F441833

General Info

Members Datasets Scaffolds Average Seq Length
429 395 180 295

Family's Representative Sequence

Representative Sequence 3300005331|Ga0070670_100151103|Ga0070670_1001511032
Length 335
Sequence MTIWNGTGRRIYMQEVGTRDGLQAESAFVPTADKIALVNALSEAGMAKIEVTAFVSPKAIPALRDAETVLREIERKPGVIYSALVPNVRGAERAIDARADELNLVMSASESHNLSNLRMTREQSFDALSEVAKMAAYTGVPVNISLSCSFGCPMEGDVPEDTVLEWSRRFVDDIGARGVTLCDTTGMAYPSQVAQLTRAFSKRWVERDDTATELTLHFHNTRGMGLANVLAAIDAGADRFDASFGGIGGCPYAPGATGNVCSEEIVHALQLMGYDTGVNLERLIDAAAHLPGLIGHDIPSQIVKAGRRLDLHRPPADFDSIRERAMARDHIPTST

Samples

Sample ID Description Type Environment
1 2508501122 Ensifer yinggardensis WSM1721 Isolate Nodule
2 2509276019 Ensifer aridi TW10 Isolate Nodule
3 2510065057 Sinorhizobium meliloti WSM1022 Isolate Nodule
4 2511231052 Sinorhizobium meliloti AK58 Isolate Nodule
5 2512047086 Sinorhizobium arboris LMG 14919 Isolate Nodule
6 2512875026 Sinorhizobium medicae WSM1115 Isolate Nodule
7 2513237086 Sinorhizobium meliloti MVII-I Isolate Nodule
8 2513237089 Sinorhizobium medicae DI28 Isolate Nodule
9 2513237091 Sinorhizobium meliloti RRI128 Isolate Nodule
10 2513237140 Sinorhizobium meliloti GVPV12 Isolate Nodule
11 2513237143 Sinorhizobium meliloti Mlalz-1 Isolate Nodule
12 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
13 2513237156 Sinorhizobium medicae WSM1369 Isolate Nodule
14 2513237160 Sinorhizobium medicae WSM244 Isolate Nodule
15 2515154107 Sinorhizobium meliloti 4H41 Isolate Nodule
16 2516143018 Ensifer sp. BR816 Isolate Nodule
17 2516653046 Sinorhizobium meliloti BO21CC Isolate Nodule
18 2517487022 Sinorhizobium medicae WSM4191 Isolate Nodule
19 2524023207 Ensifer sp. USDA 6670 Isolate Nodule
20 2551306084 Sinorhizobium meliloti 5A14 Isolate Nodule
21 2551306085 Sinorhizobium meliloti AE608H Isolate Nodule
22 2551306086 Sinorhizobium meliloti AK11 Isolate Nodule
23 2551306087 Sinorhizobium meliloti A0643DD Isolate Nodule
24 2551306089 Sinorhizobium meliloti 1A42 Isolate Nodule
25 2551306090 Sinorhizobium meliloti A0641M Isolate Nodule
26 2551306091 Sinorhizobium meliloti C0431A Isolate Nodule
27 2551306092 Sinorhizobium meliloti AK75 Isolate Nodule
28 2551306093 Sinorhizobium meliloti C0438LL Isolate Nodule
29 2558860100 Sinorhizobium sp. PC2 Isolate Nodule
30 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
31 2599185352 Sinorhizobium sp. NFACC03 Isolate Rhizoplane
32 2643221557 Ensifer sp. Root558 Isolate Unclassified
33 2643221610 Ensifer sp. Root74 Isolate Unclassified
34 2643221618 Ensifer sp. Root231 Isolate Unclassified
35 2643221626 Ensifer sp. Root31 Isolate Unclassified
36 2643221655 Ensifer sp. Root1252 Isolate Unclassified
37 2643221659 Ensifer sp. Root127 Isolate Unclassified
38 2643221668 Ensifer sp. Root423 Isolate Unclassified
39 2643221675 Ensifer sp. Root1298 Isolate Unclassified
40 2643221680 Ensifer sp. Root1312 Isolate Unclassified
41 2643221698 Ensifer sp. Root142 Isolate Unclassified
42 2643221712 Ensifer sp. Root258 Isolate Unclassified
43 2643221723 Ensifer sp. Root278 Isolate Unclassified
44 2643221726 Ensifer sp. Root954 Isolate Unclassified
45 2657244999 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
46 2690316117 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
47 2738541307 Variovorax sp. GV008 Isolate Unclassified
48 2738543013 Variovorax sp. BT01 Isolate Unclassified
49 2751185821 Ensifer shofinae CCBAU 251167 Isolate Unclassified
50 2791355082 Ensifer alkalisoli YIC4027 Isolate Nodule
51 2791355091 Sinorhizobium sp. FG01 Isolate Nodule
52 2791355092 Sinorhizobium sp. NG07B Isolate Nodule
53 2791355094 Sinorhizobium sp. BJ1 Isolate Nodule
54 2802428858 Sinorhizobium medicae M14-1 Isolate Nodule
55 2802428859 Sinorhizobium medicae SF3.41 Isolate Nodule
56 2802428860 Sinorhizobium medicae M19-1 Isolate Nodule
57 2802428861 Sinorhizobium medicae USDA1037 Isolate Nodule
58 2802428862 Sinorhizobium medicae M7-4 Isolate Nodule
59 2802428863 Sinorhizobium medicae M26-2 Isolate Nodule
60 2802429268 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
61 2838074704 Sinorhizobium terangae SEMIA 6460 Isolate Unclassified
62 2844002411 Mesorhizobium sp. M7D.F.Ca.US.005.01.1.1 Isolate Nodule
63 2844163670 Ensifer sp. 1H6 Isolate Unclassified
64 2847417321 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
65 2848992105 Sinorhizobium fredii CCBAU 25509 Isolate Unclassified
66 2850079185 Ensifer aridi JNVU TP6 Isolate Unclassified
67 2854681122 Luteovulum sphaeroides SCJ Isolate Unclassified
68 2855825444 Sinorhizobium meliloti CXM1-105 Isolate Nodule
69 2855839649 Sinorhizobium meliloti AK555 Isolate Unclassified
70 2855872281 Sinorhizobium fredii PCH1 Isolate Nodule
71 2858800743 Sinorhizobium meliloti AK170 Isolate Unclassified
72 2878738818 Mesorhizobium sp. M8A.F.Ca.ET.218.01.1.1 Isolate Nodule
73 2896384573 Ensifer sp. MPMI2T Isolate Unclassified
74 2913295892 Sinorhizobium kostiensis DSM 13372 Isolate Nodule
75 2915980308 Sinorhizobium medicae USDA1149 Isolate Nodule
76 2915986958 Sinorhizobium meliloti USDA1659 Isolate Nodule
77 2915993759 Sinorhizobium meliloti USDA1336 Isolate Nodule
78 2916000859 Sinorhizobium meliloti USDA1562 Isolate Nodule
79 2916007675 Sinorhizobium meliloti USDA1289 Isolate Nodule
80 2916014648 Sinorhizobium meliloti USDA1583 Isolate Nodule
81 2916021584 Sinorhizobium meliloti USDA1550 Isolate Nodule
82 2916028427 Sinorhizobium meliloti USDA1613 Isolate Nodule
83 2916035215 Sinorhizobium meliloti 3011 Isolate Nodule
84 2916041962 Sinorhizobium meliloti USDA1795 Isolate Nodule
85 2916048683 Sinorhizobium meliloti USDA1796 Isolate Nodule
86 2916055098 Sinorhizobium meliloti USDA1770 Isolate Nodule
87 2916061851 Sinorhizobium medicae USDA1638 Isolate Nodule
88 2916076590 Sinorhizobium meliloti USDA1661 Isolate Nodule
89 2919476304 Duganella sp. 3397 Isolate Unclassified
90 2920760137 Ensifer psoraleae CCBAU 65732 Isolate Unclassified
91 2920822456 Ensifer sesbaniae CCBAU 65729 Isolate Unclassified
92 2921201388 Sinorhizobium meliloti USDA1692 Isolate Nodule
93 2921208531 Sinorhizobium meliloti USDA1660 Isolate Nodule
94 2921237296 Sinorhizobium meliloti USDA1508 Isolate Nodule
95 2921244191 Sinorhizobium meliloti 2119 Isolate Nodule
96 2921250672 Sinorhizobium medicae USDA1169 Isolate Nodule
97 2921257292 Sinorhizobium meliloti USDA1320 Isolate Nodule
98 2921263974 Sinorhizobium meliloti USDA1107 Isolate Nodule
99 2921282425 Sinorhizobium meliloti USDA1203 Isolate Nodule
100 2921289301 Sinorhizobium meliloti USDA1730 Isolate Nodule
101 2921296804 Sinorhizobium meliloti USDA1200 Isolate Nodule
102 2924144063 Sinorhizobium meliloti USDA1022 Isolate Nodule
103 2924150972 Sinorhizobium meliloti USDA1700 Isolate Nodule
104 2924158325 Sinorhizobium meliloti USDA1146 Isolate Nodule
105 2924165586 Sinorhizobium meliloti USDA1264 Isolate Nodule
106 2924172951 Sinorhizobium meliloti USDA1626 Isolate Nodule
107 2924179722 Sinorhizobium meliloti USDA1280 Isolate Nodule
108 2924186466 Sinorhizobium meliloti USDA1389 Isolate Nodule
109 2924200457 Sinorhizobium meliloti USDA1007 Isolate Nodule
110 2924214083 Sinorhizobium meliloti USDA1702 Isolate Nodule
111 2924221636 Sinorhizobium meliloti USDA1416 Isolate Nodule
112 2924228884 Sinorhizobium meliloti USDA1581 Isolate Nodule
113 2924733363 Mesorhizobium sp. M7A.F.Ca.US.011.01.1.1 Isolate Nodule
114 2924776078 Mesorhizobium sp. M8A.F.Ca.ET.213.01.1.1 Isolate Nodule
115 2936996657 Sinorhizobium meliloti USDA1025 Isolate Nodule
116 2937002841 Sinorhizobium meliloti USDA1006 Isolate Nodule
117 2937009748 Sinorhizobium meliloti USDA1162 Isolate Nodule
118 2937016420 Sinorhizobium meliloti USDA1027 Isolate Nodule
119 2937023124 Sinorhizobium meliloti USDA1335 Isolate Nodule
120 2937029754 Sinorhizobium medicae USDA1624 Isolate Nodule
121 2937036028 Sinorhizobium medicae USDA1608 Isolate Nodule
122 2937042894 Sinorhizobium meliloti USDA1687 Isolate Nodule
123 2937049772 Sinorhizobium meliloti USDA1691 Isolate Nodule
124 2937056579 Sinorhizobium meliloti USDA1357 Isolate Nodule
125 2937063883 Sinorhizobium meliloti USDA1808 Isolate Nodule
126 2937071275 Sinorhizobium meliloti USDA1623 Isolate Nodule
127 2937078374 Sinorhizobium medicae USDA1004 Isolate Nodule
