F387707

General Info

Members Datasets Scaffolds Average Seq Length
286 241 279 316

Family's Representative Sequence

Representative Sequence 3300053121|Ga0500607_001536|Ga0500607_001536_8385_9509
Length 374
Sequence MATSSISKPKASLAIIDDYFNTSAPHFGLIPPSELQIITFNDTIVPVNEVEDARLVERLQPFDMISTIRERTAFPGSLLRRLPNLKLLLATGTQFERFDLATAKELGITVVAAPGLGRTDQGGVQRPSIKKGNVHPTTQHTWALLLALARNVAVDDAAIKTGTGWQSGLATSLPTQTLGIVGLGRLGAAVARVAHLWWGMKVMCWSENLTQQKADQMAVAMGLPFENAESPGEKTFQAVSKEELFRNADVVSMHYVLSDRSRSIVGRRELELMKKSAFLVNTSRGPLIDQDALVDALEKGQIRGAALDVFEIEPLPSDSPWRRSNYWGRDGRSAVLTTPHMGYVDEGLMNTWYAESAENVERWLRGQDVLRRLA

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
3 2738541283 Pedobacter sp. OK701 Isolate Unclassified
4 2738541284 Pedobacter sp. YR016 Isolate Unclassified
5 2738543023 Pedobacter sp. OK628 Isolate Unclassified
6 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
7 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
8 2883577096 Roseococcus sp. SYP-B2431 Isolate Rhizosphere
9 2935883170 Bradyrhizobium sp. S3.12.5 Isolate Nodule
10 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
11 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
12 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
13 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
14 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
15 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
16 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
17 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
18 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
19 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
20 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
21 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
22 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
23 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
24 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
25 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
26 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
27 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
28 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
29 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
30 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
31 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
32 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
33 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
34 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
35 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
36 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
37 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
38 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
39 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
40 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
41 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
42 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
43 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
44 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
45 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
46 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
47 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
48 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
49 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
50 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
51 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
52 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
53 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
54 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
55 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
56 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
57 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
58 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
60 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
61 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
62 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
63 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
65 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
67 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
68 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
69 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
70 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
71 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
72 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
73 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
74 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
75 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
76 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
77 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
78 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
79 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
80 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
81 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
82 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
83 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
84 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
85 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
86 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
87 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
88 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
127 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
128 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
129 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
130 3300031828 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Unclassified
131 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
132 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
133 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
134 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
135 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
136 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
137 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
138 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
139 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
140 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
141 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
142 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
143 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
144 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
145 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
146 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
147 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
148 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
149 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
150 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
151 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
152 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
153 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
154 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
155 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
156 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
157 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
158 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
159 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
160 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
161 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
162 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
163 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
164 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
165 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
166 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
167 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
168 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
169 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
170 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
171 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
172 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
173 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
174 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
175 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
176 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
177 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
178 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
179 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
180 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
181 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
182 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
183 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
184 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
185 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
186 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
187 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
188 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
189 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
190 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
191 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
192 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
193 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
194 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
195 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
196 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
197 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
198 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
199 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
200 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
201 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
202 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
203 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
204 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
205 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
206 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
207 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
208 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
209 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
210 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
211 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
212 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
213 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
214 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
215 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
216 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
217 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
218 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
219 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
220 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
221 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
222 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
223 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
224 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
225 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
226 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
227 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
228 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
229 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
230 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
231 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
232 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
233 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
234 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
235 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
236 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
237 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
238 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
239 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
240 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
241 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.5
Metatranscriptomes 0.7
Isolates 2.8

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.55
Nodule 0.35
Rhizoplane 4.55
Rhizosphere 84.62
Stem 0
Stem Tuber 0
Unclassified 5.94

