F045076
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 107 | 104 | 43 | 218 |
Family's Representative Sequence
| Representative Sequence | 3300046531|Ga0495665_0069573|Ga0495665_0069573_707_1435 |
| Length | 242 |
| Sequence | VSLRAHNITVGHTPGYSLLTDIDLTIPAGSVVGLTGPSGSGKTTLARVLAGLHLPSAGAVTVDGEPLTPPSRLRGRRQRSIAMLFPSPRQATSPRWTLERIIAEPLAVTGTPADQRARTVHTTALRVGLTADLLQRQPHQVSDGQLQRACLARALIQRPRYLICDEMTAMLDPATTAALVHVLIEEADAALGILAVSHDHQLLHAWADTVIDLPELVPRADSRSRCEYPASPALPAQSTHWR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2501939600 | Micromonospora sp. L5 | Isolate | Unclassified |
| 2 | 2547132111 | Streptomyces sp. TOR3209 | Isolate | Rhizosphere |
| 3 | 2554235005 | Streptomyces violaceusniger SPC6 | Isolate | Rhizosphere |
| 4 | 2582580736 | Prauserella sp. Am3 | Isolate | Unclassified |
| 5 | 2616644941 | Streptomyces atratus OK807 | Isolate | Rhizosphere |
| 6 | 2643221548 | Streptomyces sp. Root55 | Isolate | Unclassified |
| 7 | 2643221578 | Streptomyces sp. Root63 | Isolate | Unclassified |
| 8 | 2643221587 | Streptomyces sp. Root66D1 | Isolate | Unclassified |
| 9 | 2643221673 | Streptomyces sp. Root1295 | Isolate | Unclassified |
| 10 | 2643221677 | Streptomyces sp. Root1304 | Isolate | Unclassified |
| 11 | 2643221715 | Mycobacterium sp. Root265 | Isolate | Unclassified |
| 12 | 2738543005 | Rhodococcus sp. OK519 | Isolate | Unclassified |
| 13 | 2784132148 | Streptomyces sp. E5N91 SAI-083 | Isolate | Unclassified |
| 14 | 2802429296 | Streptomyces sampsonii KJ40 | Isolate | Rhizosphere |
| 15 | 2808606448 | Streptomyces sp. 193411 | Isolate | Unclassified |
| 16 | 2811994917 | Streptomyces sp. SLBN-134 | Isolate | Unclassified |
| 17 | 2816332139 | Pseudonocardia kunmingensis DSM 45301 | Isolate | Unclassified |
| 18 | 2837183177 | Egibacter rhizosphaerae EGI 80759 | Isolate | Unclassified |
| 19 | 2855670206 | Micromonospora noduli Lupac 07 | Isolate | Nodule |
| 20 | 2855676851 | Micromonospora saelicesensis GAR05 | Isolate | Unclassified |
| 21 | 2856858025 | Micromonospora aurantiaca 110B(2018) | Isolate | Unclassified |
| 22 | 2857288857 | Micromonospora noduli ONO23 | Isolate | Unclassified |
| 23 | 2858848962 | Micromonospora saelicesensis GAR06 | Isolate | Unclassified |
| 24 | 2858868258 | Micromonospora sp. MH33 | Isolate | Unclassified |
| 25 | 2858882152 | Micromonospora noduli MED15 | Isolate | Nodule |
| 26 | 2858888857 | Micromonospora saelicesensis Lupac 06 | Isolate | Unclassified |
| 27 | 2858895516 | Micromonospora saelicesensis PSN13 | Isolate | Unclassified |
| 28 | 2862178590 | Streptomyces sp. SDr-06 | Isolate | Rhizosphere |
| 29 | 2862290372 | Streptomyces triticagri NEAU-YY421 | Isolate | Rhizosphere |
| 30 | 2862382967 | Streptomyces scabiei NRRL B-2795 | Isolate | Nodule |
| 31 | 2862507626 | Streptomyces sp. NWU339 | Isolate | Unclassified |
| 32 | 2866552031 | Saccharopolyspora rhizosphaerae H219 | Isolate | Unclassified |
| 33 | 2867312974 | Micromonospora musae NGC1-4 | Isolate | Unclassified |
| 34 | 2867319477 | Micromonospora musae MS1-9 | Isolate | Unclassified |
| 35 | 2867507094 | Micromonospora zingiberis PLAI 1-1 | Isolate | Unclassified |
| 36 | 2869048445 | Micromonospora saelicesensis PSN01 | Isolate | Unclassified |
