F397791

General Info

Members Datasets Scaffolds Average Seq Length
304 219 242 345

Family's Representative Sequence

Representative Sequence 3300049574|Ga0501038_0214250|Ga0501038_0214250_215_1360
Length 381
Sequence VPLGFSMPCARAAAARSTVHAVRPDRRWGTLVVEVTMDPVEALDRIAFLLERSLAPTYRVRAFRTASRVLAALPAGEIGERADDGSLESLKGVGPKTAQVVREALAGQMPDYLRKLEDEAGAPPIGAGARLRALLRGDCHLHSDWSDGGSPIEEMGRAAAALGHEWAVLTDHSPRLTVARGLSPERLREQLDVVAELNAAWAPFRLLTGIECDILDDGSLDQEPELLERLDVVVVSVHSKLRMDARSMTRRMVAAVRNPHSDVLGHCTGRLVTGRGRPESEFDADAVFAACAETGTALEINSRPERLDPPRRLLRRAVDAGVLFSIDTDAHAPGQLDWQINGCARAEECEVPAERVVTTWSLNDLLSWTRERRTPEGVAGP

Samples

Sample ID Description Type Environment
1 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
2 2582580736 Prauserella sp. Am3 Isolate Unclassified
3 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
4 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
5 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
6 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
7 2643221548 Streptomyces sp. Root55 Isolate Unclassified
8 2643221578 Streptomyces sp. Root63 Isolate Unclassified
9 2643221647 Streptomyces sp. Root369 Isolate Unclassified
10 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
11 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
12 2643221714 Streptomyces sp. Root264 Isolate Unclassified
13 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
14 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
15 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
16 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
17 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
18 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
19 2808606448 Streptomyces sp. 193411 Isolate Unclassified
20 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
21 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
22 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
23 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
24 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
25 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
26 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
27 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
28 2867428634 Streptomyces sp. RP5T Isolate Unclassified
29 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
30 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
31 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
32 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
33 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
34 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
35 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
36 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
37 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
38 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
39 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
40 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
41 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
42 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
43 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
44 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
45 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
46 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
47 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
48 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
49 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
50 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
51 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
52 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
53 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
54 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
55 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
56 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
57 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
58 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
59 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
60 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
61 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
62 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
63 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
64 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
65 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
66 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
67 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
68 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
69 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
70 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
71 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
72 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
73 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
74 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
75 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
76 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
77 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
78 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
79 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
80 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
81 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
82 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
89 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
90 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
91 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
92 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
93 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
94 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
95 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
98 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
99 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
100 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
101 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
102 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
103 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
104 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
105 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
106 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
107 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
108 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
109 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
110 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
111 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
112 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
113 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
114 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
115 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
116 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
117 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
118 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
119 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
120 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
121 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
122 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
123 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
124 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
125 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
126 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
127 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
128 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
129 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
130 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
131 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
132 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
133 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
134 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
135 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
136 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
137 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
138 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
139 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