128 2937084907 Sinorhizobium medicae USDA1664 Isolate Nodule
129 2937091812 Sinorhizobium meliloti USDA1221 Isolate Nodule
130 2937098957 Sinorhizobium meliloti USDA1519 Isolate Nodule
131 2937106411 Sinorhizobium meliloti USDA1214 Isolate Nodule
132 2937113482 Sinorhizobium meliloti USDA1180 Isolate Nodule
133 2937119839 Sinorhizobium meliloti USDA1790 Isolate Nodule
134 2937126314 Sinorhizobium meliloti USDA1612 Isolate Nodule
135 2945909444 Variovorax sp. CRF3-Va-1 W1I1 Isolate Rhizosphere
136 2945984333 Variovorax sp. W2I14 Isolate Rhizosphere
137 2957375807 Sinorhizobium medicae USDA1632 Isolate Nodule
138 2957382221 Sinorhizobium meliloti USDA1919 Isolate Nodule
139 2957388812 Sinorhizobium meliloti USDA1195 Isolate Nodule
140 2957395598 Sinorhizobium meliloti USDA1237 Isolate Nodule
141 2957402308 Sinorhizobium meliloti USDA1794 Isolate Nodule
142 2957408893 Sinorhizobium meliloti USDA1163 Isolate Nodule
143 2957415311 Sinorhizobium meliloti USDA1724 Isolate Nodule
144 2957422303 Sinorhizobium meliloti USDA1497 Isolate Nodule
145 2957437181 Sinorhizobium medicae USDA1694 Isolate Nodule
146 2957443900 Sinorhizobium meliloti USDA1734 Isolate Nodule
147 2957450854 Sinorhizobium meliloti USDA1655 Isolate Nodule
148 2957457609 Sinorhizobium meliloti USDA1751 Isolate Nodule
149 2957464669 Sinorhizobium meliloti USDA1520 Isolate Nodule
150 2957471148 Sinorhizobium meliloti USDA1204 Isolate Nodule
151 2957478035 Sinorhizobium meliloti USDA1171 Isolate Nodule
152 2957484790 Sinorhizobium meliloti USDA1464 Isolate Nodule
153 2957491536 Sinorhizobium meliloti USDA1804 Isolate Nodule
154 2957498199 Sinorhizobium meliloti USDA1561 Isolate Nodule
155 2957505466 Sinorhizobium meliloti USDA1696 Isolate Nodule
156 2958092219 Mesorhizobium sp. M8A.F.Ca.ET.059.01.1.1 Isolate Nodule
157 2958144490 Mesorhizobium sp. M8A.F.Ca.ET.021.01.1.1 Isolate Nodule
158 2960584000 Sinorhizobium meliloti USDA1530 Isolate Nodule
159 2960591022 Sinorhizobium medicae USDA1066 Isolate Nodule
160 2960597568 Sinorhizobium meliloti 3085 Isolate Nodule
161 2960603979 Sinorhizobium meliloti USDA1580 Isolate Nodule
162 2960610863 Sinorhizobium meliloti USDA1792 Isolate Nodule
163 2960617483 Sinorhizobium meliloti USDA1719 Isolate Nodule
164 2960624210 Sinorhizobium meliloti USDA1415 Isolate Nodule
165 2960631154 Sinorhizobium medicae USDA1629 Isolate Nodule
166 2960637947 Sinorhizobium meliloti USDA1202 Isolate Nodule
167 2960645483 Sinorhizobium meliloti USDA1703 Isolate Nodule
168 2960652885 Sinorhizobium meliloti USDA1199 Isolate Nodule
169 2960660292 Sinorhizobium meliloti USDA1883 Isolate Nodule
170 2960667422 Sinorhizobium meliloti USDA1170 Isolate Nodule
171 2960674078 Sinorhizobium meliloti USDA1666 Isolate Nodule
172 2960680706 Sinorhizobium medicae USDA1150 Isolate Nodule
173 2960687367 Sinorhizobium meliloti USDA1462 Isolate Nodule
174 2960693952 Sinorhizobium medicae USDA1630 Isolate Nodule
175 2964607997 Sinorhizobium meliloti USDA1212 Isolate Nodule
176 2964615318 Sinorhizobium meliloti USDA1248 Isolate Nodule
177 2964621998 Sinorhizobium meliloti USDA1235 Isolate Nodule
178 2964628898 Sinorhizobium meliloti USDA1191 Isolate Nodule
179 2964636051 Sinorhizobium meliloti USDA1594 Isolate Nodule
180 2964643177 Sinorhizobium meliloti USDA1760 Isolate Nodule
181 2964649959 Sinorhizobium meliloti USDA1591 Isolate Nodule
182 2964656573 Sinorhizobium meliloti USDA1308 Isolate Nodule
183 2964663802 Sinorhizobium meliloti USDA1688 Isolate Nodule
184 2964670856 Sinorhizobium meliloti USDA1211 Isolate Nodule
185 2964678106 Sinorhizobium meliloti USDA1210 Isolate Nodule
186 2964685014 Sinorhizobium meliloti USDA1232 Isolate Nodule
187 2964691889 Sinorhizobium meliloti USDA1379 Isolate Nodule
188 2964698721 Sinorhizobium meliloti USDA1656 Isolate Nodule
189 2964705432 Sinorhizobium meliloti USDA1614 Isolate Nodule
190 2964712639 Sinorhizobium meliloti USDA1616 Isolate Nodule
191 2964719344 Sinorhizobium meliloti USDA1456 Isolate Nodule
192 2967664464 Sinorhizobium meliloti USDA1208 Isolate Nodule
193 2967671571 Sinorhizobium meliloti USDA1496 Isolate Nodule
194 2967678726 Sinorhizobium meliloti USDA1467 Isolate Nodule
195 2967686174 Sinorhizobium medicae USDA1641 Isolate Nodule
196 2967693043 Sinorhizobium meliloti USDA1183 Isolate Nodule
197 2967699805 Sinorhizobium meliloti USDA1695 Isolate Nodule
198 2967706974 Sinorhizobium meliloti USDA1206 Isolate Nodule
199 2967714385 Sinorhizobium meliloti USDA1023 Isolate Nodule
200 2967721400 Sinorhizobium meliloti USDA1742 Isolate Nodule
201 2967728569 Sinorhizobium medicae USDA1607 Isolate Nodule
202 2967735183 Sinorhizobium meliloti USDA1710 Isolate Nodule
203 2967742019 Sinorhizobium meliloti USDA1676 Isolate Nodule
204 2967755722 Sinorhizobium meliloti USDA1302 Isolate Nodule
205 2967762386 Sinorhizobium meliloti USDA1397 Isolate Nodule
206 2967769361 Sinorhizobium meliloti USDA1005 Isolate Nodule
207 2967775926 Sinorhizobium meliloti USDA1678 Isolate Nodule
208 2970019648 Sinorhizobium meliloti USDA1603 Isolate Nodule
209 2970026789 Sinorhizobium medicae USDA1611 Isolate Nodule
210 2970033650 Sinorhizobium meliloti USDA1565 Isolate Nodule
211 2970040964 Sinorhizobium meliloti USDA1501 Isolate Nodule
212 2970047711 Sinorhizobium meliloti USDA1793 Isolate Nodule
213 2970054988 Sinorhizobium meliloti USDA1031 Isolate Nodule
214 2970061556 Sinorhizobium meliloti USDA1810 Isolate Nodule
215 2970068827 Sinorhizobium meliloti USDA1227 Isolate Nodule
216 2970076120 Sinorhizobium meliloti USDA1706 Isolate Nodule
217 2970082768 Sinorhizobium meliloti USDA1803 Isolate Nodule
218 2970088815 Sinorhizobium meliloti USDA1819 Isolate Nodule
219 2970095765 Sinorhizobium meliloti USDA1225 Isolate Nodule
220 2970102677 Sinorhizobium meliloti USDA1325 Isolate Nodule
221 2970109326 Sinorhizobium meliloti USDA1186 Isolate Nodule
222 2970116247 Sinorhizobium meliloti USDA1566 Isolate Nodule
223 2970122695 Sinorhizobium medicae 3082 Isolate Nodule
224 2970129317 Sinorhizobium meliloti USDA1008 Isolate Nodule
225 2970136068 Sinorhizobium meliloti USDA1699 Isolate Nodule
226 2970143518 Sinorhizobium medicae USDA1652 Isolate Nodule
227 2970149975 Sinorhizobium meliloti USDA1215 Isolate Nodule
228 2970156795 Sinorhizobium meliloti USDA1491 Isolate Nodule
229 2970164137 Sinorhizobium meliloti USDA1018 Isolate Nodule
230 2970170962 Sinorhizobium meliloti USDA1571 Isolate Nodule
231 2970177841 Sinorhizobium meliloti USDA1533 Isolate Nodule
232 2970184632 Sinorhizobium meliloti USDA1593 Isolate Nodule
233 2970191845 Sinorhizobium meliloti USDA1187 Isolate Nodule
234 2977516862 Sinorhizobium meliloti USDA1791 Isolate Nodule
235 2977523885 Sinorhizobium meliloti USDA1777 Isolate Nodule
236 2977530762 Sinorhizobium medicae USDA1606 Isolate Nodule
237 2977537788 Sinorhizobium meliloti USDA1184 Isolate Nodule
238 2977544691 Sinorhizobium medicae USDA1631 Isolate Nodule
239 2977551784 Sinorhizobium meliloti USDA1035 Isolate Nodule
240 2977558990 Sinorhizobium meliloti USDA1222 Isolate Nodule
241 2977565890 Sinorhizobium meliloti USDA1617 Isolate Nodule
242 2977572785 Sinorhizobium meliloti USDA1767 Isolate Nodule
243 2977579622 Sinorhizobium meliloti USDA1161 Isolate Nodule
244 3004268573 Mesorhizobium sp. M7A.F.Ca.US.010.02.1.1 Isolate Nodule
245 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
246 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
247 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
248 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
249 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
250 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
251 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
252 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
253 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
254 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
255 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
256 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
257 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
258 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
259 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
260 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
261 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