| 37 | 2869061728 | Micromonospora noduli ONO86 | Isolate | Unclassified |
| 38 | 2869068681 | Micromonospora noduli GUI43 | Isolate | Unclassified |
| 39 | 2875391855 | Streptomyces cavourensis 1AS2a | Isolate | Rhizosphere |
| 40 | 2877676314 | Streptomyces griseorubiginosus 3E-1 | Isolate | Unclassified |
| 41 | 2880489317 | Micromonospora ureilytica DSM 101692 | Isolate | Unclassified |
| 42 | 2902810491 | Mycolicibacterium sp. P9-22 | Isolate | Unclassified |
| 43 | 2912715099 | Streptomyces sp. Z423-1 | Isolate | Rhizosphere |
| 44 | 2912757875 | Streptomyces sp. S4.7 | Isolate | Rhizosphere |
| 45 | 2918501144 | Streptomyces sp. PvR006 | Isolate | Rhizosphere |
| 46 | 2928142448 | Prescottella equi DPS 2018 | Isolate | Unclassified |
| 47 | 2956939328 | Lolliginicoccus suaedae LNNU 331112 | Isolate | Rhizosphere |
| 48 | 2966598605 | Kitasatospora papulosa SLBN-177 | Isolate | Rhizosphere |
| 49 | 3001119090 | Lolliginicoccus lacisalsi G463 | Isolate | Rhizosphere |
| 50 | 3006425503 | Streptomyces zingiberis PLAI1-29 | Isolate | Unclassified |
| 51 | 3006493962 | Streptomyces grisecoloratus TRM S81-3 | Isolate | Rhizosphere |
| 52 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 53 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 54 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 55 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 57 | 3300041410 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 | Metagenome | Rhizosphere |
| 58 | 3300041413 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 | Metagenome | Rhizosphere |
| 59 | 3300041997 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 | Metagenome | Rhizosphere |
| 60 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 61 | 3300042156 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 | Metagenome | Rhizosphere |
| 62 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 63 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 64 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 65 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 66 | 3300046452 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere | Metagenome | Rhizosphere |
| 67 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 68 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 69 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 70 | 3300046648 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300047447 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 75 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 76 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 77 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 78 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 79 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 80 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 81 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 82 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 83 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 84 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 85 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 86 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 87 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 88 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 89 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 90 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 91 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 92 | 649633069 | Micromonospora sp. L5 | Isolate | Unclassified |