140 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
141 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
142 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
143 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
144 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
145 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
146 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
147 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
148 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
149 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
150 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
151 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
152 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
153 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
154 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
155 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
156 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
157 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
158 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
159 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
160 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
161 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
162 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
163 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
164 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
165 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
166 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
167 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
168 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
169 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
170 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
171 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
172 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
173 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
174 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
175 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
176 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
177 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
178 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
179 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
180 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
181 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
182 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
183 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
184 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
185 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
186 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
187 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
188 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
189 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
190 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
191 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
192 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
193 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
194 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
195 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
196 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
197 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
198 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
199 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
200 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
201 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
202 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
203 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
204 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
205 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
206 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
207 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
208 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
209 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
210 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
211 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
212 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
213 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
214 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
215 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
216 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
217 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
218 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
219 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 78.62
Metatranscriptomes 0.99
Isolates 20.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.95
Nodule 0.66
Rhizoplane 2.96
Rhizosphere 75.33
Stem 0
Stem Tuber 0
Unclassified 17.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10020958 3300002067 Bacteria 1999
2 JGI24738J21930_10014473 3300002075 Bacteria 1692
3 Ga0006562J51391_1081201 3300003578 Bacteria 2420
4 Ga0070681_10282020 3300005458 Bacteria 1572
5 Ga0070679_100192057 3300005530 Bacteria 2010
6 Ga0070696_100003269 3300005546 Bacteria 10810
7 Ga0068864_100050472 3300005618 Bacteria 3581
8 Ga0068863_100115770 3300005841 Bacteria 2554
9 Ga0081538_10022076 3300005981 Bacteria 4623
10 Ga0081539_10001700 3300005985 Bacteria 35488
11 Ga0075363_100032914 3300006048 Bacteria 2696
12 Ga0075367_10001005 3300006178 Bacteria 11580
13 Ga0075370_10010381 3300006353 Bacteria 4868
14 Ga0114129_10538908 3300009147 Bacteria 1519
15 Ga0105248_10181202 3300009177 Bacteria 2374
16 Ga0105238_10114215 3300009551 Bacteria 2680
17 Ga0105246_10015873 3300011119 Bacteria 4763
18 Ga0157369_10438863 3300013105 Bacteria 1353
19 Ga0163163_10178758 3300014325 Bacteria 2169
20 Ga0182008_10010771 3300014497 Bacteria 4886
21 Ga0182007_10011069 3300015262 Bacteria 3529
22 Ga0183367_1016 3300015688 Bacteria 290198
23 Ga0197907_11044302 3300020069 Bacteria 2153
24 Ga0224712_10001305 3300022467 Bacteria 5666
25 Ga0224572_1020097 3300024225 Bacteria 1282
26 Ga0207694_10262240 3300025924 Bacteria 1416
27 Ga0207687_10009432 3300025927 Bacteria 6384
28 Ga0207667_10207935 3300025949 Bacteria 2006
29 Ga0207641_10019137 3300026088 Bacteria 5616
30 Ga0207676_10161522 3300026095 Bacteria 1941
31 Ga0209371_1014180 3300027312 Bacteria 2196
32 Ga0307517_10019216 3300028786 Bacteria 8783
33 Ga0307515_10000475 3300028794 Bacteria 96024
34 Ga0268256_1021742 3300030500 Bacteria 1699
35 Ga0307511_10000059 3300030521 Bacteria 93044
36 Ga0307511_10000376 3300030521 Bacteria 47587
37 Ga0307511_10066854 3300030521 Bacteria 2674
38 Ga0307512_10038525 3300030522 Bacteria 4019
39 Ga0265327_10002610 3300031251 Bacteria 18627
40 Ga0307513_10014680 3300031456 Bacteria 9535
41 Ga0307513_10101663 3300031456 Bacteria 2896
42 Ga0307509_10005795 3300031507 Bacteria 16965
43 Ga0307509_10015346 3300031507 Bacteria 8941
44 Ga0307509_10074592 3300031507 Bacteria 3527
45 Ga0307408_100155546 3300031548 Bacteria 1810
46 Ga0307508_10002539 3300031616 Bacteria 19199
47 Ga0307508_10096355 3300031616 Bacteria 2550
48 Ga0307508_10178818 3300031616 Bacteria 1724
49 Ga0307514_10073386 3300031649 Bacteria 2559
50 Ga0307516_10007753 3300031730 Bacteria 12270
51 Ga0307516_10018620 3300031730 Bacteria 7212
52 Ga0307405_10002681 3300031731 Bacteria 7933
53 Ga0307518_10230155 3300031838 Bacteria 1200
54 Ga0307406_10041625 3300031901 Bacteria 2863
55 Ga0307409_100000472 3300031995 Bacteria 17188
56 Ga0307409_100248009 3300031995 Bacteria 1626
57 Ga0307416_100023654 3300032002 Bacteria 4464
58 Ga0307416_100419286 3300032002 Bacteria 1382
59 Ga0307415_100000014 3300032126 Bacteria 81236
60 Ga0307507_10012040 3300033179 Bacteria 10778
61 Ga0307507_10074601 3300033179 Bacteria 3041
62 Ga0307510_10004173 3300033180 Bacteria 16968
63 Ga0307510_10109134 3300033180 Bacteria 2518
64 Ga0373947_0000007 3300035725 Bacteria 192259
65 Ga0395899_0094055 3300037312 Bacteria 2169
66 Ga0395900_0478938 3300037418 Bacteria 1197
67 Ga0395898_0002748 3300037466 Bacteria 20290
68 Ga0395898_0019193 3300037466 Bacteria 6960
69 Ga0395901_0328576 3300038443 Bacteria 1581
