F374632

General Info

Members Datasets Scaffolds Average Seq Length
267 208 256 139

Family's Representative Sequence

Representative Sequence 3300005548|Ga0070665_100100549|Ga0070665_1001005493
Length 139
Sequence LDGEFDGSNVRELRPRPPETEKITINLGYVDLGQVDLKVQEGFYSNRTDFIRTAIRNQLERHADVVKQSTVRKSLDLGLRNYSRAERAGEMLHINVFGLATIAHDVTADLARATIASVSVLGAFHATPAVKAALADRTR

Samples

Sample ID Description Type Environment
1 2513237140 Sinorhizobium meliloti GVPV12 Isolate Nodule
2 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
3 2802428858 Sinorhizobium medicae M14-1 Isolate Nodule
4 2802428862 Sinorhizobium medicae M7-4 Isolate Nodule
5 2842733646 Variovorax sp. R-72446 Isolate Unclassified
6 2848297114 Croceibacterium ferulae EGI 63111 Isolate Unclassified
7 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
8 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
9 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
10 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
31 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
39 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
40 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
46 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
47 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
48 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
49 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
50 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
51 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
52 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
53 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
54 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
55 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
56 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
57 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
60 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
63 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
64 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
65 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
66 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
67 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
68 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
71 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
72 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
73 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
74 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
75 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
76 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
77 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
78 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
79 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
80 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
81 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
82 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
111 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
112 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
116 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
117 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
118 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
119 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
120 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
121 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
122 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
123 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
124 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
125 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
126 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
127 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
128 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
129 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
130 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
131 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
132 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
133 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
134 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
135 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
136 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
137 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
138 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
139 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
140 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
141 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
142 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
143 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
144 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
145 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
146 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
147 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
148 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
149 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
150 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
151 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
152 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
153 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
154 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
155 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
156 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
157 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
158 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
159 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
160 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
161 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
162 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
163 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
164 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
165 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
166 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
167 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
168 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
169 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
170 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
171 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
172 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
173 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
174 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
175 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
176 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
177 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
178 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
179 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
180 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
181 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
182 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
183 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
184 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
185 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
186 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
187 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
188 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
189 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
190 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
191 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
192 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
193 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
194 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
195 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
196 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
197 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
198 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
199 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
200 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
201 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
202 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
203 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
204 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
205 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
206 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
207 8024479707 Rhizobium leguminosarum Tri-43 Isolate Nodule
208 8045864390 Aurantimonas endophytica KCTC 52296 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.51
Metatranscriptomes 0.37
Isolates 4.12

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.99
Nodule 1.87
Rhizoplane 8.24
Rhizosphere 77.9
Stem 0
Stem Tuber 0
Unclassified 5.99

