F068362

General Info

Members Datasets Scaffolds Average Seq Length
112 78 112 417

Family's Representative Sequence

Representative Sequence 3300006028|Ga0070717_10066733|Ga0070717_100667332
Length 476
Sequence VLAVRRRASEAVAPPQVDELQNQENPHDHPGRIFGDAMTPNPSARPFIRQRSNGPFWYGKWSRNGRPVVRALGRAWAESDGNGGWRLKRGRPPEGTLTEAQAAERMLGLVREHDADQTLLERDAEERRRRGVTFRELAGEYLRWLEEIKGAKPSTLRDHRLILAEPGTAYRRGSGVSRGRVMTALGDRPARELTTREIEDLLRSVASTGVASRTVNKVRQLVCAIFNYGMRPSTYGLPANPAAHADRRAEPARAVLAFYSPEQIEVLARSLATGAHRDRSRPALTDGEIDARAREDVQDAELVRVAAYAGLRRGELVALHWRDVDFAGHKLVIRRSLSGDIEVKSTKSRRVREVPLPDQAAVALERLSRRGEFTGPDDYVFCSRLGRRLDPSALRRRYERARTAAGLEPLRFHDLRHTYGSLLVAGGIDLVSVKAAMGHSRITTTERYLHARPAGELADRFTRALSGTVIPAAAAA

