F005905

General Info

Members Datasets Scaffolds Average Seq Length
100 84 66 513

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221649|2644278496
Length 562
Sequence LNPAAIALLRADLDEARYSEASLDGLWGPDAAAALRRNERVPALRALAALRARLGAPTAVATLAELFVLGMPVGRADLQAALPRLGVDGARALGLVGPAEEQPASDGQSETLRALLELRPYGFNDSRGGGAWWILSDLGELALGGPLGENHVLGVGGASRTLSGLMLQNEARSVLDLGTGCGIQAMHAARHARRVVATDISRRALELAAFNAELNEIDGIEFRFGSLFEPVAGERFDHIISNPPFVITPRVEGVPAYEYRDGGMVGDALVEQVVRDAAAHLTPGGVLQMLGNWEYTEAVPDAFDRLRSWLEPRGGAAEAGAALDYWIVEREAQSATQYAETWIRDGGTRPGTPDFDRLFGAWLDDFAERGVTQIGFGYVLLRAPADDFDKLNQRDSPLVEPLPLVEPLPLVDPLPLVEPVETPRLERLERLHAPLGDNEWGLGVHLGNCLAARDWQAAQPDAELAAQCLSVAGDVTEERHYWPGHDDPTELLLRQGGGFARTISPGTALAALVGASDGELSVGAIAAALAQLLEVDEAALRAELVDGARRLLDDGILLPPGA

Samples

Sample ID Description Type Environment
1 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
2 2643221616 Leifsonia sp. Root227 Isolate Unclassified
3 2643221619 Agromyces sp. Root81 Isolate Unclassified
4 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
5 2643221649 Leifsonia sp. Root4 Isolate Unclassified
6 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
7 2808606372 Agromyces sp. 23-23 Isolate Unclassified
8 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
9 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
10 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
11 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
12 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
13 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
14 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
15 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
16 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
17 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
18 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
19 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
20 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
21 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
22 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
23 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
24 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
25 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
26 2928153084 Leifsonia sp. 563 Isolate Unclassified
27 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
28 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
29 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
30 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
31 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
32 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
33 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
34 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
35 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
36 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
37 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
38 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
39 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
40 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
41 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
42 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
43 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
44 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
53 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
54 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
57 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
60 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
61 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
62 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
63 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
64 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
65 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
66 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
67 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
68 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
69 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
70 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
71 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
72 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
73 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
74 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
75 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
76 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
77 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
78 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
79 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
80 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
81 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
82 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
83 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
84 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 64
Metatranscriptomes 2
Isolates 34