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10051108 3300002459 Bacteria 853
2 Ga0068869_100130641 3300005334 Bacteria 1930
3 Ga0070682_100167684 3300005337 Bacteria 1523
4 Ga0070691_10406118 3300005341 Bacteria 768
5 Ga0070692_10251077 3300005345 Bacteria 1059
6 Ga0070668_100022871 3300005347 Bacteria 4726
7 Ga0070668_100420144 3300005347 Bacteria 1145
8 Ga0070669_100013309 3300005353 Bacteria 5847
9 Ga0070671_100148986 3300005355 Bacteria 1975
10 Ga0070674_100067812 3300005356 Bacteria 2511
11 Ga0070688_100045949 3300005365 Bacteria 2702
12 Ga0070688_100302960 3300005365 Bacteria 1156
13 Ga0070659_101347132 3300005366 Bacteria 634
14 Ga0070700_100023110 3300005441 Bacteria 3635
15 Ga0070700_101306778 3300005441 Bacteria 610
16 Ga0070700_101340100 3300005441 Bacteria 603
17 Ga0070678_100736033 3300005456 Bacteria 891
18 Ga0070662_100886522 3300005457 Bacteria 761
19 Ga0068867_100011080 3300005459 Bacteria 6361
20 Ga0068867_100164718 3300005459 Bacteria 1751
21 Ga0070707_100340651 3300005468 Bacteria 1456
22 Ga0070698_100053564 3300005471 Bacteria 4100
23 Ga0070684_100611930 3300005535 Bacteria 1013
24 Ga0070697_100767845 3300005536 Bacteria 852
25 Ga0068853_100419319 3300005539 Bacteria 1255
26 Ga0070686_100054703 3300005544 Bacteria 2554
27 Ga0070686_100727156 3300005544 Bacteria 794
28 Ga0070693_100363590 3300005547 Bacteria 994
29 Ga0070665_100020224 3300005548 Bacteria 6684
30 Ga0070665_100100549 3300005548 Bacteria 2896
31 Ga0070704_100447545 3300005549 Bacteria 1111
32 Ga0068857_100312874 3300005577 Bacteria 1449
33 Ga0068856_101038272 3300005614 Bacteria 838
34 Ga0068852_101648245 3300005616 Bacteria 664
35 Ga0068859_100821045 3300005617 Bacteria 1017
36 Ga0068866_10779728 3300005718 Bacteria 663
37 Ga0068851_10053602 3300005834 Bacteria 2054
38 Ga0068870_10551569 3300005840 Bacteria 776
39 Ga0068863_100456348 3300005841 Bacteria 1255
40 Ga0068858_100133358 3300005842 Bacteria 2330
41 Ga0068858_101597499 3300005842 Bacteria 643
42 Ga0068860_100205285 3300005843 Bacteria 1911
43 Ga0068860_101204027 3300005843 Bacteria 778
44 Ga0068862_100018862 3300005844 Bacteria 5748
45 Ga0070717_10271698 3300006028 Bacteria 1502
46 Ga0070717_10327690 3300006028 Bacteria 1365
47 Ga0070717_10682136 3300006028 Bacteria 933
48 Ga0075365_10795973 3300006038 Bacteria 667
49 Ga0075365_11210917 3300006038 Bacteria 531
50 Ga0075364_10538444 3300006051 Unclassified 798
51 Ga0070712_101096961 3300006175 Bacteria 691
52 Ga0075366_10288007 3300006195 Bacteria 1004
53 Ga0075370_10021888 3300006353 Bacteria 3505
54 Ga0068871_100771161 3300006358 Unclassified 885
55 Ga0068871_100831569 3300006358 Bacteria 853
56 Ga0075428_100581273 3300006844 Bacteria 1197
57 Ga0075430_100278017 3300006846 Bacteria 1385
58 Ga0075431_100074936 3300006847 Bacteria 3492
59 Ga0075433_10662674 3300006852 Bacteria 915
60 Ga0075434_100518305 3300006871 Bacteria 1212
61 Ga0068865_100005533 3300006881 Bacteria 7663
62 Ga0068865_100025334 3300006881 Bacteria 3901
63 Ga0097620_100821093 3300006931 Bacteria 1017
64 Ga0097620_101763465 3300006931 Unclassified 684
65 Ga0075435_100066170 3300007076 Bacteria 2939
66 Ga0105240_10817880 3300009093 Bacteria 1008
67 Ga0111539_10575238 3300009094 Bacteria 1312
68 Ga0105245_11472999 3300009098 Bacteria 731
69 Ga0105247_10011936 3300009101 Bacteria 5222
70 Ga0105243_10667127 3300009148 Bacteria 1010
71 Ga0105241_11745151 3300009174 Bacteria 606
72 Ga0105242_10029995 3300009176 Bacteria 4341
73 Ga0105242_10364284 3300009176 Bacteria 1339
74 Ga0105248_10063209 3300009177 Bacteria 4155
75 Ga0105248_10642850 3300009177 Bacteria 1197
76 Ga0105238_10335590 3300009551 Bacteria 1499
77 Ga0105238_10946599 3300009551 Bacteria 881
78 Ga0105239_10048674 3300010375 Bacteria 4648
79 Ga0105239_10206115 3300010375 Bacteria 2203
80 Ga0105239_10242331 3300010375 Bacteria 2024
81 Ga0105246_10119588 3300011119 Bacteria 1949
82 Ga0105246_10683221 3300011119 Bacteria 897
83 Ga0157373_10640059 3300013100 Bacteria 776
84 Ga0163162_11632070 3300013306 Bacteria 736
85 Ga0157375_10003238 3300013308 Bacteria 14128