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_116274 2162886007 Bacteria 23863
2 JGI25162J39368_1000688 3300002737 Bacteria 23552
3 JGI25164J39214_1001281 3300002772 Bacteria 6443
4 JGI25165J46597_1000846 3300003214 Bacteria 22324
5 rootH2_10025281 3300003320 Bacteria 3095
6 rootH1_10001276 3300003316 Bacteria 3262
7 rootH1_10001276 3300003323 Bacteria 38627
8 JGI25404J52841_10000659 3300003659 Bacteria 5260
9 Ga0065714_10064455 3300005288 Bacteria 72722
10 Ga0065714_10071478 3300005288 Bacteria 3563
11 Ga0065704_10000193 3300005289 Bacteria 203271
12 Ga0065715_10032744 3300005293 Bacteria 1299
13 Ga0070658_10000677 3300005327 Bacteria 29445
14 Ga0070658_10029994 3300005327 Bacteria 4370
15 Ga0070658_10284729 3300005327 Bacteria 1407
16 Ga0068869_100139229 3300005334 Bacteria 1872
17 Ga0070680_100034941 3300005336 Bacteria 4055
18 Ga0070689_100337547 3300005340 Bacteria 1262
19 Ga0070691_10084470 3300005341 Bacteria 1558
20 Ga0070661_100088523 3300005344 Bacteria 2292
21 Ga0070668_100011266 3300005347 Bacteria 6658
22 Ga0070669_100147597 3300005353 Bacteria 1818
23 Ga0070669_100378539 3300005353 Bacteria 1154
24 Ga0070671_100124432 3300005355 Bacteria 2170
25 Ga0070659_100026372 3300005366 Bacteria 4471
26 Ga0070667_100009466 3300005367 Bacteria 8081
27 Ga0070709_10012049 3300005434 Bacteria 4834
28 Ga0070714_100014154 3300005435 Bacteria 6405
29 Ga0070713_100013382 3300005436 Bacteria 6056
30 Ga0070713_100138634 3300005436 Bacteria 2152
31 Ga0070710_10000417 3300005437 Bacteria 19992
32 Ga0070710_10060199 3300005437 Bacteria 2159
33 Ga0070711_100003647 3300005439 Bacteria 8999
34 Ga0070705_100002509 3300005440 Bacteria 9223
35 Ga0070705_100089076 3300005440 Bacteria 1917
36 Ga0070708_100003129 3300005445 Bacteria 12883
37 Ga0070685_10079376 3300005466 Bacteria 1964
38 Ga0070706_100068265 3300005467 Bacteria 3287
39 Ga0070706_100336954 3300005467 Bacteria 1406
40 Ga0070707_100017995 3300005468 Bacteria 6647
41 Ga0070699_100006901 3300005518 Bacteria 9874
42 Ga0070684_100020641 3300005535 Bacteria 5464
43 Ga0070697_100011518 3300005536 Bacteria 6913
44 Ga0068853_100307647 3300005539 Bacteria 1466
45 Ga0070672_100049228 3300005543 Bacteria 3277
46 Ga0070665_100062325 3300005548 Bacteria 3739
47 Ga0070665_100130639 3300005548 Bacteria 2514
48 Ga0068855_100018734 3300005563 Bacteria 8323
49 Ga0068855_100088478 3300005563 Bacteria 3577
50 Ga0068857_100025516 3300005577 Bacteria 5203
51 Ga0070702_100021644 3300005615 Bacteria 3387
52 Ga0068864_100063128 3300005618 Bacteria 3210
53 Ga0068870_10038922 3300005840 Bacteria 2458
54 Ga0068863_100014919 3300005841 Bacteria 7462
55 Ga0068863_100063912 3300005841 Bacteria 3481
56 Ga0068863_100080496 3300005841 Bacteria 3085
57 Ga0068863_100156550 3300005841 Bacteria 2182
58 Ga0068858_100129199 3300005842 Bacteria 2368
59 Ga0068860_100003306 3300005843 Bacteria 16588
60 Ga0068860_100162308 3300005843 Bacteria 2155
61 Ga0068860_100212357 3300005843 Bacteria 1877
62 Ga0068862_100000366 3300005844 Bacteria 49032
63 Ga0081540_1000769 3300005983 Bacteria 29441
64 Ga0070715_10092822 3300006163 Bacteria 1392
65 Ga0070716_100008527 3300006173 Bacteria 5090
66 Ga0097621_100067752 3300006237 Bacteria 2942
67 Ga0068871_100152940 3300006358 Bacteria 1968
68 Ga0075434_100044764 3300006871 Bacteria 4389
69 Ga0075436_100025181 3300006914 Bacteria 4092
70 Ga0075436_100128822 3300006914 Bacteria 1774
71 Ga0075435_100006328 3300007076 Bacteria 8362
72 Ga0111539_10097737 3300009094 Bacteria 3449
73 Ga0111539_10342534 3300009094 Bacteria 1740
74 Ga0105245_10012688 3300009098 Bacteria 7337
75 Ga0114129_10579458 3300009147 Bacteria 1456
76 Ga0105241_10036591 3300009174 Bacteria 3695
77 Ga0105242_10098412 3300009176 Bacteria 2474
78 Ga0105248_10021087 3300009177 Bacteria 7220
79 Ga0105249_10000916 3300009553 Bacteria 26081
80 Ga0105249_10024803 3300009553 Bacteria 5393
81 Ga0099796_10004727 3300010159 Bacteria 3327
82 Ga0105246_10023873 3300011119 Bacteria 3963
83 Ga0157373_10000136 3300013100 Bacteria 57912
84 Ga0157371_10087631 3300013102 Unclassified 2204
85 Ga0157370_10000875 3300013104 Bacteria 38190
86 Ga0157370_10019912 3300013104 Bacteria 6713
87 Ga0157370_10074992 3300013104 Bacteria 3190
88 Ga0157378_10438495 3300013297 Bacteria 1294
89 Ga0163162_10051041 3300013306 Bacteria 4149
90 Ga0157380_10201702 3300014326 Bacteria 1765
91 Ga0182008_10000171 3300014497 Bacteria 50744
92 Ga0157377_10018205 3300014745 Bacteria 3649
