F372996

General Info

Members Datasets Scaffolds Average Seq Length
264 209 158 770

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2968083720|2968085790
Length 860
Sequence PPQLLAASQPTNVTEANSLGKTGRGCDPRARRPATANNVHGRGVSVAAAARRSCRSASAFLVPTPQPSGYGMTISQQIPVATLGMPRIGRRRELKFALESYWSGKSSAADLLATAKALRAASWREQHDRGVSKIPSNDFSLYDHVLDTAAMVGAVPSRYAWKGGEVPLDIYFAMARGQQGETAGCGHAGHEHAPQGHRLTAMEMTKWFDTNYHYMVPELTEDQTFALLSAKPVDYFLEAKALGIHTRPVILGPVTFLKLAKSPAEGFNPISLLPRLLPIYEQLLRRLNLSGADWVQIDEPALMLDLNPNERAAFEFTYGQLSKAAPDLKIMLATYFGPLGDNLETAISLPLAGLHLDLVRAPEQLETVGRLAPKDLVLSLGLIDGRNVWRANLPAILDCIKPIVAGWPLDRVEIAPSCPMLHVPIDLRMETALDVDVSSWLAFAAQKTEELVVLAQALSEGREAAAGALKASAEAAAACAMSTKVHDPLVEGRITSIDDGMKQRKSAFSARSRVQAGSLGLPPFPTTTIGSFPQTPQVRKARSAHAKGELSYVDYETFLKKETEAAIRWQEEIGLDVLVHGEFERNDMVQHFGEQLSGLAFTQHGWVQSYGSRYVRPPIIFGDVSRPNPMTVRWWQFAQSLTEKPVKGMLTGPVTILNWSFVRDDVPRSESCRQIALAIRDEVADLESAGARMIQIDEAAFREGLPLRKSNWKVYLDWAVECFRLASTGVKDATQIHTHMCYSEFNEIIDAIAEMDADVISIETSRSKMELLDAFMSSKYPNEIGPGVYDIHSPRVPDVGEISDLVMLARERLSDGQLWVNPDCGLKTRKWEEVRPALMNMVAAACALRENVQARGFPGS

Samples

Sample ID Description Type Environment
1 2510461076 Rhizobium leguminosarum bv. trifolii TA1 Isolate Nodule
2 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
3 2511231027 Phyllobacterium sp. YR531 Isolate Rhizosphere
4 2512875016 Mesorhizobium japonicum R7A Isolate Nodule
5 2512875024 Mesorhizobium loti R88b Isolate Nodule
6 2513237092 Bradyrhizobium sp. WSM1743 Isolate Nodule
7 2513237161 Bradyrhizobium sp. WSM2793 Isolate Nodule
8 2513237164 Mesorhizobium loti CJ3sym Isolate Nodule
9 2513237305 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
10 2515154116 Rhizobium ruizarguesonis Ps8 Isolate Nodule
11 2516143018 Ensifer sp. BR816 Isolate Nodule
12 2582581298 Rhizobium alamii YR540 Isolate Rhizosphere
13 2585427529 Rhizobium alamii YR584 Isolate Rhizosphere
14 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
15 2617270735 Bradyrhizobium shewense ERR11 Isolate Nodule
16 2687453392 Mesorhizobium ciceri biserrulae WSM1284 Isolate Unclassified
17 2693429783 Mesorhizobium sp. LCM 4577 Isolate Rhizosphere
18 2693429784 Mesorhizobium sp. LCM 4576 Isolate Rhizosphere
19 2721755686 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
20 2724679232 Rhizobium leguminosarum Vaf12 Isolate Unclassified
21 2756170246 Mesorhizobium loti DSM 2626 Isolate Nodule
22 2758568016 [Ochrobactrum] quorumnocens A44 Isolate Rhizosphere
23 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
24 2791355259 Rhizobium hidalgonense FH14 Isolate Nodule
25 2802429603 Bradyrhizobium ottawaense L2 Isolate Nodule
26 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
27 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
28 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
29 2824617872 Bradyrhizobium sp. HAMBI 2133 Isolate Unclassified
30 2824626560 Bradyrhizobium sp. HAMBI 2149 Isolate Unclassified
31 2824635225 Bradyrhizobium sp. HAMBI 2136 Isolate Unclassified
32 2824644064 Bradyrhizobium sp. HAMBI 2137 Isolate Unclassified
33 2824704595 Bradyrhizobium sp. HAMBI 2150 Isolate Unclassified
34 2824714736 Bradyrhizobium sp. HAMBI 2151 Isolate Unclassified
35 2824723954 Bradyrhizobium sp. HAMBI 2152 Isolate Unclassified
36 2824753945 Bradyrhizobium sp. HAMBI 2128 Isolate Unclassified
37 2824763712 Bradyrhizobium sp. HAMBI 2129 Isolate Unclassified
38 2824773399 Bradyrhizobium sp. HAMBI 2130 Isolate Unclassified
39 2838122688 Bradyrhizobium sp. CIR3A Isolate Nodule
40 2838675328 Agrobacterium radiobacter SEMIA 410 Isolate Nodule
41 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
42 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
43 2838724970 Agrobacterium radiobacter SEMIA 437 Isolate Nodule
44 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
45 2841859092 Agrobacterium radiobacter SEMIA 4026 Isolate Nodule
46 2841949485 Bradyrhizobium sp. ERR14 Isolate Nodule
47 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
48 2841966195 Bradyrhizobium sp. CIR18 Isolate Nodule