86 Ga0163163_10285380 3300014325 Bacteria 1703
87 Ga0163163_10329394 3300014325 Bacteria 1581
88 Ga0157380_11221101 3300014326 Bacteria 796
89 Ga0157380_11984145 3300014326 Bacteria 644
90 Ga0157377_10009067 3300014745 Bacteria 4875
91 Ga0157377_10681890 3300014745 Bacteria 744
92 Ga0157379_10053634 3300014968 Bacteria 3602
93 Ga0157376_10079438 3300014969 Bacteria 2812
94 Ga0163161_10025849 3300017792 Bacteria 4157
95 Ga0213876_10085030 3300021384 Bacteria 1674
96 Ga0213875_10285946 3300021388 Bacteria 779
97 Ga0207642_10275006 3300025899 Bacteria 966
98 Ga0207680_10326793 3300025903 Bacteria 1073
99 Ga0207647_10170901 3300025904 Bacteria 1265
100 Ga0207699_10463010 3300025906 Bacteria 911
101 Ga0207645_10210525 3300025907 Bacteria 1280
102 Ga0207693_10664725 3300025915 Unclassified 809
103 Ga0207660_10720767 3300025917 Bacteria 814
104 Ga0207662_10025439 3300025918 Bacteria 3409
105 Ga0207681_10025231 3300025923 Bacteria 3821
106 Ga0207659_10969385 3300025926 Bacteria 731
107 Ga0207687_10724865 3300025927 Bacteria 845
108 Ga0207690_10482683 3300025932 Bacteria 1000
109 Ga0207690_10574669 3300025932 Bacteria 918
110 Ga0207706_10120404 3300025933 Bacteria 2308
111 Ga0207706_10164439 3300025933 Bacteria 1950
112 Ga0207670_10507412 3300025936 Bacteria 980
113 Ga0207704_10012849 3300025938 Bacteria 4168
114 Ga0207665_10258789 3300025939 Unclassified 1288
115 Ga0207691_10337943 3300025940 Bacteria 1289
116 Ga0207689_10083102 3300025942 Bacteria 2633
117 Ga0207689_10204311 3300025942 Bacteria 1631
118 Ga0207679_11110302 3300025945 Bacteria 725
119 Ga0207668_10094680 3300025972 Bacteria 2203
120 Ga0207703_10163120 3300026035 Bacteria 1953
121 Ga0207703_11794367 3300026035 Bacteria 589
122 Ga0207703_12008995 3300026035 Bacteria 554
123 Ga0207678_10484249 3300026067 Bacteria 1077
124 Ga0207678_12007157 3300026067 Bacteria 503
125 Ga0207708_10005903 3300026075 Bacteria 9059
126 Ga0207708_11365474 3300026075 Bacteria 621
127 Ga0207648_10012170 3300026089 Bacteria 8061
128 Ga0207648_10112146 3300026089 Bacteria 2394
129 Ga0207674_10061632 3300026116 Bacteria 3789
130 Ga0207674_10360153 3300026116 Bacteria 1406
131 Ga0207675_100020995 3300026118 Bacteria 6088
132 Ga0207675_101593923 3300026118 Bacteria 673
133 Ga0207675_101695340 3300026118 Bacteria 652
134 Ga0207683_10067408 3300026121 Bacteria 3157
135 Ga0207698_11079477 3300026142 Bacteria 815
136 Ga0209968_1023240 3300027526 Bacteria 1013
137 Ga0209813_10295724 3300027866 Bacteria 628
138 Ga0209974_10392776 3300027876 Bacteria 543
139 Ga0268266_10077907 3300028379 Bacteria 2883
140 Ga0268265_10014708 3300028380 Bacteria 5338
141 Ga0268265_10667527 3300028380 Bacteria 1001
142 Ga0307515_10000645 3300028794 Bacteria 80548
143 Ga0265328_10007704 3300031239 Bacteria 4477
144 Ga0316575_10086566 3300031665 Bacteria 1266
145 Ga0316579_10212112 3300031691 Bacteria 936
146 Ga0265314_10096388 3300031711 Bacteria 1913
147 Ga0316578_10024491 3300031728 Bacteria 3386
148 Ga0316577_10150968 3300031733 Bacteria 1309
149 Ga0316583_10022094 3300032133 Bacteria 2280
150 Ga0316585_10143554 3300032137 Bacteria 787
151 Ga0316580_10059454 3300032139 Bacteria 1174
152 Ga0316596_1231772 3300033541 Bacteria 518
153 Ga0373956_0056095 3300035119 Bacteria 1778
154 Ga0373943_0580907 3300035170 Bacteria 659
155 Ga0373943_0815084 3300035170 Bacteria 556
156 Ga0373962_0015381 3300035242 Bacteria 1961
157 Ga0316574_0011864 3300035398 Bacteria 4966
158 Ga0373935_0167920 3300035692 Bacteria 1499
159 Ga0373947_0363443 3300035725 Bacteria 972
160 Ga0373937_0923667 3300036401 Bacteria 821
161 Ga0316582_0023867 3300036647 Bacteria 3649
162 Ga0316584_0069025 3300036712 Bacteria 2649
163 Ga0373925_0487554 3300037068 Bacteria 1011
164 Ga0395905_0000108 3300037471 Bacteria 138234
165 Ga0316581_0118095 3300037588 Bacteria 817
166 Ga0436364_0398557 3300037853 Bacteria 3848
167 Ga0436364_0690481 3300037853 Unclassified 723
168 Ga0436364_1394561 3300037853 Bacteria 632
169 Ga0436365_1128855 3300039437 Bacteria 1063
170 Ga0436365_1934799 3300039437 Bacteria 1160