93 Ga0157379_10236204 3300014968 Bacteria 1657
94 Ga0163161_10057259 3300017792 Bacteria 2832
95 Ga0206353_10432510 3300020082 Bacteria 1983
96 Ga0213872_10077076 3300021361 Bacteria 1499
97 Ga0213876_10006363 3300021384 Bacteria 6434
98 Ga0207427_100138 3300025231 Bacteria 86499
99 Ga0209437_100010 3300025233 Bacteria 838447
100 Ga0209233_1000017 3300025261 Bacteria 898076
101 Ga0207653_10010504 3300025885 Bacteria 2887
102 Ga0207692_10001729 3300025898 Bacteria 8268
103 Ga0207710_10022874 3300025900 Bacteria 2683
104 Ga0207699_10009373 3300025906 Bacteria 4872
105 Ga0207699_10090978 3300025906 Bacteria 1915
106 Ga0207645_10130744 3300025907 Bacteria 1634
107 Ga0207705_10004269 3300025909 Bacteria 10824
108 Ga0207705_10038597 3300025909 Bacteria 3420
109 Ga0207705_10239360 3300025909 Bacteria 1382
110 Ga0207654_10050969 3300025911 Bacteria 2381
111 Ga0207671_10044787 3300025914 Bacteria 3272
112 Ga0207663_10010898 3300025916 Bacteria 4856
113 Ga0207660_10028736 3300025917 Bacteria 3806
114 Ga0207662_10009799 3300025918 Bacteria 5285
115 Ga0207657_10030359 3300025919 Bacteria 4906
116 Ga0207681_10252341 3300025923 Bacteria 1378
117 Ga0207700_10000849 3300025928 Bacteria 17621
118 Ga0207700_10013042 3300025928 Bacteria 5391
119 Ga0207700_10212510 3300025928 Bacteria 1636
120 Ga0207664_10019934 3300025929 Bacteria 4964
121 Ga0207664_10075121 3300025929 Bacteria 2732
122 Ga0207706_10086555 3300025933 Bacteria 2755
123 Ga0207686_10023404 3300025934 Bacteria 3568
124 Ga0207665_10016110 3300025939 Bacteria 4908
125 Ga0207665_10036566 3300025939 Bacteria 3266
126 Ga0207691_10088290 3300025940 Bacteria 2781
127 Ga0207691_10388335 3300025940 Bacteria 1191
128 Ga0207711_10263001 3300025941 Bacteria 1586
129 Ga0207689_10037317 3300025942 Bacteria 4030
130 Ga0207667_10028193 3300025949 Bacteria 6100
131 Ga0207712_10000994 3300025961 Bacteria 20219
132 Ga0207668_10016942 3300025972 Bacteria 4559
133 Ga0207640_10105434 3300025981 Bacteria 1986
134 Ga0207658_10000465 3300025986 Bacteria 37863
135 Ga0207658_10422900 3300025986 Bacteria 1175
136 Ga0207703_10240329 3300026035 Bacteria 1628
137 Ga0207678_10012497 3300026067 Bacteria 7456
138 Ga0207708_10055954 3300026075 Bacteria 3008
139 Ga0207702_10212451 3300026078 Bacteria 1799
140 Ga0207641_10040976 3300026088 Bacteria 3880
141 Ga0207676_10087931 3300026095 Bacteria 2542
142 Ga0207674_10002239 3300026116 Bacteria 24497
143 Ga0207675_100049097 3300026118 Bacteria 3939
144 Ga0207683_10003591 3300026121 Bacteria 13521
145 Ga0268266_10286124 3300028379 Bacteria 1534
146 Ga0268265_10003823 3300028380 Bacteria 10667
147 Ga0268264_10000158 3300028381 Bacteria 153433
148 Ga0268264_10135459 3300028381 Bacteria 2189
149 Ga0265340_10010287 3300031247 Bacteria 5006
150 Ga0265340_10025180 3300031247 Bacteria 3016
151 Ga0265316_10193692 3300031344 Bacteria 1509
152 Ga0307509_10036138 3300031507 Bacteria 5413
153 Ga0307516_10107903 3300031730 Bacteria 2592
154 Ga0316043_110883 3300031828 Eukaryota 1223
155 Ga0307412_10000067 3300031911 Bacteria 115549
156 Ga0307414_10031124 3300032004 Bacteria 3495
157 Ga0373948_0013404 3300034817 Bacteria 1480
158 Ga0373958_0003562 3300034819 Bacteria 2255
159 Ga0373926_0001497 3300035083 Bacteria 7140
160 Ga0373934_0006335 3300035086 Bacteria 4387
161 Ga0373944_0000176 3300035089 Bacteria 13159
162 Ga0373951_0019209 3300035091 Bacteria 1557
163 Ga0373923_0006274 3300035111 Bacteria 4097
164 Ga0373923_0032361 3300035111 Bacteria 2112
165 Ga0373945_0000329 3300035116 Bacteria 13481
166 Ga0373953_0023383 3300035117 Bacteria 2338
167 Ga0373956_0041423 3300035119 Bacteria 2044
168 Ga0373957_0003055 3300035120 Bacteria 4875
169 Ga0373960_0023807 3300035121 Bacteria 1651
170 Ga0373943_0022652 3300035170 Bacteria 2913
171 Ga0373946_0000964 3300035171 Bacteria 9865
172 Ga0373955_0013085 3300035172 Bacteria 4001
173 Ga0373962_0016613 3300035242 Bacteria 1900
174 Ga0373924_0003896 3300035410 Bacteria 5174
175 Ga0373927_0015440 3300035695 Bacteria 5045
176 Ga0373933_0125597 3300035724 Bacteria 1609
177 Ga0373947_0071103 3300035725 Bacteria 2133
178 Ga0436365_0505872 3300039437 Bacteria 9827
179 Ga0436361_0320757 3300039447 Bacteria 82248
180 Ga0436361_0598089 3300039447 Bacteria 1631
181 Ga0436361_0628366 3300039447 Bacteria 5420
182 Ga0436363_0171126 3300039450 Bacteria 1999
183 Ga0436362_0948098 3300039453 Bacteria 2238
184 Ga0439459_0038490 3300042438 Bacteria 1006
185 Ga0466965_0143846 3300044683 Bacteria 1243
186 Ga0466963_0141943 3300044694 Bacteria 1664