70 Ga0400483_078170 3300039062 Bacteria 4071
71 Ga0400483_098810 3300039062 Bacteria 1109
72 Ga0400483_237628 3300039062 Bacteria 27779
73 Ga0436361_0909514 3300039447 Bacteria 2314
74 Ga0436362_0468666 3300039453 Bacteria 5756
75 Ga0439436_0000380 3300041404 Bacteria 11039
76 Ga0439436_0014516 3300041404 Bacteria 2375
77 Ga0439439_0004693 3300041406 Bacteria 3087
78 Ga0451853_0078909 3300041512 Bacteria 1843
79 Ga0439442_002231 3300042002 Bacteria 3810
80 Ga0439442_004366 3300042002 Bacteria 2807
81 Ga0439449_0001204 3300042007 Bacteria 10154
82 Ga0439457_000269 3300042014 Bacteria 14293
83 Ga0439457_000994 3300042014 Bacteria 8543
84 Ga0450894_000197 3300042131 Bacteria 10922
85 Ga0450903_000011 3300042138 Bacteria 34416
86 Ga0450906_000262 3300042145 Bacteria 10207
87 Ga0439458_0001175 3300042157 Bacteria 6653
88 Ga0439458_0022256 3300042157 Bacteria 1471
89 Ga0466972_0005565 3300044658 Bacteria 6308
90 Ga0466972_0031698 3300044658 Bacteria 2598
91 Ga0466965_0001033 3300044683 Bacteria 10780
92 Ga0466965_0087438 3300044683 Bacteria 1582
93 Ga0466966_0000641 3300044684 Bacteria 22267
94 Ga0466961_0070452 3300044693 Bacteria 2220
95 Ga0466961_0135005 3300044693 Bacteria 1546
96 Ga0466961_0175824 3300044693 Bacteria 1330
97 Ga0466963_0000692 3300044694 Bacteria 16395
98 Ga0466971_0000758 3300044719 Bacteria 12964
99 Ga0466970_0001881 3300044765 Bacteria 10154
100 Ga0466970_0007463 3300044765 Bacteria 5482
101 Ga0466970_0014810 3300044765 Bacteria 4009
102 Ga0466970_0063624 3300044765 Bacteria 1978
103 Ga0466957_0000294 3300044842 Bacteria 24478
104 Ga0466960_0001416 3300044901 Bacteria 8728
105 Ga0466960_0003891 3300044901 Bacteria 5792
106 Ga0466960_0141375 3300044901 Bacteria 1279
107 Ga0466959_0002183 3300045049 Bacteria 12443
108 Ga0466959_0110931 3300045049 Bacteria 1958
109 Ga0466958_0001953 3300045836 Bacteria 10120
110 Ga0466967_0013165 3300045976 Bacteria 6376
111 Ga0466967_0038261 3300045976 Bacteria 4112
112 Ga0495592_0041518 3300046454 Bacteria 3447
113 Ga0495603_0012028 3300046455 Bacteria 5238
114 Ga0495603_0022137 3300046455 Bacteria 3848
115 Ga0495629_0006987 3300046459 Bacteria 8319
116 Ga0495629_0007966 3300046459 Bacteria 7794
117 Ga0495629_0020245 3300046459 Bacteria 4751
118 Ga0495629_0029516 3300046459 Bacteria 3887
119 Ga0495629_0169075 3300046459 Bacteria 1518
120 Ga0495629_0173938 3300046459 Bacteria 1493
121 Ga0495651_0002033 3300046462 Bacteria 15624
122 Ga0495651_0143520 3300046462 Bacteria 1728
123 Ga0495582_0054787 3300046473 Bacteria 2198
124 Ga0495605_0047274 3300046474 Bacteria 2111
125 Ga0495662_0004349 3300046476 Bacteria 7113
126 Ga0495662_0008280 3300046476 Bacteria 5118
127 Ga0495662_0018903 3300046476 Bacteria 3335
128 Ga0495662_0079280 3300046476 Bacteria 1596
129 Ga0495594_0007539 3300046499 Bacteria 5600
130 Ga0495594_0039141 3300046499 Bacteria 2591
131 Ga0495594_0069328 3300046499 Bacteria 1959
132 Ga0495583_0028459 3300046506 Bacteria 2747
133 Ga0495606_0053371 3300046507 Bacteria 2623
134 Ga0495620_0001569 3300046515 Bacteria 13574
135 Ga0495628_0197135 3300046516 Bacteria 1518
136 Ga0495630_0029549 3300046517 Bacteria 4074
137 Ga0495643_0001463 3300046522 Bacteria 21632
138 Ga0495648_0049006 3300046524 Bacteria 2594
139 Ga0495666_0079805 3300046526 Bacteria 1549
140 Ga0495652_0126819 3300046529 Bacteria 2026
141 Ga0495640_0005352 3300046533 Bacteria 10208
142 Ga0495640_0142105 3300046533 Bacteria 1547
143 Ga0495587_0001939 3300046536 Bacteria 13781
144 Ga0495645_0030926 3300046543 Bacteria 3900
145 Ga0495622_0041183 3300046557 Bacteria 2148
146 Ga0495668_0026789 3300046616 Bacteria 3269
147 Ga0495635_0044360 3300046663 Bacteria 3068
148 Ga0495635_0253815 3300046663 Bacteria 1185
149 Ga0495588_0052234 3300046674 Bacteria 2106
150 Ga0495588_0053196 3300046674 Bacteria 2087
151 Ga0495657_0002040 3300046675 Bacteria 17207
152 Ga0495657_0006521 3300046675 Bacteria 9125
153 Ga0495646_0029635 3300046680 Bacteria 3420
154 Ga0495613_0002092 3300046689 Bacteria 15162
155 Ga0495613_0002875 3300046689 Bacteria 12889
156 Ga0495613_0039356 3300046689 Bacteria 3505
157 Ga0495613_0121679 3300046689 Bacteria 1874
158 Ga0495613_0259371 3300046689 Bacteria 1211
159 Ga0495671_0061085 3300046692 Bacteria 1859
160 Ga0495649_0020923 3300046694 Bacteria 3667
161 Ga0495649_0221671 3300046694 Bacteria 978
162 Ga0495589_0030427 3300046794 Bacteria 2718
163 Ga0495589_0034610 3300046794 Bacteria 2535
164 Ga0495600_0013919 3300046809 Bacteria 5068
165 Ga0495600_0168401 3300046809 Bacteria 1415
166 Ga0495581_0001226 3300047315 Bacteria 14140
167 Ga0495604_0001051 3300047317 Bacteria 22934
168 Ga0495604_0181793 3300047317 Bacteria 1470
169 Ga0495636_0002995 3300047318 Bacteria 6540
170 Ga0495676_0000607 3300047321 Bacteria 29631
171 Ga0495676_0001241 3300047321 Bacteria 21877
172 Ga0495676_0001327 3300047321 Bacteria 21204
173 Ga0495680_0023225 3300047322 Bacteria 5158
174 Ga0495687_001928 3300047443 Bacteria 17771
175 Ga0495687_004942 3300047443 Bacteria 8722
176 Ga0495687_037127 3300047443 Bacteria 2173
177 Ga0495675_0013904 3300047444 Bacteria 5089
178 Ga0495675_0047994 3300047444 Bacteria 2716
179 Ga0495685_064690 3300047447 Bacteria 1229
180 Ga0495593_0001421 3300047673 Bacteria 14046
181 Ga0495614_0000150 3300048089 Bacteria 25401
182 Ga0495614_0005673 3300048089 Bacteria 5625
183 Ga0495614_0007347 3300048089 Bacteria 4905
184 Ga0496105_0064245 3300048908 Bacteria 3028
185 Ga0496106_0212252 3300048909 Bacteria 1542
186 Ga0496108_0024757 3300048911 Bacteria 4943
187 Ga0496109_0170682 3300048912 Bacteria 2040
188 Ga0496110_0011439 3300048913 Bacteria 7263
189 Ga0496112_0056505 3300048915 Bacteria 3862
190 Ga0496113_0007188 3300048916 Bacteria 7135
191 Ga0496114_0021578 3300048917 Bacteria 5240
192 Ga0496114_0364148 3300048917 Bacteria 1279
193 Ga0501031_0131785 3300049568 Bacteria 1633
194 Ga0501033_0008633 3300049570 Bacteria 7886
195 Ga0501033_0011298 3300049570 Bacteria 6836
196 Ga0501033_0013588 3300049570 Bacteria 6197
197 Ga0501034_0016179 3300049571 Bacteria 7651
198 Ga0501034_0028975 3300049571 Bacteria 5631
199 Ga0501034_0042649 3300049571 Bacteria 4593
200 Ga0501034_0309320 3300049571 Bacteria 1515
201 Ga0501036_0006162 3300049572 Bacteria 9729
202 Ga0501036_0059168 3300049572 Bacteria 3246
203 Ga0501037_0071065 3300049573 Bacteria 2532
204 Ga0501038_0004406 3300049574 Bacteria 13096
205 Ga0501038_0050241 3300049574 Bacteria 3604
206 Ga0501038_0214250 3300049574 Bacteria 1539
207 Ga0501043_0016127 3300049579 Bacteria 5860
208 Ga0501043_0127752 3300049579 Bacteria 1993
209 Ga0501043_0163042 3300049579 Bacteria 1741
210 Ga0501043_0217481 3300049579 Bacteria 1479
211 Ga0501047_0003319 3300049581 Bacteria 15240
212 Ga0501047_0032989 3300049581 Bacteria 4999
213 Ga0501047_0431549 3300049581 Bacteria 1148
214 Ga0501068_0031051 3300049584 Bacteria 3172
215 Ga0501070_0011841 3300049586 Bacteria 7364
216 Ga0501070_0032061 3300049586 Bacteria 4399
217 Ga0501070_0087952 3300049586 Bacteria 2572
218 Ga0501070_0158152 3300049586 Bacteria 1869
219 Ga0501073_0123207 3300049589 Bacteria 1797
220 Ga0501080_0076258 3300049742 Bacteria 3118
221 Ga0501035_0010778 3300049822 Bacteria 8465
222 Ga0501035_0014484 3300049822 Bacteria 7278
223 Ga0501035_0014510 3300049822 Bacteria 7272
224 Ga0501044_0000894 3300049823 Bacteria 36014
225 Ga0501044_0006252 3300049823 Bacteria 13165
226 Ga0501044_0008766 3300049823 Bacteria 11062
227 Ga0501044_0017024 3300049823 Bacteria 7800
228 Ga0501044_0059890 3300049823 Bacteria 3900
229 Ga0501044_0586143 3300049823 Bacteria 1009
230 Ga0501045_0120471 3300049824 Bacteria 1948
231 nmdc:mga00v17_59277_c1 3300050491 Bacteria 2348
232 nmdc:mga06z11_1373_c1 3300050494 Bacteria 9014
233 Ga0495619_0071039 3300053085 Bacteria 2329
234 Ga0500646_0000645 3300053090 Bacteria 9978
235 Ga0500583_0042529 3300053092 Bacteria 2071
236 Ga0500640_000562 3300053095 Bacteria 9499
237 Ga0500553_052286 3300053101 Bacteria 1953
238 Ga0500572_012417 3300053111 Bacteria 2087
239 Ga0500588_0002148 3300053146 Bacteria 3945
240 Ga0500600_0108276 3300053149 Bacteria 1454
241 Ga0501082_0045085 3300060353 Bacteria 3803
242 Ga0466962_0000263 3300061719 Bacteria 22192