| 93 | 8008558824 | Streptomyces scabiei NRRL B-2795 | Isolate | Nodule |
| 94 | 8023623736 | Streptomyces sp. 111WW2 | Isolate | Unclassified |
| 95 | 8025413630 | Streptomyces sp. CAI-17 | Isolate | Rhizosphere |
| 96 | 8025478263 | Streptomyces telluris AA8 | Isolate | Rhizosphere |
| 97 | 8025530807 | Streptomyces sp. 4R-3d | Isolate | Unclassified |
| 98 | 8047710418 | Umezawaea endophytica DSM 103496 | Isolate | Unclassified |
| 99 | 8054704163 | Micromonospora trifolii NIE79 | Isolate | Nodule |
| 100 | 8054727385 | Micromonospora alfalfae MED01 | Isolate | Nodule |
| 101 | 8054734606 | Micromonospora hortensis NIE111 | Isolate | Nodule |
| 102 | 8056207758 | Saccharopolyspora indica KCTC 29208 | Isolate | Rhizosphere |
| 103 | 8056447290 | Streptomyces huiliensis SCA2-4 | Isolate | Rhizosphere |
| 104 | 8056667051 | Streptomyces sichuanensis SCA3-4 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 40.19 |
| Metatranscriptomes | 0 |
| Isolates | 59.81 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 3.74 |
| Nodule | 6.54 |
| Rhizoplane | 0 |
| Rhizosphere | 54.21 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 35.51 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070667_100000595 | 3300005367 | Bacteria | 35348 |
| 2 | Ga0068853_100442014 | 3300005539 | Bacteria | 1222 |
| 3 | Ga0075364_10187893 | 3300006051 | Bacteria | 1399 |
| 4 | Ga0207658_10003062 | 3300025986 | Bacteria | 11967 |
| 5 | Ga0307415_100255179 | 3300032126 | Bacteria | 1427 |
| 6 | Ga0439461_0000532 | 3300041410 | Bacteria | 5520 |
| 7 | Ga0439465_0117691 | 3300041413 | Bacteria | 929 |
| 8 | Ga0439431_0000332 | 3300041997 | Bacteria | 9833 |
| 9 | Ga0439449_0001811 | 3300042007 | Bacteria | 8408 |
| 10 | Ga0439446_0112746 | 3300042156 | Bacteria | 869 |
| 11 | Ga0466966_0518404 | 3300044684 | Bacteria | 717 |
| 12 | Ga0466968_0357337 | 3300044735 | Bacteria | 710 |
| 13 | Ga0466970_0003430 | 3300044765 | Bacteria | 7716 |
| 14 | Ga0466967_0000068 | 3300045976 | Bacteria | 37810 |
| 15 | Ga0495617_046553 | 3300046452 | Bacteria | 1445 |
| 16 | Ga0495585_0174642 | 3300046492 | Bacteria | 1107 |
| 17 | Ga0495583_0013939 | 3300046506 | Bacteria | 4456 |
| 18 | Ga0495665_0069573 | 3300046531 | Bacteria | 1855 |
| 19 | Ga0495611_0000063 | 3300046648 | Bacteria | 75207 |
| 20 | Ga0495604_0139445 | 3300047317 | Bacteria | 1734 |
| 21 | Ga0495683_0065562 | 3300047323 | Bacteria | 1791 |
| 22 | Ga0495685_037766 | 3300047447 | Bacteria | 1655 |
| 23 | Ga0501032_0118630 | 3300049569 | Bacteria | 1749 |
| 24 | Ga0501034_0113979 | 3300049571 | Bacteria | 2692 |
| 25 | Ga0501036_0131778 | 3300049572 | Bacteria | 2110 |
| 26 | Ga0501037_0000190 | 3300049573 | Bacteria | 56966 |
| 27 | Ga0501038_0015799 | 3300049574 | Bacteria | 6859 |
| 28 | Ga0501039_0010473 | 3300049575 | Bacteria | 7065 |
| 29 | Ga0501043_0001031 | 3300049579 | Bacteria | 24463 |