262 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
263 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
264 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
265 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
266 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
267 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
268 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
269 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
270 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
271 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
272 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
273 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
274 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
275 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
276 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
277 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
278 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
279 3300013249 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.3_F06 Metagenome Rhizosphere
280 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
281 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
282 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
283 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
284 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
285 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
286 3300022739 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - brown nodules Metagenome Nodule
287 3300022740 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - pink nodules Metagenome Nodule
288 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
289 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
290 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
291 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
292 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
293 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
294 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
295 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
296 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
297 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
298 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
299 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
300 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
301 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
302 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
303 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
304 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
305 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
306 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
307 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
308 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
309 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
310 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
311 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
312 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
313 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
314 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
315 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
316 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
317 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
318 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
319 3300031967 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - elongated nodules Metagenome Nodule
320 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
321 3300033430 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - small nodules Metagenome Nodule
322 3300033464 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - branched nodules Metagenome Nodule
323 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
324 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
325 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
326 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
327 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
328 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
329 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
330 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
331 3300042185 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515W_E14_080116_2592 Metagenome Rhizosphere
332 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
333 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
334 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
335 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
336 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
337 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
338 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
339 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
340 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
341 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
342 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
343 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
344 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
345 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
346 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
347 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
348 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
349 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
350 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
351 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
352 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
353 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
354 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
355 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
356 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
357 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
358 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
359 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
360 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
361 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
362 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
363 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
364 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
365 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
366 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
367 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
368 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
369 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
370 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
371 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
372 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
373 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
374 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
375 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
376 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
377 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
378 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
379 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
380 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
381 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
382 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
383 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
384 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
385 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
386 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
387 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
388 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
389 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
390 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
391 643692032 Sinorhizobium fredii NGR234 Isolate Nodule
392 648276728 Sinorhizobium meliloti BL225C Isolate Nodule
393 8003992118 Sinorhizobium meliloti RRI128 Isolate Nodule
394 8003999396 Sinorhizobium medicae WSM1115 Isolate Nodule
395 8049293176 Ensifer alkalisoli YIC4027 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 41.96
Metatranscriptomes 0
Isolates 58.04

