F379939

General Info

Members Datasets Scaffolds Average Seq Length
274 185 249 783

Family's Representative Sequence

Representative Sequence 3300046460|Ga0495638_0016155|Ga0495638_0016155_278_2755
Length 825
Sequence VANPCDRKTAYVFADRALEDSNGAGESASPDGGCVDLKPRERWIAIAGVAVLSAIAVAGFTIAIYAAWLFHDMPDAGELQDYRPPTATRVYAWDGTLIGEYSKERRIFVPYDQIPSQLAQAFLAAEDHNFFKHGGVDVGGFSRAMLNNVGNAARGRRLEGGSTITQQVAKNVLLTSDATIGRKFKEAILAHRLEQSLSKQQILELYLNEIWLGYRSYGVGAAAYNYFGKSLPELTLAESAYLAALPKGPDNYHPIRNKAKAKARRDWILGQMAEQGWISQDDARKAMAEDLIVQAAPSRAKYRDADYFVEEVRQRGVATLGPRLNEGGYYMRTTLDPKLQTAARVALMEGLEKYDRRHGWRGAWGHVEALDADWEKQALKKAPPSERRGWRAAIVTSASGGVRLAKGEGEGAIAGEDMAWANATKGLKVGDLVFVEKSESSANYRLRQTPIVNGALVAMEPYTGRVVALVGGYSYSLSNFNRATQAMRQPGSAFKPFVYATALENGYTPASVVVDSAITLKGANGEDWSPENYHKKFYGALPLRKGLEQSINAMTVRLAQSVGMKKIVETAKKTGITHEMAPVLAMALGAGETTPFKLTTAYTPFVNGGRRVEPHLIELVQDREGKVIFRADKRDCVRCNAGFNGDESPRIPALGEQVMDPITAYQITSMLQGVVQRGTAAQASSLGYPLAGKTGTTNEYRSAWFMGYSPNLVVGVFIGFDDNRSLGEGETGATGPVPIFMDFMREALKNQPKTEFKVPKNAKFAMVRGIREAFRPGTEPKVVVPTESTGPQPYGDAWPGGQIGPAPTQGPAKPPTQAPDISGLY

Samples

Sample ID Description Type Environment
1 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
2 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
3 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
4 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
5 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
6 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
7 2643221583 Caulobacter sp. Root655 Isolate Unclassified
8 2643221584 Caulobacter sp. Root656 Isolate Unclassified
9 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
10 2643221640 Caulobacter sp. Root342 Isolate Unclassified
11 2643221642 Caulobacter sp. Root343 Isolate Unclassified
12 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
13 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
14 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
15 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
16 2818991435 Caulobacter henricii 536 Isolate Unclassified
17 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
18 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
19 2849560528 Caulobacter zeae 410 Isolate Unclassified
20 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
21 2851153111 Caulobacter radicis 736 Isolate Unclassified
22 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
23 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
24 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
25 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
26 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
27 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
28 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
29 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
30 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
31 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
32 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
33 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
34 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
35 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
36 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
37 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
38 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
39 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
40 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
41 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
42 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
43 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
44 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
45 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
46 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
47 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
48 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
49 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
50 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
51 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
52 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
53 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
54 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
55 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
56 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
57 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
58 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
59 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
60 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
61 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
62 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
63 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
64 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
67 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
68 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
69 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
70 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
71 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
72 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
73 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
76 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
78 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
101 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
102 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
103 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
104 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
105 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
106 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
107 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
108 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
109 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
110 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
111 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
114 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
115 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
116 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
117 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
118 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
119 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
120 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
121 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
122 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
123 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
124 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
125 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
126 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
127 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
128 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
129 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
130 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
131 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
132 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
133 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
134 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
135 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
136 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
137 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
138 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
139 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
140 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
141 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
142 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
143 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
144 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
145 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
146 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
147 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
148 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
149 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
150 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
151 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
152 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
153 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
154 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
159 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
160 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
161 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
162 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
163 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
164 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
165 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
166 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
167 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
168 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
169 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
170 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
171 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
172 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
173 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
174 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
175 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
176 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
177 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
178 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
179 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
180 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
181 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
182 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
183 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
184 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
185 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.51
Metatranscriptomes 0.36
Isolates 9.12

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 26.64
Nodule 0
Rhizoplane 0.73
Rhizosphere 61.68
Stem 0
Stem Tuber 0
Unclassified 10.95