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053085 Ga0495619_0071039 Ga0495619_0071039_11_961 295
2 3300039453 Ga0436362_0468666 Ga0436362_0468666_3282_4229 311
3 3300049570 Ga0501033_0013588 Ga0501033_0013588_1049_2158 312
4 3300049571 Ga0501034_0042649 Ga0501034_0042649_2228_3337 312
5 3300049572 Ga0501036_0059168 Ga0501036_0059168_1674_2783 312
6 3300049573 Ga0501037_0071065 Ga0501037_0071065_518_1627 312
7 3300049574 Ga0501038_0004406 Ga0501038_0004406_3571_4680 312
8 3300049579 Ga0501043_0163042 Ga0501043_0163042_234_1343 312
9 3300049586 Ga0501070_0011841 Ga0501070_0011841_2570_3679 312
10 3300049823 Ga0501044_0008766 Ga0501044_0008766_3558_4667 312
11 3300049824 Ga0501045_0120471 Ga0501045_0120471_664_1773 312
12 3300046694 Ga0495649_0221671 Ga0495649_0221671_10_951 313
13 3300049823 Ga0501044_0586143 Ga0501044_0586143_27_968 313
14 3300005981 Ga0081538_10022076 Ga0081538_100220764 314
15 3300046459 Ga0495629_0169075 Ga0495629_0169075_218_1285 320
16 3300024225 Ga0224572_1020097 Ga0224572_10200972 327
17 3300032002 Ga0307416_100419286 Ga0307416_1004192861 327
18 3300046543 Ga0495645_0030926 Ga0495645_0030926_2836_3828 327
19 3300048917 Ga0496114_0021578 Ga0496114_0021578_3791_4783 327
20 3300048917 Ga0496114_0364148 Ga0496114_0364148_270_1262 327
21 3300050491 nmdc:mga00v17_59277_c1 nmdc:mga00v17_59277_c1_913_1905 328
22 iso_pu_bacteria 2643221714 2644627804 329
23 iso_pu_bacteria 2899359706 2899362519 329
24 3300005458 Ga0070681_10282020 Ga0070681_102820201 330
25 3300005618 Ga0068864_100050472 Ga0068864_1000504723 330
26 3300005841 Ga0068863_100115770 Ga0068863_1001157703 330
27 3300009177 Ga0105248_10181202 Ga0105248_101812022 330
28 3300014325 Ga0163163_10178758 Ga0163163_101787582 330
29 3300026088 Ga0207641_10019137 Ga0207641_100191376 330
30 3300026095 Ga0207676_10161522 Ga0207676_101615222 330
31 3300031995 Ga0307409_100248009 Ga0307409_1002480092 330
32 3300039062 Ga0400483_078170 Ga0400483_078170_1197_2234 330
33 3300039062 Ga0400483_237628 Ga0400483_237628_22810_23841 330
34 3300044901 Ga0466960_0003891 Ga0466960_0003891_2606_3604 330
35 3300048908 Ga0496105_0064245 Ga0496105_0064245_1525_2607 330
36 3300048911 Ga0496108_0024757 Ga0496108_0024757_3744_4826 330
37 3300048912 Ga0496109_0170682 Ga0496109_0170682_943_2025 330
38 3300048913 Ga0496110_0011439 Ga0496110_0011439_3892_4974 330
39 3300048915 Ga0496112_0056505 Ga0496112_0056505_2453_3535 330
40 3300048916 Ga0496113_0007188 Ga0496113_0007188_4844_5926 330
41 3300053090 Ga0500646_0000645 Ga0500646_0000645_4457_5524 330
42 3300053146 Ga0500588_0002148 Ga0500588_0002148_334_1401 330
43 iso_pu_bacteria 2875391855 2875398293 330
44 iso_pu_bacteria 2946045630 2946045981 330
45 iso_pu_bacteria 2990088156 2990088792 330
46 iso_pu_bacteria 8056667051 8056670042 330
47 3300031507 Ga0307509_10015346 Ga0307509_100153465 331
48 3300031901 Ga0307406_10041625 Ga0307406_100416253 331
49 3300009147 Ga0114129_10538908 Ga0114129_105389081 332
50 3300031456 Ga0307513_10014680 Ga0307513_100146805 332
51 3300035725 Ga0373947_0000007 Ga0373947_0000007_49634_50671 332
52 3300039062 Ga0400483_098810 Ga0400483_098810_42_1079 332
53 iso_pu_bacteria 2582581314 2585315099 332
54 3300046459 Ga0495629_0020245 Ga0495629_0020245_3095_4096 333
55 3300046689 Ga0495613_0002875 Ga0495613_0002875_2231_3232 333
56 3300047321 Ga0495676_0001241 Ga0495676_0001241_8113_9114 333
57 3300048089 Ga0495614_0000150 Ga0495614_0000150_19290_20291 333
58 3300048909 Ga0496106_0212252 Ga0496106_0212252_478_1479 333
59 3300030521 Ga0307511_10000059 Ga0307511_1000005966 334
60 3300031548 Ga0307408_100155546 Ga0307408_1001555461 334
61 3300031731 Ga0307405_10002681 Ga0307405_100026817 334
62 3300031995 Ga0307409_100000472 Ga0307409_10000047218 334
63 3300032002 Ga0307416_100023654 Ga0307416_1000236544 334
64 3300032126 Ga0307415_100000014 Ga0307415_10000001461 334
65 iso_pu_bacteria 2643221548 2643760716 334
66 iso_pu_bacteria 2643221578 2643901083 334
67 iso_pu_bacteria 2643221673 2644407227 334
68 3300013105 Ga0157369_10438863 Ga0157369_104388632 335
69 3300025949 Ga0207667_10207935 Ga0207667_102079352 335
70 3300030500 Ga0268256_1021742 Ga0268256_10217422 335
71 3300038443 Ga0395901_0328576 Ga0395901_0328576_164_1177 335
72 3300039447 Ga0436361_0909514 Ga0436361_0909514_297_1319 335
73 3300046455 Ga0495603_0012028 Ga0495603_0012028_1058_2065 335
74 3300046459 Ga0495629_0006987 Ga0495629_0006987_3455_4462 335
75 3300046499 Ga0495594_0007539 Ga0495594_0007539_615_1622 335