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.39
Nodule 53.15
Rhizoplane 2.8
Rhizosphere 26.57
Stem 0
Stem Tuber 0
Unclassified 9.09

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25155J39150_1000006 3300002704 Bacteria 244109
2 JGI25162J39368_1000346 3300002737 Bacteria 39891
3 JGI25159J45721_1000075 3300002987 Bacteria 47795
4 JGI25151J46595_10001832 3300003187 Bacteria 13696
5 JGI25151J46595_10044328 3300003187 Bacteria 1581
6 JGI25153J46596_10001224 3300003215 Bacteria 15474
7 JGI25160J50197_1000073 3300003354 Bacteria 104247
8 JGI25161J50226_1003297 3300003374 Bacteria 3744
9 Ga0055526_1008792 3300003771 Bacteria 4971
10 Ga0055524_1009344 3300003775 Bacteria 4000
11 Ga0055536_1000700 3300003781 Bacteria 22454
12 Ga0055530_10004287 3300003791 Bacteria 7442
13 Ga0055531_10008024 3300003794 Bacteria 5644
14 Ga0055543_1000629 3300004625 Bacteria 18923
15 Ga0065165_1000198 3300005262 Bacteria 104285
16 Ga0070676_10019743 3300005328 Bacteria 3755
17 Ga0070670_100151103 3300005331 Bacteria 2010
18 Ga0068868_100119330 3300005338 Bacteria 2150
19 Ga0068868_100339561 3300005338 Bacteria 1284
20 Ga0070673_100101646 3300005364 Bacteria 2369
21 Ga0070703_10062497 3300005406 Bacteria 1222
22 Ga0070705_100162850 3300005440 Bacteria 1493
23 Ga0070681_10415075 3300005458 Bacteria 1258
24 Ga0070672_100035259 3300005543 Bacteria 3803
25 Ga0070665_100100645 3300005548 Bacteria 2894
26 Ga0068861_100152154 3300005719 Bacteria 1900
27 Ga0068858_100262990 3300005842 Bacteria 1640
28 Ga0075364_10088639 3300006051 Bacteria 2051
29 Ga0075366_10014591 3300006195 Bacteria 4488
30 Ga0075366_10140172 3300006195 Bacteria 1462
31 Ga0075429_100005204 3300006880 Bacteria 11186
32 Ga0079104_1008142 3300006946 Bacteria 3708
33 Ga0099794_10000077 3300007265 Bacteria 36156
34 Ga0099794_10006872 3300007265 Bacteria 4636
35 Ga0099795_10001326 3300007788 Bacteria 5285
36 Ga0105248_10234245 3300009177 Bacteria 2067
37 Ga0099796_10046000 3300010159 Bacteria 1497
38 Ga0157370_10070036 3300013104 Bacteria 3311
39 Ga0171463_1002 3300013249 Bacteria 1274851
40 Ga0182008_10010034 3300014497 Bacteria 5084
41 Ga0182008_10072083 3300014497 Bacteria 1699
42 Ga0183363_1056 3300015690 Bacteria 35540
43 Ga0163161_10000060 3300017792 Bacteria 112916
44 Ga0214544_1000646 3300021320 Bacteria 66087
45 Ga0214542_1000027 3300021321 Bacteria 175107
46 Ga0214542_1016821 3300021321 Bacteria 6905
47 Ga0214543_1000025 3300021327 Bacteria 225351
48 Ga0214543_1000047 3300021327 Bacteria 150894
49 Ga0228711_1015241 3300022739 Bacteria 8428
50 Ga0228710_1006811 3300022740 Bacteria 17155
51 Ga0209436_102796 3300025208 Bacteria 4967
52 Ga0209148_1008158 3300025254 Bacteria 2121
53 Ga0209565_1023860 3300025263 Bacteria 1253
54 Ga0209130_1000153 3300025284 Bacteria 104299
55 Ga0209676_1000666 3300025292 Bacteria 49043
56 Ga0209025_1000333 3300025294 Bacteria 104266
57 Ga0209564_1000280 3300025295 Bacteria 104429
58 Ga0209758_1000308 3300025297 Bacteria 94851
59 Ga0209050_1000852 3300025298 Bacteria 41567
60 Ga0209050_1001962 3300025298 Bacteria 19466
61 Ga0209256_1000064 3300025299 Bacteria 250853
62 Ga0209256_1001123 3300025299 Bacteria 30560
63 Ga0207426_1000280 3300025302 Bacteria 104299
64 Ga0209051_1010996 3300025303 Bacteria 4513
65 Ga0209257_1002180 3300025304 Bacteria 20273
66 Ga0207645_10022751 3300025907 Bacteria 4074
67 Ga0207707_10074566 3300025912 Bacteria 2959
68 Ga0207681_10202944 3300025923 Bacteria 1523
69 Ga0207691_10295453 3300025940 Bacteria 1393
70 Ga0207711_10207995 3300025941 Bacteria 1787
71 Ga0207689_10019275 3300025942 Bacteria 5751
72 Ga0207651_10144559 3300025960 Bacteria 1842
73 Ga0207651_10218984 3300025960 Bacteria 1538
74 Ga0207677_10078256 3300026023 Bacteria 2361
75 Ga0207648_10006778 3300026089 Bacteria 11357
76 Ga0207648_10069136 3300026089 Bacteria 3077
77 Ga0207675_100080456 3300026118 Bacteria 3054
78 Ga0207683_10027211 3300026121 Bacteria 4941
79 Ga0209281_1000314 3300027111 Bacteria 86424
80 Ga0209281_1000463 3300027111 Bacteria 57136
81 Ga0209282_1000068 3300027666 Bacteria 85817
82 Ga0209588_1000008 3300027671 Bacteria 177025
83 Ga0209588_1010531 3300027671 Bacteria 2781
84 Ga0307515_10129528 3300028794 Bacteria 2790
85 Ga0307513_10018468 3300031456 Bacteria 8329
86 Ga0307513_10187891 3300031456 Bacteria 1921
87 Ga0307513_10358399 3300031456 Bacteria 1204
88 Ga0307408_100184177 3300031548 Bacteria 1677