49 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
50 2841983080 Bradyrhizobium sp. IAR9 Isolate Nodule
51 2842110456 Rhizobium esperanzae SEMIA 414 Isolate Nodule
52 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
53 2842130223 Agrobacterium radiobacter SEMIA 441 Isolate Nodule
54 2842152218 Agrobacterium radiobacter SEMIA 457 Isolate Nodule
55 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
56 2842175837 Agrobacterium radiobacter SEMIA 462 Isolate Nodule
57 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
58 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
59 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
60 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
61 2842515876 Agrobacterium radiobacter SEMIA 4072 Isolate Nodule
62 2842871566 Phyllobacterium sp. R-73111 Isolate Unclassified
63 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
64 2847930680 Bradyrhizobium zhanjiangense CCBAU 51778 Isolate Unclassified
65 2848297114 Croceibacterium ferulae EGI 63111 Isolate Unclassified
66 2869162929 Mesorhizobium sanjuanii BSA136 Isolate Nodule
67 2874612657 Bradyrhizobium forestalis INPA54B Isolate Nodule
68 2876363079 Mesorhizobium loti R7ANS::ICEMlSym2042 Isolate Nodule
69 2876369609 Mesorhizobium sp. USDA-HM6 Isolate Unclassified
70 2879083081 Bradyrhizobium zhanjiangense CCBAU 51787 Isolate Unclassified
71 2881161766 Mesorhizobium sp. M1D.F.Ca.ET.043.01.1.1 Isolate Nodule
72 2881665667 Bradyrhizobium vignae LMG 28791 Isolate Unclassified
73 2888343758 Mesorhizobium sp. AA22 Isolate Unclassified
74 2888350351 Mesorhizobium sp. M2A.F.Ca.ET.046.03.2.1 Isolate Nodule
75 2888378607 Bradyrhizobium sp. LCT2 Isolate Unclassified
76 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
77 2899792073 Agrobacterium deltaense CNPSo 3391 Isolate Nodule
78 2903448605 Mesorhizobium japonicum Opo-235 Isolate Nodule
79 2903521522 Mesorhizobium loti R7ANS::ICEMlSym2014 Isolate Nodule
80 2903528002 Mesorhizobium loti R7ANS::ICEMlSym2037 Isolate Nodule
81 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
82 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
83 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
84 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
85 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
86 2933006813 Rhizobium sp. SEMIA 439 Isolate Unclassified
87 2933011516 Rhizobium sp. SEMIA 4032 Isolate Unclassified
88 2933586486 Rhizobium leguminosarum SEMIA 4039 Isolate Nodule
89 2958064165 Mesorhizobium sp. SARCC-RB16n Isolate Unclassified
90 2963644680 Mesorhizobium japonicum R7A Isolate Nodule
91 2965062239 Mesorhizobium sp. M1A.F.Ca.ET.072.01.1.1 Isolate Nodule
92 2968083720 Mesorhizobium erdmanii Opo-242 Isolate Unclassified
93 2968117919 Mesorhizobium atlanticum CNPSo 3140 Isolate Unclassified
94 2968128360 Mesorhizobium sp. WSM3873 Isolate Unclassified
95 2977864932 Mesorhizobium tamadayense DSM 28320 Isolate Nodule
96 2977986579 Mesorhizobium intechi BD68 Isolate Unclassified
97 2979742915 Mesorhizobium sp. M2A.F.Ca.ET.046.02.1.1 Isolate Nodule
98 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
99 2995392953 Martelella limonii NBRC 109441 Isolate Unclassified
100 3005483717 Bradyrhizobium agreste CNPSo 4010 Isolate Unclassified
101 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
102 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
103 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
104 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
105 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
106 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
107 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
108 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
109 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
110 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
111 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
112 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