171 Ga0436361_0341947 3300039447 Bacteria 3659
172 Ga0436362_0594428 3300039453 Bacteria 622
173 Ga0451802_0851147 3300041460 Bacteria 928
174 Ga0451837_0460174 3300041494 Bacteria 874
175 Ga0450902_082762 3300042137 Bacteria 565
176 Ga0439460_0076045 3300042461 Bacteria 1047
177 Ga0451577_0393590 3300042876 Bacteria 1258
178 Ga0453683_0528178 3300044673 Bacteria 767
179 Ga0466960_0715049 3300044901 Bacteria 602
180 Ga0495580_0563346 3300046472 Bacteria 756
181 Ga0495582_0739774 3300046473 Bacteria 569
182 Ga0495584_0074699 3300046491 Bacteria 1704
183 Ga0495628_0905327 3300046516 Bacteria 612
184 Ga0495652_1093060 3300046529 Bacteria 518
185 Ga0495640_0344552 3300046533 Bacteria 920
186 Ga0495597_0000019 3300046542 Bacteria 164636
187 Ga0495659_0063004 3300046664 Bacteria 1374
188 Ga0495661_0242204 3300046665 Bacteria 925
189 Ga0495581_0166019 3300047315 Bacteria 1291
190 Ga0495604_0582791 3300047317 Bacteria 719
191 Ga0495636_0169377 3300047318 Bacteria 987
192 Ga0495674_0278501 3300047319 Bacteria 1371
193 Ga0495684_0174768 3300047471 Bacteria 1595
194 Ga0495686_0000293 3300047472 Bacteria 87130
195 Ga0495602_0464779 3300048088 Bacteria 891
196 Ga0496100_0008476 3300048903 Bacteria 5734
197 Ga0496100_0236989 3300048903 Bacteria 1345
198 Ga0496100_0674043 3300048903 Bacteria 806
199 Ga0496101_0092422 3300048904 Bacteria 2252
200 Ga0496101_0158438 3300048904 Bacteria 1735
201 Ga0496102_0667848 3300048905 Bacteria 962
202 Ga0496102_0915558 3300048905 Bacteria 798
203 Ga0496103_0169388 3300048906 Bacteria 1402
204 Ga0496104_0052819 3300048907 Bacteria 3838
205 Ga0496106_0011842 3300048909 Bacteria 6437
206 Ga0496106_0622502 3300048909 Bacteria 864
207 Ga0496107_0029284 3300048910 Bacteria 3916
208 Ga0496107_0047895 3300048910 Bacteria 3078
209 Ga0496110_0474994 3300048913 Bacteria 1139
210 Ga0496111_0110898 3300048914 Bacteria 2020
211 Ga0496111_0235778 3300048914 Bacteria 1359
212 Ga0496111_0687889 3300048914 Bacteria 745
213 Ga0496113_0043066 3300048916 Bacteria 3338
214 Ga0496114_0094965 3300048917 Bacteria 2537
215 Ga0496115_0074738 3300048918 Bacteria 2752
216 Ga0496115_0178608 3300048918 Bacteria 1755
217 Ga0496126_0953554 3300048929 Bacteria 647
218 Ga0501036_0115308 3300049572 Bacteria 2270
219 Ga0501036_0162938 3300049572 Bacteria 1880
220 Ga0501037_0317683 3300049573 Bacteria 1079
221 Ga0501039_0605165 3300049575 Bacteria 859
222 Ga0501042_0124974 3300049578 Bacteria 1852
223 Ga0501046_0219883 3300049580 Bacteria 1407
224 Ga0501048_0064541 3300049582 Bacteria 2590
225 Ga0501048_0164188 3300049582 Bacteria 1572
226 Ga0501068_0751438 3300049584 Bacteria 639
227 Ga0501069_0416977 3300049585 Bacteria 796
228 Ga0501071_0113698 3300049587 Bacteria 2002
229 Ga0501072_0074643 3300049588 Bacteria 2682
230 Ga0501075_0283635 3300049591 Bacteria 1262
231 Ga0501075_0654784 3300049591 Bacteria 801
232 Ga0501076_0071475 3300049592 Bacteria 2776
233 Ga0501076_0168442 3300049592 Bacteria 1785
234 Ga0501077_0008172 3300049593 Bacteria 6468
235 Ga0501077_0139384 3300049593 Bacteria 1538
236 Ga0501077_0194936 3300049593 Bacteria 1287
237 Ga0501079_0067555 3300049741 Bacteria 2759
238 Ga0501079_0156908 3300049741 Bacteria 1774
239 Ga0501080_0899430 3300049742 Bacteria 772
240 Ga0501080_1018230 3300049742 Bacteria 718
241 Ga0501081_0077065 3300049743 Bacteria 2329
242 Ga0501035_0770029 3300049822 Bacteria 771
243 nmdc:mga03n38_20651_c1 3300050490 Bacteria 2639
244 nmdc:mga0yw44_1154603_c1 3300050492 Bacteria 523
245 nmdc:mga0yw44_742025_c1 3300050492 Bacteria 667
246 nmdc:mga0k408_460347_c1 3300050493 Bacteria 755
247 nmdc:mga06z11_20256_c1 3300050494 Bacteria 3072
248 nmdc:mga04h51_500841_c1 3300050495 Bacteria 519
249 nmdc:mga07m45_12452_c1 3300050496 Bacteria 4496
250 nmdc:mga05p37_237698_c1 3300050507 Bacteria 2192
251 Ga0500594_0009577 3300053118 Unclassified 2235
252 Ga0500559_0000095 3300053136 Bacteria 71223
253 Ga0500577_0182821 3300053142 Bacteria 900
254 Ga0501084_0050328 3300054114 Bacteria 3487
255 Ga0501084_0554826 3300054114 Bacteria 971
256 Ga0530510_0377895 3300061734 Bacteria 1066