89 Ga0307412_10084411 3300031911 Bacteria 2205
90 Ga0307412_10245998 3300031911 Bacteria 1386
91 Ga0315914_1014431 3300031967 Bacteria 8428
92 Ga0307409_100137283 3300031995 Bacteria 2101
93 Ga0315913_1002536 3300033430 Bacteria 21509
94 Ga0315915_1000007 3300033464 Bacteria 319225
95 Ga0373942_0054135 3300035207 Bacteria 1133
96 Ga0316574_0107123 3300035398 Bacteria 1791
97 Ga0316584_0102497 3300036712 Bacteria 2143
98 Ga0395905_0021521 3300037471 Bacteria 6097
99 Ga0395905_0052630 3300037471 Bacteria 3811
100 Ga0439436_0017711 3300041404 Bacteria 2132
101 Ga0439465_0039803 3300041413 Bacteria 1518
102 Ga0439449_0017416 3300042007 Bacteria 2698
103 Ga0439462_0082601 3300042015 Bacteria 878
104 Ga0450909_004693 3300042185 Bacteria 1954
105 Ga0439434_0028470 3300042435 Bacteria 1691
106 Ga0466969_0021565 3300044656 Bacteria 3329
107 Ga0466966_0014619 3300044684 Bacteria 5196
108 Ga0466966_0047963 3300044684 Bacteria 2721
109 Ga0466961_0039871 3300044693 Bacteria 3010
110 Ga0466968_0088524 3300044735 Bacteria 1369
111 Ga0466970_0017659 3300044765 Bacteria 3687
112 Ga0466957_0011171 3300044842 Bacteria 5172
113 Ga0466958_0024256 3300045836 Bacteria 3568
114 Ga0495638_0094735 3300046460 Bacteria 1794
115 Ga0495650_0083613 3300046471 Bacteria 1226
116 Ga0495605_0070416 3300046474 Bacteria 1654
117 Ga0495584_0000006 3300046491 Bacteria 301775
118 Ga0495584_0012199 3300046491 Bacteria 4391
119 Ga0495585_0022052 3300046492 Bacteria 3655
120 Ga0495585_0034772 3300046492 Bacteria 2848
121 Ga0495583_0000121 3300046506 Bacteria 132793
122 Ga0495642_0139327 3300046528 Bacteria 1047
123 Ga0495598_0014352 3300046537 Bacteria 1980
124 Ga0495621_0006234 3300046539 Bacteria 3469
125 Ga0495625_0185583 3300046660 Bacteria 1380
126 Ga0495588_0007001 3300046674 Bacteria 5111
127 Ga0495669_0000124 3300046684 Bacteria 49700
128 Ga0495670_0016136 3300046691 Bacteria 3672
129 Ga0495649_0089220 3300046694 Bacteria 1644
130 Ga0495683_0076541 3300047323 Bacteria 1637
131 Ga0495687_000005 3300047443 Bacteria 610401
132 Ga0495687_000103 3300047443 Bacteria 128840
133 Ga0495687_051206 3300047443 Bacteria 1754
134 Ga0495686_0105043 3300047472 Bacteria 1700
135 Ga0496100_0033399 3300048903 Bacteria 3219
136 Ga0496101_0212448 3300048904 Bacteria 1499
137 Ga0496102_0021858 3300048905 Bacteria 5663
138 Ga0496103_0042140 3300048906 Bacteria 2808
139 Ga0496103_0227663 3300048906 Bacteria 1199
140 Ga0496104_0156345 3300048907 Bacteria 2188
141 Ga0496108_0245208 3300048911 Bacteria 1558
142 Ga0496109_0013744 3300048912 Bacteria 7034
143 Ga0496109_0136901 3300048912 Bacteria 2289
144 Ga0496110_0036834 3300048913 Bacteria 4250
145 Ga0496111_0016292 3300048914 Bacteria 5118
146 Ga0496121_0018259 3300048924 Bacteria 7086
147 Ga0496123_0033375 3300048926 Bacteria 3706
148 Ga0496125_0192950 3300048928 Bacteria 1343
149 Ga0501032_0045369 3300049569 Bacteria 2973
150 Ga0501033_0109965 3300049570 Bacteria 2006
151 Ga0501034_0004625 3300049571 Bacteria 15250
152 Ga0501034_0022618 3300049571 Bacteria 6404
153 Ga0501034_0176178 3300049571 Bacteria 2104
154 Ga0501036_0032764 3300049572 Bacteria 4393
155 Ga0501036_0073567 3300049572 Bacteria 2889
156 Ga0501037_0102754 3300049573 Bacteria 2061
157 Ga0501037_0267703 3300049573 Bacteria 1193
158 Ga0501039_0256757 3300049575 Bacteria 1374
159 Ga0501043_0031203 3300049579 Bacteria 4190
160 Ga0501047_0342316 3300049581 Bacteria 1333
161 Ga0501068_0002353 3300049584 Bacteria 10061
162 Ga0501070_0325161 3300049586 Bacteria 1250
163 Ga0501072_0020003 3300049588 Bacteria 5183
164 Ga0501073_0000464 3300049589 Bacteria 28106
165 Ga0501074_0007471 3300049590 Bacteria 7904
166 Ga0501080_0052885 3300049742 Bacteria 3780
167 Ga0501080_0135395 3300049742 Bacteria 2280
168 Ga0501035_0002658 3300049822 Bacteria 17379
169 Ga0501035_0017880 3300049822 Bacteria 6540
170 Ga0501035_0033120 3300049822 Bacteria 4699
171 Ga0501035_0423621 3300049822 Bacteria 1105
172 Ga0501044_0001216 3300049823 Bacteria 30550
173 Ga0501044_0028966 3300049823 Bacteria 5841
174 Ga0501044_0064203 3300049823 Bacteria 3749
175 nmdc:mga0k408_32570_c1 3300050493 Bacteria 2977
176 nmdc:mga09592_4479_c1 3300050508 Bacteria 11299
177 nmdc:mga0qj67_147475_c1 3300050509 Bacteria 1908
178 Ga0500643_002465 3300053087 Bacteria 9532
179 Ga0500568_0012436 3300053139 Bacteria 3915
180 Ga0500622_0006574 3300053156 Bacteria 6713