76 3300046557 Ga0495622_0041183 Ga0495622_0041183_410_1417 335
77 3300047321 Ga0495676_0000607 Ga0495676_0000607_14664_15671 335
78 iso_pu_bacteria 2966598605 2966598987 335
79 3300020069 Ga0197907_11044302 Ga0197907_110443022 336
80 3300022467 Ga0224712_10001305 Ga0224712_100013053 336
81 3300028786 Ga0307517_10019216 Ga0307517_100192165 336
82 3300028794 Ga0307515_10000475 Ga0307515_1000047520 336
83 3300030521 Ga0307511_10000376 Ga0307511_1000037610 336
84 3300030521 Ga0307511_10066854 Ga0307511_100668542 336
85 3300031251 Ga0265327_10002610 Ga0265327_1000261010 336
86 3300031456 Ga0307513_10101663 Ga0307513_101016633 336
87 3300031507 Ga0307509_10005795 Ga0307509_100057952 336
88 3300031507 Ga0307509_10074592 Ga0307509_100745922 336
89 3300031616 Ga0307508_10096355 Ga0307508_100963551 336
90 3300031616 Ga0307508_10178818 Ga0307508_101788181 336
91 3300031649 Ga0307514_10073386 Ga0307514_100733862 336
92 3300031730 Ga0307516_10018620 Ga0307516_100186207 336
93 3300031838 Ga0307518_10230155 Ga0307518_102301551 336
94 3300033179 Ga0307507_10012040 Ga0307507_100120407 336
95 3300033180 Ga0307510_10004173 Ga0307510_1000417313 336
96 3300033180 Ga0307510_10109134 Ga0307510_101091343 336
97 3300041404 Ga0439436_0014516 Ga0439436_0014516_817_1884 336
98 3300042014 Ga0439457_000269 Ga0439457_000269_4325_5392 336
99 3300044693 Ga0466961_0135005 Ga0466961_0135005_139_1164 336
100 3300044765 Ga0466970_0063624 Ga0466970_0063624_159_1169 336
101 3300046459 Ga0495629_0007966 Ga0495629_0007966_219_1241 336
102 3300046462 Ga0495651_0002033 Ga0495651_0002033_12628_13650 336
103 3300046473 Ga0495582_0054787 Ga0495582_0054787_461_1483 336
104 3300046476 Ga0495662_0004349 Ga0495662_0004349_1242_2264 336
105 3300046499 Ga0495594_0069328 Ga0495594_0069328_745_1767 336
106 3300046517 Ga0495630_0029549 Ga0495630_0029549_1621_2643 336
107 3300046526 Ga0495666_0079805 Ga0495666_0079805_437_1459 336
108 3300046533 Ga0495640_0142105 Ga0495640_0142105_279_1301 336
109 3300046536 Ga0495587_0001939 Ga0495587_0001939_4971_5993 336
110 3300046674 Ga0495588_0053196 Ga0495588_0053196_894_1916 336
111 3300046675 Ga0495657_0002040 Ga0495657_0002040_4298_5320 336
112 3300046680 Ga0495646_0029635 Ga0495646_0029635_1774_2796 336
113 3300046689 Ga0495613_0002092 Ga0495613_0002092_6899_7921 336
114 3300046689 Ga0495613_0121679 Ga0495613_0121679_98_1120 336
115 3300046692 Ga0495671_0061085 Ga0495671_0061085_435_1457 336
116 3300046809 Ga0495600_0013919 Ga0495600_0013919_3183_4205 336
117 3300047315 Ga0495581_0001226 Ga0495581_0001226_8931_9953 336
118 3300047317 Ga0495604_0001051 Ga0495604_0001051_5045_6067 336
119 3300047321 Ga0495676_0001327 Ga0495676_0001327_16765_17787 336
120 3300047443 Ga0495687_001928 Ga0495687_001928_11496_12518 336
121 3300047443 Ga0495687_037127 Ga0495687_037127_713_1723 336
122 3300047444 Ga0495675_0013904 Ga0495675_0013904_2981_4003 336
123 3300047673 Ga0495593_0001421 Ga0495593_0001421_12137_13159 336
124 3300048089 Ga0495614_0005673 Ga0495614_0005673_3113_4135 336
125 3300048089 Ga0495614_0007347 Ga0495614_0007347_2277_3299 336
126 3300053092 Ga0500583_0042529 Ga0500583_0042529_685_1707 336
127 3300053095 Ga0500640_000562 Ga0500640_000562_787_1809 336
128 3300053101 Ga0500553_052286 Ga0500553_052286_607_1629 336
129 3300053111 Ga0500572_012417 Ga0500572_012417_328_1350 336
130 3300030522 Ga0307512_10038525 Ga0307512_100385253 337
131 3300033179 Ga0307507_10074601 Ga0307507_100746013 337
132 3300037312 Ga0395899_0094055 Ga0395899_0094055_340_1398 337
133 3300049571 Ga0501034_0309320 Ga0501034_0309320_176_1282 337
134 3300049822 Ga0501035_0010778 Ga0501035_0010778_6320_7426 337
135 3300049823 Ga0501044_0017024 Ga0501044_0017024_5655_6761 337
136 3300005530 Ga0070679_100192057 Ga0070679_1001920572 338
137 3300005546 Ga0070696_100003269 Ga0070696_1000032696 338
138 3300060353 Ga0501082_0045085 Ga0501082_0045085_1204_2241 338
139 iso_pu_bacteria 2862290372 2862294947 338
140 iso_pu_bacteria 2873151551 2873152053 338
141 iso_pu_bacteria 2912715099 2912715627 338
142 3300025927 Ga0207687_10009432 Ga0207687_100094325 339
143 3300044765 Ga0466970_0007463 Ga0466970_0007463_1981_3000 339
144 3300046455 Ga0495603_0022137 Ga0495603_0022137_1378_2397 339
145 3300046459 Ga0495629_0029516 Ga0495629_0029516_420_1439 339
146 3300046476 Ga0495662_0008280 Ga0495662_0008280_309_1328 339
147 3300046476 Ga0495662_0018903 Ga0495662_0018903_2121_3140 339
148 3300046499 Ga0495594_0039141 Ga0495594_0039141_107_1126 339
149 3300046663 Ga0495635_0253815 Ga0495635_0253815_43_1062 339
