65 Ga0265314_10108880 3300031711 Bacteria 1764
66 Ga0373949_0000245 3300035090 Bacteria 20357
67 Ga0395905_0000292 3300037471 Bacteria 73325
68 Ga0395905_0107830 3300037471 Bacteria 2615
69 Ga0436365_1622703 3300039437 Bacteria 8016
70 Ga0436363_0253733 3300039450 Bacteria 1582
71 Ga0436363_0451306 3300039450 Bacteria 1944
72 Ga0451787_791991 3300041441 Bacteria 1729
73 Ga0451807_0060176 3300041486 Bacteria 5181
74 Ga0466961_0079432 3300044693 Bacteria 2077
75 Ga0466971_0023593 3300044719 Bacteria 2743
76 Ga0466968_0021118 3300044735 Bacteria 2635
77 Ga0466960_0006109 3300044901 Bacteria 4817
78 Ga0495638_0000288 3300046460 Bacteria 66416
79 Ga0495606_0000638 3300046507 Bacteria 55027
80 Ga0495606_0009121 3300046507 Bacteria 8448
81 Ga0495630_0017329 3300046517 Bacteria 5276
82 Ga0495622_0012282 3300046557 Bacteria 3961
83 Ga0495668_0006368 3300046616 Bacteria 7738
84 Ga0495686_0000316 3300047472 Bacteria 80803
85 Ga0495686_0002446 3300047472 Bacteria 17537
86 Ga0495686_0053223 3300047472 Bacteria 2537
87 Ga0495686_0062390 3300047472 Bacteria 2312
88 Ga0496101_0043407 3300048904 Bacteria 3215
89 Ga0496104_0000146 3300048907 Bacteria 65212
90 Ga0496105_0000025 3300048908 Bacteria 150594
91 Ga0496114_0148087 3300048917 Bacteria 2036
92 Ga0496115_0001149 3300048918 Bacteria 19121
93 Ga0496115_0020116 3300048918 Bacteria 5144
94 Ga0496115_0023968 3300048918 Bacteria 4739
95 Ga0496116_0000039 3300048919 Bacteria 349134
96 Ga0496116_0002279 3300048919 Bacteria 20349
97 Ga0496117_0080358 3300048920 Bacteria 2145
98 Ga0496118_0010351 3300048921 Bacteria 9242
99 Ga0496120_0077486 3300048923 Bacteria 1809
100 Ga0496122_0000185 3300048925 Bacteria 144350
101 Ga0496123_0000105 3300048926 Bacteria 167806
102 Ga0496124_0023197 3300048927 Bacteria 5671
103 Ga0496124_0064819 3300048927 Bacteria 3049
104 Ga0496126_0000437 3300048929 Bacteria 83133
105 Ga0496126_0001292 3300048929 Bacteria 40032
106 Ga0496126_0027626 3300048929 Bacteria 5416
107 Ga0501070_0031428 3300049586 Bacteria 4449
108 Ga0495601_0092845 3300053077 Bacteria 1944
109 Ga0500578_0051361 3300053086 Bacteria 2641
110 Ga0501084_0034534 3300054114 Bacteria 4229