Biome Distribution

Category Percentage (%)
Aerial Root 1
Bulb 0
Endosphere 32
Nodule 0
Rhizoplane 5
Rhizosphere 34
Stem 0
Stem Tuber 1
Unclassified 27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25164J39214_1000786 3300002772 Bacteria 11449
2 JGI25165J46597_1000004 3300003214 Bacteria 667510
3 rootH1_10059393 3300003323 Bacteria 5435
4 Ga0006562J51391_1169944 3300003578 Bacteria 5316
5 Ga0006562J51391_1169945 3300003578 Bacteria 5170
6 Ga0055539_1000005 3300003752 Bacteria 609598
7 Ga0055533_1000001 3300003756 Bacteria 1863437
8 Ga0055525_1000121 3300003759 Bacteria 119321
9 Ga0055527_1000023 3300003760 Bacteria 204513
10 Ga0055542_1000023 3300003762 Bacteria 292964
11 Ga0055529_1000180 3300003763 Bacteria 86768
12 Ga0070658_10002201 3300005327 Bacteria 16376
13 Ga0157369_10004709 3300013105 Bacteria 16041
14 Ga0157369_10008012 3300013105 Bacteria 12132
15 Ga0157375_10148354 3300013308 Bacteria 2478
16 Ga0209566_100065 3300025225 Bacteria 190999
17 Ga0209674_100001 3300025226 Bacteria 4013750
18 Ga0209672_100064 3300025228 Bacteria 204609
19 Ga0209147_100965 3300025229 Bacteria 12606
20 Ga0209563_100001 3300025230 Bacteria 4013775
21 Ga0209563_100201 3300025230 Bacteria 32234
22 Ga0207427_100010 3300025231 Bacteria 648610
23 Ga0209437_101254 3300025233 Bacteria 7022
24 Ga0209677_100001 3300025253 Bacteria 4013787
25 Ga0209677_101445 3300025253 Bacteria 10272
26 Ga0209148_1000108 3300025254 Bacteria 204609
27 Ga0209233_1000001 3300025261 Bacteria 2992747
28 Ga0209455_1000102 3300025272 Bacteria 204609
29 Ga0207705_10000213 3300025909 Bacteria 58174
30 Ga0307409_100086808 3300031995 Bacteria 2548
31 Ga0395899_0002856 3300037312 Bacteria 13899
32 Ga0395899_0010946 3300037312 Bacteria 6951
33 Ga0395900_0075201 3300037418 Bacteria 3472
34 Ga0395898_0001209 3300037466 Bacteria 39094
35 Ga0451793_0203174 3300041452 Bacteria 2645
36 Ga0466961_0020661 3300044693 Bacteria 4237
37 Ga0466970_0006370 3300044765 Bacteria 5897
38 Ga0496105_0043723 3300048908 Bacteria 3695
39 Ga0496105_0093531 3300048908 Bacteria 2483
40 Ga0496114_0060862 3300048917 Bacteria 3156
41 Ga0496115_0006983 3300048918 Bacteria 8292
42 Ga0496117_0001332 3300048920 Bacteria 36331
43 Ga0496117_0011088 3300048920 Bacteria 8108
44 Ga0496117_0015916 3300048920 Bacteria 6372
45 Ga0496118_0001945 3300048921 Bacteria 29253
46 Ga0496118_0010551 3300048921 Bacteria 9135
47 Ga0496122_0003784 3300048925 Bacteria 19500
48 Ga0496122_0007084 3300048925 Bacteria 12597
49 Ga0496123_0004085 3300048926 Bacteria 15707
50 Ga0496123_0020594 3300048926 Bacteria 5155
51 Ga0496124_0000209 3300048927 Bacteria 114633
52 Ga0496124_0005390 3300048927 Bacteria 14440
53 Ga0496126_0014293 3300048929 Bacteria 8031
54 Ga0501070_0000063 3300049586 Bacteria 92104
55 Ga0501035_0194356 3300049822 Bacteria 1743
56 Ga0500635_0000179 3300053080 Bacteria 32628
57 Ga0500643_000072 3300053087 Bacteria 112810
58 Ga0500556_0000001 3300053104 Bacteria 1135060
59 Ga0500559_0000151 3300053136 Bacteria 54813
60 Ga0500559_0002209 3300053136 Bacteria 10282
61 Ga0500568_0000006 3300053139 Bacteria 522235
62 Ga0500573_0000192 3300053140 Bacteria 24925
63 Ga0500573_0001466 3300053140 Bacteria 11318
64 Ga0500573_0002863 3300053140 Bacteria 8767
65 Ga0500573_0017798 3300053140 Bacteria 4048
66 Ga0500616_0000113 3300053153 Bacteria 150722