| 30 | Ga0501046_0025573 | 3300049580 | Bacteria | 4831 |
| 31 | Ga0501047_0152154 | 3300049581 | Bacteria | 2189 |
| 32 | Ga0501067_0154436 | 3300049583 | Bacteria | 1278 |
| 33 | Ga0501070_0503000 | 3300049586 | Bacteria | 973 |
| 34 | Ga0501072_0640433 | 3300049588 | Bacteria | 837 |
| 35 | Ga0501073_0105016 | 3300049589 | Bacteria | 1960 |
| 36 | Ga0501077_0043348 | 3300049593 | Bacteria | 2860 |
| 37 | Ga0501035_0304939 | 3300049822 | Bacteria | 1341 |
| 38 | Ga0501035_0613478 | 3300049822 | Bacteria | 885 |
| 39 | Ga0501044_0019352 | 3300049823 | Bacteria | 7285 |
| 40 | Ga0501044_0257256 | 3300049823 | Bacteria | 1685 |
| 41 | nmdc:mga03n38_186473_c1 | 3300050490 | Bacteria | 1066 |
| 42 | nmdc:mga00v17_14877_c1 | 3300050491 | Bacteria | 4353 |
| 43 | nmdc:mga00v17_211878_c1 | 3300050491 | Bacteria | 1254 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300049822 | Ga0501035_0613478 | Ga0501035_0613478_73_732 | 185 |
| 2 | 3300044684 | Ga0466966_0518404 | Ga0466966_0518404_80_703 | 192 |
| 3 | 3300049583 | Ga0501067_0154436 | Ga0501067_0154436_682_1263 | 193 |
| 4 | iso_pu_bacteria | 2582580736 | 2583150173 | 195 |
| 5 | iso_pu_bacteria | 2643221715 | 2644638924 | 198 |
| 6 | iso_pu_bacteria | 2862382967 | 2862383011 | 198 |
| 7 | iso_pu_bacteria | 8008558824 | 8008560407 | 198 |
| 8 | iso_pu_bacteria | 2902810491 | 2902814048 | 199 |
| 9 | iso_pu_bacteria | 8056207758 | 8056212362 | 199 |
| 10 | 3300044735 | Ga0466968_0357337 | Ga0466968_0357337_25_669 | 200 |
| 11 | 3300045976 | Ga0466967_0000068 | Ga0466967_0000068_13661_14305 | 200 |
| 12 | iso_pu_bacteria | 2862178590 | 2862185885 | 200 |
| 13 | 3300006051 | Ga0075364_10187893 | Ga0075364_101878932 | 201 |
| 14 | iso_pu_bacteria | 2816332139 | 2816509360 | 201 |
| 15 | iso_pu_bacteria | 2867507094 | 2867511495 | 201 |
| 16 | iso_pu_bacteria | 2877676314 | 2877682184 | 201 |
| 17 | iso_pu_bacteria | 2912757875 | 2912764560 | 201 |
| 18 | iso_pu_bacteria | 2956939328 | 2956939839 | 201 |
| 19 | iso_pu_bacteria | 3001119090 | 3001121258 | 201 |
| 20 | iso_pu_bacteria | 8025530807 | 8025536042 | 201 |
| 21 | 3300050491 | nmdc:mga00v17_14877_c1 | nmdc:mga00v17_14877_c1_1336_1944 | 202 |
| 22 | 3300050491 | nmdc:mga00v17_211878_c1 | nmdc:mga00v17_211878_c1_54_662 | 202 |
| 23 | iso_pu_bacteria | 2643221587 | 2643943102 | 202 |
| 24 | iso_pu_bacteria | 2643221677 | 2644430562 | 202 |
| 25 | iso_pu_bacteria | 2858868258 | 2858868337 | 202 |
| 26 | 3300005539 | Ga0068853_100442014 | Ga0068853_1004420141 | 203 |
| 27 | 3300041410 | Ga0439461_0000532 | Ga0439461_0000532_1559_2179 | 203 |
| 28 | 3300041413 | Ga0439465_0117691 | Ga0439465_0117691_204_824 | 203 |
| 29 | 3300041997 | Ga0439431_0000332 | Ga0439431_0000332_3804_4424 | 203 |
| 30 | 3300042007 | Ga0439449_0001811 | Ga0439449_0001811_3805_4461 | 203 |
| 31 | 3300042156 | Ga0439446_0112746 | Ga0439446_0112746_113_724 | 203 |
| 32 | 3300049569 | Ga0501032_0118630 | Ga0501032_0118630_936_1553 | 203 |
| 33 | 3300049571 | Ga0501034_0113979 | Ga0501034_0113979_1907_2524 | 203 |
| 34 | 3300049572 | Ga0501036_0131778 | Ga0501036_0131778_1344_1961 | 203 |
| 35 | 3300049573 | Ga0501037_0000190 | Ga0501037_0000190_185_802 | 203 |
| 36 | 3300049574 | Ga0501038_0015799 | Ga0501038_0015799_6046_6663 | 203 |