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005468 Ga0070707_100340651 Ga0070707_1003406512 131
2 3300005471 Ga0070698_100053564 Ga0070698_1000535643 131
3 3300005536 Ga0070697_100767845 Ga0070697_1007678452 131
4 3300006028 Ga0070717_10327690 Ga0070717_103276901 131
5 3300006358 Ga0068871_100771161 Ga0068871_1007711612 132
6 3300028794 Ga0307515_10000645 Ga0307515_1000064569 132
7 3300037853 Ga0436364_0690481 Ga0436364_0690481_75_500 132
8 3300037853 Ga0436364_1394561 Ga0436364_1394561_130_543 132
9 3300041494 Ga0451837_0460174 Ga0451837_0460174_235_636 132
10 3300044673 Ga0453683_0528178 Ga0453683_0528178_256_654 132
11 3300046516 Ga0495628_0905327 Ga0495628_0905327_144_563 132
12 3300047317 Ga0495604_0582791 Ga0495604_0582791_166_585 132
13 3300047472 Ga0495686_0000293 Ga0495686_0000293_6516_6929 132
14 3300048903 Ga0496100_0674043 Ga0496100_0674043_247_666 132
15 3300048905 Ga0496102_0915558 Ga0496102_0915558_223_642 132
16 3300048909 Ga0496106_0622502 Ga0496106_0622502_49_468 132
17 iso_pu_bacteria 2842733646 2842738138 132
18 iso_pu_bacteria 8045864390 8045864710 132
19 3300048929 Ga0496126_0953554 Ga0496126_0953554_201_632 133
20 iso_pu_bacteria 2751185897 2753767827 133
21 iso_pu_bacteria 2802428858 2802717301 133
22 iso_pu_bacteria 2802428862 2802743213 133
23 iso_pu_bacteria 2848297114 2848298696 133
24 3300005548 Ga0070665_100100549 Ga0070665_1001005493 134
25 3300006871 Ga0075434_100518305 Ga0075434_1005183052 134
26 3300007076 Ga0075435_100066170 Ga0075435_1000661704 134
27 3300009174 Ga0105241_11745151 Ga0105241_117451511 134
28 3300009551 Ga0105238_10946599 Ga0105238_109465992 134
29 3300025906 Ga0207699_10463010 Ga0207699_104630102 134
30 3300025939 Ga0207665_10258789 Ga0207665_102587892 134
31 3300028379 Ga0268266_10077907 Ga0268266_100779073 134
32 3300041460 Ga0451802_0851147 Ga0451802_0851147_468_908 134
33 3300050490 nmdc:mga03n38_20651_c1 nmdc:mga03n38_20651_c1_56_475 134
34 3300050494 nmdc:mga06z11_20256_c1 nmdc:mga06z11_20256_c1_1201_1620 134
35 3300005347 Ga0070668_100022871 Ga0070668_1000228714 135
36 3300005353 Ga0070669_100013309 Ga0070669_1000133097 135
37 3300005441 Ga0070700_100023110 Ga0070700_1000231102 135
38 3300005459 Ga0068867_100011080 Ga0068867_1000110802 135
39 3300005844 Ga0068862_100018862 Ga0068862_1000188622 135
40 3300006846 Ga0075430_100278017 Ga0075430_1002780172 135
41 3300006881 Ga0068865_100025334 Ga0068865_1000253346 135
42 3300014326 Ga0157380_11984145 Ga0157380_119841452 135
43 3300025907 Ga0207645_10210525 Ga0207645_102105252 135
44 3300025923 Ga0207681_10025231 Ga0207681_100252311 135
45 3300026075 Ga0207708_10005903 Ga0207708_100059037 135
46 3300026089 Ga0207648_10012170 Ga0207648_100121707 135
47 3300026116 Ga0207674_10061632 Ga0207674_100616323 135
48 3300026118 Ga0207675_100020995 Ga0207675_1000209957 135
49 3300027526 Ga0209968_1023240 Ga0209968_10232402 135
50 3300028380 Ga0268265_10014708 Ga0268265_100147082 135
51 3300035119 Ga0373956_0056095 Ga0373956_0056095_12_419 135
52 3300037853 Ga0436364_0398557 Ga0436364_0398557_1772_2179 135
53 3300042461 Ga0439460_0076045 Ga0439460_0076045_618_1028 135
54 3300046542 Ga0495597_0000019 Ga0495597_0000019_74434_74841 135
55 iso_pu_bacteria 2513237140 2513885278 135
56 iso_pu_bacteria 2894232714 2894235300 135
57 iso_pu_bacteria 2902405164 2902407969 135
58 iso_pu_bacteria 3003665799 3003668453 135
59 3300031711 Ga0265314_10096388 Ga0265314_100963881 136
60 3300005834 Ga0068851_10053602 Ga0068851_100536022 137
61 3300044901 Ga0466960_0715049 Ga0466960_0715049_92_508 137
62 iso_pu_bacteria 8024479707 8024484626 137
63 3300006038 Ga0075365_10795973 Ga0075365_107959732 138
64 3300006852 Ga0075433_10662674 Ga0075433_106626742 138
65 3300006881 Ga0068865_100005533 Ga0068865_1000055335 138
66 3300009176 Ga0105242_10029995 Ga0105242_100299955 138
67 3300010375 Ga0105239_10048674 Ga0105239_100486745 138
68 3300014745 Ga0157377_10009067 Ga0157377_100090675 138
69 3300017792 Ga0163161_10025849 Ga0163161_100258491 138
70 3300025899 Ga0207642_10275006 Ga0207642_102750061 138
71 3300025918 Ga0207662_10025439 Ga0207662_100254394 138
72 3300025938 Ga0207704_10012849 Ga0207704_100128493 138
73 3300025942 Ga0207689_10204311 Ga0207689_102043112 138
74 3300035242 Ga0373962_0015381 Ga0373962_0015381_135_563 138
75 3300037471 Ga0395905_0000108 Ga0395905_0000108_8541_8957 138
76 3300050492 nmdc:mga0yw44_742025_c1 nmdc:mga0yw44_742025_c1_179_595 138
77 3300050507 nmdc:mga05p37_237698_c1 nmdc:mga05p37_237698_c1_1755_2171 138
78 3300053142 Ga0500577_0182821 Ga0500577_0182821_319_741 138
79 3300002459 JGI24751J29686_10051108 JGI24751J29686_100511081 139
80 3300005334 Ga0068869_100130641 Ga0068869_1001306412 139
81 3300005337 Ga0070682_100167684 Ga0070682_1001676842 139
82 3300005341 Ga0070691_10406118 Ga0070691_104061182 139
83 3300005345 Ga0070692_10251077 Ga0070692_102510771 139
84 3300005347 Ga0070668_100420144 Ga0070668_1004201442 139
85 3300005355 Ga0070671_100148986 Ga0070671_1001489862 139
86 3300005356 Ga0070674_100067812 Ga0070674_1000678123 139
87 3300005365 Ga0070688_100045949 Ga0070688_1000459493 139
88 3300005365 Ga0070688_100302960 Ga0070688_1003029602 139
89 3300005366 Ga0070659_101347132 Ga0070659_1013471321 139
90 3300005441 Ga0070700_101306778 Ga0070700_1013067781 139
91 3300005441 Ga0070700_101340100 Ga0070700_1013401001 139
92 3300005456 Ga0070678_100736033 Ga0070678_1007360332 139