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006562J51391_1034973 3300003578 Bacteria 3380
2 Ga0055526_1011343 3300003771 Bacteria 4024
3 Ga0055537_1001496 3300003773 Bacteria 8997
4 Ga0055524_1005233 3300003775 Bacteria 5833
5 Ga0055536_1008234 3300003781 Bacteria 4519
6 Ga0055536_1008504 3300003781 Bacteria 4401
7 Ga0055528_1001015 3300003790 Bacteria 18639
8 Ga0055530_10000140 3300003791 Bacteria 64560
9 Ga0055531_10007368 3300003794 Bacteria 6025
10 Ga0055531_10009440 3300003794 Bacteria 4983
11 Ga0055531_10013636 3300003794 Bacteria 3730
12 Ga0055543_1004442 3300004625 Bacteria 3829
13 Ga0065165_1000412 3300005262 Bacteria 68242
14 Ga0065165_1001393 3300005262 Bacteria 26448
15 Ga0070670_100000181 3300005331 Bacteria 57536
16 Ga0070670_100017860 3300005331 Bacteria 6088
17 Ga0070680_100012327 3300005336 Bacteria 6639
18 Ga0070680_100042671 3300005336 Bacteria 3681
19 Ga0070660_100024893 3300005339 Bacteria 4445
20 Ga0070668_100000127 3300005347 Bacteria 47273
21 Ga0070668_100000652 3300005347 Bacteria 23465
22 Ga0070668_100003044 3300005347 Bacteria 12405
23 Ga0070668_100062925 3300005347 Bacteria 2876
24 Ga0070669_100014108 3300005353 Bacteria 5684
25 Ga0070671_100049907 3300005355 Bacteria 3481
26 Ga0070659_100001070 3300005366 Bacteria 20035
27 Ga0070667_100000318 3300005367 Bacteria 53641
28 Ga0070681_10005988 3300005458 Bacteria 11783
29 Ga0070681_10011884 3300005458 Bacteria 8634
30 Ga0070679_100006644 3300005530 Bacteria 10784
31 Ga0068853_100016359 3300005539 Bacteria 6103
32 Ga0070665_100000505 3300005548 Bacteria 55944
33 Ga0070665_100001024 3300005548 Bacteria 35060
34 Ga0070665_100057003 3300005548 Bacteria 3918
35 Ga0068855_100019278 3300005563 Bacteria 8199
36 Ga0070664_100065807 3300005564 Bacteria 3094
37 Ga0068859_100004814 3300005617 Bacteria 13744
38 Ga0068864_100000154 3300005618 Bacteria 63744
39 Ga0068864_100000168 3300005618 Bacteria 60403
40 Ga0068863_100000172 3300005841 Bacteria 68888
41 Ga0068863_100000333 3300005841 Bacteria 47923
42 Ga0068863_100006919 3300005841 Bacteria 11115
43 Ga0068858_100000922 3300005842 Bacteria 30502
44 Ga0068860_100000260 3300005843 Bacteria 77214
45 Ga0068860_100000452 3300005843 Bacteria 51890
46 Ga0068862_100000382 3300005844 Bacteria 47835
47 Ga0068862_100003851 3300005844 Bacteria 12779
48 Ga0068862_100006066 3300005844 Bacteria 10061
49 Ga0068862_100045735 3300005844 Bacteria 3735
50 Ga0075368_10001325 3300006042 Bacteria 7849
51 Ga0075364_10004765 3300006051 Bacteria 7840
52 Ga0075367_10005103 3300006178 Bacteria 6480
53 Ga0075369_10007179 3300006186 Bacteria 4235
54 Ga0075366_10039012 3300006195 Bacteria 2805
55 Ga0068865_100001450 3300006881 Bacteria 13803
56 Ga0097620_100004813 3300006931 Bacteria 13744
57 Ga0105240_10013799 3300009093 Bacteria 11067
58 Ga0105240_10039416 3300009093 Bacteria 6050
59 Ga0105240_10070984 3300009093 Bacteria 4307
60 Ga0105248_10005267 3300009177 Bacteria 14232
61 Ga0105248_10012795 3300009177 Bacteria 9256
62 Ga0105248_10096373 3300009177 Bacteria 3332
63 Ga0157369_10015433 3300013105 Bacteria 8609
64 Ga0163162_10048213 3300013306 Bacteria 4268
65 Ga0157372_10083131 3300013307 Bacteria 3626
66 Ga0163163_10010279 3300014325 Bacteria 8409
67 Ga0157379_10000787 3300014968 Bacteria 25755
68 Ga0157379_10005150 3300014968 Bacteria 11223
69 Ga0157379_10048675 3300014968 Bacteria 3784
70 Ga0213876_10000129 3300021384 Bacteria 82128
71 Ga0209565_1000588 3300025263 Bacteria 24552
72 Ga0209673_1001270 3300025273 Bacteria 25901
73 Ga0209676_1000679 3300025292 Bacteria 48245
74 Ga0209676_1000835 3300025292 Bacteria 39928
75 Ga0209564_1008913 3300025295 Bacteria 4867
76 Ga0209758_1000528 3300025297 Bacteria 61055
77 Ga0209758_1007407 3300025297 Bacteria 7486
78 Ga0209050_1000141 3300025298 Bacteria 173116
79 Ga0209050_1000807 3300025298 Bacteria 44122
80 Ga0209050_1001452 3300025298 Bacteria 25445
81 Ga0209256_1005498 3300025299 Bacteria 7250
82 Ga0209257_1000609 3300025304 Bacteria 58413