150 3300046674 Ga0495588_0052234 Ga0495588_0052234_384_1403 339
151 3300046675 Ga0495657_0006521 Ga0495657_0006521_5343_6362 339
152 3300046689 Ga0495613_0259371 Ga0495613_0259371_45_1064 339
153 3300046809 Ga0495600_0168401 Ga0495600_0168401_371_1390 339
154 3300047444 Ga0495675_0047994 Ga0495675_0047994_1223_2242 339
155 iso_pu_bacteria 2547132111 2547409310 339
156 iso_pu_bacteria 2784132148 2784592270 339
157 iso_pu_bacteria 2808606448 2809235914 339
158 3300005985 Ga0081539_10001700 Ga0081539_100017009 340
159 iso_pu_bacteria 2582580736 2583150800 340
160 iso_pu_bacteria 2616644941 2616899653 340
161 iso_pu_bacteria 2862382967 2862383114 340
162 iso_pu_bacteria 8008558824 8008564675 340
163 3300045049 Ga0466959_0110931 Ga0466959_0110931_721_1758 341
164 iso_pu_bacteria 2582581313 2585303324 341
165 iso_pu_bacteria 2616644814 2616696225 341
166 iso_pu_bacteria 2784746763 2785339307 341
167 iso_pu_bacteria 2784746768 2785374155 341
168 iso_pu_bacteria 2786546132 2786674392 341
169 iso_pu_bacteria 2811994879 2812353931 341
170 iso_pu_bacteria 2811994917 2812483051 341
171 iso_pu_bacteria 2852635781 2852639123 341
172 iso_pu_bacteria 2862178590 2862180878 341
173 iso_pu_bacteria 2862281513 2862282764 341
174 iso_pu_bacteria 2867428634 2867429200 341
175 iso_pu_bacteria 2877676314 2877677321 341
176 iso_pu_bacteria 2912723979 2912728439 341
177 iso_pu_bacteria 2946064051 2946071764 341
178 iso_pu_bacteria 2954673503 2954681014 341
179 iso_pu_bacteria 2954682443 2954683143 341
180 iso_pu_bacteria 2954691527 2954692871 341
181 iso_pu_bacteria 2954701450 2954707944 341
182 iso_pu_bacteria 2954711539 2954712500 341
183 iso_pu_bacteria 2954721474 2954722455 341
184 iso_pu_bacteria 2954731030 2954739402 341
185 iso_pu_bacteria 2954740390 2954741333 341
186 iso_pu_bacteria 2954749733 2954758230 341
187 iso_pu_bacteria 2954759201 2954760350 341
188 iso_pu_bacteria 2990059506 2990064389 341
189 iso_pu_bacteria 3006493962 3006495765 341
190 iso_pu_bacteria 8008574985 8008575574 341
191 iso_pu_bacteria 8048406513 8048411252 341
192 iso_pu_bacteria 8056829672 8056832325 341
193 3300009551 Ga0105238_10114215 Ga0105238_101142151 342
194 3300025924 Ga0207694_10262240 Ga0207694_102622401 342
195 iso_pu_bacteria 2643221678 2644440651 342
196 iso_pu_bacteria 2808606359 2808845682 342
197 iso_pu_bacteria 2808606375 2808915487 342
198 iso_pu_bacteria 2863404153 2863410644 342
199 iso_pu_bacteria 2919468124 2919472974 342
200 iso_pu_bacteria 2946072368 2946079538 342
201 iso_pu_bacteria 3006393351 3006396456 342
202 iso_pu_bacteria 3006486233 3006493440 342
203 3300044658 Ga0466972_0005565 Ga0466972_0005565_3694_4728 343
204 3300044765 Ga0466970_0014810 Ga0466970_0014810_1508_2542 343
205 3300044901 Ga0466960_0001416 Ga0466960_0001416_2146_3180 343
206 iso_pu_bacteria 2954002825 2954009316 343
207 iso_pu_bacteria 8023623736 8023626569 343
208 3300044683 Ga0466965_0001033 Ga0466965_0001033_2413_3450 344
209 3300044684 Ga0466966_0000641 Ga0466966_0000641_8807_9844 344
210 3300044694 Ga0466963_0000692 Ga0466963_0000692_170_1207 344
211 3300044719 Ga0466971_0000758 Ga0466971_0000758_903_1940 344
212 3300044765 Ga0466970_0001881 Ga0466970_0001881_8205_9242 344
213 3300044842 Ga0466957_0000294 Ga0466957_0000294_11119_12156 344
214 3300045049 Ga0466959_0002183 Ga0466959_0002183_5169_6206 344
215 3300045836 Ga0466958_0001953 Ga0466958_0001953_879_1916 344
216 3300045976 Ga0466967_0013165 Ga0466967_0013165_4491_5528 344
217 3300061719 Ga0466962_0000263 Ga0466962_0000263_13645_14682 344
218 3300003578 Ga0006562J51391_1081201 Ga0006562J51391_10812012 345
219 3300006048 Ga0075363_100032914 Ga0075363_1000329142 345
220 3300006353 Ga0075370_10010381 Ga0075370_100103814 345
221 3300015688 Ga0183367_1016 Ga0183367_1016106 345
222 3300027312 Ga0209371_1014180 Ga0209371_10141802 345
223 3300031616 Ga0307508_10002539 Ga0307508_1000253911 345
224 3300031730 Ga0307516_10007753 Ga0307516_1000775311 345
225 3300037418 Ga0395900_0478938 Ga0395900_0478938_121_1164 345
226 3300037466 Ga0395898_0002748 Ga0395898_0002748_16892_17935 345
227 3300037466 Ga0395898_0019193 Ga0395898_0019193_1620_2657 345
228 3300041404 Ga0439436_0000380 Ga0439436_0000380_4851_5891 345
229 3300041406 Ga0439439_0004693 Ga0439439_0004693_1893_2933 345
230 3300041512 Ga0451853_0078909 Ga0451853_0078909_313_1362 345
231 3300042002 Ga0439442_002231 Ga0439442_002231_1923_2963 345
232 3300042002 Ga0439442_004366 Ga0439442_004366_1207_2247 345
233 3300042007 Ga0439449_0001204 Ga0439449_0001204_307_1344 345