93 3300005457 Ga0070662_100886522 Ga0070662_1008865221 139
94 3300005459 Ga0068867_100164718 Ga0068867_1001647181 139
95 3300005535 Ga0070684_100611930 Ga0070684_1006119302 139
96 3300005539 Ga0068853_100419319 Ga0068853_1004193192 139
97 3300005544 Ga0070686_100054703 Ga0070686_1000547031 139
98 3300005544 Ga0070686_100727156 Ga0070686_1007271562 139
99 3300005547 Ga0070693_100363590 Ga0070693_1003635902 139
100 3300005548 Ga0070665_100020224 Ga0070665_1000202247 139
101 3300005549 Ga0070704_100447545 Ga0070704_1004475451 139
102 3300005577 Ga0068857_100312874 Ga0068857_1003128742 139
103 3300005614 Ga0068856_101038272 Ga0068856_1010382722 139
104 3300005616 Ga0068852_101648245 Ga0068852_1016482452 139
105 3300005617 Ga0068859_100821045 Ga0068859_1008210452 139
106 3300005718 Ga0068866_10779728 Ga0068866_107797282 139
107 3300005840 Ga0068870_10551569 Ga0068870_105515692 139
108 3300005841 Ga0068863_100456348 Ga0068863_1004563482 139
109 3300005842 Ga0068858_100133358 Ga0068858_1001333582 139
110 3300005842 Ga0068858_101597499 Ga0068858_1015974991 139
111 3300005843 Ga0068860_100205285 Ga0068860_1002052853 139
112 3300005843 Ga0068860_101204027 Ga0068860_1012040272 139
113 3300006028 Ga0070717_10271698 Ga0070717_102716982 139
114 3300006028 Ga0070717_10682136 Ga0070717_106821361 139
115 3300006038 Ga0075365_11210917 Ga0075365_112109171 139
116 3300006051 Ga0075364_10538444 Ga0075364_105384442 139
117 3300006175 Ga0070712_101096961 Ga0070712_1010969612 139
118 3300006195 Ga0075366_10288007 Ga0075366_102880072 139
119 3300006353 Ga0075370_10021888 Ga0075370_100218883 139
120 3300006358 Ga0068871_100831569 Ga0068871_1008315692 139
121 3300006844 Ga0075428_100581273 Ga0075428_1005812732 139
122 3300006847 Ga0075431_100074936 Ga0075431_1000749363 139
123 3300006931 Ga0097620_100821093 Ga0097620_1008210932 139
124 3300006931 Ga0097620_101763465 Ga0097620_1017634652 139
125 3300009093 Ga0105240_10817880 Ga0105240_108178802 139
126 3300009094 Ga0111539_10575238 Ga0111539_105752382 139
127 3300009098 Ga0105245_11472999 Ga0105245_114729991 139
128 3300009101 Ga0105247_10011936 Ga0105247_100119362 139
129 3300009148 Ga0105243_10667127 Ga0105243_106671272 139
130 3300009176 Ga0105242_10364284 Ga0105242_103642843 139
131 3300009177 Ga0105248_10063209 Ga0105248_100632093 139
132 3300009177 Ga0105248_10642850 Ga0105248_106428502 139
133 3300009551 Ga0105238_10335590 Ga0105238_103355902 139
134 3300010375 Ga0105239_10206115 Ga0105239_102061152 139
135 3300010375 Ga0105239_10242331 Ga0105239_102423313 139
136 3300011119 Ga0105246_10119588 Ga0105246_101195882 139
137 3300011119 Ga0105246_10683221 Ga0105246_106832212 139
138 3300013100 Ga0157373_10640059 Ga0157373_106400592 139
139 3300013306 Ga0163162_11632070 Ga0163162_116320701 139
140 3300013308 Ga0157375_10003238 Ga0157375_100032387 139
141 3300014325 Ga0163163_10285380 Ga0163163_102853803 139
142 3300014325 Ga0163163_10329394 Ga0163163_103293943 139
143 3300014326 Ga0157380_11221101 Ga0157380_112211012 139
144 3300014745 Ga0157377_10681890 Ga0157377_106818901 139
145 3300014968 Ga0157379_10053634 Ga0157379_100536342 139
146 3300014969 Ga0157376_10079438 Ga0157376_100794382 139
147 3300021384 Ga0213876_10085030 Ga0213876_100850302 139
148 3300021388 Ga0213875_10285946 Ga0213875_102859462 139
149 3300025903 Ga0207680_10326793 Ga0207680_103267931 139
150 3300025904 Ga0207647_10170901 Ga0207647_101709012 139
151 3300025915 Ga0207693_10664725 Ga0207693_106647252 139
152 3300025917 Ga0207660_10720767 Ga0207660_107207671 139
153 3300025926 Ga0207659_10969385 Ga0207659_109693852 139
154 3300025927 Ga0207687_10724865 Ga0207687_107248651 139
155 3300025932 Ga0207690_10482683 Ga0207690_104826832 139
156 3300025932 Ga0207690_10574669 Ga0207690_105746691 139
157 3300025933 Ga0207706_10120404 Ga0207706_101204043 139
158 3300025933 Ga0207706_10164439 Ga0207706_101644391 139
159 3300025936 Ga0207670_10507412 Ga0207670_105074122 139
160 3300025940 Ga0207691_10337943 Ga0207691_103379433 139
161 3300025942 Ga0207689_10083102 Ga0207689_100831023 139
162 3300025945 Ga0207679_11110302 Ga0207679_111103022 139
163 3300025972 Ga0207668_10094680 Ga0207668_100946803 139
164 3300026035 Ga0207703_10163120 Ga0207703_101631201 139
165 3300026035 Ga0207703_11794367 Ga0207703_117943671 139
166 3300026035 Ga0207703_12008995 Ga0207703_120089952 139
167 3300026067 Ga0207678_10484249 Ga0207678_104842491 139
168 3300026067 Ga0207678_12007157 Ga0207678_120071571 139
169 3300026075 Ga0207708_11365474 Ga0207708_113654742 139
170 3300026089 Ga0207648_10112146 Ga0207648_101121461 139
171 3300026116 Ga0207674_10360153 Ga0207674_103601532 139
172 3300026118 Ga0207675_101593923 Ga0207675_1015939232 139
173 3300026118 Ga0207675_101695340 Ga0207675_1016953401 139
174 3300026121 Ga0207683_10067408 Ga0207683_100674082 139
175 3300026142 Ga0207698_11079477 Ga0207698_110794771 139
176 3300027866 Ga0209813_10295724 Ga0209813_102957241 139
177 3300027876 Ga0209974_10392776 Ga0209974_103927761 139
178 3300028380 Ga0268265_10667527 Ga0268265_106675272 139
179 3300031239 Ga0265328_10007704 Ga0265328_100077045 139
180 3300031665 Ga0316575_10086566 Ga0316575_100865662 139
181 3300031691 Ga0316579_10212112 Ga0316579_102121122 139
182 3300031728 Ga0316578_10024491 Ga0316578_100244915 139
183 3300031733 Ga0316577_10150968 Ga0316577_101509681 139