83 Ga0209257_1000807 3300025304 Bacteria 45532
84 Ga0209257_1001485 3300025304 Bacteria 27528
85 Ga0209257_1007321 3300025304 Bacteria 6703
86 Ga0207695_10001655 3300025913 Bacteria 35911
87 Ga0207695_10003608 3300025913 Bacteria 21646
88 Ga0207695_10027129 3300025913 Bacteria 6380
89 Ga0207657_10000753 3300025919 Bacteria 34370
90 Ga0207652_10005689 3300025921 Bacteria 10119
91 Ga0207650_10000201 3300025925 Bacteria 69058
92 Ga0207690_10000053 3300025932 Bacteria 105125
93 Ga0207690_10001699 3300025932 Bacteria 13551
94 Ga0207706_10050475 3300025933 Bacteria 3676
95 Ga0207704_10001115 3300025938 Bacteria 11956
96 Ga0207711_10001583 3300025941 Bacteria 21002
97 Ga0207711_10074543 3300025941 Bacteria 2951
98 Ga0207679_10016306 3300025945 Bacteria 4931
99 Ga0207667_10014072 3300025949 Bacteria 9133
100 Ga0207668_10000007 3300025972 Bacteria 190613
101 Ga0207668_10000036 3300025972 Bacteria 117190
102 Ga0207668_10002642 3300025972 Bacteria 10483
103 Ga0207658_10000052 3300025986 Bacteria 128748
104 Ga0207658_10020921 3300025986 Bacteria 4534
105 Ga0207703_10000289 3300026035 Bacteria 55525
106 Ga0207703_10004797 3300026035 Bacteria 11018
107 Ga0207703_10036695 3300026035 Bacteria 3902
108 Ga0207639_10024018 3300026041 Bacteria 4406
109 Ga0207641_10000160 3300026088 Bacteria 95407
110 Ga0207641_10005720 3300026088 Bacteria 10560
111 Ga0207641_10008074 3300026088 Bacteria 8720
112 Ga0207676_10000286 3300026095 Bacteria 43696
113 Ga0207676_10002350 3300026095 Bacteria 13520
114 Ga0207674_10086852 3300026116 Bacteria 3122
115 Ga0209983_1002741 3300027665 Bacteria 3824
116 Ga0268266_10000355 3300028379 Bacteria 70950
117 Ga0268266_10003684 3300028379 Bacteria 15125
118 Ga0268266_10005430 3300028379 Bacteria 11885
119 Ga0268265_10003889 3300028380 Bacteria 10541
120 Ga0268265_10008570 3300028380 Bacteria 6911
121 Ga0268265_10009281 3300028380 Bacteria 6649
122 Ga0268265_10045725 3300028380 Bacteria 3269
123 Ga0268264_10000169 3300028381 Bacteria 144978
124 Ga0268264_10001403 3300028381 Bacteria 22517
125 Ga0268264_10010538 3300028381 Bacteria 7644
126 Ga0265334_10020093 3300028573 Bacteria 2739
127 Ga0307515_10038227 3300028794 Bacteria 7685
128 Ga0265338_10012096 3300028800 Bacteria 9863
129 Ga0265327_10000190 3300031251 Bacteria 130086
130 Ga0265327_10002750 3300031251 Bacteria 17883
131 Ga0307513_10000261 3300031456 Bacteria 76045
132 Ga0307513_10006523 3300031456 Bacteria 15243
133 Ga0307409_100064877 3300031995 Bacteria 2871
134 Ga0307510_10034026 3300033180 Bacteria 5712
135 Ga0373927_0006368 3300035695 Bacteria 8043
136 Ga0373925_0000061 3300037068 Bacteria 117783
137 Ga0395899_0000070 3300037312 Bacteria 189668
138 Ga0395899_0005959 3300037312 Bacteria 9467
139 Ga0395900_0000009 3300037418 Bacteria 476249
140 Ga0395900_0012889 3300037418 Bacteria 8540
141 Ga0395898_0009333 3300037466 Bacteria 10309
142 Ga0395898_0016901 3300037466 Bacteria 7449
143 Ga0395905_0012712 3300037471 Bacteria 8097
144 Ga0395905_0015332 3300037471 Bacteria 7285
145 Ga0395901_0000014 3300038443 Bacteria 375100
146 Ga0436365_0218820 3300039437 Bacteria 38620
147 Ga0436365_0633929 3300039437 Bacteria 6002
148 Ga0436361_0038945 3300039447 Bacteria 3185
149 Ga0436361_0139780 3300039447 Bacteria 15843
150 Ga0495627_001176 3300046453 Bacteria 16659
151 Ga0495590_0000292 3300046457 Bacteria 26661
152 Ga0495638_0001201 3300046460 Bacteria 24743
153 Ga0495638_0002205 3300046460 Bacteria 16252
154 Ga0495638_0009022 3300046460 Bacteria 7032
155 Ga0495638_0016155 3300046460 Bacteria 5002
156 Ga0495638_0016955 3300046460 Bacteria 4870
157 Ga0495638_0041266 3300046460 Bacteria 2920
158 Ga0495650_0000007 3300046471 Bacteria 718072
159 Ga0495583_0000037 3300046506 Bacteria 244437
160 Ga0495583_0019977 3300046506 Bacteria 3483
161 Ga0495610_0000205 3300046512 Bacteria 65600
162 Ga0495610_0002896 3300046512 Bacteria 13888
163 Ga0495616_0000159 3300046513 Bacteria 58948
164 Ga0495620_0019321 3300046515 Bacteria 3353
165 Ga0495620_0021549 3300046515 Bacteria 3128