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049742 Ga0501080_0052885 Ga0501080_0052885_3020_3742 221
2 3300048928 Ga0496125_0192950 Ga0496125_0192950_478_1320 246
3 iso_pu_bacteria 2958092219 2958097399 253
4 3300048903 Ga0496100_0033399 Ga0496100_0033399_40_939 272
5 3300042015 Ga0439462_0082601 Ga0439462_0082601_12_842 276
6 3300042435 Ga0439434_0028470 Ga0439434_0028470_247_1149 276
7 3300049571 Ga0501034_0004625 Ga0501034_0004625_12561_13463 276
8 3300049584 Ga0501068_0002353 Ga0501068_0002353_3128_4030 276
9 3300049586 Ga0501070_0325161 Ga0501070_0325161_333_1235 276
10 3300049588 Ga0501072_0020003 Ga0501072_0020003_2514_3416 276
11 3300049589 Ga0501073_0000464 Ga0501073_0000464_15425_16327 276
12 3300049590 Ga0501074_0007471 Ga0501074_0007471_2291_3193 276
13 3300005440 Ga0070705_100162850 Ga0070705_1001628502 279
14 3300046460 Ga0495638_0094735 Ga0495638_0094735_211_1170 279
15 3300006880 Ga0075429_100005204 Ga0075429_1000052048 281
16 3300050508 nmdc:mga09592_4479_c1 nmdc:mga09592_4479_c1_1571_2551 281
17 3300050509 nmdc:mga0qj67_147475_c1 nmdc:mga0qj67_147475_c1_624_1604 281
18 iso_pu_bacteria 2924733363 2924738201 281
19 iso_pu_bacteria 3004268573 3004270732 281
20 3300007265 Ga0099794_10000077 Ga0099794_100000775 282
21 3300027671 Ga0209588_1000008 Ga0209588_100000881 282
22 3300025254 Ga0209148_1008158 Ga0209148_10081582 283
23 3300035398 Ga0316574_0107123 Ga0316574_0107123_515_1366 283
24 3300049573 Ga0501037_0267703 Ga0501037_0267703_177_1028 283
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30 3300005458 Ga0070681_10415075 Ga0070681_104150752 284
31 3300006051 Ga0075364_10088639 Ga0075364_100886392 284
32 3300007265 Ga0099794_10006872 Ga0099794_100068723 284
33 3300007788 Ga0099795_10001326 Ga0099795_100013267 284
34 3300010159 Ga0099796_10046000 Ga0099796_100460002 284
35 3300025912 Ga0207707_10074566 Ga0207707_100745662 284
36 3300027671 Ga0209588_1010531 Ga0209588_10105313 284
37 3300044684 Ga0466966_0047963 Ga0466966_0047963_518_1465 284
38 3300048924 Ga0496121_0018259 Ga0496121_0018259_5162_6088 284
39 3300049569 Ga0501032_0045369 Ga0501032_0045369_248_1102 284
40 3300049570 Ga0501033_0109965 Ga0501033_0109965_883_1737 284
41 3300049571 Ga0501034_0022618 Ga0501034_0022618_163_1017 284
42 3300049571 Ga0501034_0176178 Ga0501034_0176178_553_1407 284
43 3300049572 Ga0501036_0032764 Ga0501036_0032764_2732_3586 284
44 3300049572 Ga0501036_0073567 Ga0501036_0073567_1982_2836 284
45 3300049573 Ga0501037_0102754 Ga0501037_0102754_359_1213 284
46 3300049575 Ga0501039_0256757 Ga0501039_0256757_90_944 284
47 3300049579 Ga0501043_0031203 Ga0501043_0031203_1334_2188 284
48 3300049581 Ga0501047_0342316 Ga0501047_0342316_193_1047 284
49 3300049742 Ga0501080_0135395 Ga0501080_0135395_454_1308 284
50 3300049822 Ga0501035_0002658 Ga0501035_0002658_541_1395 284
51 3300049822 Ga0501035_0423621 Ga0501035_0423621_220_1074 284
52 3300049823 Ga0501044_0028966 Ga0501044_0028966_4447_5301 284
53 3300049823 Ga0501044_0064203 Ga0501044_0064203_868_1722 284
54 3300036712 Ga0316584_0102497 Ga0316584_0102497_1209_2069 285
55 3300047472 Ga0495686_0105043 Ga0495686_0105043_565_1500 285
56 iso_pu_bacteria 2509276019 2509379402 285
57 iso_pu_bacteria 2510065057 2510307912 285
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69 iso_pu_bacteria 2515154107 2515610793 285
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71 iso_pu_bacteria 2516653046 2516896137 285
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121 iso_pu_bacteria 2896384573 2896391856 285
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160 iso_pu_bacteria 2936996657 2937002238 285
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285 iso_pu_bacteria 643692032 643823022 285
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287 iso_pu_bacteria 8003992118 8003996737 285
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290 3300031456 Ga0307513_10018468 Ga0307513_100184683 286
291 3300053156 Ga0500622_0006574 Ga0500622_0006574_1089_2012 286
292 3300005548 Ga0070665_100100645 Ga0070665_1001006454 287
293 3300025297 Ga0209758_1000308 Ga0209758_100030828 287
294 3300048906 Ga0496103_0042140 Ga0496103_0042140_727_1665 287
295 iso_pu_bacteria 2588253510 2588292382 287
296 iso_pu_bacteria 2919476304 2919477204 287
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301 3300002704 JGI25155J39150_1000006 JGI25155J39150_100000626 289
302 3300002737 JGI25162J39368_1000346 JGI25162J39368_100034615 289
303 3300002987 JGI25159J45721_1000075 JGI25159J45721_100007542 289
304 3300003187 JGI25151J46595_10001832 JGI25151J46595_100018329 289
305 3300003187 JGI25151J46595_10044328 JGI25151J46595_100443282 289
306 3300003215 JGI25153J46596_10001224 JGI25153J46596_1000122411 289
307 3300003354 JGI25160J50197_1000073 JGI25160J50197_10000736 289
308 3300003374 JGI25161J50226_1003297 JGI25161J50226_10032972 289
309 3300003771 Ga0055526_1008792 Ga0055526_10087922 289
310 3300003775 Ga0055524_1009344 Ga0055524_10093442 289
311 3300003781 Ga0055536_1000700 Ga0055536_10007008 289
312 3300003791 Ga0055530_10004287 Ga0055530_100042877 289
313 3300003794 Ga0055531_10008024 Ga0055531_100080244 289
314 3300004625 Ga0055543_1000629 Ga0055543_100062918 289
315 3300005262 Ga0065165_1000198 Ga0065165_10001986 289
316 3300005328 Ga0070676_10019743 Ga0070676_100197432 289
317 3300005331 Ga0070670_100151103 Ga0070670_1001511032 289
318 3300005338 Ga0068868_100119330 Ga0068868_1001193302 289
319 3300005338 Ga0068868_100339561 Ga0068868_1003395612 289
320 3300005364 Ga0070673_100101646 Ga0070673_1001016462 289
321 3300005406 Ga0070703_10062497 Ga0070703_100624972 289
322 3300005543 Ga0070672_100035259 Ga0070672_1000352592 289
323 3300005719 Ga0068861_100152154 Ga0068861_1001521542 289
324 3300005842 Ga0068858_100262990 Ga0068858_1002629902 289
325 3300006195 Ga0075366_10014591 Ga0075366_100145913 289
326 3300006195 Ga0075366_10140172 Ga0075366_101401722 289
327 3300006946 Ga0079104_1008142 Ga0079104_10081422 289
328 3300009177 Ga0105248_10234245 Ga0105248_102342452 289
329 3300013104 Ga0157370_10070036 Ga0157370_100700363 289