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049822 Ga0501035_0194356 Ga0501035_0194356_278_1720 459
2 3300048927 Ga0496124_0005390 Ga0496124_0005390_7194_8774 465
3 3300048925 Ga0496122_0007084 Ga0496122_0007084_7680_9173 476
4 3300048926 Ga0496123_0004085 Ga0496123_0004085_4483_5976 476
5 3300053140 Ga0500573_0002863 Ga0500573_0002863_15_1574 479
6 3300053136 Ga0500559_0000151 Ga0500559_0000151_8472_10019 480
7 3300048920 Ga0496117_0001332 Ga0496117_0001332_12906_14501 481
8 iso_pu_bacteria 2852643534 2852645870 481
9 3300003760 Ga0055527_1000023 Ga0055527_100002355 483
10 3300003762 Ga0055542_1000023 Ga0055542_1000023223 483
11 3300003763 Ga0055529_1000180 Ga0055529_100018025 483
12 3300025228 Ga0209672_100064 Ga0209672_10006456 483
13 3300025229 Ga0209147_100965 Ga0209147_10096514 483
14 3300025254 Ga0209148_1000108 Ga0209148_100010856 483
15 3300025272 Ga0209455_1000102 Ga0209455_1000102133 483
16 iso_pu_bacteria 2857733635 2857733830 484
17 3300048929 Ga0496126_0014293 Ga0496126_0014293_4095_5564 485
18 3300013308 Ga0157375_10148354 Ga0157375_101483541 487
19 3300031995 Ga0307409_100086808 Ga0307409_1000868082 487
20 3300053104 Ga0500556_0000001 Ga0500556_0000001_637623_639110 490
21 3300053139 Ga0500568_0000006 Ga0500568_0000006_55510_56997 490
22 3300041452 Ga0451793_0203174 Ga0451793_0203174_417_1904 491
23 3300053140 Ga0500573_0000192 Ga0500573_0000192_17852_19345 492
24 3300003323 rootH1_10059393 rootH1_100593933 493
25 3300053087 Ga0500643_000072 Ga0500643_000072_8293_9798 493
26 iso_pu_bacteria 2870622029 2870624069 493
27 3300037312 Ga0395899_0002856 Ga0395899_0002856_8749_10434 494
28 3300053140 Ga0500573_0001466 Ga0500573_0001466_720_2231 495
29 3300048920 Ga0496117_0011088 Ga0496117_0011088_3373_4953 496
30 3300048921 Ga0496118_0010551 Ga0496118_0010551_827_2407 496
31 3300048927 Ga0496124_0000209 Ga0496124_0000209_15328_16908 496
32 3300037312 Ga0395899_0010946 Ga0395899_0010946_4504_6015 497
33 3300037418 Ga0395900_0075201 Ga0395900_0075201_394_1905 497
34 3300037466 Ga0395898_0001209 Ga0395898_0001209_31386_32897 497
35 3300048908 Ga0496105_0093531 Ga0496105_0093531_262_1773 497
36 3300048917 Ga0496114_0060862 Ga0496114_0060862_304_1815 497
37 3300049586 Ga0501070_0000063 Ga0501070_0000063_14270_15781 497
38 iso_pu_bacteria 2939657138 2939658546 499
39 3300025230 Ga0209563_100201 Ga0209563_10020119 500
40 3300053140 Ga0500573_0017798 Ga0500573_0017798_1701_3215 500
41 iso_pu_bacteria 2643221632 2644183104 500
42 iso_pu_bacteria 2844841374 2844843044 500
43 iso_pu_bacteria 2919055335 2919058531 500
44 iso_pu_bacteria 2928153084 2928153186 500
45 3300003752 Ga0055539_1000005 Ga0055539_1000005315 501
46 3300003756 Ga0055533_1000001 Ga0055533_10000011384 501
47 3300003759 Ga0055525_1000121 Ga0055525_100012113 501
48 3300025225 Ga0209566_100065 Ga0209566_10006532 501
49 3300025226 Ga0209674_100001 Ga0209674_1000011384 501
50 3300025230 Ga0209563_100001 Ga0209563_1000011384 501
51 3300025253 Ga0209677_100001 Ga0209677_1000011384 501
52 3300044693 Ga0466961_0020661 Ga0466961_0020661_1968_3488 501
53 3300053136 Ga0500559_0002209 Ga0500559_0002209_6805_8322 501
54 iso_pu_bacteria 2919523602 2919525131 501
55 iso_pu_bacteria 2966921586 2966921947 501
56 3300048921 Ga0496118_0001945 Ga0496118_0001945_9129_10667 502
57 iso_pu_bacteria 2857729791 2857730851 502
58 iso_pu_bacteria 2928121344 2928122569 502
59 iso_pu_bacteria 2939660829 2939662019 502
60 iso_pu_bacteria 2862993130 2862995658 503
61 3300003578 Ga0006562J51391_1169944 Ga0006562J51391_11699442 504
62 3300003578 Ga0006562J51391_1169945 Ga0006562J51391_11699456 504
63 3300013105 Ga0157369_10004709 Ga0157369_100047096 504
64 3300048920 Ga0496117_0015916 Ga0496117_0015916_2931_4460 504
65 iso_pu_bacteria 2884763398 2884766022 504
66 3300044765 Ga0466970_0006370 Ga0466970_0006370_974_2602 505
67 iso_pu_bacteria 2904501621 2904504767 505
68 iso_pu_bacteria 2908674828 2908676752 505
69 iso_pu_bacteria 2909074476 2909077592 505
70 iso_pu_bacteria 2919039151 2919041534 505
71 iso_pu_bacteria 2919042368 2919045793 505
72 iso_pu_bacteria 2928500415 2928502769 505
73 iso_pu_bacteria 2984551494 2984551686 505
74 3300025253 Ga0209677_101445 Ga0209677_1014451 506
75 iso_pu_bacteria 2904430863 2904432056 506
76 iso_pu_bacteria 2643221649 2644278496 507
77 iso_pu_bacteria 8057345674 8057347729 507
78 3300013105 Ga0157369_10008012 Ga0157369_1000801211 508
79 3300048925 Ga0496122_0003784 Ga0496122_0003784_8441_10021 508
80 3300048926 Ga0496123_0020594 Ga0496123_0020594_3517_5094 508
81 iso_pu_bacteria 2751185788 2753303382 508
82 iso_pu_bacteria 2928104781 2928107321 508
83 iso_pu_bacteria 2964326757 2964329277 508
84 iso_pu_bacteria 2643221619 2644114506 509
85 iso_pu_bacteria 2808606372 2808901303 509
86 3300005327 Ga0070658_10002201 Ga0070658_100022013 510
87 3300025909 Ga0207705_10000213 Ga0207705_1000021342 510
88 3300053153 Ga0500616_0000113 Ga0500616_0000113_17225_18802 510
89 iso_pu_bacteria 2643221616 2644096764 510
90 3300048908 Ga0496105_0043723 Ga0496105_0043723_1972_3540 511
91 3300048918 Ga0496115_0006983 Ga0496115_0006983_4498_6066 511
92 iso_pu_bacteria 2585428094 2587864165 511
93 iso_pu_bacteria 2966924647 2966925596 511
94 3300053080 Ga0500635_0000179 Ga0500635_0000179_16859_18454 513
95 iso_pu_bacteria 2844852863 2844854671 513
96 3300002772 JGI25164J39214_1000786 JGI25164J39214_10007869 514
97 3300003214 JGI25165J46597_1000004 JGI25165J46597_1000004117 514
98 3300025231 Ga0207427_100010 Ga0207427_100010464 514
99 3300025233 Ga0209437_101254 Ga0209437_1012543 514
100 3300025261 Ga0209233_1000001 Ga0209233_10000011485 514