Samples

Sample ID Description Type Environment
1 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
2 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
5 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
6 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
7 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
8 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
9 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
10 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
11 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
12 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
13 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
14 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
15 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
19 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
20 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
21 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
22 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
23 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
24 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
25 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
26 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
27 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
28 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
29 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
30 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
31 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
32 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
33 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
34 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
35 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
36 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
37 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
38 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
39 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
40 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
41 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
42 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
43 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
44 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
45 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
46 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
47 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
48 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
49 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
50 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
51 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
52 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
53 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
54 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
55 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
56 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
57 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
58 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
59 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
60 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
61 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
62 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
63 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
64 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
65 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
66 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
68 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
69 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
70 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
72 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
73 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
74 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
75 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
76 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
77 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
78 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.79
Nodule 0
Rhizoplane 13.39
Rhizosphere 67.86
Stem 0
Stem Tuber 0
Unclassified 16.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068868_100011004 3300005338 Bacteria 6574
2 Ga0070668_100026853 3300005347 Bacteria 4371
3 Ga0070714_100019426 3300005435 Bacteria 5536
4 Ga0070713_100189210 3300005436 Bacteria 1854
5 Ga0070685_10150050 3300005466 Bacteria 1476
6 Ga0081455_10002736 3300005937 Bacteria 20805
7 Ga0081538_10000952 3300005981 Bacteria 31074
8 Ga0081538_10028541 3300005981 Bacteria 3835
9 Ga0070717_10009953 3300006028 Bacteria 7154
10 Ga0070717_10066733 3300006028 Bacteria 2993
11 Ga0070717_10100695 3300006028 Bacteria 2453
12 Ga0105245_10000026 3300009098 Bacteria 163660
13 Ga0105237_10001241 3300009545 Bacteria 34013
14 Ga0157376_10005104 3300014969 Bacteria 9150
15 Ga0213876_10005629 3300021384 Bacteria 6878
16 Ga0213876_10109347 3300021384 Bacteria 1467
17 Ga0213876_10135870 3300021384 Bacteria 1308
18 Ga0213875_10000150 3300021388 Bacteria 73975
19 Ga0213875_10003479 3300021388 Bacteria 8963
20 Ga0207671_10000770 3300025914 Bacteria 40613
21 Ga0207687_10000017 3300025927 Bacteria 237310
22 Ga0207664_10086470 3300025929 Bacteria 2561
23 Ga0207668_10005183 3300025972 Bacteria 7665
24 Ga0207674_10133100 3300026116 Bacteria 2449
25 Ga0265319_1000014 3300028563 Bacteria 177623
26 Ga0265338_10000185 3300028800 Bacteria 116333
27 Ga0265327_10004704 3300031251 Bacteria 11923
28 Ga0373937_0192903 3300036401 Bacteria 1914
29 Ga0436364_0169833 3300037853 Bacteria 83429
30 Ga0436364_0174073 3300037853 Bacteria 13644
31 Ga0436364_0249692 3300037853 Bacteria 1598
32 Ga0436364_0504990 3300037853 Bacteria 3843
33 Ga0436364_0606403 3300037853 Bacteria 4200
34 Ga0436364_0738192 3300037853 Bacteria 7932
35 Ga0436364_1118931 3300037853 Bacteria 16338
36 Ga0436365_0094735 3300039437 Bacteria 14452
37 Ga0436365_0222037 3300039437 Bacteria 2107
38 Ga0436365_1342327 3300039437 Bacteria 1334
39 Ga0436365_1662886 3300039437 Bacteria 3283
40 Ga0436363_0329785 3300039450 Bacteria 16276
41 Ga0436363_1111615 3300039450 Bacteria 1482
42 Ga0436362_0136769 3300039453 Bacteria 1698
43 Ga0436362_1211612 3300039453 Bacteria 2002
44 Ga0466969_0095193 3300044656 Bacteria 1407
45 Ga0466963_0005636 3300044694 Bacteria 7349
46 Ga0466971_0046110 3300044719 Bacteria 1959
47 Ga0466971_0080904 3300044719 Bacteria 1481
48 Ga0466958_0002704 3300045836 Bacteria 8993
49 Ga0466958_0054300 3300045836 Bacteria 2430
50 Ga0466967_0138163 3300045976 Bacteria 2268
51 Ga0495603_0000379 3300046455 Bacteria 24214
52 Ga0495629_0001048 3300046459 Bacteria 22105
53 Ga0495651_0087713 3300046462 Bacteria 2339
54 Ga0495582_0000890 3300046473 Bacteria 16579
55 Ga0495662_0008448 3300046476 Bacteria 5065
56 Ga0495608_0018285 3300046511 Bacteria 4837
57 Ga0495608_0034591 3300046511 Bacteria 3410
58 Ga0495620_0000041 3300046515 Bacteria 112605
59 Ga0495628_0030300 3300046516 Bacteria 4382
60 Ga0495652_0091592 3300046529 Bacteria 2485
61 Ga0495645_0004965 3300046543 Bacteria 9106
62 Ga0495625_0000117 3300046660 Bacteria 121901
63 Ga0495635_0000009 3300046663 Bacteria 259024
64 Ga0495635_0047119 3300046663 Bacteria 2974
65 Ga0495657_0024524 3300046675 Bacteria 4294
66 Ga0495599_0070749 3300046678 Bacteria 2177
67 Ga0495646_0014430 3300046680 Bacteria 5024
68 Ga0495658_0000827 3300046683 Bacteria 16579
69 Ga0495669_0000213 3300046684 Bacteria 35060
70 Ga0495613_0000003 3300046689 Bacteria 248826
71 Ga0495613_0000005 3300046689 Bacteria 222558
72 Ga0495613_0187752 3300046689 Bacteria 1462
73 Ga0495600_0026071 3300046809 Bacteria 3770
74 Ga0495674_0200612 3300047319 Bacteria 1655
75 Ga0495676_0168154 3300047321 Bacteria 1545
76 Ga0495680_0047937 3300047322 Bacteria 3358
77 Ga0496102_0000019 3300048905 Bacteria 264583
78 Ga0496103_0000059 3300048906 Bacteria 139196
79 Ga0496103_0090009 3300048906 Bacteria 1936
80 Ga0496104_0000234 3300048907 Bacteria 48908
81 Ga0496104_0024362 3300048907 Bacteria 5567
82 Ga0496105_0000351 3300048908 Bacteria 30325
83 Ga0496106_0007228 3300048909 Bacteria 8203
84 Ga0496107_0080537 3300048910 Bacteria 2375
85 Ga0496108_0000288 3300048911 Bacteria 43361
86 Ga0496108_0003704 3300048911 Bacteria 12253
87 Ga0496109_0000012 3300048912 Bacteria 229699
88 Ga0496109_0004235 3300048912 Bacteria 11976
89 Ga0496110_0106577 3300048913 Bacteria 2515
90 Ga0496111_0035101 3300048914 Bacteria 3583
91 Ga0496112_0009186 3300048915 Bacteria 8882
92 Ga0496121_0026783 3300048924 Bacteria 5417
93 Ga0501033_0029946 3300049570 Bacteria 4091
94 Ga0501070_0005313 3300049586 Bacteria 10987
95 Ga0501070_0086365 3300049586 Bacteria 2597
96 Ga0501070_0140431 3300049586 Bacteria 1994
97 Ga0501074_0013817 3300049590 Bacteria 5872
98 Ga0501083_0001557 3300049744 Bacteria 15672
99 Ga0501035_0048475 3300049822 Bacteria 3809
100 Ga0501044_0086128 3300049823 Bacteria 3174
101 Ga0495601_0000099 3300053077 Bacteria 47704
102 Ga0495601_0000185 3300053077 Bacteria 33092
103 Ga0495601_0003258 3300053077 Bacteria 9275
104 Ga0495601_0029072 3300053077 Unclassified 3426
105 Ga0495612_0000091 3300053078 Bacteria 39413
106 Ga0495655_0000009 3300053083 Bacteria 150662
107 Ga0495595_0020981 3300053084 Bacteria 2849
108 Ga0495619_0000042 3300053085 Bacteria 112453
109 Ga0495619_0006635 3300053085 Bacteria 7326
110 Ga0495619_0137660 3300053085 Bacteria 1680
111 Ga0500628_000022 3300053129 Bacteria 77990
112 Ga0500616_0000637 3300053153 Bacteria 42393