113 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
114 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
115 3300009766 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico white nodule Metagenome Nodule
116 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
117 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
118 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
119 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
120 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
121 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
122 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
123 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
124 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
125 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
126 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
127 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
128 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
129 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
131 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
132 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
133 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
134 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
135 3300033442 Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 Metagenome Nodule
136 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
137 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
138 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
139 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
140 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
141 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
142 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
143 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
144 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
145 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
146 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
147 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
148 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
149 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
150 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
151 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
152 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
153 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
154 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
155 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
156 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
157 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
158 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
159 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
160 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
161 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
162 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
163 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
164 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
165 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
166 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
167 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
168 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
169 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
170 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
171 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
172 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
173 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
174 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
178 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
181 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
182 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
183 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
184 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
185 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
186 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
187 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
188 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
189 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
190 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
191 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
192 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
193 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
194 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
195 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
196 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
197 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
198 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
199 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
200 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
201 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
202 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
203 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
204 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
205 637000159 Mesorhizobium japonicum MAFF 303099 Isolate Unclassified
206 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified
207 8002285264 Aminobacter anthyllidis LMG 26462 Isolate Nodule
208 8002811521 Leucobacter chinensis NC76-1 Isolate Rhizosphere
209 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 59.85
Metatranscriptomes 0
Isolates 40.15

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.58
Nodule 23.86
Rhizoplane 1.14
Rhizosphere 40.91
Stem 0
Stem Tuber 0
Unclassified 26.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25158J39367_1000156 3300002739 Bacteria 16077
2 JGI25153J46596_10003737 3300003215 Bacteria 8404
3 JGI25160J50197_1015435 3300003354 Bacteria 2506
4 JGI25161J50226_1000129 3300003374 Bacteria 53598
5 JGI25404J52841_10000818 3300003659 Bacteria 4962
6 Ga0055526_1008129 3300003771 Bacteria 5288
7 Ga0055543_1000029 3300004625 Bacteria 131452
8 Ga0065165_1014433 3300005262 Bacteria 3067
9 Ga0068863_100079508 3300005841 Bacteria 3105
10 Ga0081455_10002181 3300005937 Bacteria 23343
11 Ga0081455_10004630 3300005937 Bacteria 15337
12 Ga0081455_10006187 3300005937 Bacteria 12908
13 Ga0081540_1003266 3300005983 Bacteria 12888
14 Ga0081540_1010926 3300005983 Bacteria 6098
15 Ga0099826_10013773 3300006948 Bacteria 6113
16 Ga0105237_10069119 3300009545 Bacteria 3527
17 Ga0123341_1000053 3300009765 Bacteria 49025
18 Ga0123342_1013751 3300009766 Bacteria 7994
19 Ga0157374_10002337 3300013296 Bacteria 16020
20 Ga0157374_10023405 3300013296 Bacteria 5526
21 Ga0157375_10018237 3300013308 Bacteria 6361
22 Ga0182005_1000023 3300015265 Bacteria 246328
23 Ga0214544_1000570 3300021320 Bacteria 69224
24 Ga0214542_1001638 3300021321 Bacteria 46052
25 Ga0214543_1002176 3300021327 Bacteria 38580
26 Ga0209436_100026 3300025208 Bacteria 90859
27 Ga0209129_1000641 3300025258 Bacteria 23426
28 Ga0209673_1008646 3300025273 Bacteria 4510
29 Ga0209130_1000030 3300025284 Bacteria 323323
30 Ga0209564_1000207 3300025295 Bacteria 135313
31 Ga0209758_1000586 3300025297 Bacteria 56819
32 Ga0209758_1000906 3300025297 Bacteria 40219
33 Ga0209758_1001057 3300025297 Bacteria 35976
34 Ga0207426_1000047 3300025302 Bacteria 417011
35 Ga0207699_10002202 3300025906 Bacteria 9193
36 Ga0209389_1000101 3300027296 Bacteria 78525
37 Ga0209371_1000755 3300027312 Bacteria 26966
38 Ga0209282_1018283 3300027666 Bacteria 4449
39 Ga0307515_10004490 3300028794 Bacteria 28866
40 Ga0307513_10009932 3300031456 Bacteria 12005
41 Ga0315911_1000030 3300033442 Bacteria 76458
42 Ga0395899_0000030 3300037312 Bacteria 329063
43 Ga0395900_0000023 3300037418 Bacteria 336048
44 Ga0395898_0000038 3300037466 Bacteria 329063
45 Ga0395905_0000021 3300037471 Bacteria 329054
46 Ga0395901_0000018 3300038443 Bacteria 336048
47 Ga0451833_0100452 3300041491 Bacteria 3318
48 Ga0451835_0360881 3300041492 Bacteria 3629