166 Ga0495631_0018170 3300046518 Bacteria 3314
167 Ga0495632_0004374 3300046519 Bacteria 9610
168 Ga0495637_0016349 3300046520 Bacteria 3469
169 Ga0495643_0008868 3300046522 Bacteria 6327
170 Ga0495648_0000154 3300046524 Bacteria 81679
171 Ga0495648_0033247 3300046524 Bacteria 3371
172 Ga0495642_0004663 3300046528 Bacteria 5311
173 Ga0495654_0000100 3300046530 Bacteria 98615
174 Ga0495597_0003291 3300046542 Bacteria 9560
175 Ga0495622_0018168 3300046557 Bacteria 3275
176 Ga0495633_0000871 3300046558 Bacteria 26182
177 Ga0495668_0000092 3300046616 Bacteria 142835
178 Ga0495668_0022223 3300046616 Bacteria 3627
179 Ga0495611_0006258 3300046648 Bacteria 5079
180 Ga0495625_0000080 3300046660 Bacteria 156895
181 Ga0495625_0001887 3300046660 Bacteria 23734
182 Ga0495625_0021762 3300046660 Bacteria 4928
183 Ga0495669_0000003 3300046684 Bacteria 267741
184 Ga0495613_0000461 3300046689 Bacteria 34821
185 Ga0495649_0000934 3300046694 Bacteria 23107
186 Ga0495660_0009962 3300046810 Bacteria 5531
187 Ga0495672_0001481 3300047320 Bacteria 23043
188 Ga0495672_0022137 3300047320 Bacteria 4137
189 Ga0495679_016309 3300047446 Bacteria 2690
190 Ga0495673_0000132 3300047469 Bacteria 138001
191 Ga0495673_0000363 3300047469 Bacteria 54803
192 Ga0495686_0002336 3300047472 Bacteria 18110
193 Ga0495686_0003935 3300047472 Bacteria 12498
194 Ga0496107_0000142 3300048910 Bacteria 35781
195 Ga0496108_0025807 3300048911 Bacteria 4845
196 Ga0496121_0000009 3300048924 Bacteria 836971
197 Ga0496122_0004328 3300048925 Bacteria 17774
198 Ga0496123_0004305 3300048926 Bacteria 15121
199 Ga0496124_0006726 3300048927 Bacteria 12437
200 Ga0496125_0053932 3300048928 Bacteria 3291
201 Ga0496126_0001918 3300048929 Bacteria 29829
202 Ga0495678_004445 3300049459 Bacteria 8104
203 Ga0501033_0004173 3300049570 Bacteria 11633
204 Ga0501034_0010740 3300049571 Bacteria 9509
205 Ga0501047_0011141 3300049581 Bacteria 8509
206 Ga0501047_0058575 3300049581 Bacteria 3721
207 Ga0501048_0024643 3300049582 Bacteria 4391
208 Ga0501238_000314 3300049671 Bacteria 6336
209 Ga0501044_0001038 3300049823 Bacteria 33410
210 nmdc:mga03n38_5177_c1 3300050490 Bacteria 4412
211 nmdc:mga00v17_871_c1 3300050491 Bacteria 16300
212 nmdc:mga0sz30_953_c1 3300050516 Bacteria 10365
213 Ga0500635_0000180 3300053080 Bacteria 32610
214 Ga0500578_0000092 3300053086 Bacteria 102206
215 Ga0500643_000532 3300053087 Bacteria 26733
216 Ga0500643_006158 3300053087 Bacteria 5057
217 Ga0500643_007611 3300053087 Bacteria 4340
218 Ga0500644_0000121 3300053088 Bacteria 48128
219 Ga0500641_0000538 3300053096 Bacteria 13675
220 Ga0500556_0000865 3300053104 Bacteria 17120
221 Ga0500556_0012792 3300053104 Bacteria 2518
222 Ga0500562_000743 3300053108 Bacteria 7918
223 Ga0500562_000841 3300053108 Bacteria 7428
224 Ga0500562_000938 3300053108 Bacteria 7097
225 Ga0500569_003560 3300053109 Bacteria 3196
226 Ga0500572_000202 3300053111 Bacteria 21072
227 Ga0500594_0000410 3300053118 Bacteria 9506
228 Ga0500595_007867 3300053119 Bacteria 4391
229 Ga0500608_001841 3300053122 Bacteria 7554
230 Ga0500608_018662 3300053122 Bacteria 3168
231 Ga0500618_000418 3300053125 Bacteria 28672
232 Ga0500658_0003130 3300053134 Bacteria 6320
233 Ga0500559_0000035 3300053136 Bacteria 110851
234 Ga0500559_0000921 3300053136 Bacteria 18659
235 Ga0500559_0009715 3300053136 Bacteria 4152
236 Ga0500577_0002158 3300053142 Bacteria 5021
237 Ga0500590_023006 3300053148 Bacteria 3237
238 Ga0500616_0018548 3300053153 Bacteria 3932
239 Ga0500622_0005042 3300053156 Bacteria 8041
240 Ga0500622_0006240 3300053156 Bacteria 6966
241 Ga0500622_0009863 3300053156 Bacteria 5270
242 Ga0500622_0021035 3300053156 Bacteria 3463
243 Ga0500625_009065 3300053729 Bacteria 4424
244 Ga0500645_000537 3300053730 Bacteria 25218
245 Ga0500645_000751 3300053730 Bacteria 19863
246 Ga0500645_001947 3300053730 Bacteria 9782
247 Ga0500645_002156 3300053730 Bacteria 9027
248 Ga0500609_000223 3300053731 Bacteria 8161
249 Ga0500596_001419 3300053735 Bacteria 4840