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08241

Methyltransf_11

Methyltransferase domain

175

254

0.94

PF23186

15

106

0.92

PF13649

Methyltransf_25

Methyltransferase domain

174

256

0.89

PF06325

PrmA

Ribosomal protein L11 methyltransferase (PrmA)

160

243

0.85

PF05175

MTS

Methyltransferase small domain

154

311

0.84

PF13847

Methyltransf_31

Methyltransferase domain

168

311

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
3cjq-assembly3.cif.gz_G ribosomal protein l11 methyltransferase (prma) in complex with dimethylated ribosomal protein l11 in space group p212121 0.8386 155 287
6pdm-assembly1.cif.gz_A crystal structure of human protein arginine methyltransferase 9 (prmt9) 0.8294 171 243
3cjq-assembly2.cif.gz_D ribosomal protein l11 methyltransferase (prma) in complex with dimethylated ribosomal protein l11 in space group p212121 0.8245 155 287
3cjr-assembly1.cif.gz_A ribosomal protein l11 methyltransferase (prma) in complex with ribosomal protein l11 (k39a) and inhibitor sinefungin. 0.8186 155 287
2nxe-assembly2.cif.gz_B t. thermophilus ribosomal protein l11 methyltransferase (prma) in complex with s-adenosyl-l-methionine 0.8018 155 310
ID Description Score Start End Superfamily
af_C0H5A2_481_622_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8958 165 225 3.40.50.150
af_A0A1D6EFY7_537_616_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8804 165 230 3.40.50.150
af_Q4CMB6_37_161_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8741 166 222 3.40.50.150
af_A4I5Q9_225_346_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8519 152 238 3.40.50.150
af_D3ZDR5_147_284_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8487 168 238 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A852SP39-F1-model_v4 Methyltransferase small domain-containing protein 0.9683 4 514 GO:0003676
GO:0008170
GO:0008276
GO:0008757
GO:0032259
GO:0035657
AF-W1VC45-F1-model_v4 Methyltransferase 0.9633 412 511 GO:0008168
GO:0032259
AF-U2RVQ6-F1-model_v4 Methyltransferase small domain protein 0.9631 62 511 GO:0003676
GO:0006364
GO:0008170
GO:0008276
GO:0008757
GO:0032259
GO:0035657
AF-A0A852SP39-F1-model_v4 Methyltransferase small domain-containing protein 0.961 4 514 GO:0003676
GO:0008170
GO:0008276
GO:0008757
GO:0032259
GO:0035657
AF-W7T1C7-F1-model_v4 Transferase 0.957 418 513 GO:0016740

Feature Viewer

pLDDT pTM Quality
89.3 0.88 High
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Predicted Structure (AlphaFold2)

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