| 37 | 3300049575 | Ga0501039_0010473 | Ga0501039_0010473_197_814 | 203 |
| 38 | 3300049579 | Ga0501043_0001031 | Ga0501043_0001031_17595_18212 | 203 |
| 39 | 3300049586 | Ga0501070_0503000 | Ga0501070_0503000_172_789 | 203 |
| 40 | 3300049588 | Ga0501072_0640433 | Ga0501072_0640433_37_654 | 203 |
| 41 | 3300049589 | Ga0501073_0105016 | Ga0501073_0105016_538_1155 | 203 |
| 42 | 3300049593 | Ga0501077_0043348 | Ga0501077_0043348_829_1446 | 203 |
| 43 | 3300049823 | Ga0501044_0019352 | Ga0501044_0019352_3149_3766 | 203 |
| 44 | iso_pu_bacteria | 2501939600 | 2501945689 | 203 |
| 45 | iso_pu_bacteria | 2547132111 | 2547410272 | 203 |
| 46 | iso_pu_bacteria | 2554235005 | 2554261114 | 203 |
| 47 | iso_pu_bacteria | 2616644941 | 2616903539 | 203 |
| 48 | iso_pu_bacteria | 2643221548 | 2643761101 | 203 |
| 49 | iso_pu_bacteria | 2643221578 | 2643901094 | 203 |
| 50 | iso_pu_bacteria | 2643221673 | 2644407238 | 203 |
| 51 | iso_pu_bacteria | 2738543005 | 2739207018 | 203 |
| 52 | iso_pu_bacteria | 2784132148 | 2784591616 | 203 |
| 53 | iso_pu_bacteria | 2802429296 | 2804843229 | 203 |
| 54 | iso_pu_bacteria | 2808606448 | 2809235247 | 203 |
| 55 | iso_pu_bacteria | 2811994917 | 2812478105 | 203 |
| 56 | iso_pu_bacteria | 2837183177 | 2837185321 | 203 |
| 57 | iso_pu_bacteria | 2856858025 | 2856860269 | 203 |
| 58 | iso_pu_bacteria | 2862290372 | 2862293316 | 203 |
| 59 | iso_pu_bacteria | 2862507626 | 2862514684 | 203 |
| 60 | iso_pu_bacteria | 2875391855 | 2875398282 | 203 |
| 61 | iso_pu_bacteria | 2912715099 | 2912723446 | 203 |
| 62 | iso_pu_bacteria | 2918501144 | 2918508122 | 203 |
| 63 | iso_pu_bacteria | 2966598605 | 2966605403 | 203 |
| 64 | iso_pu_bacteria | 3006425503 | 3006428301 | 203 |
| 65 | iso_pu_bacteria | 3006493962 | 3006494190 | 203 |
| 66 | iso_pu_bacteria | 649633069 | 649810971 | 203 |
| 67 | iso_pu_bacteria | 8023623736 | 8023626156 | 203 |
| 68 | iso_pu_bacteria | 8025413630 | 8025416593 | 203 |
| 69 | iso_pu_bacteria | 8025478263 | 8025485288 | 203 |
| 70 | iso_pu_bacteria | 8056447290 | 8056454309 | 203 |
| 71 | iso_pu_bacteria | 8056667051 | 8056670368 | 203 |
| 72 | 3300047317 | Ga0495604_0139445 | Ga0495604_0139445_466_1125 | 204 |
| 73 | iso_pu_bacteria | 2866552031 | 2866552461 | 204 |
| 74 | iso_pu_bacteria | 2928142448 | 2928143982 | 204 |
| 75 | 3300032126 | Ga0307415_100255179 | Ga0307415_1002551792 | 206 |
| 76 | 3300044765 | Ga0466970_0003430 | Ga0466970_0003430_2016_2693 | 207 |
| 77 | 3300046452 | Ga0495617_046553 | Ga0495617_046553_408_1088 | 207 |
| 78 | 3300046492 | Ga0495585_0174642 | Ga0495585_0174642_59_739 | 207 |
| 79 | 3300046506 | Ga0495583_0013939 | Ga0495583_0013939_122_802 | 207 |
| 80 | 3300046648 | Ga0495611_0000063 | Ga0495611_0000063_61562_62242 | 207 |
| 81 | 3300047323 | Ga0495683_0065562 | Ga0495683_0065562_213_893 | 207 |
| 82 | 3300047447 | Ga0495685_037766 | Ga0495685_037766_398_1078 | 207 |
| 83 | 3300049580 | Ga0501046_0025573 | Ga0501046_0025573_3375_4046 | 207 |
| 84 | 3300049581 | Ga0501047_0152154 | Ga0501047_0152154_1291_1962 | 207 |
| 85 | 3300049822 | Ga0501035_0304939 | Ga0501035_0304939_175_846 | 207 |
| 86 | iso_pu_bacteria | 2855670206 | 2855675139 | 207 |