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300053104 Ga0500556_0012792 Ga0500556_0012792_445_2484 630
2 3300046542 Ga0495597_0003291 Ga0495597_0003291_7358_9529 674
3 3300026116 Ga0207674_10086852 Ga0207674_100868522 693
4 3300013306 Ga0163162_10048213 Ga0163162_100482132 702
5 3300037312 Ga0395899_0005959 Ga0395899_0005959_1824_4199 712
6 3300037418 Ga0395900_0000009 Ga0395900_0000009_419509_421884 712
7 3300037466 Ga0395898_0009333 Ga0395898_0009333_5733_8108 712
8 3300037471 Ga0395905_0012712 Ga0395905_0012712_3520_5895 712
9 3300038443 Ga0395901_0000014 Ga0395901_0000014_370715_373090 712
10 3300039447 Ga0436361_0139780 Ga0436361_0139780_12072_14447 713
11 3300006881 Ga0068865_100001450 Ga0068865_10000145014 720
12 3300025938 Ga0207704_10001115 Ga0207704_100011157 720
13 3300009093 Ga0105240_10039416 Ga0105240_100394162 726
14 3300025913 Ga0207695_10027129 Ga0207695_100271294 726
15 3300028800 Ga0265338_10012096 Ga0265338_100120967 726
16 3300053087 Ga0500643_007611 Ga0500643_007611_556_2916 726
17 3300053108 Ga0500562_000743 Ga0500562_000743_5218_7578 726
18 3300053153 Ga0500616_0018548 Ga0500616_0018548_1263_3623 726
19 3300053730 Ga0500645_002156 Ga0500645_002156_4908_7268 726
20 3300031251 Ga0265327_10002750 Ga0265327_1000275011 727
21 3300047472 Ga0495686_0002336 Ga0495686_0002336_7903_10356 730
22 3300048924 Ga0496121_0000009 Ga0496121_0000009_598565_600940 730
23 3300005563 Ga0068855_100019278 Ga0068855_1000192783 732
24 3300049581 Ga0501047_0011141 Ga0501047_0011141_4519_6894 732
25 3300005336 Ga0070680_100042671 Ga0070680_1000426711 733
26 3300025949 Ga0207667_10014072 Ga0207667_100140725 733
27 3300049571 Ga0501034_0010740 Ga0501034_0010740_3492_5894 733
28 3300053136 Ga0500559_0000035 Ga0500559_0000035_27152_29575 733
29 3300005347 Ga0070668_100062925 Ga0070668_1000629251 734
30 3300005353 Ga0070669_100014108 Ga0070669_1000141083 734
31 3300005617 Ga0068859_100004814 Ga0068859_10000481411 734
32 3300005841 Ga0068863_100006919 Ga0068863_1000069194 734
33 3300006931 Ga0097620_100004813 Ga0097620_10000481311 734
34 3300009177 Ga0105248_10012795 Ga0105248_100127952 734
35 3300014325 Ga0163163_10010279 Ga0163163_100102794 734
36 3300014968 Ga0157379_10000787 Ga0157379_1000078721 734
37 3300025941 Ga0207711_10074543 Ga0207711_100745431 734
38 3300025986 Ga0207658_10020921 Ga0207658_100209213 734
39 3300026035 Ga0207703_10004797 Ga0207703_100047979 734
40 3300026088 Ga0207641_10008074 Ga0207641_100080746 734
41 3300003781 Ga0055536_1008504 Ga0055536_10085042 735
42 3300003794 Ga0055531_10009440 Ga0055531_100094403 735
43 3300026035 Ga0207703_10036695 Ga0207703_100366951 735
44 3300031995 Ga0307409_100064877 Ga0307409_1000648772 735
45 3300046524 Ga0495648_0000154 Ga0495648_0000154_42635_45058 735
46 3300009093 Ga0105240_10013799 Ga0105240_100137997 736
47 3300053108 Ga0500562_000841 Ga0500562_000841_1754_4153 736
48 3300053122 Ga0500608_001841 Ga0500608_001841_283_2622 736
49 3300009093 Ga0105240_10070984 Ga0105240_100709842 737
50 3300013307 Ga0157372_10083131 Ga0157372_100831312 737
51 3300053109 Ga0500569_003560 Ga0500569_003560_274_2634 737
52 3300053136 Ga0500559_0009715 Ga0500559_0009715_632_2974 737
53 3300005336 Ga0070680_100012327 Ga0070680_1000123273 738
54 3300053087 Ga0500643_000532 Ga0500643_000532_11248_13611 738
55 3300053096 Ga0500641_0000538 Ga0500641_0000538_5196_7559 738
56 3300053156 Ga0500622_0021035 Ga0500622_0021035_634_2997 738
57 3300053730 Ga0500645_000751 Ga0500645_000751_13159_15522 738
58 3300046515 Ga0495620_0019321 Ga0495620_0019321_734_3100 739
59 3300053080 Ga0500635_0000180 Ga0500635_0000180_16795_19197 739
60 3300053111 Ga0500572_000202 Ga0500572_000202_4831_7182 739
61 3300005331 Ga0070670_100017860 Ga0070670_1000178602 740
62 3300005844 Ga0068862_100006066 Ga0068862_1000060663 740
63 3300025304 Ga0209257_1000807 Ga0209257_100080725 740
64 3300025932 Ga0207690_10001699 Ga0207690_100016995 740
65 3300028380 Ga0268265_10009281 Ga0268265_100092812 740
66 3300028381 Ga0268264_10010538 Ga0268264_100105382 740
67 3300039447 Ga0436361_0038945 Ga0436361_0038945_750_3134 740
68 3300046616 Ga0495668_0000092 Ga0495668_0000092_43737_46076 740
69 3300049581 Ga0501047_0058575 Ga0501047_0058575_127_2475 740
70 3300049582 Ga0501048_0024643 Ga0501048_0024643_2019_4367 740
71 3300053156 Ga0500622_0005042 Ga0500622_0005042_3768_6110 740
72 3300005458 Ga0070681_10011884 Ga0070681_100118842 741
73 3300009177 Ga0105248_10005267 Ga0105248_1000526710 741
74 3300025913 Ga0207695_10003608 Ga0207695_100036087 741
75 3300046457 Ga0495590_0000292 Ga0495590_0000292_12144_14495 741
76 3300046518 Ga0495631_0018170 Ga0495631_0018170_693_3044 741
77 3300047472 Ga0495686_0003935 Ga0495686_0003935_5480_7831 741
78 3300048927 Ga0496124_0006726 Ga0496124_0006726_6744_9086 741
79 3300048928 Ga0496125_0053932 Ga0496125_0053932_735_3077 741
80 3300048929 Ga0496126_0001918 Ga0496126_0001918_12300_14642 741
81 3300050516 nmdc:mga0sz30_953_c1 nmdc:mga0sz30_953_c1_7226_9568 741
82 3300053086 Ga0500578_0000092 Ga0500578_0000092_41848_44199 741
83 3300053156 Ga0500622_0006240 Ga0500622_0006240_4553_6904 741
84 3300025292 Ga0209676_1000679 Ga0209676_100067947 742
85 3300025298 Ga0209050_1001452 Ga0209050_100145226 742
86 3300025304 Ga0209257_1000609 Ga0209257_100060934 742
87 3300037312 Ga0395899_0000070 Ga0395899_0000070_179670_182054 742
88 3300037418 Ga0395900_0012889 Ga0395900_0012889_1255_3615 743
89 3300037466 Ga0395898_0016901 Ga0395898_0016901_2159_4519 743