187 Ga0495592_0013911 3300046454 Bacteria 6113
188 Ga0495592_0154879 3300046454 Bacteria 1582
189 Ga0495629_0008289 3300046459 Bacteria 7638
190 Ga0495641_0006946 3300046461 Bacteria 7213
191 Ga0495651_0007677 3300046462 Bacteria 8246
192 Ga0495580_0030623 3300046472 Bacteria 3894
193 Ga0495639_0079647 3300046475 Bacteria 1524
194 Ga0495662_0012672 3300046476 Bacteria 4112
195 Ga0495606_0011553 3300046507 Bacteria 7188
196 Ga0495606_0127411 3300046507 Bacteria 1517
197 Ga0495608_0060598 3300046511 Bacteria 2489
198 Ga0495630_0011601 3300046517 Bacteria 6384
199 Ga0495648_0001975 3300046524 Bacteria 19477
200 Ga0495666_0013335 3300046526 Bacteria 4098
201 Ga0495665_0007733 3300046531 Bacteria 5815
202 Ga0495640_0012409 3300046533 Bacteria 6508
203 Ga0495587_0002315 3300046536 Bacteria 12736
204 Ga0495622_0034718 3300046557 Bacteria 2353
205 Ga0495668_0000073 3300046616 Bacteria 166105
206 Ga0495634_0076883 3300046642 Bacteria 2190
207 Ga0495635_0015560 3300046663 Bacteria 5316
208 Ga0495657_0041890 3300046675 Bacteria 3130
209 Ga0495599_0012826 3300046678 Bacteria 5172
210 Ga0495599_0219002 3300046678 Bacteria 1165
211 Ga0495623_0033440 3300046679 Bacteria 3299
212 Ga0495658_0021193 3300046683 Bacteria 3424
213 Ga0495613_0002132 3300046689 Bacteria 15002
214 Ga0495600_0002331 3300046809 Bacteria 10827
215 Ga0495581_0003416 3300047315 Bacteria 9116
216 Ga0495674_0090332 3300047319 Bacteria 2617
217 Ga0495680_0032939 3300047322 Bacteria 4200
218 Ga0495675_0048333 3300047444 Bacteria 2707
219 Ga0495684_0015722 3300047471 Bacteria 5823
220 Ga0495686_0000138 3300047472 Bacteria 146224
221 Ga0495686_0049470 3300047472 Unclassified 2645
222 Ga0495593_0002789 3300047673 Bacteria 10525
223 Ga0496100_0039635 3300048903 Bacteria 2992
224 Ga0496101_0147139 3300048904 Bacteria 1799
225 Ga0496102_0013534 3300048905 Bacteria 7069
226 Ga0496102_0041354 3300048905 Bacteria 4173
227 Ga0496103_0014529 3300048906 Bacteria 4674
228 Ga0496105_0054393 3300048908 Bacteria 3304
229 Ga0496106_0043586 3300048909 Bacteria 3366
230 Ga0496108_0028154 3300048911 Bacteria 4648
231 Ga0496110_0053597 3300048913 Bacteria 3546
232 Ga0496111_0053131 3300048914 Bacteria 2926
233 Ga0496113_0206485 3300048916 Bacteria 1562
234 Ga0496114_0028797 3300048917 Bacteria 4561
235 Ga0496115_0048719 3300048918 Bacteria 3389
236 Ga0496116_0000014 3300048919 Bacteria 569049
237 Ga0496120_0004228 3300048923 Bacteria 12249
238 Ga0496121_0005519 3300048924 Bacteria 16160
239 Ga0496121_0093748 3300048924 Bacteria 2337
240 Ga0496122_0008110 3300048925 Bacteria 11448
241 Ga0496126_0000688 3300048929 Bacteria 61933
242 Ga0501031_0000212 3300049568 Bacteria 33227
243 Ga0501032_0002370 3300049569 Bacteria 14726
244 Ga0501033_0002303 3300049570 Bacteria 16291
245 Ga0501036_0000125 3300049572 Bacteria 48737
246 Ga0501037_0001089 3300049573 Bacteria 20141
247 Ga0501038_0000169 3300049574 Bacteria 55445
248 Ga0501039_0000935 3300049575 Bacteria 21312
249 Ga0501040_0080105 3300049576 Bacteria 2262
250 Ga0501043_0000974 3300049579 Bacteria 25308
251 Ga0501043_0297128 3300049579 Bacteria 1235
252 Ga0501047_0000989 3300049581 Bacteria 28671
253 Ga0501048_0001271 3300049582 Bacteria 19112
254 Ga0501069_0009287 3300049585 Bacteria 5190
255 Ga0501070_0001235 3300049586 Bacteria 22901
256 Ga0501070_0031623 3300049586 Bacteria 4434
257 Ga0501071_0103032 3300049587 Bacteria 2105
258 Ga0501074_0000109 3300049590 Bacteria 40793
259 Ga0501080_0000184 3300049742 Bacteria 45504
260 Ga0501035_0019782 3300049822 Bacteria 6185
261 Ga0501044_0001206 3300049823 Bacteria 30687
262 nmdc:mga0n895_35797_c1 3300050512 Bacteria 4790
263 nmdc:mga0rr50_15484_c1 3300050513 Bacteria 5036
264 nmdc:mga0rr50_182533_c1 3300050513 Bacteria 1716
265 nmdc:mga08x19_55324_c1 3300050514 Bacteria 2557
266 Ga0495601_0088636 3300053077 Bacteria 1989
267 Ga0495595_0059172 3300053084 Bacteria 1791
268 Ga0495619_0015484 3300053085 Bacteria 4824
269 Ga0495619_0044253 3300053085 Bacteria 2922
270 Ga0500578_0011521 3300053086 Bacteria 5714
271 Ga0500651_0000218 3300053093 Bacteria 35905
272 Ga0500572_000572 3300053111 Bacteria 12542
273 Ga0500607_001536 3300053121 Eukaryota 20542
274 Ga0500559_0088747 3300053136 Bacteria 1413
275 Ga0500636_0018751 3300053177 Bacteria 4091
276 Ga0500596_000913 3300053735 Bacteria 5904
277 Ga0501084_0060952 3300054114 Bacteria 3158
278 Ga0501082_0007244 3300060353 Bacteria 9567
279 Ga0501082_0386080 3300060353 Unclassified 1222