234 3300042014 Ga0439457_000994 Ga0439457_000994_199_1239 345
235 3300042131 Ga0450894_000197 Ga0450894_000197_3508_4557 345
236 3300042138 Ga0450903_000011 Ga0450903_000011_30293_31330 345
237 3300042145 Ga0450906_000262 Ga0450906_000262_1258_2307 345
238 3300042157 Ga0439458_0001175 Ga0439458_0001175_160_1197 345
239 3300044658 Ga0466972_0031698 Ga0466972_0031698_852_1913 345
240 3300044683 Ga0466965_0087438 Ga0466965_0087438_60_1100 345
241 3300044693 Ga0466961_0070452 Ga0466961_0070452_932_1975 345
242 3300044693 Ga0466961_0175824 Ga0466961_0175824_68_1129 345
243 3300045976 Ga0466967_0038261 Ga0466967_0038261_1953_2993 345
244 3300046454 Ga0495592_0041518 Ga0495592_0041518_1904_2947 345
245 3300046459 Ga0495629_0173938 Ga0495629_0173938_433_1470 345
246 3300046462 Ga0495651_0143520 Ga0495651_0143520_531_1574 345
247 3300046474 Ga0495605_0047274 Ga0495605_0047274_944_1981 345
248 3300046476 Ga0495662_0079280 Ga0495662_0079280_225_1262 345
249 3300046506 Ga0495583_0028459 Ga0495583_0028459_998_2035 345
250 3300046507 Ga0495606_0053371 Ga0495606_0053371_981_2018 345
251 3300046515 Ga0495620_0001569 Ga0495620_0001569_809_1846 345
252 3300046516 Ga0495628_0197135 Ga0495628_0197135_20_1063 345
253 3300046522 Ga0495643_0001463 Ga0495643_0001463_3341_4378 345
254 3300046524 Ga0495648_0049006 Ga0495648_0049006_937_1974 345
255 3300046529 Ga0495652_0126819 Ga0495652_0126819_462_1550 345
256 3300046533 Ga0495640_0005352 Ga0495640_0005352_797_1834 345
257 3300046616 Ga0495668_0026789 Ga0495668_0026789_212_1249 345
258 3300046663 Ga0495635_0044360 Ga0495635_0044360_1288_2331 345
259 3300046689 Ga0495613_0039356 Ga0495613_0039356_559_1596 345
260 3300046694 Ga0495649_0020923 Ga0495649_0020923_1819_2856 345
261 3300046794 Ga0495589_0030427 Ga0495589_0030427_908_1945 345
262 3300046794 Ga0495589_0034610 Ga0495589_0034610_56_1093 345
263 3300047317 Ga0495604_0181793 Ga0495604_0181793_211_1248 345
264 3300047318 Ga0495636_0002995 Ga0495636_0002995_3697_4734 345
265 3300047322 Ga0495680_0023225 Ga0495680_0023225_3639_4682 345
266 3300047443 Ga0495687_004942 Ga0495687_004942_3165_4202 345
267 3300047447 Ga0495685_064690 Ga0495685_064690_139_1176 345
268 3300049568 Ga0501031_0131785 Ga0501031_0131785_542_1579 345
269 3300049570 Ga0501033_0008633 Ga0501033_0008633_3465_4508 345
270 3300049570 Ga0501033_0011298 Ga0501033_0011298_170_1252 345
271 3300049571 Ga0501034_0016179 Ga0501034_0016179_1033_2115 345
272 3300049571 Ga0501034_0028975 Ga0501034_0028975_2858_3895 345
273 3300049572 Ga0501036_0006162 Ga0501036_0006162_3966_5048 345
274 3300049574 Ga0501038_0050241 Ga0501038_0050241_878_1915 345
275 3300049574 Ga0501038_0214250 Ga0501038_0214250_215_1360 345
276 3300049579 Ga0501043_0016127 Ga0501043_0016127_4582_5664 345
277 3300049579 Ga0501043_0127752 Ga0501043_0127752_30_1067 345
278 3300049579 Ga0501043_0217481 Ga0501043_0217481_137_1219 345
279 3300049581 Ga0501047_0003319 Ga0501047_0003319_12648_13685 345
280 3300049581 Ga0501047_0032989 Ga0501047_0032989_887_1969 345
281 3300049581 Ga0501047_0431549 Ga0501047_0431549_15_1097 345
282 3300049584 Ga0501068_0031051 Ga0501068_0031051_1422_2504 345
283 3300049586 Ga0501070_0032061 Ga0501070_0032061_3097_4179 345
284 3300049586 Ga0501070_0087952 Ga0501070_0087952_179_1219 345
285 3300049586 Ga0501070_0158152 Ga0501070_0158152_440_1489 345
286 3300049589 Ga0501073_0123207 Ga0501073_0123207_69_1214 345
287 3300049742 Ga0501080_0076258 Ga0501080_0076258_1967_3004 345
288 3300049822 Ga0501035_0014484 Ga0501035_0014484_4810_5892 345
289 3300049822 Ga0501035_0014510 Ga0501035_0014510_2921_3964 345
290 3300049823 Ga0501044_0000894 Ga0501044_0000894_19561_20601 345
291 3300049823 Ga0501044_0006252 Ga0501044_0006252_2925_3962 345
292 3300049823 Ga0501044_0059890 Ga0501044_0059890_2586_3623 345
293 3300053149 Ga0500600_0108276 Ga0500600_0108276_44_1081 345
294 iso_pu_bacteria 2643221647 2644266728 345
295 iso_pu_bacteria 2954380949 2954382058 345
296 3300002067 JGI24735J21928_10020958 JGI24735J21928_100209582 346
297 3300002075 JGI24738J21930_10014473 JGI24738J21930_100144732 346
298 3300006178 Ga0075367_10001005 Ga0075367_1000100511 346
299 3300011119 Ga0105246_10015873 Ga0105246_100158732 346
300 3300014497 Ga0182008_10010771 Ga0182008_100107713 346
301 3300015262 Ga0182007_10011069 Ga0182007_100110694 346
302 3300042157 Ga0439458_0022256 Ga0439458_0022256_165_1268 346
303 3300044901 Ga0466960_0141375 Ga0466960_0141375_81_1121 346
304 3300050494 nmdc:mga06z11_1373_c1 nmdc:mga06z11_1373_c1_3267_4370 346