90 3300037471 Ga0395905_0015332 Ga0395905_0015332_3994_6357 743
91 3300046689 Ga0495613_0000461 Ga0495613_0000461_21479_23890 743
92 iso_pu_bacteria 2791355048 2792459569 743
93 3300021384 Ga0213876_10000129 Ga0213876_1000012949 744
94 3300027665 Ga0209983_1002741 Ga0209983_10027412 744
95 3300039437 Ga0436365_0218820 Ga0436365_0218820_24435_26804 744
96 iso_pu_bacteria 2643221545 2643748763 744
97 iso_pu_bacteria 2643221691 2644508328 744
98 3300006195 Ga0075366_10039012 Ga0075366_100390121 745
99 3300053156 Ga0500622_0009863 Ga0500622_0009863_1030_3393 745
100 iso_pu_bacteria 2582581280 2585154035 745
101 iso_pu_bacteria 2582581293 2585197431 745
102 iso_pu_bacteria 2585428106 2587916659 745
103 iso_pu_bacteria 2643221552 2643778545 745
104 iso_pu_bacteria 2643221583 2643924952 745
105 iso_pu_bacteria 2643221584 2643931302 745
106 iso_pu_bacteria 2643221640 2644225810 745
107 iso_pu_bacteria 2643221642 2644235299 745
108 iso_pu_bacteria 2818991435 2819535897 745
109 iso_pu_bacteria 2818991454 2819646129 745
110 iso_pu_bacteria 2843744320 2843747921 745
111 iso_pu_bacteria 2849560528 2849561518 745
112 iso_pu_bacteria 2849573788 2849574772 745
113 iso_pu_bacteria 2851153111 2851153661 745
114 iso_pu_bacteria 2857504554 2857506300 745
115 iso_pu_bacteria 2884960567 2884965048 745
116 iso_pu_bacteria 2898329390 2898329981 745
117 iso_pu_bacteria 2928531327 2928535324 745
118 3300003773 Ga0055537_1001496 Ga0055537_10014967 746
119 3300003775 Ga0055524_1005233 Ga0055524_10052334 746
120 3300003790 Ga0055528_1001015 Ga0055528_100101510 746
121 3300025263 Ga0209565_1000588 Ga0209565_100058817 746
122 3300025273 Ga0209673_1001270 Ga0209673_10012706 746
123 3300046460 Ga0495638_0016955 Ga0495638_0016955_2357_4723 746
124 3300046520 Ga0495637_0016349 Ga0495637_0016349_874_3246 746
125 3300046660 Ga0495625_0000080 Ga0495625_0000080_9069_11441 746
126 iso_pu_bacteria 2582581279 2585148710 746
127 3300003771 Ga0055526_1011343 Ga0055526_10113432 747
128 3300003794 Ga0055531_10007368 Ga0055531_100073682 747
129 3300005262 Ga0065165_1001393 Ga0065165_10013936 747
130 3300025295 Ga0209564_1008913 Ga0209564_10089132 747
131 3300025297 Ga0209758_1007407 Ga0209758_10074076 747
132 3300025299 Ga0209256_1005498 Ga0209256_10054982 747
133 3300025304 Ga0209257_1001485 Ga0209257_10014857 747
134 3300031251 Ga0265327_10000190 Ga0265327_1000019076 747
135 3300046453 Ga0495627_001176 Ga0495627_001176_7206_9677 747
136 3300046460 Ga0495638_0001201 Ga0495638_0001201_9742_12117 747
137 3300046460 Ga0495638_0009022 Ga0495638_0009022_1728_4103 747
138 3300046460 Ga0495638_0016155 Ga0495638_0016155_278_2755 747
139 3300046460 Ga0495638_0041266 Ga0495638_0041266_391_2763 747
140 3300046471 Ga0495650_0000007 Ga0495650_0000007_174446_176923 747
141 3300046506 Ga0495583_0000037 Ga0495583_0000037_80926_83301 747
142 3300046512 Ga0495610_0000205 Ga0495610_0000205_20251_22728 747
143 3300046513 Ga0495616_0000159 Ga0495616_0000159_19033_21408 747
144 3300046515 Ga0495620_0021549 Ga0495620_0021549_702_3077 747
145 3300046519 Ga0495632_0004374 Ga0495632_0004374_465_2840 747
146 3300046524 Ga0495648_0033247 Ga0495648_0033247_34_2511 747
147 3300046530 Ga0495654_0000100 Ga0495654_0000100_47461_49938 747
148 3300046660 Ga0495625_0001887 Ga0495625_0001887_7695_10070 747
149 3300046810 Ga0495660_0009962 Ga0495660_0009962_1623_3998 747
150 3300047320 Ga0495672_0001481 Ga0495672_0001481_16992_19469 747
151 3300047446 Ga0495679_016309 Ga0495679_016309_83_2473 747
152 3300047469 Ga0495673_0000132 Ga0495673_0000132_20430_22901 747
153 3300048910 Ga0496107_0000142 Ga0496107_0000142_20999_23374 747
154 3300049671 Ga0501238_000314 Ga0501238_000314_2584_4947 747
155 3300053087 Ga0500643_006158 Ga0500643_006158_263_2662 747
156 3300053088 Ga0500644_0000121 Ga0500644_0000121_36393_38816 747
157 3300053104 Ga0500556_0000865 Ga0500556_0000865_8379_10754 747
158 3300053125 Ga0500618_000418 Ga0500618_000418_6798_9188 747
159 3300053134 Ga0500658_0003130 Ga0500658_0003130_377_2752 747
160 3300053136 Ga0500559_0000921 Ga0500559_0000921_9361_11736 747
161 3300053142 Ga0500577_0002158 Ga0500577_0002158_640_3009 747
162 3300053730 Ga0500645_001947 Ga0500645_001947_4476_6851 747
163 3300053731 Ga0500609_000223 Ga0500609_000223_1504_3879 747
164 3300003781 Ga0055536_1008234 Ga0055536_10082342 748
165 3300005564 Ga0070664_100065807 Ga0070664_1000658072 748
166 3300006186 Ga0075369_10007179 Ga0075369_100071792 748
167 3300025292 Ga0209676_1000835 Ga0209676_10008353 748
168 3300025298 Ga0209050_1000807 Ga0209050_100080744 748
169 3300025304 Ga0209257_1007321 Ga0209257_10073212 748
170 3300025941 Ga0207711_10001583 Ga0207711_100015839 748
171 3300025945 Ga0207679_10016306 Ga0207679_100163063 748
172 3300028380 Ga0268265_10045725 Ga0268265_100457251 748
173 3300028573 Ga0265334_10020093 Ga0265334_100200932 748
174 3300028794 Ga0307515_10038227 Ga0307515_100382274 748
175 3300033180 Ga0307510_10034026 Ga0307510_100340262 748
176 3300046460 Ga0495638_0002205 Ga0495638_0002205_977_3448 748
177 3300046512 Ga0495610_0002896 Ga0495610_0002896_8476_10947 748
178 3300046660 Ga0495625_0021762 Ga0495625_0021762_1522_3915 748
179 3300047469 Ga0495673_0000363 Ga0495673_0000363_21170_23593 748
180 3300049459 Ga0495678_004445 Ga0495678_004445_1073_3544 748
181 3300053118 Ga0500594_0000410 Ga0500594_0000410_2633_5104 748
182 iso_pu_bacteria 2643221614 2644084882 748
183 iso_pu_bacteria 2643221661 2644342434 748
184 iso_pu_bacteria 2643221666 2644365734 748