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049744 Ga0501083_0001557 Ga0501083_0001557_2402_3367 320
2 3300021384 Ga0213876_10135870 Ga0213876_101358702 325
3 3300037853 Ga0436364_1118931 Ga0436364_1118931_40_1020 325
4 3300039437 Ga0436365_1662886 Ga0436365_1662886_252_1232 325
5 3300046660 Ga0495625_0000117 Ga0495625_0000117_57767_58792 331
6 3300037853 Ga0436364_0738192 Ga0436364_0738192_4823_5950 355
7 3300048906 Ga0496103_0090009 Ga0496103_0090009_725_1888 359
8 3300021388 Ga0213875_10000150 Ga0213875_1000015062 362
9 3300037853 Ga0436364_0169833 Ga0436364_0169833_27741_28937 362
10 3300048924 Ga0496121_0026783 Ga0496121_0026783_1753_2916 362
11 3300021384 Ga0213876_10109347 Ga0213876_101093472 364
12 3300039437 Ga0436365_1342327 Ga0436365_1342327_99_1256 364
13 3300005981 Ga0081538_10000952 Ga0081538_1000095220 367
14 3300044719 Ga0466971_0080904 Ga0466971_0080904_213_1397 367
15 3300049586 Ga0501070_0086365 Ga0501070_0086365_184_1335 368
16 3300046511 Ga0495608_0018285 Ga0495608_0018285_256_1422 369
17 3300039453 Ga0436362_0136769 Ga0436362_0136769_306_1487 373
18 3300037853 Ga0436364_0249692 Ga0436364_0249692_96_1223 374
19 3300039450 Ga0436363_1111615 Ga0436363_1111615_321_1469 374
20 3300053077 Ga0495601_0003258 Ga0495601_0003258_672_1835 375
21 3300048907 Ga0496104_0000234 Ga0496104_0000234_37678_38841 377
22 3300048908 Ga0496105_0000351 Ga0496105_0000351_1622_2785 377
23 3300044656 Ga0466969_0095193 Ga0466969_0095193_94_1266 378
24 3300045836 Ga0466958_0002704 Ga0466958_0002704_10_1179 378
25 3300053085 Ga0495619_0137660 Ga0495619_0137660_429_1625 379
26 3300046543 Ga0495645_0004965 Ga0495645_0004965_4713_5903 381
27 3300046678 Ga0495599_0070749 Ga0495599_0070749_380_1534 383
28 3300005466 Ga0070685_10150050 Ga0070685_101500501 385
29 3300053083 Ga0495655_0000009 Ga0495655_0000009_66102_67271 387
30 3300053129 Ga0500628_000022 Ga0500628_000022_42943_44112 387
31 3300006028 Ga0070717_10100695 Ga0070717_101006954 388
32 3300046455 Ga0495603_0000379 Ga0495603_0000379_20131_21312 389
33 3300053085 Ga0495619_0000042 Ga0495619_0000042_97671_98873 389
34 3300037853 Ga0436364_0504990 Ga0436364_0504990_2067_3281 391
35 3300009545 Ga0105237_10001241 Ga0105237_1000124116 393
36 3300025914 Ga0207671_10000770 Ga0207671_1000077025 393
37 3300039450 Ga0436363_0329785 Ga0436363_0329785_13893_15119 394
38 3300048910 Ga0496107_0080537 Ga0496107_0080537_1001_2239 397
39 3300053153 Ga0500616_0000637 Ga0500616_0000637_20883_22163 400
40 3300044694 Ga0466963_0005636 Ga0466963_0005636_4475_5791 406
41 3300005981 Ga0081538_10028541 Ga0081538_100285414 412
42 3300053077 Ga0495601_0000185 Ga0495601_0000185_20874_22160 412
43 3300005937 Ga0081455_10002736 Ga0081455_1000273617 413
44 3300005347 Ga0070668_100026853 Ga0070668_1000268534 414
45 3300009098 Ga0105245_10000026 Ga0105245_10000026122 414
46 3300025927 Ga0207687_10000017 Ga0207687_1000001760 414
47 3300025972 Ga0207668_10005183 Ga0207668_100051834 414
48 3300028563 Ga0265319_1000014 Ga0265319_100001486 414
49 3300028800 Ga0265338_10000185 Ga0265338_1000018584 414
50 3300046459 Ga0495629_0001048 Ga0495629_0001048_8393_9670 414
51 3300046689 Ga0495613_0000005 Ga0495613_0000005_202280_203557 414
52 3300048911 Ga0496108_0000288 Ga0496108_0000288_22559_23836 414
53 3300048912 Ga0496109_0000012 Ga0496109_0000012_135178_136455 414
54 3300053085 Ga0495619_0006635 Ga0495619_0006635_4126_5403 414
55 3300047321 Ga0495676_0168154 Ga0495676_0168154_243_1523 415
56 3300053077 Ga0495601_0000099 Ga0495601_0000099_41992_43272 415