330 3300013249 Ga0171463_1002 Ga0171463_10026 289
331 3300014497 Ga0182008_10010034 Ga0182008_100100342 289
332 3300014497 Ga0182008_10072083 Ga0182008_100720832 289
333 3300015690 Ga0183363_1056 Ga0183363_105633 289
334 3300017792 Ga0163161_10000060 Ga0163161_1000006020 289
335 3300021320 Ga0214544_1000646 Ga0214544_100064659 289
336 3300021321 Ga0214542_1000027 Ga0214542_100002764 289
337 3300021321 Ga0214542_1016821 Ga0214542_10168214 289
338 3300021327 Ga0214543_1000025 Ga0214543_1000025132 289
339 3300021327 Ga0214543_1000047 Ga0214543_100004738 289
340 3300022739 Ga0228711_1015241 Ga0228711_10152412 289
341 3300022740 Ga0228710_1006811 Ga0228710_10068119 289
342 3300025208 Ga0209436_102796 Ga0209436_1027966 289
343 3300025263 Ga0209565_1023860 Ga0209565_10238602 289
344 3300025284 Ga0209130_1000153 Ga0209130_10001536 289
345 3300025292 Ga0209676_1000666 Ga0209676_100066619 289
346 3300025294 Ga0209025_1000333 Ga0209025_10003336 289
347 3300025295 Ga0209564_1000280 Ga0209564_10002806 289
348 3300025298 Ga0209050_1000852 Ga0209050_100085232 289
349 3300025298 Ga0209050_1001962 Ga0209050_10019624 289
350 3300025299 Ga0209256_1000064 Ga0209256_10000646 289
351 3300025299 Ga0209256_1001123 Ga0209256_10011236 289
352 3300025302 Ga0207426_1000280 Ga0207426_10002806 289
353 3300025303 Ga0209051_1010996 Ga0209051_10109966 289
354 3300025304 Ga0209257_1002180 Ga0209257_10021806 289
355 3300025907 Ga0207645_10022751 Ga0207645_100227512 289
356 3300025923 Ga0207681_10202944 Ga0207681_102029442 289
357 3300025940 Ga0207691_10295453 Ga0207691_102954532 289
358 3300025941 Ga0207711_10207995 Ga0207711_102079952 289
359 3300025942 Ga0207689_10019275 Ga0207689_100192753 289
360 3300025960 Ga0207651_10144559 Ga0207651_101445591 289
361 3300025960 Ga0207651_10218984 Ga0207651_102189841 289
362 3300026023 Ga0207677_10078256 Ga0207677_100782562 289
363 3300026089 Ga0207648_10006778 Ga0207648_100067783 289
364 3300026089 Ga0207648_10069136 Ga0207648_100691362 289
365 3300026118 Ga0207675_100080456 Ga0207675_1000804562 289
366 3300026121 Ga0207683_10027211 Ga0207683_100272114 289
367 3300027111 Ga0209281_1000314 Ga0209281_100031459 289
368 3300027111 Ga0209281_1000463 Ga0209281_100046336 289
369 3300027666 Ga0209282_1000068 Ga0209282_100006859 289
370 3300028794 Ga0307515_10129528 Ga0307515_101295282 289
371 3300031456 Ga0307513_10187891 Ga0307513_101878912 289
372 3300031456 Ga0307513_10358399 Ga0307513_103583992 289
373 3300031548 Ga0307408_100184177 Ga0307408_1001841772 289
374 3300031911 Ga0307412_10084411 Ga0307412_100844112 289
375 3300031911 Ga0307412_10245998 Ga0307412_102459981 289
376 3300031967 Ga0315914_1014431 Ga0315914_10144312 289
377 3300031995 Ga0307409_100137283 Ga0307409_1001372832 289
378 3300033430 Ga0315913_1002536 Ga0315913_100253611 289
379 3300033464 Ga0315915_1000007 Ga0315915_1000007300 289
380 3300035207 Ga0373942_0054135 Ga0373942_0054135_69_1067 289
381 3300037471 Ga0395905_0021521 Ga0395905_0021521_4873_5832 289
382 3300037471 Ga0395905_0052630 Ga0395905_0052630_2730_3722 289
383 3300041404 Ga0439436_0017711 Ga0439436_0017711_446_1315 289
384 3300041413 Ga0439465_0039803 Ga0439465_0039803_549_1421 289
385 3300042007 Ga0439449_0017416 Ga0439449_0017416_121_990 289
386 3300042185 Ga0450909_004693 Ga0450909_004693_664_1533 289
387 3300044656 Ga0466969_0021565 Ga0466969_0021565_1280_2251 289
388 3300044684 Ga0466966_0014619 Ga0466966_0014619_220_1191 289
389 3300044693 Ga0466961_0039871 Ga0466961_0039871_745_1716 289
390 3300044735 Ga0466968_0088524 Ga0466968_0088524_308_1279 289
391 3300044765 Ga0466970_0017659 Ga0466970_0017659_864_1835 289
392 3300044842 Ga0466957_0011171 Ga0466957_0011171_4066_5037 289
393 3300045836 Ga0466958_0024256 Ga0466958_0024256_2548_3519 289
394 3300046471 Ga0495650_0083613 Ga0495650_0083613_42_1049 289
395 3300046474 Ga0495605_0070416 Ga0495605_0070416_109_1080 289
396 3300046491 Ga0495584_0000006 Ga0495584_0000006_28596_29573 289
397 3300046491 Ga0495584_0012199 Ga0495584_0012199_877_1854 289
398 3300046492 Ga0495585_0022052 Ga0495585_0022052_2200_3156 289
399 3300046492 Ga0495585_0034772 Ga0495585_0034772_237_1214 289
400 3300046506 Ga0495583_0000121 Ga0495583_0000121_117481_118458 289
401 3300046528 Ga0495642_0139327 Ga0495642_0139327_47_1024 289
402 3300046537 Ga0495598_0014352 Ga0495598_0014352_768_1751 289
403 3300046539 Ga0495621_0006234 Ga0495621_0006234_2153_3091 289
404 3300046660 Ga0495625_0185583 Ga0495625_0185583_87_1067 289
405 3300046674 Ga0495588_0007001 Ga0495588_0007001_337_1308 289
406 3300046684 Ga0495669_0000124 Ga0495669_0000124_25979_26935 289
407 3300046691 Ga0495670_0016136 Ga0495670_0016136_1035_2012 289
408 3300046694 Ga0495649_0089220 Ga0495649_0089220_658_1629 289
409 3300047323 Ga0495683_0076541 Ga0495683_0076541_545_1516 289
410 3300047443 Ga0495687_000005 Ga0495687_000005_327135_328106 289
411 3300047443 Ga0495687_000103 Ga0495687_000103_117668_118627 289
412 3300047443 Ga0495687_051206 Ga0495687_051206_139_1116 289
413 3300048904 Ga0496101_0212448 Ga0496101_0212448_455_1393 289
414 3300048905 Ga0496102_0021858 Ga0496102_0021858_4686_5633 289
415 3300048906 Ga0496103_0227663 Ga0496103_0227663_171_1118 289
416 3300048907 Ga0496104_0156345 Ga0496104_0156345_123_1061 289
417 3300048911 Ga0496108_0245208 Ga0496108_0245208_477_1415 289
418 3300048912 Ga0496109_0013744 Ga0496109_0013744_4676_5614 289
419 3300048912 Ga0496109_0136901 Ga0496109_0136901_153_1124 289
420 3300048913 Ga0496110_0036834 Ga0496110_0036834_598_1569 289
421 3300048914 Ga0496111_0016292 Ga0496111_0016292_4122_5060 289
422 3300048926 Ga0496123_0033375 Ga0496123_0033375_145_1125 289
423 3300049822 Ga0501035_0017880 Ga0501035_0017880_473_1408 289
424 3300049822 Ga0501035_0033120 Ga0501035_0033120_1579_2514 289
425 3300049823 Ga0501044_0001216 Ga0501044_0001216_16548_17483 289
426 3300050493 nmdc:mga0k408_32570_c1 nmdc:mga0k408_32570_c1_1262_2242 289
427 3300053087 Ga0500643_002465 Ga0500643_002465_8224_9135 289
428 3300053139 Ga0500568_0012436 Ga0500568_0012436_891_1802 289
429 iso_pu_bacteria 2738541307 2738882226 289