184 3300032133 Ga0316583_10022094 Ga0316583_100220942 139
185 3300032137 Ga0316585_10143554 Ga0316585_101435541 139
186 3300032139 Ga0316580_10059454 Ga0316580_100594542 139
187 3300033541 Ga0316596_1231772 Ga0316596_12317721 139
188 3300035170 Ga0373943_0580907 Ga0373943_0580907_100_519 139
189 3300035170 Ga0373943_0815084 Ga0373943_0815084_73_516 139
190 3300035398 Ga0316574_0011864 Ga0316574_0011864_1700_2119 139
191 3300035692 Ga0373935_0167920 Ga0373935_0167920_15_434 139
192 3300035725 Ga0373947_0363443 Ga0373947_0363443_48_467 139
193 3300036401 Ga0373937_0923667 Ga0373937_0923667_42_461 139
194 3300036647 Ga0316582_0023867 Ga0316582_0023867_309_728 139
195 3300036712 Ga0316584_0069025 Ga0316584_0069025_1656_2075 139
196 3300037068 Ga0373925_0487554 Ga0373925_0487554_508_927 139
197 3300037588 Ga0316581_0118095 Ga0316581_0118095_23_442 139
198 3300039437 Ga0436365_1128855 Ga0436365_1128855_483_905 139
199 3300039437 Ga0436365_1934799 Ga0436365_1934799_91_510 139
200 3300039447 Ga0436361_0341947 Ga0436361_0341947_2636_3055 139
201 3300039453 Ga0436362_0594428 Ga0436362_0594428_91_513 139
202 3300042137 Ga0450902_082762 Ga0450902_082762_42_467 139
203 3300042876 Ga0451577_0393590 Ga0451577_0393590_524_949 139
204 3300046472 Ga0495580_0563346 Ga0495580_0563346_127_546 139
205 3300046473 Ga0495582_0739774 Ga0495582_0739774_68_487 139
206 3300046491 Ga0495584_0074699 Ga0495584_0074699_1139_1558 139
207 3300046529 Ga0495652_1093060 Ga0495652_1093060_84_503 139
208 3300046533 Ga0495640_0344552 Ga0495640_0344552_176_619 139
209 3300046664 Ga0495659_0063004 Ga0495659_0063004_812_1231 139
210 3300046665 Ga0495661_0242204 Ga0495661_0242204_261_692 139
211 3300047315 Ga0495581_0166019 Ga0495581_0166019_685_1104 139
212 3300047318 Ga0495636_0169377 Ga0495636_0169377_171_590 139
213 3300047319 Ga0495674_0278501 Ga0495674_0278501_356_799 139
214 3300047471 Ga0495684_0174768 Ga0495684_0174768_340_783 139
215 3300048088 Ga0495602_0464779 Ga0495602_0464779_373_792 139
216 3300048903 Ga0496100_0008476 Ga0496100_0008476_1114_1533 139
217 3300048903 Ga0496100_0236989 Ga0496100_0236989_821_1240 139
218 3300048904 Ga0496101_0092422 Ga0496101_0092422_630_1049 139
219 3300048904 Ga0496101_0158438 Ga0496101_0158438_192_623 139
220 3300048905 Ga0496102_0667848 Ga0496102_0667848_216_635 139
221 3300048906 Ga0496103_0169388 Ga0496103_0169388_136_555 139
222 3300048907 Ga0496104_0052819 Ga0496104_0052819_1097_1516 139
223 3300048909 Ga0496106_0011842 Ga0496106_0011842_202_621 139
224 3300048910 Ga0496107_0029284 Ga0496107_0029284_2907_3326 139
225 3300048910 Ga0496107_0047895 Ga0496107_0047895_1047_1478 139
226 3300048913 Ga0496110_0474994 Ga0496110_0474994_192_623 139
227 3300048914 Ga0496111_0110898 Ga0496111_0110898_378_797 139
228 3300048914 Ga0496111_0235778 Ga0496111_0235778_23_442 139
229 3300048914 Ga0496111_0687889 Ga0496111_0687889_220_651 139
230 3300048916 Ga0496113_0043066 Ga0496113_0043066_1646_2065 139
231 3300048917 Ga0496114_0094965 Ga0496114_0094965_1069_1488 139
232 3300048918 Ga0496115_0074738 Ga0496115_0074738_2075_2494 139
233 3300048918 Ga0496115_0178608 Ga0496115_0178608_886_1305 139
234 3300049572 Ga0501036_0115308 Ga0501036_0115308_1660_2079 139
235 3300049572 Ga0501036_0162938 Ga0501036_0162938_1285_1719 139
236 3300049573 Ga0501037_0317683 Ga0501037_0317683_583_1017 139
237 3300049575 Ga0501039_0605165 Ga0501039_0605165_298_729 139
238 3300049578 Ga0501042_0124974 Ga0501042_0124974_1288_1722 139
239 3300049580 Ga0501046_0219883 Ga0501046_0219883_891_1310 139
240 3300049582 Ga0501048_0064541 Ga0501048_0064541_771_1190 139
241 3300049582 Ga0501048_0164188 Ga0501048_0164188_930_1364 139
242 3300049584 Ga0501068_0751438 Ga0501068_0751438_166_585 139
243 3300049585 Ga0501069_0416977 Ga0501069_0416977_361_780 139
244 3300049587 Ga0501071_0113698 Ga0501071_0113698_1283_1702 139
245 3300049588 Ga0501072_0074643 Ga0501072_0074643_1767_2201 139
246 3300049591 Ga0501075_0283635 Ga0501075_0283635_304_723 139
247 3300049591 Ga0501075_0654784 Ga0501075_0654784_142_639 139
248 3300049592 Ga0501076_0071475 Ga0501076_0071475_1346_1780 139
249 3300049592 Ga0501076_0168442 Ga0501076_0168442_144_563 139
250 3300049593 Ga0501077_0008172 Ga0501077_0008172_3109_3543 139
251 3300049593 Ga0501077_0139384 Ga0501077_0139384_13_432 139
252 3300049593 Ga0501077_0194936 Ga0501077_0194936_170_667 139
253 3300049741 Ga0501079_0067555 Ga0501079_0067555_1392_1811 139
254 3300049741 Ga0501079_0156908 Ga0501079_0156908_729_1163 139
255 3300049742 Ga0501080_0899430 Ga0501080_0899430_204_623 139
256 3300049742 Ga0501080_1018230 Ga0501080_1018230_177_602 139
257 3300049743 Ga0501081_0077065 Ga0501081_0077065_1695_2129 139
258 3300049822 Ga0501035_0770029 Ga0501035_0770029_114_548 139
259 3300050492 nmdc:mga0yw44_1154603_c1 nmdc:mga0yw44_1154603_c1_90_509 139
260 3300050493 nmdc:mga0k408_460347_c1 nmdc:mga0k408_460347_c1_104_553 139
261 3300050495 nmdc:mga04h51_500841_c1 nmdc:mga04h51_500841_c1_46_495 139
262 3300050496 nmdc:mga07m45_12452_c1 nmdc:mga07m45_12452_c1_1747_2196 139
263 3300053118 Ga0500594_0009577 Ga0500594_0009577_1735_2160 139
264 3300053136 Ga0500559_0000095 Ga0500559_0000095_30338_30763 139
265 3300054114 Ga0501084_0050328 Ga0501084_0050328_2865_3299 139
266 3300054114 Ga0501084_0554826 Ga0501084_0554826_527_961 139
267 3300061734 Ga0530510_0377895 Ga0530510_0377895_615_1049 139