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046454 Ga0495592_0154879 Ga0495592_0154879_736_1554 251
2 3300053077 Ga0495601_0088636 Ga0495601_0088636_1089_1907 251
3 3300003659 JGI25404J52841_10000659 JGI25404J52841_100006594 283
4 3300005327 Ga0070658_10284729 Ga0070658_102847292 283
5 3300005334 Ga0068869_100139229 Ga0068869_1001392292 283
6 3300005336 Ga0070680_100034941 Ga0070680_1000349413 283
7 3300005341 Ga0070691_10084470 Ga0070691_100844702 283
8 3300005344 Ga0070661_100088523 Ga0070661_1000885232 283
9 3300005353 Ga0070669_100147597 Ga0070669_1001475972 283
10 3300005355 Ga0070671_100124432 Ga0070671_1001244321 283
11 3300005366 Ga0070659_100026372 Ga0070659_1000263723 283
12 3300005440 Ga0070705_100089076 Ga0070705_1000890762 283
13 3300005466 Ga0070685_10079376 Ga0070685_100793762 283
14 3300005535 Ga0070684_100020641 Ga0070684_1000206414 283
15 3300005539 Ga0068853_100307647 Ga0068853_1003076472 283
16 3300005543 Ga0070672_100049228 Ga0070672_1000492284 283
17 3300005548 Ga0070665_100062325 Ga0070665_1000623253 283
18 3300005563 Ga0068855_100088478 Ga0068855_1000884784 283
19 3300005577 Ga0068857_100025516 Ga0068857_1000255164 283
20 3300005615 Ga0070702_100021644 Ga0070702_1000216443 283
21 3300005840 Ga0068870_10038922 Ga0068870_100389222 283
22 3300005841 Ga0068863_100014919 Ga0068863_1000149192 283
23 3300005843 Ga0068860_100212357 Ga0068860_1002123572 283
24 3300005983 Ga0081540_1000769 Ga0081540_100076912 283
25 3300006163 Ga0070715_10092822 Ga0070715_100928222 283
26 3300006237 Ga0097621_100067752 Ga0097621_1000677522 283
27 3300006358 Ga0068871_100152940 Ga0068871_1001529401 283
28 3300009174 Ga0105241_10036591 Ga0105241_100365912 283
29 3300009176 Ga0105242_10098412 Ga0105242_100984122 283
30 3300009177 Ga0105248_10021087 Ga0105248_100210876 283
31 3300009553 Ga0105249_10024803 Ga0105249_100248032 283
32 3300011119 Ga0105246_10023873 Ga0105246_100238733 283
33 3300014745 Ga0157377_10018205 Ga0157377_100182052 283
34 3300017792 Ga0163161_10057259 Ga0163161_100572592 283
35 3300025885 Ga0207653_10010504 Ga0207653_100105042 283
36 3300025900 Ga0207710_10022874 Ga0207710_100228742 283
37 3300025906 Ga0207699_10090978 Ga0207699_100909782 283
38 3300025909 Ga0207705_10239360 Ga0207705_102393602 283
39 3300025911 Ga0207654_10050969 Ga0207654_100509692 283
40 3300025917 Ga0207660_10028736 Ga0207660_100287363 283
41 3300025918 Ga0207662_10009799 Ga0207662_100097994 283
42 3300025928 Ga0207700_10000849 Ga0207700_1000084912 283
43 3300025929 Ga0207664_10019934 Ga0207664_100199343 283
44 3300025933 Ga0207706_10086555 Ga0207706_100865553 283
45 3300025934 Ga0207686_10023404 Ga0207686_100234043 283
46 3300025939 Ga0207665_10016110 Ga0207665_100161105 283
47 3300025940 Ga0207691_10088290 Ga0207691_100882903 283
48 3300025941 Ga0207711_10263001 Ga0207711_102630012 283
49 3300025942 Ga0207689_10037317 Ga0207689_100373173 283
50 3300025981 Ga0207640_10105434 Ga0207640_101054342 283
51 3300025986 Ga0207658_10422900 Ga0207658_104229002 283
52 3300026067 Ga0207678_10012497 Ga0207678_100124976 283
53 3300026078 Ga0207702_10212451 Ga0207702_102124512 283
54 3300026088 Ga0207641_10040976 Ga0207641_100409765 283
55 3300026095 Ga0207676_10087931 Ga0207676_100879312 283
56 3300026116 Ga0207674_10002239 Ga0207674_100022393 283
57 3300026118 Ga0207675_100049097 Ga0207675_1000490973 283
58 3300026121 Ga0207683_10003591 Ga0207683_1000359111 283
59 3300028381 Ga0268264_10135459 Ga0268264_101354593 283
60 3300034817 Ga0373948_0013404 Ga0373948_0013404_313_1305 283
61 3300035091 Ga0373951_0019209 Ga0373951_0019209_510_1502 283
62 3300035111 Ga0373923_0032361 Ga0373923_0032361_1104_2093 283
63 3300035121 Ga0373960_0023807 Ga0373960_0023807_589_1581 283
64 3300035242 Ga0373962_0016613 Ga0373962_0016613_738_1730 283
65 3300048903 Ga0496100_0039635 Ga0496100_0039635_1483_2475 283
66 3300048904 Ga0496101_0147139 Ga0496101_0147139_518_1510 283
67 3300048906 Ga0496103_0014529 Ga0496103_0014529_259_1251 283
68 3300048908 Ga0496105_0054393 Ga0496105_0054393_11_1003 283
69 3300048911 Ga0496108_0028154 Ga0496108_0028154_2244_3236 283
70 3300048913 Ga0496110_0053597 Ga0496110_0053597_1786_2778 283
71 3300048914 Ga0496111_0053131 Ga0496111_0053131_1656_2648 283
72 3300048916 Ga0496113_0206485 Ga0496113_0206485_53_1045 283
73 3300048917 Ga0496114_0028797 Ga0496114_0028797_226_1218 283
74 3300048918 Ga0496115_0048719 Ga0496115_0048719_2003_2995 283
75 3300048924 Ga0496121_0005519 Ga0496121_0005519_3238_4191 283
76 3300050513 nmdc:mga0rr50_182533_c1 nmdc:mga0rr50_182533_c1_452_1444 283
77 3300005340 Ga0070689_100337547 Ga0070689_1003375471 284
78 3300005618 Ga0068864_100063128 Ga0068864_1000631284 284
79 3300025919 Ga0207657_10030359 Ga0207657_100303593 284
80 3300048909 Ga0496106_0043586 Ga0496106_0043586_1022_2014 284
81 3300014326 Ga0157380_10201702 Ga0157380_102017022 286
82 3300020082 Ga0206353_10432510 Ga0206353_104325101 286
83 3300025907 Ga0207645_10130744 Ga0207645_101307441 286
84 3300026075 Ga0207708_10055954 Ga0207708_100559543 286
85 3300005436 Ga0070713_100138634 Ga0070713_1001386342 290
86 3300005437 Ga0070710_10060199 Ga0070710_100601992 290
87 3300014497 Ga0182008_10000171 Ga0182008_1000017141 290
88 3300025928 Ga0207700_10212510 Ga0207700_102125102 290
89 3300034819 Ga0373958_0003562 Ga0373958_0003562_331_1323 291
90 3300035083 Ga0373926_0001497 Ga0373926_0001497_3277_4269 292
91 3300035086 Ga0373934_0006335 Ga0373934_0006335_2502_3494 292
92 3300035089 Ga0373944_0000176 Ga0373944_0000176_10575_11567 292
93 3300035111 Ga0373923_0006274 Ga0373923_0006274_95_1087 292
94 3300035116 Ga0373945_0000329 Ga0373945_0000329_1683_2675 292
95 3300035117 Ga0373953_0023383 Ga0373953_0023383_267_1259 292
96 3300035119 Ga0373956_0041423 Ga0373956_0041423_634_1626 292
97 3300035120 Ga0373957_0003055 Ga0373957_0003055_839_1831 292