57 3300026116 Ga0207674_10133100 Ga0207674_101331003 417
58 3300046675 Ga0495657_0024524 Ga0495657_0024524_747_2051 417
59 3300048905 Ga0496102_0000019 Ga0496102_0000019_257350_258672 417
60 3300048906 Ga0496103_0000059 Ga0496103_0000059_5909_7231 417
61 3300053077 Ga0495601_0029072 Ga0495601_0029072_403_1704 419
62 3300021384 Ga0213876_10005629 Ga0213876_100056297 420
63 3300021388 Ga0213875_10003479 Ga0213875_100034792 420
64 3300037853 Ga0436364_0174073 Ga0436364_0174073_1177_2559 420
65 3300037853 Ga0436364_0606403 Ga0436364_0606403_2645_3949 420
66 3300039437 Ga0436365_0094735 Ga0436365_0094735_6143_7525 420
67 3300044719 Ga0466971_0046110 Ga0466971_0046110_352_1659 420
68 3300039437 Ga0436365_0222037 Ga0436365_0222037_680_1990 421
69 3300014969 Ga0157376_10005104 Ga0157376_100051042 422
70 3300045836 Ga0466958_0054300 Ga0466958_0054300_446_1759 422
71 3300045976 Ga0466967_0138163 Ga0466967_0138163_357_1649 422
72 3300005435 Ga0070714_100019426 Ga0070714_1000194265 424
73 3300005436 Ga0070713_100189210 Ga0070713_1001892101 424
74 3300006028 Ga0070717_10009953 Ga0070717_100099535 424
75 3300025929 Ga0207664_10086470 Ga0207664_100864702 424
76 3300053078 Ga0495612_0000091 Ga0495612_0000091_2410_3741 424
77 3300006028 Ga0070717_10066733 Ga0070717_100667332 425
78 3300036401 Ga0373937_0192903 Ga0373937_0192903_348_1673 425
79 3300039453 Ga0436362_1211612 Ga0436362_1211612_359_1681 425
80 3300046462 Ga0495651_0087713 Ga0495651_0087713_574_1899 425
81 3300046511 Ga0495608_0034591 Ga0495608_0034591_767_2092 425
82 3300046515 Ga0495620_0000041 Ga0495620_0000041_81648_82946 425
83 3300046516 Ga0495628_0030300 Ga0495628_0030300_2291_3616 425
84 3300046529 Ga0495652_0091592 Ga0495652_0091592_592_1917 425
85 3300046663 Ga0495635_0047119 Ga0495635_0047119_352_1677 425
86 3300046680 Ga0495646_0014430 Ga0495646_0014430_3151_4476 425
87 3300046689 Ga0495613_0187752 Ga0495613_0187752_15_1340 425
88 3300046809 Ga0495600_0026071 Ga0495600_0026071_1123_2448 425
89 3300047319 Ga0495674_0200612 Ga0495674_0200612_198_1523 425
90 3300047322 Ga0495680_0047937 Ga0495680_0047937_1306_2631 425
91 3300053084 Ga0495595_0020981 Ga0495595_0020981_1240_2568 425
92 3300048907 Ga0496104_0024362 Ga0496104_0024362_3426_4751 427
93 3300048909 Ga0496106_0007228 Ga0496106_0007228_5383_6708 427
94 3300048911 Ga0496108_0003704 Ga0496108_0003704_4147_5502 427
95 3300048912 Ga0496109_0004235 Ga0496109_0004235_1868_3193 427
96 3300048913 Ga0496110_0106577 Ga0496110_0106577_265_1590 427
97 3300048914 Ga0496111_0035101 Ga0496111_0035101_979_2304 427
98 3300048915 Ga0496112_0009186 Ga0496112_0009186_3690_5015 427
99 3300031251 Ga0265327_10004704 Ga0265327_100047047 428
100 3300049586 Ga0501070_0140431 Ga0501070_0140431_148_1479 428
101 3300049590 Ga0501074_0013817 Ga0501074_0013817_4033_5364 428
102 3300049823 Ga0501044_0086128 Ga0501044_0086128_271_1602 428
103 3300046476 Ga0495662_0008448 Ga0495662_0008448_3567_4904 430
104 3300049570 Ga0501033_0029946 Ga0501033_0029946_272_1600 430
105 3300049586 Ga0501070_0005313 Ga0501070_0005313_262_1590 430
106 3300049822 Ga0501035_0048475 Ga0501035_0048475_279_1607 430
107 3300046684 Ga0495669_0000213 Ga0495669_0000213_6787_8109 434
108 3300005338 Ga0068868_100011004 Ga0068868_1000110046 447
109 3300046473 Ga0495582_0000890 Ga0495582_0000890_8755_10101 447
110 3300046663 Ga0495635_0000009 Ga0495635_0000009_95807_97150 447
111 3300046683 Ga0495658_0000827 Ga0495658_0000827_8755_10101 447
112 3300046689 Ga0495613_0000003 Ga0495613_0000003_89835_91178 447