185 3300025913 Ga0207695_10001655 Ga0207695_1000165513 749
186 3300046648 Ga0495611_0006258 Ga0495611_0006258_646_3039 749
187 3300003791 Ga0055530_10000140 Ga0055530_1000014043 750
188 3300003794 Ga0055531_10013636 Ga0055531_100136362 750
189 3300004625 Ga0055543_1004442 Ga0055543_10044422 750
190 3300005262 Ga0065165_1000412 Ga0065165_100041247 750
191 3300005331 Ga0070670_100000181 Ga0070670_10000018145 750
192 3300005347 Ga0070668_100000127 Ga0070668_10000012711 750
193 3300005347 Ga0070668_100003044 Ga0070668_1000030445 750
194 3300005367 Ga0070667_100000318 Ga0070667_10000031811 750
195 3300005548 Ga0070665_100001024 Ga0070665_10000102414 750
196 3300005618 Ga0068864_100000168 Ga0068864_10000016844 750
197 3300005841 Ga0068863_100000333 Ga0068863_10000033345 750
198 3300005843 Ga0068860_100000260 Ga0068860_10000026056 750
199 3300005843 Ga0068860_100000452 Ga0068860_10000045222 750
200 3300005844 Ga0068862_100000382 Ga0068862_10000038212 750
201 3300005844 Ga0068862_100003851 Ga0068862_1000038513 750
202 3300006042 Ga0075368_10001325 Ga0075368_100013252 750
203 3300006051 Ga0075364_10004765 Ga0075364_100047654 750
204 3300006178 Ga0075367_10005103 Ga0075367_100051033 750
205 3300009177 Ga0105248_10096373 Ga0105248_100963732 750
206 3300014968 Ga0157379_10005150 Ga0157379_100051503 750
207 3300025297 Ga0209758_1000528 Ga0209758_100052810 750
208 3300025298 Ga0209050_1000141 Ga0209050_100014160 750
209 3300025925 Ga0207650_10000201 Ga0207650_1000020160 750
210 3300025972 Ga0207668_10000036 Ga0207668_10000036104 750
211 3300025972 Ga0207668_10002642 Ga0207668_100026427 750
212 3300025986 Ga0207658_10000052 Ga0207658_1000005223 750
213 3300026088 Ga0207641_10005720 Ga0207641_100057203 750
214 3300026095 Ga0207676_10000286 Ga0207676_1000028621 750
215 3300028379 Ga0268266_10005430 Ga0268266_100054309 750
216 3300028380 Ga0268265_10003889 Ga0268265_100038895 750
217 3300028380 Ga0268265_10008570 Ga0268265_100085702 750
218 3300028381 Ga0268264_10000169 Ga0268264_1000016929 750
219 3300028381 Ga0268264_10001403 Ga0268264_1000140310 750
220 3300035695 Ga0373927_0006368 Ga0373927_0006368_4592_6979 750
221 3300037068 Ga0373925_0000061 Ga0373925_0000061_112088_114475 750
222 3300046684 Ga0495669_0000003 Ga0495669_0000003_158274_160658 750
223 3300049570 Ga0501033_0004173 Ga0501033_0004173_3207_5582 750
224 3300049823 Ga0501044_0001038 Ga0501044_0001038_278_2653 750
225 3300050490 nmdc:mga03n38_5177_c1 nmdc:mga03n38_5177_c1_307_2718 750
226 3300050491 nmdc:mga00v17_871_c1 nmdc:mga00v17_871_c1_12856_15267 750
227 3300053730 Ga0500645_000537 Ga0500645_000537_9066_11519 750
228 3300005347 Ga0070668_100000652 Ga0070668_1000006524 751
229 3300005355 Ga0070671_100049907 Ga0070671_1000499072 751
230 3300005366 Ga0070659_100001070 Ga0070659_10000107018 751
231 3300005548 Ga0070665_100057003 Ga0070665_1000570032 751
232 3300005618 Ga0068864_100000154 Ga0068864_10000015464 751
233 3300005841 Ga0068863_100000172 Ga0068863_10000017267 751
234 3300005842 Ga0068858_100000922 Ga0068858_1000009222 751
235 3300005844 Ga0068862_100045735 Ga0068862_1000457352 751
236 3300014968 Ga0157379_10048675 Ga0157379_100486752 751
237 3300025932 Ga0207690_10000053 Ga0207690_1000005311 751
238 3300025933 Ga0207706_10050475 Ga0207706_100504752 751
239 3300025972 Ga0207668_10000007 Ga0207668_1000000794 751
240 3300026035 Ga0207703_10000289 Ga0207703_100002892 751
241 3300026088 Ga0207641_10000160 Ga0207641_1000016092 751
242 3300026095 Ga0207676_10002350 Ga0207676_100023502 751
243 3300028379 Ga0268266_10003684 Ga0268266_1000368411 751
244 3300031456 Ga0307513_10000261 Ga0307513_1000026172 751
245 3300039437 Ga0436365_0633929 Ga0436365_0633929_977_3373 751
246 3300046506 Ga0495583_0019977 Ga0495583_0019977_930_3323 751
247 3300046522 Ga0495643_0008868 Ga0495643_0008868_3675_6077 751
248 3300046528 Ga0495642_0004663 Ga0495642_0004663_816_3206 751
249 3300046557 Ga0495622_0018168 Ga0495622_0018168_277_2679 751
250 3300046616 Ga0495668_0022223 Ga0495668_0022223_23_2425 751
251 3300047320 Ga0495672_0022137 Ga0495672_0022137_660_3053 751
252 3300048911 Ga0496108_0025807 Ga0496108_0025807_981_3374 751
253 3300053108 Ga0500562_000938 Ga0500562_000938_3673_6093 751
254 3300053119 Ga0500595_007867 Ga0500595_007867_1100_3502 751
255 3300053122 Ga0500608_018662 Ga0500608_018662_517_2919 751
256 3300053148 Ga0500590_023006 Ga0500590_023006_570_2972 751
257 3300053729 Ga0500625_009065 Ga0500625_009065_1544_3946 751
258 3300053735 Ga0500596_001419 Ga0500596_001419_1100_3502 751
259 3300005339 Ga0070660_100024893 Ga0070660_1000248932 752
260 3300005458 Ga0070681_10005988 Ga0070681_100059886 752
261 3300005530 Ga0070679_100006644 Ga0070679_1000066443 752
262 3300005539 Ga0068853_100016359 Ga0068853_1000163594 752
263 3300005548 Ga0070665_100000505 Ga0070665_10000050535 752
264 3300025919 Ga0207657_10000753 Ga0207657_1000075321 752
265 3300025921 Ga0207652_10005689 Ga0207652_100056892 752
266 3300026041 Ga0207639_10024018 Ga0207639_100240182 752
267 3300028379 Ga0268266_10000355 Ga0268266_1000035519 752
268 3300031456 Ga0307513_10006523 Ga0307513_100065232 752
269 3300013105 Ga0157369_10015433 Ga0157369_100154333 755
270 3300003578 Ga0006562J51391_1034973 Ga0006562J51391_10349731 756
271 3300046558 Ga0495633_0000871 Ga0495633_0000871_17908_20322 756
272 3300046694 Ga0495649_0000934 Ga0495649_0000934_6833_9250 756
273 3300048925 Ga0496122_0004328 Ga0496122_0004328_589_3003 756
274 3300048926 Ga0496123_0004305 Ga0496123_0004305_5736_8150 756