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00682

HMGL-like

HMGL-like

10

290

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ydn-assembly4.cif.gz_D crystal structure of the hmg-coa lyase from brucella melitensis, northeast structural genomics target lr35. 0.9916 6 286
1ydo-assembly1.cif.gz_A crystal structure of the bacillis subtilis hmg-coa lyase, northeast structural genomics target sr181. 0.985 7 281
1ydn-assembly4.cif.gz_D crystal structure of the hmg-coa lyase from brucella melitensis, northeast structural genomics target lr35. 0.9812 6 286
2cw6-assembly1.cif.gz_A crystal structure of human hmg-coa lyase: insights into catalysis and the molecular basis for hydroxymethylglutaric aciduria 0.9775 7 287
2ftp-assembly1.cif.gz_A crystal structure of hydroxymethylglutaryl-coa lyase from pseudomonas aeruginosa 0.9775 7 281
ID Description Score Start End Superfamily
af_Q0JNR8_151_451_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.988 7 281 3.20.20.70
1ydoB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.982 7 281 3.20.20.70
af_Q0JNR8_151_451_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9373 7 281 3.20.20.70
af_Q4DIQ4_8_322_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9247 8 285 3.20.20.70
af_Q4DFZ0_10_135_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9233 9 126 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A2W5NET4-F1-model_v4 Hydroxymethylglutaryl-CoA lyase 0.9965 7 288 GO:0004419
GO:0006552
GO:0046872
GO:0046951
AF-A0A358MIR0-F1-model_v4 Hydroxymethylglutaryl-CoA lyase 0.9961 32 231 GO:0004419
GO:0006552
GO:0046872
GO:0046951
AF-A0A7V3U4M4-F1-model_v4 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) 0.9959 7 187 GO:0004419
GO:0006552
GO:0046872
GO:0046951
AF-A0A3D4QHV9-F1-model_v4 Hydroxymethylglutaryl-CoA lyase 0.9951 62 241 GO:0004419
GO:0006552
GO:0046872
GO:0046951
AF-D0RL13-F1-model_v4 deleted 0.9945 7 287

Feature Viewer

pLDDT pTM Quality
93.84 0.92 High
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Predicted Structure (AlphaFold2)

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