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00589

Phage_integrase

Phage integrase family

288

454

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
2kd1-assembly1.cif.gz_A solution nmr structure of the integrase-like domain from bacillus cereus ordered locus bc_1272. northeast structural genomics consortium target bcr268f 0.7874 105 228
3lys-assembly6.cif.gz_F crystal structure of the n-terminal domain of the prophage pi2 protein 01 (integrase) from lactococcus lactis, northeast structural genomics consortium target kr124f 0.7645 108 212
2kd1-assembly1.cif.gz_A solution nmr structure of the integrase-like domain from bacillus cereus ordered locus bc_1272. northeast structural genomics consortium target bcr268f 0.7641 105 228
2kj8-assembly1.cif.gz_A nmr structure of fragment 87-196 from the putative phage integrase ints of e. coli: northeast structural genomics consortium target er652a, psi-2 0.7511 108 210
1ae9-assembly1.cif.gz_A structure of the lambda integrase catalytic core 0.739 226 408
ID Description Score Start End Superfamily
af_P71298_266_454_1.10.443.10 Mainly Alpha;Orthogonal Bundle;hpI Integrase; Chain A;Intergrase catalytic core 0.832 220 435 1.10.443.10
af_P0A8P6_5_99_1.10.150.130 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.8223 112 210 1.10.150.130
af_P71298_266_454_1.10.443.10 Mainly Alpha;Orthogonal Bundle;hpI Integrase; Chain A;Intergrase catalytic core 0.808 220 435 1.10.443.10
af_Q57813_134_326_1.10.443.10 Mainly Alpha;Orthogonal Bundle;hpI Integrase; Chain A;Intergrase catalytic core 0.8 224 417 1.10.443.10
af_P75969_82_190_1.10.150.130 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.792 109 221 1.10.150.130
ID Description Score Start End GO Terms
AF-A0A7V9BFG4-F1-model_v4 Site-specific integrase 0.9018 107 419 GO:0003677
GO:0006310
GO:0015074
AF-A0A7V9BFG4-F1-model_v4 Site-specific integrase 0.8987 107 419 GO:0003677
GO:0006310
GO:0015074
AF-A0A7V9EDY7-F1-model_v4 Site-specific integrase 0.8937 226 435 GO:0003677
GO:0006310
GO:0015074
AF-A0A7Y3J3R3-F1-model_v4 Tyrosine-type recombinase/integrase 0.8787 265 433 GO:0003677
GO:0006310
GO:0015074
AF-A0A286TXE6-F1-model_v4 Integrase 0.87 106 410 GO:0003677
GO:0006310
GO:0015074

Feature Viewer

pLDDT pTM Quality
81.67 0.65 Medium
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Predicted Structure (AlphaFold2)

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