98 3300035170 Ga0373943_0022652 Ga0373943_0022652_1560_2552 292
99 3300035171 Ga0373946_0000964 Ga0373946_0000964_6530_7522 292
100 3300035172 Ga0373955_0013085 Ga0373955_0013085_1808_2800 292
101 3300035410 Ga0373924_0003896 Ga0373924_0003896_3667_4659 292
102 3300035695 Ga0373927_0015440 Ga0373927_0015440_3635_4627 292
103 3300035724 Ga0373933_0125597 Ga0373933_0125597_36_1028 292
104 3300035725 Ga0373947_0071103 Ga0373947_0071103_901_1893 292
105 3300046454 Ga0495592_0013911 Ga0495592_0013911_4389_5381 292
106 3300046459 Ga0495629_0008289 Ga0495629_0008289_1775_2767 292
107 3300046461 Ga0495641_0006946 Ga0495641_0006946_5108_6100 292
108 3300046462 Ga0495651_0007677 Ga0495651_0007677_707_1699 292
109 3300046472 Ga0495580_0030623 Ga0495580_0030623_559_1551 292
110 3300046476 Ga0495662_0012672 Ga0495662_0012672_986_1978 292
111 3300046511 Ga0495608_0060598 Ga0495608_0060598_512_1504 292
112 3300046517 Ga0495630_0011601 Ga0495630_0011601_4872_5864 292
113 3300046526 Ga0495666_0013335 Ga0495666_0013335_247_1239 292
114 3300046531 Ga0495665_0007733 Ga0495665_0007733_2041_3033 292
115 3300046533 Ga0495640_0012409 Ga0495640_0012409_5353_6345 292
116 3300046536 Ga0495587_0002315 Ga0495587_0002315_6549_7541 292
117 3300046557 Ga0495622_0034718 Ga0495622_0034718_85_1122 292
118 3300046642 Ga0495634_0076883 Ga0495634_0076883_640_1632 292
119 3300046663 Ga0495635_0015560 Ga0495635_0015560_830_1822 292
120 3300046675 Ga0495657_0041890 Ga0495657_0041890_1114_2106 292
121 3300046678 Ga0495599_0012826 Ga0495599_0012826_1837_2829 292
122 3300046679 Ga0495623_0033440 Ga0495623_0033440_674_1666 292
123 3300046683 Ga0495658_0021193 Ga0495658_0021193_1747_2739 292
124 3300046689 Ga0495613_0002132 Ga0495613_0002132_10916_11908 292
125 3300046809 Ga0495600_0002331 Ga0495600_0002331_5207_6199 292
126 3300047315 Ga0495581_0003416 Ga0495581_0003416_148_1140 292
127 3300047319 Ga0495674_0090332 Ga0495674_0090332_512_1504 292
128 3300047322 Ga0495680_0032939 Ga0495680_0032939_1649_2641 292
129 3300047444 Ga0495675_0048333 Ga0495675_0048333_640_1632 292
130 3300047471 Ga0495684_0015722 Ga0495684_0015722_393_1385 292
131 3300047673 Ga0495593_0002789 Ga0495593_0002789_9072_10064 292
132 3300053085 Ga0495619_0015484 Ga0495619_0015484_3440_4432 292
133 3300028379 Ga0268266_10286124 Ga0268266_102861242 293
134 3300046475 Ga0495639_0079647 Ga0495639_0079647_464_1453 293
135 3300044694 Ga0466963_0141943 Ga0466963_0141943_541_1449 295
136 iso_pu_bacteria 2791354901 2791911978 303
137 iso_pu_bacteria 2935883170 2935883181 303
138 iso_pu_bacteria 2675903058 2676473332 304
139 iso_pu_bacteria 2827628540 2827628567 304
140 3300053084 Ga0495595_0059172 Ga0495595_0059172_716_1696 305
141 3300053085 Ga0495619_0044253 Ga0495619_0044253_1741_2721 305
142 iso_pu_bacteria 2883577096 2883580763 306
143 3300005327 Ga0070658_10000677 Ga0070658_100006779 307
144 3300005347 Ga0070668_100011266 Ga0070668_1000112665 307
145 3300005367 Ga0070667_100009466 Ga0070667_1000094665 307
146 3300005548 Ga0070665_100130639 Ga0070665_1001306392 307
147 3300005844 Ga0068862_100000366 Ga0068862_10000036618 307
148 3300009094 Ga0111539_10342534 Ga0111539_103425342 307
149 3300009553 Ga0105249_10000916 Ga0105249_1000091618 307
150 3300013104 Ga0157370_10000875 Ga0157370_1000087531 307
151 3300025909 Ga0207705_10004269 Ga0207705_100042692 307
152 3300025961 Ga0207712_10000994 Ga0207712_1000099416 307
153 3300025972 Ga0207668_10016942 Ga0207668_100169423 307
154 3300025986 Ga0207658_10000465 Ga0207658_1000046542 307
155 3300028380 Ga0268265_10003823 Ga0268265_100038234 307
156 3300039447 Ga0436361_0628366 Ga0436361_0628366_1252_2196 307
157 3300048929 Ga0496126_0000688 Ga0496126_0000688_22395_23390 307
158 iso_pu_bacteria 2738541283 2738754120 307
159 iso_pu_bacteria 2738541284 2738761025 307
160 iso_pu_bacteria 2738543023 2739300177 307
161 3300005841 Ga0068863_100080496 Ga0068863_1000804962 308
162 3300005841 Ga0068863_100156550 Ga0068863_1001565503 308
163 3300005842 Ga0068858_100129199 Ga0068858_1001291993 308
164 3300009147 Ga0114129_10579458 Ga0114129_105794582 308
165 3300014968 Ga0157379_10236204 Ga0157379_102362043 308
166 3300021361 Ga0213872_10077076 Ga0213872_100770762 308
167 3300026035 Ga0207703_10240329 Ga0207703_102403292 308
168 3300031247 Ga0265340_10010287 Ga0265340_100102874 308
169 3300031247 Ga0265340_10025180 Ga0265340_100251802 308
170 3300031344 Ga0265316_10193692 Ga0265316_101936922 308
171 3300039447 Ga0436361_0320757 Ga0436361_0320757_37849_38805 308
172 3300039447 Ga0436361_0598089 Ga0436361_0598089_492_1442 308
173 3300042438 Ga0439459_0038490 Ga0439459_0038490_35_988 308
174 3300044683 Ga0466965_0143846 Ga0466965_0143846_57_1022 308
175 3300048905 Ga0496102_0013534 Ga0496102_0013534_4903_5856 308
176 3300048905 Ga0496102_0041354 Ga0496102_0041354_1262_2215 308
177 3300048919 Ga0496116_0000014 Ga0496116_0000014_527105_528058 308
178 3300048923 Ga0496120_0004228 Ga0496120_0004228_8571_9524 308
179 3300049579 Ga0501043_0297128 Ga0501043_0297128_230_1183 308
180 3300049586 Ga0501070_0031623 Ga0501070_0031623_3399_4352 308
181 3300005434 Ga0070709_10012049 Ga0070709_100120492 309
182 3300005435 Ga0070714_100014154 Ga0070714_1000141542 309
183 3300005436 Ga0070713_100013382 Ga0070713_1000133823 309
184 3300005437 Ga0070710_10000417 Ga0070710_100004175 309
185 3300005439 Ga0070711_100003647 Ga0070711_1000036475 309
186 3300005841 Ga0068863_100063912 Ga0068863_1000639123 309
187 3300005843 Ga0068860_100003306 Ga0068860_10000330614 309
188 3300006173 Ga0070716_100008527 Ga0070716_1000085274 309
189 3300009094 Ga0111539_10097737 Ga0111539_100977372 309
190 3300013297 Ga0157378_10438495 Ga0157378_104384952 309
191 3300021384 Ga0213876_10006363 Ga0213876_100063634 309
192 3300025898 Ga0207692_10001729 Ga0207692_100017294 309