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14716

HHH_8

Helix-hairpin-helix domain

37

106

0.94

PF02811

PHP

PHP domain

138

303

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
1m65-assembly1.cif.gz_A ycdx protein 0.8389 101 340
1m65-assembly1.cif.gz_A ycdx protein 0.8051 101 340
1pb0-assembly1.cif.gz_C ycdx protein in autoinhibited state 0.7836 101 341
3au6-assembly1.cif.gz_A dna polymerase x from thermus thermophilus hb8 ternary complex with primer/template dna and ddgtp 0.773 39 336
3b0y-assembly1.cif.gz_A k263d mutant of polx from thermus thermophilus hb8 complexed with ca-dgtp 0.7647 39 340
ID Description Score Start End Superfamily
af_P96221_92_335_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9934 97 336 3.20.20.140
af_P96221_92_335_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9732 97 336 3.20.20.140
3au6A05 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.971 98 336 3.20.20.140
af_Q2FZD4_322_570_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9609 98 339 3.20.20.140
af_P96221_3_82_1.10.150.110 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;DNA polymerase beta, N-terminal domain-like 0.9514 4 81 1.10.150.110
ID Description Score Start End GO Terms
AF-A0A7K2VT76-F1-model_v4 PHP domain-containing protein 0.9962 153 341 GO:0005829
GO:0008270
GO:0042578
AF-A0A7C3P2M9-F1-model_v4 PHP domain-containing protein 0.9949 96 318 GO:0005829
GO:0008270
GO:0042578
AF-A0A7Y6LUU1-F1-model_v4 PHP domain-containing protein 0.9941 191 334 GO:0005829
GO:0008270
GO:0042578
AF-A0A7K2Q525-F1-model_v4 PHP domain-containing protein 0.9927 99 346 GO:0005829
GO:0008270
GO:0042578
AF-D9WHE5-F1-model_v4 X family DNA polymerase 0.9919 92 342 GO:0005829
GO:0008270
GO:0042578

Feature Viewer

pLDDT pTM Quality
94.28 0.91 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map