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17723

RHH_8

Ribbon-Helix-Helix transcriptional regulator family

18

131

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
7b22-assembly1.cif.gz_B vibrio cholerae pard2 antitoxin 0.7905 16 60
7ycw-assembly1.cif.gz_D crystal form 1 of truncated antitoxin pard (2-54,containg rhh domain) from pseudoalteromonas rubra 0.7831 15 57
7ycu-assembly1.cif.gz_D heterotetramer of antitoxin prpa together with toxin prpt from pseudoalteromonas rubra 0.7257 16 69
7b22-assembly1.cif.gz_B vibrio cholerae pard2 antitoxin 0.7247 16 60
6x0a-assembly17.cif.gz_q x-ray structure of a chimeric parde toxin-antitoxin complex from mesorhizobium opportunistum 0.6981 16 69
ID Description Score Start End Superfamily
2hzvG01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant;Met repressor-like 0.7513 16 59 1.10.1220.10
2hzvG01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant;Met repressor-like 0.7138 16 59 1.10.1220.10
3no7A00 Special;Helix non-globular;Arc Repressor Mutant; 0.668 16 63 6.10.180.30
3no7A00 Special;Helix non-globular;Arc Repressor Mutant; 0.5521 16 63 6.10.180.30
af_D3ZCT3_472_685_3.80.10.10 Alpha Beta;Alpha-Beta Horseshoe;Leucine-rich repeat, LRR (right-handed beta-alpha superhelix);Ribonuclease Inhibitor 0.5073 69 139 3.80.10.10
ID Description Score Start End GO Terms
AF-A0A536X0N4-F1-model_v4 CopG family transcriptional regulator 0.9979 89 139
AF-A0A7W0WJX0-F1-model_v4 CopG family transcriptional regulator 0.9955 73 139
AF-A0A1G7KUJ2-F1-model_v4 Uncharacterized protein 0.9915 70 139
AF-A0A536X0N4-F1-model_v4 CopG family transcriptional regulator 0.9788 89 139
AF-X0VY94-F1-model_v4 Uncharacterized protein 0.9755 81 139

Feature Viewer

pLDDT pTM Quality
86.5 0.62 Medium
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Predicted Structure (AlphaFold2)

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