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005337 Ga0070682_100007129 Ga0070682_1000071296 354
2 3300005335 Ga0070666_10003329 Ga0070666_100033295 356
3 3300028381 Ga0268264_10036531 Ga0268264_100365312 356
4 iso_pu_bacteria 2928531327 2928533801 358
5 3300046616 Ga0495668_0006368 Ga0495668_0006368_5331_6461 362
6 3300048923 Ga0496120_0077486 Ga0496120_0077486_640_1785 362
7 3300005543 Ga0070672_100046085 Ga0070672_1000460852 363
8 3300025940 Ga0207691_10060785 Ga0207691_100607852 363
9 3300006237 Ga0097621_100341773 Ga0097621_1003417731 364
10 iso_pu_bacteria 2791355197 2793072571 373
11 iso_pu_bacteria 2906610324 2906613406 373
12 3300003322 rootL2_10137874 rootL2_101378742 379
13 3300037471 Ga0395905_0000292 Ga0395905_0000292_50407_51603 379
14 3300044693 Ga0466961_0079432 Ga0466961_0079432_274_1473 379
15 3300014968 Ga0157379_10265377 Ga0157379_102653771 380
16 3300024225 Ga0224572_1009374 Ga0224572_10093741 380
17 3300031090 Ga0265760_10005595 Ga0265760_100055956 380
18 3300048929 Ga0496126_0000437 Ga0496126_0000437_57153_58349 380
19 3300053077 Ga0495601_0092845 Ga0495601_0092845_515_1708 380
20 3300005347 Ga0070668_100000865 Ga0070668_10000086516 381
21 3300005367 Ga0070667_100000103 Ga0070667_10000010316 381
22 3300005841 Ga0068863_100005747 Ga0068863_1000057478 381
23 3300005843 Ga0068860_100002787 Ga0068860_10000278713 381
24 3300006946 Ga0079104_1001010 Ga0079104_100101010 381
25 3300025903 Ga0207680_10005721 Ga0207680_100057218 381
26 3300025972 Ga0207668_10000231 Ga0207668_100002319 381
27 3300025986 Ga0207658_10000080 Ga0207658_1000008090 381
28 3300026088 Ga0207641_10002673 Ga0207641_100026739 381
29 3300027111 Ga0209281_1000035 Ga0209281_1000035277 381
30 3300044719 Ga0466971_0023593 Ga0466971_0023593_1077_2279 381
31 3300005262 Ga0065165_1012337 Ga0065165_10123372 383
32 3300039437 Ga0436365_1622703 Ga0436365_1622703_3422_4642 383
33 3300039450 Ga0436363_0253733 Ga0436363_0253733_190_1383 383
34 3300047472 Ga0495686_0000316 Ga0495686_0000316_71081_72295 383
35 3300047472 Ga0495686_0053223 Ga0495686_0053223_822_2075 383
36 3300048925 Ga0496122_0000185 Ga0496122_0000185_86002_87213 383
37 3300048926 Ga0496123_0000105 Ga0496123_0000105_57004_58215 383
38 3300048927 Ga0496124_0023197 Ga0496124_0023197_3874_5085 383
39 3300048927 Ga0496124_0064819 Ga0496124_0064819_1738_2949 383
40 3300005456 Ga0070678_100002221 Ga0070678_10000222110 384
41 3300005614 Ga0068856_100078213 Ga0068856_1000782133 384
42 3300009098 Ga0105245_10000114 Ga0105245_1000011441 384
43 3300013296 Ga0157374_10006495 Ga0157374_100064952 384
44 3300025927 Ga0207687_10000051 Ga0207687_100000519 384
45 3300026078 Ga0207702_10120445 Ga0207702_101204452 384
46 3300028800 Ga0265338_10032057 Ga0265338_100320573 384
47 3300041441 Ga0451787_791991 Ga0451787_791991_228_1433 384
48 3300048904 Ga0496101_0043407 Ga0496101_0043407_1430_2698 384
49 3300048919 Ga0496116_0000039 Ga0496116_0000039_11395_12612 384
50 3300048919 Ga0496116_0002279 Ga0496116_0002279_7215_8483 384
51 3300048920 Ga0496117_0080358 Ga0496117_0080358_505_1722 384
52 3300048921 Ga0496118_0010351 Ga0496118_0010351_3772_5040 384
53 3300005530 Ga0070679_100089641 Ga0070679_1000896412 385
54 3300025921 Ga0207652_10112442 Ga0207652_101124422 385
55 3300035090 Ga0373949_0000245 Ga0373949_0000245_11606_12994 385
56 3300047472 Ga0495686_0062390 Ga0495686_0062390_755_1957 385
57 3300048929 Ga0496126_0001292 Ga0496126_0001292_31324_32541 385
58 iso_pu_bacteria 2739367700 2739732208 385
59 iso_pu_bacteria 2884411467 2884413654 385
60 iso_pu_bacteria 2928963466 2928964893 385
61 3300003323 rootH1_10155098 rootH1_101550983 386
62 3300028556 Ga0265337_1001190 Ga0265337_10011909 386
63 3300031238 Ga0265332_10030739 Ga0265332_100307392 386
64 3300031240 Ga0265320_10018183 Ga0265320_100181832 386
65 3300031249 Ga0265339_10008130 Ga0265339_100081303 386
66 3300031344 Ga0265316_10000638 Ga0265316_1000063823 386
67 3300031711 Ga0265314_10000001 Ga0265314_1000000177 386
68 3300031711 Ga0265314_10089535 Ga0265314_100895352 386
69 3300031711 Ga0265314_10108880 Ga0265314_101088802 386
70 3300044735 Ga0466968_0021118 Ga0466968_0021118_1231_2466 386
71 3300044901 Ga0466960_0006109 Ga0466960_0006109_1709_2944 386
72 3300046517 Ga0495630_0017329 Ga0495630_0017329_3811_5040 386
73 3300003316 rootH1_10016616 rootH1_100166162 387
74 3300005437 Ga0070710_10018306 Ga0070710_100183064 387
75 3300006175 Ga0070712_100003720 Ga0070712_1000037203 387
76 3300025915 Ga0207693_10009516 Ga0207693_100095163 387
77 3300039450 Ga0436363_0451306 Ga0436363_0451306_491_1765 387
78 3300046507 Ga0495606_0009121 Ga0495606_0009121_4176_5393 387
79 3300005536 Ga0070697_100113035 Ga0070697_1001130353 388
80 3300005563 Ga0068855_100000018 Ga0068855_10000001867 388
81 3300006881 Ga0068865_100156901 Ga0068865_1001569012 388
82 3300009098 Ga0105245_10005737 Ga0105245_100057377 388
83 3300013104 Ga0157370_10178144 Ga0157370_101781441 388
84 3300025938 Ga0207704_10119145 Ga0207704_101191452 388
85 3300025949 Ga0207667_10000164 Ga0207667_1000016455 388
86 3300041486 Ga0451807_0060176 Ga0451807_0060176_425_1681 388
87 3300049586 Ga0501070_0031428 Ga0501070_0031428_2917_4152 388
88 3300053086 Ga0500578_0051361 Ga0500578_0051361_845_2134 388
89 3300054114 Ga0501084_0034534 Ga0501084_0034534_2870_4150 388
90 3300002737 JGI25162J39368_1000946 JGI25162J39368_10009462 389
91 3300003762 Ga0055542_1000340 Ga0055542_100034048 389
92 3300005340 Ga0070689_100028781 Ga0070689_1000287812 389
93 3300005344 Ga0070661_100078758 Ga0070661_1000787583 389
94 3300009551 Ga0105238_10065943 Ga0105238_100659434 389
95 3300013306 Ga0163162_10036016 Ga0163162_100360164 389
96 3300014969 Ga0157376_10033508 Ga0157376_100335082 389
97 3300025228 Ga0209672_100801 Ga0209672_1008019 389
98 3300025233 Ga0209437_100076 Ga0209437_100076248 389
99 3300025242 Ga0209258_103200 Ga0209258_1032003 389
100 3300025250 Ga0209026_1006689 Ga0209026_10066893 389
101 3300025254 Ga0209148_1000002 Ga0209148_10000021192 389
102 3300025272 Ga0209455_1004310 Ga0209455_10043102 389
103 3300025936 Ga0207670_10067496 Ga0207670_100674963 389
104 3300028380 Ga0268265_10093434 Ga0268265_100934342 389
105 3300037471 Ga0395905_0107830 Ga0395905_0107830_196_1518 389
106 3300046460 Ga0495638_0000288 Ga0495638_0000288_5624_6832 389
107 3300046507 Ga0495606_0000638 Ga0495606_0000638_23271_24479 389
108 3300046557 Ga0495622_0012282 Ga0495622_0012282_1053_2261 389
109 3300047472 Ga0495686_0002446 Ga0495686_0002446_5371_6669 389
110 3300048907 Ga0496104_0000146 Ga0496104_0000146_50037_51281 389
111 3300048908 Ga0496105_0000025 Ga0496105_0000025_128898_130142 389
112 3300048917 Ga0496114_0148087 Ga0496114_0148087_122_1330 389
113 3300048918 Ga0496115_0001149 Ga0496115_0001149_9509_10717 389
114 3300048918 Ga0496115_0020116 Ga0496115_0020116_1246_2454 389
115 3300048918 Ga0496115_0023968 Ga0496115_0023968_555_1763 389
116 3300048929 Ga0496126_0027626 Ga0496126_0027626_1824_3032 389