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00912

Transgly

Transglycosylase

94

273

0.96

PF00905

Transpeptidase

Penicillin binding protein transpeptidase domain

454

744

0.87

PF17092

PCB_OB

Penicillin-binding protein OB-like domain

360

452

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
3d3h-assembly1.cif.gz_A-2 crystal structure of a complex of the peptidoglycan glycosyltransferase domain from aquifex aeolicus and neryl moenomycin a 0.849 70 253
3nb7-assembly1.cif.gz_A-2 crystal structure of aquifex aeolicus peptidoglycan glycosyltransferase in complex with decarboxylated neryl moenomycin 0.842 70 253
3d3h-assembly1.cif.gz_A-2 crystal structure of a complex of the peptidoglycan glycosyltransferase domain from aquifex aeolicus and neryl moenomycin a 0.8354 70 253
2oqo-assembly1.cif.gz_A-2 crystal structure of a peptidoglycan glycosyltransferase from a class a pbp: insight into bacterial cell wall synthesis 0.83 65 253
2oqo-assembly1.cif.gz_A-2 crystal structure of a peptidoglycan glycosyltransferase from a class a pbp: insight into bacterial cell wall synthesis 0.8214 65 253
ID Description Score Start End Superfamily
4m4zA01 Mainly Beta;Roll;SH3 type barrels.;SH3 Domains 0.8706 356 380 2.30.30.40
3fwmA02 Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like 0.8556 67 235 1.10.3810.10
2r7dB03 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8554 355 404 2.40.50.140
3d3hA00 Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like 0.849 70 253 1.10.3810.10
af_P02918_397_833_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8391 395 732 3.40.710.10
ID Description Score Start End GO Terms
AF-A0A7Z9WS75-F1-model_v4 Peptidase 0.9546 618 729 GO:0008360
GO:0008658
GO:0008955
GO:0009252
GO:0030288
GO:0071555
AF-A0A376Y2D1-F1-model_v4 Penicillin-binding protein 1A 0.9245 461 586 GO:0008360
GO:0008658
GO:0008955
GO:0009252
GO:0030288
GO:0071555
AF-A0A832ADM6-F1-model_v4 Penicillin-binding protein 0.9094 420 715 GO:0008360
GO:0008658
GO:0008955
GO:0009252
GO:0030288
GO:0071555
AF-A0A640QMF8-F1-model_v4 peptidoglycan glycosyltransferase (EC 2.4.99.28) 0.8964 438 714 GO:0008360
GO:0008658
GO:0008955
GO:0009252
GO:0016020
GO:0030288
GO:0071555
AF-A0A526QFY7-F1-model_v4 Penicillin-binding protein 0.8894 535 731 GO:0008360
GO:0008658
GO:0008955
GO:0009252
GO:0030288
GO:0071555

Feature Viewer

pLDDT pTM Quality
77.94 0.66 Medium
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Predicted Structure (AlphaFold2)

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