193 3300025906 Ga0207699_10009373 Ga0207699_100093733 309
194 3300025914 Ga0207671_10044787 Ga0207671_100447873 309
195 3300025916 Ga0207663_10010898 Ga0207663_100108983 309
196 3300025923 Ga0207681_10252341 Ga0207681_102523411 309
197 3300025928 Ga0207700_10013042 Ga0207700_100130423 309
198 3300025929 Ga0207664_10075121 Ga0207664_100751212 309
199 3300025939 Ga0207665_10036566 Ga0207665_100365663 309
200 3300028381 Ga0268264_10000158 Ga0268264_10000158114 309
201 3300031507 Ga0307509_10036138 Ga0307509_100361385 309
202 3300031730 Ga0307516_10107903 Ga0307516_101079033 309
203 3300039437 Ga0436365_0505872 Ga0436365_0505872_1637_2596 309
204 3300039450 Ga0436363_0171126 Ga0436363_0171126_166_1128 309
205 3300039453 Ga0436362_0948098 Ga0436362_0948098_144_1103 309
206 3300046507 Ga0495606_0127411 Ga0495606_0127411_285_1247 309
207 3300046524 Ga0495648_0001975 Ga0495648_0001975_3170_4147 309
208 3300046616 Ga0495668_0000073 Ga0495668_0000073_99817_100794 309
209 3300046678 Ga0495599_0219002 Ga0495599_0219002_182_1141 309
210 3300048924 Ga0496121_0093748 Ga0496121_0093748_465_1424 309
211 3300053121 Ga0500607_001536 Ga0500607_001536_8385_9509 309
212 3300053136 Ga0500559_0088747 Ga0500559_0088747_359_1318 309
213 3300053177 Ga0500636_0018751 Ga0500636_0018751_1629_2588 309
214 3300053735 Ga0500596_000913 Ga0500596_000913_387_1346 309
215 3300060353 Ga0501082_0386080 Ga0501082_0386080_188_1144 309
216 3300002737 JGI25162J39368_1000688 JGI25162J39368_10006884 310
217 3300002772 JGI25164J39214_1001281 JGI25164J39214_10012817 310
218 3300003214 JGI25165J46597_1000846 JGI25165J46597_100084620 310
219 3300003320 rootH2_10025281 rootH2_100252811 310
220 3300003323 rootH1_10001276 rootH1_1000127610 310
221 3300005293 Ga0065715_10032744 Ga0065715_100327442 310
222 3300005327 Ga0070658_10029994 Ga0070658_100299943 310
223 3300005440 Ga0070705_100002509 Ga0070705_1000025097 310
224 3300005445 Ga0070708_100003129 Ga0070708_10000312911 310
225 3300005467 Ga0070706_100068265 Ga0070706_1000682653 310
226 3300005467 Ga0070706_100336954 Ga0070706_1003369542 310
227 3300005468 Ga0070707_100017995 Ga0070707_1000179953 310
228 3300005518 Ga0070699_100006901 Ga0070699_10000690111 310
229 3300005536 Ga0070697_100011518 Ga0070697_1000115186 310
230 3300005563 Ga0068855_100018734 Ga0068855_1000187344 310
231 3300005843 Ga0068860_100162308 Ga0068860_1001623082 310
232 3300006871 Ga0075434_100044764 Ga0075434_1000447645 310
233 3300006914 Ga0075436_100025181 Ga0075436_1000251816 310
234 3300006914 Ga0075436_100128822 Ga0075436_1001288222 310
235 3300007076 Ga0075435_100006328 Ga0075435_1000063287 310
236 3300009098 Ga0105245_10012688 Ga0105245_100126887 310
237 3300013102 Ga0157371_10087631 Ga0157371_100876313 310
238 3300025231 Ga0207427_100138 Ga0207427_10013839 310
239 3300025233 Ga0209437_100010 Ga0209437_10001062 310
240 3300025261 Ga0209233_1000017 Ga0209233_100001775 310
241 3300025909 Ga0207705_10038597 Ga0207705_100385972 310
242 3300025949 Ga0207667_10028193 Ga0207667_100281937 310
243 3300049568 Ga0501031_0000212 Ga0501031_0000212_15495_16520 310
244 3300049569 Ga0501032_0002370 Ga0501032_0002370_4102_5127 310
245 3300049570 Ga0501033_0002303 Ga0501033_0002303_10964_11989 310
246 3300049572 Ga0501036_0000125 Ga0501036_0000125_30574_31599 310
247 3300049573 Ga0501037_0001089 Ga0501037_0001089_3752_4777 310
248 3300049574 Ga0501038_0000169 Ga0501038_0000169_37841_38866 310
249 3300049575 Ga0501039_0000935 Ga0501039_0000935_17010_18035 310
250 3300049576 Ga0501040_0080105 Ga0501040_0080105_600_1625 310
251 3300049579 Ga0501043_0000974 Ga0501043_0000974_15411_16436 310
252 3300049581 Ga0501047_0000989 Ga0501047_0000989_16187_17212 310
253 3300049582 Ga0501048_0001271 Ga0501048_0001271_5184_6209 310
254 3300049585 Ga0501069_0009287 Ga0501069_0009287_77_1102 310
255 3300049586 Ga0501070_0001235 Ga0501070_0001235_8261_9286 310
256 3300049587 Ga0501071_0103032 Ga0501071_0103032_1030_2055 310
257 3300049590 Ga0501074_0000109 Ga0501074_0000109_26761_27786 310
258 3300049742 Ga0501080_0000184 Ga0501080_0000184_28422_29447 310
259 3300049822 Ga0501035_0019782 Ga0501035_0019782_72_1097 310
260 3300049823 Ga0501044_0001206 Ga0501044_0001206_16058_17083 310
261 3300050512 nmdc:mga0n895_35797_c1 nmdc:mga0n895_35797_c1_2279_3217 310
262 3300050513 nmdc:mga0rr50_15484_c1 nmdc:mga0rr50_15484_c1_2414_3352 310
263 3300050514 nmdc:mga08x19_55324_c1 nmdc:mga08x19_55324_c1_159_1097 310
264 3300054114 Ga0501084_0060952 Ga0501084_0060952_973_1998 310
265 3300060353 Ga0501082_0007244 Ga0501082_0007244_5982_6944 310
266 2162886007 SwRhRL2b_contig_116274 SwRhRL2b_0694.00004650 311
267 3300005288 Ga0065714_10064455 Ga0065714_1006445549 311
268 3300005288 Ga0065714_10071478 Ga0065714_100714782 311
269 3300005289 Ga0065704_10000193 Ga0065704_1000019391 311
270 3300005353 Ga0070669_100378539 Ga0070669_1003785391 311
271 3300010159 Ga0099796_10004727 Ga0099796_100047273 311
272 3300013100 Ga0157373_10000136 Ga0157373_1000013642 311
273 3300013104 Ga0157370_10019912 Ga0157370_100199124 311
274 3300013104 Ga0157370_10074992 Ga0157370_100749922 311
275 3300013306 Ga0163162_10051041 Ga0163162_100510412 311
276 3300025940 Ga0207691_10388335 Ga0207691_103883351 311
277 3300031828 Ga0316043_110883 Ga0316043_1108831 311
278 3300031911 Ga0307412_10000067 Ga0307412_1000006797 311
279 3300032004 Ga0307414_10031124 Ga0307414_100311242 311
280 3300046507 Ga0495606_0011553 Ga0495606_0011553_5733_6674 311
281 3300047472 Ga0495686_0000138 Ga0495686_0000138_123293_124240 311
282 3300047472 Ga0495686_0049470 Ga0495686_0049470_349_1341 311
283 3300048925 Ga0496122_0008110 Ga0496122_0008110_3613_4668 311
284 3300053086 Ga0500578_0011521 Ga0500578_0011521_2090_3031 311
285 3300053093 Ga0500651_0000218 Ga0500651_0000218_11971_12906 311
286 3300053111 Ga0500572_000572 Ga0500572_000572_9308_10279 311