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10009

DUF2252

Uncharacterized protein conserved in bacteria (DUF2252)

10

397

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1e8w-assembly1.cif.gz_A structure determinants of phosphoinositide 3-kinase inhibition by wortmannin, ly294002, quercetin, myricetin and staurosporine 0.5038 223 298
3dpd-assembly1.cif.gz_A achieving multi-isoform pi3k inhibition in a series of substituted 3,4-dihydro-2h-benzo[1,4]oxazines 0.4999 223 298
5my8-assembly1.cif.gz_A crystal structure of srpk1 in complex with sphinx31 0.4876 237 299
5g2n-assembly1.cif.gz_A x-ray structure of pi3kinase gamma in complex with copanlisib 0.4789 223 298
3tl5-assembly1.cif.gz_A discovery of gdc-0980: a potent, selective, and orally available class i phosphatidylinositol 3-kinase (pi3k)/mammalian target of rapamycin (mtor) kinase inhibitor for the treatment of cancer 0.4684 223 298
ID Description Score Start End Superfamily
af_O61882_178_345_3.90.1200.10 Alpha Beta;Alpha-Beta Complex;Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2;Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.696 58 105 3.90.1200.10
af_Q20974_215_362_3.90.1200.10 Alpha Beta;Alpha-Beta Complex;Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2;Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.5967 36 105 3.90.1200.10
af_Q86KA9_210_381_1.10.510.10 Mainly Alpha;Orthogonal Bundle;Transferase(Phosphotransferase); domain 1;Transferase(Phosphotransferase) domain 1 0.5608 217 300 1.10.510.10
af_I1J8C1_13_123_3.30.200.20 Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1;Phosphorylase Kinase; domain 1 0.5514 237 299 3.30.200.20
af_Q7K0P0_1_158_3.30.200.20 Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1;Phosphorylase Kinase; domain 1 0.5514 188 299 3.30.200.20
ID Description Score Start End GO Terms
AF-A0A370X5H3-F1-model_v4 DUF2252 domain-containing protein 0.9733 10 388
AF-A0A7W5NL99-F1-model_v4 Uncharacterized protein (DUF2252 family) 0.9574 2 387
AF-I4MW79-F1-model_v4 DUF2252 domain-containing protein 0.955 8 388
AF-A0A4Q3S8I8-F1-model_v4 DUF2252 domain-containing protein 0.9516 1 387
AF-A0A7U0G2E8-F1-model_v4 deleted 0.9514 8 385

Feature Viewer

pLDDT pTM Quality
86.53 0.89 High
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Predicted Structure (AlphaFold2)

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