| 87 | iso_pu_bacteria | 2855676851 | 2855681176 | 207 |
| 88 | iso_pu_bacteria | 2857288857 | 2857294082 | 207 |
| 89 | iso_pu_bacteria | 2858848962 | 2858851758 | 207 |
| 90 | iso_pu_bacteria | 2858882152 | 2858882744 | 207 |
| 91 | iso_pu_bacteria | 2858888857 | 2858894918 | 207 |
| 92 | iso_pu_bacteria | 2858895516 | 2858899926 | 207 |
| 93 | iso_pu_bacteria | 2869048445 | 2869048495 | 207 |
| 94 | iso_pu_bacteria | 2869061728 | 2869066269 | 207 |
| 95 | iso_pu_bacteria | 2869068681 | 2869073097 | 207 |
| 96 | iso_pu_bacteria | 2880489317 | 2880490645 | 207 |
| 97 | iso_pu_bacteria | 8047710418 | 8047714734 | 207 |
| 98 | iso_pu_bacteria | 8054704163 | 8054705620 | 207 |
| 99 | iso_pu_bacteria | 8054727385 | 8054733912 | 207 |
| 100 | iso_pu_bacteria | 8054734606 | 8054735508 | 207 |
| 101 | 3300046531 | Ga0495665_0069573 | Ga0495665_0069573_707_1435 | 208 |
| 102 | iso_pu_bacteria | 2867312974 | 2867314268 | 208 |
| 103 | iso_pu_bacteria | 2867319477 | 2867321572 | 208 |
| 104 | 3300005367 | Ga0070667_100000595 | Ga0070667_10000059519 | 209 |
| 105 | 3300025986 | Ga0207658_10003062 | Ga0207658_100030626 | 209 |
| 106 | 3300049823 | Ga0501044_0257256 | Ga0501044_0257256_887_1567 | 209 |
| 107 | 3300050490 | nmdc:mga03n38_186473_c1 | nmdc:mga03n38_186473_c1_255_890 | 209 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7z16-assembly1.cif.gz_J | e. coli c-p lyase bound to phnk/phnl dual abc dimer with amppnp and phnk e171q mutation | 0.9336 | 1 | 201 |
| 6cvl-assembly1.cif.gz_D | crystal structure of the escherichia coli atpgs-bound metni methionine abc transporter in complex with its metq binding protein | 0.9263 | 3 | 200 |
| 3pux-assembly1.cif.gz_B | crystal structure of an outward-facing mbp-maltose transporter complex bound to adp-bef3 | 0.9245 | 3 | 200 |
| 2r6g-assembly1.cif.gz_A | the crystal structure of the e. coli maltose transporter | 0.9244 | 3 | 200 |
| 3rlf-assembly1.cif.gz_B | crystal structure of the maltose-binding protein/maltose transporter complex in an outward-facing conformation bound to mgamppnp | 0.9229 | 4 | 200 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A1D6Q2V7_231_304_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9403 | 2 | 67 | 3.40.50.300 |
| af_Q9C9W0_25_262_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9334 | 2 | 200 | 3.40.50.300 |
| af_O33189_10_251_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9272 | 1 | 200 | 3.40.50.300 |
| af_P77279_1_223_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9263 | 1 | 203 | 3.40.50.300 |
| af_P0A9U1_321_563_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9209 | 1 | 200 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-G7CHL2-F1-model_v4 | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component | 0.9849 | 4 | 200 |
GO:0005524
GO:0016887 GO:0055085 |
| AF-A0A0N0CE67-F1-model_v4 | deleted | 0.9707 | 10 | 203 |
|
| AF-A0A0N0CE67-F1-model_v4 | deleted | 0.961 | 10 | 203 |
|
| AF-G7CHL2-F1-model_v4 | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component | 0.956 | 4 | 200 |
GO:0005524
GO:0016887 GO:0055085 |
| AF-A0A2W6T1U8-F1-model_v4 | deleted | 0.9503 | 3 | 200 |
|
Predicted Structure (AlphaFold2)
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