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02826

2-Hacid_dh_C

D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain

142

342

0.88

PF00389

2-Hacid_dh

D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain

26

374

0.65

Structural Annotation

Top 5 Hits

ID Description Score Start End
7va1-assembly1.cif.gz_B crystal structure of human 3-phosphoglycerate dehydrogenase in complex with gdd-04-35 0.9544 109 293
7cvp-assembly1.cif.gz_B the crystal structure of human phgdh from biortus. 0.9312 109 304
7va1-assembly1.cif.gz_B crystal structure of human 3-phosphoglycerate dehydrogenase in complex with gdd-04-35 0.9253 109 293
3gg9-assembly2.cif.gz_C crystal structure of putative d-3-phosphoglycerate dehydrogenase oxidoreductase from ralstonia solanacearum 0.9229 5 310
6rj6-assembly1.cif.gz_B crystal structure of phgdh in complex with bi-4924 0.9152 109 309
ID Description Score Start End Superfamily
af_Q4CQU6_365_588_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9632 147 175 3.50.50.60
af_F1QW85_122_309_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9504 110 286 3.40.50.720
af_Q2FZW9_11_72_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9504 43 103 3.40.50.720
4s1vD02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.95 108 291 3.40.50.720
af_O88712_64_123_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9466 53 102 3.90.180.10
ID Description Score Start End GO Terms
AF-A0A1C3NYR9-F1-model_v4 Phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.9796 84 309 GO:0004617
GO:0051287
AF-A0A7X1U1R9-F1-model_v4 D-2-hydroxyacid dehydrogenase family protein 0.9762 113 310 GO:0016614
GO:0051287
AF-A0A6I1L6U1-F1-model_v4 Hydroxypyruvate reductase 0.9748 120 309 GO:0016616
GO:0051287
AF-A0A7Z0NH82-F1-model_v4 D-2-hydroxyacid dehydrogenase family protein 0.9737 6 310 GO:0016616
GO:0051287
AF-A0A519V3S1-F1-model_v4 D-2-hydroxyacid dehydrogenase family protein 0.9732 35 310 GO:0016616
GO:0051287

Feature Viewer

pLDDT pTM Quality
94.77 0.88 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map