49 Ga0451837_0573784 3300041494 Bacteria 3135
50 Ga0451839_0421572 3300041496 Bacteria 3895
51 Ga0451841_1357865 3300041498 Bacteria 3805
52 Ga0451845_0441256 3300041501 Bacteria 5086
53 Ga0451847_0720047 3300041503 Bacteria 3363
54 Ga0451849_0447435 3300041505 Bacteria 3184
55 Ga0451851_0867992 3300041507 Bacteria 3360
56 Ga0451843_0055338 3300041509 Bacteria 4100
57 Ga0451855_0377218 3300041511 Bacteria 3284
58 Ga0451853_0472897 3300041512 Bacteria 4071
59 Ga0495638_0000632 3300046460 Bacteria 38873
60 Ga0495650_0000029 3300046471 Bacteria 453466
61 Ga0495606_0033141 3300046507 Bacteria 3567
62 Ga0495616_0031542 3300046513 Bacteria 2774
63 Ga0495643_0018541 3300046522 Bacteria 4042
64 Ga0495633_0000058 3300046558 Bacteria 147584
65 Ga0495633_0006906 3300046558 Bacteria 6643
66 Ga0495668_0000002 3300046616 Bacteria 763179
67 Ga0495658_0017706 3300046683 Bacteria 3688
68 Ga0495660_0001144 3300046810 Bacteria 18852
69 Ga0495681_0015744 3300047470 Bacteria 4270
70 Ga0496106_0000244 3300048909 Bacteria 37887
71 Ga0496111_0096907 3300048914 Bacteria 2165
72 Ga0496116_0019984 3300048919 Bacteria 5103
73 Ga0496117_0021646 3300048920 Bacteria 5192
74 Ga0496118_0036381 3300048921 Bacteria 3981
75 Ga0496121_0000001 3300048924 Bacteria 1830318
76 Ga0496121_0000343 3300048924 Bacteria 96972
77 Ga0496121_0019861 3300048924 Bacteria 6691
78 Ga0496122_0000133 3300048925 Bacteria 171945
79 Ga0496122_0024351 3300048925 Bacteria 5298
80 Ga0496122_0044415 3300048925 Bacteria 3468
81 Ga0496123_0001580 3300048926 Bacteria 31071
82 Ga0496123_0039880 3300048926 Bacteria 3279
83 Ga0496124_0005842 3300048927 Bacteria 13657
84 Ga0496124_0051254 3300048927 Bacteria 3512
85 Ga0496125_0026097 3300048928 Bacteria 5335
86 Ga0496126_0003528 3300048929 Bacteria 19681
87 Ga0496126_0008025 3300048929 Bacteria 11455
88 Ga0496126_0015903 3300048929 Bacteria 7554
89 Ga0496126_0031002 3300048929 Bacteria 5057
90 Ga0501032_0000623 3300049569 Bacteria 28778
91 Ga0501032_0010100 3300049569 Bacteria 6814
92 Ga0501032_0022229 3300049569 Bacteria 4399
93 Ga0501033_0001918 3300049570 Bacteria 18103
94 Ga0501033_0004320 3300049570 Bacteria 11408
95 Ga0501034_0005689 3300049571 Bacteria 13550
96 Ga0501034_0040147 3300049571 Bacteria 4738
97 Ga0501036_0000641 3300049572 Bacteria 25541
98 Ga0501036_0007636 3300049572 Bacteria 8827
99 Ga0501036_0015463 3300049572 Bacteria 6374
100 Ga0501037_0012715 3300049573 Bacteria 6200
101 Ga0501038_0001348 3300049574 Bacteria 22355
102 Ga0501038_0004934 3300049574 Bacteria 12388
103 Ga0501038_0015753 3300049574 Bacteria 6870
104 Ga0501038_0077465 3300049574 Bacteria 2807
105 Ga0501039_0001023 3300049575 Bacteria 20395
106 Ga0501039_0001416 3300049575 Bacteria 17647
107 Ga0501042_0014581 3300049578 Bacteria 5367
108 Ga0501043_0005606 3300049579 Bacteria 10107
109 Ga0501043_0091114 3300049579 Bacteria 2397
110 Ga0501046_0004167 3300049580 Bacteria 13167
111 Ga0501046_0005767 3300049580 Bacteria 11055
112 Ga0501046_0006744 3300049580 Bacteria 10139
113 Ga0501047_0011182 3300049581 Bacteria 8493
114 Ga0501047_0021180 3300049581 Bacteria 6243
115 Ga0501048_0005098 3300049582 Bacteria 10009
116 Ga0501048_0031537 3300049582 Bacteria 3833
117 Ga0501067_0000960 3300049583 Bacteria 15436
118 Ga0501068_0000526 3300049584 Bacteria 19398
119 Ga0501068_0002752 3300049584 Bacteria 9339
120 Ga0501068_0070419 3300049584 Bacteria 2133
121 Ga0501069_0010662 3300049585 Bacteria 4871
122 Ga0501070_0000893 3300049586 Bacteria 27148
123 Ga0501070_0007060 3300049586 Bacteria 9555
124 Ga0501070_0008169 3300049586 Bacteria 8853
125 Ga0501070_0020361 3300049586 Bacteria 5565
126 Ga0501072_0000479 3300049588 Bacteria 28715
127 Ga0501072_0005584 3300049588 Bacteria 9571
128 Ga0501073_0000613 3300049589 Bacteria 25120
129 Ga0501074_0002022 3300049590 Bacteria 13984
130 Ga0501074_0004446 3300049590 Bacteria 10031
131 Ga0501074_0004589 3300049590 Bacteria 9891
132 Ga0501074_0007353 3300049590 Bacteria 7963
133 Ga0501077_0001787 3300049593 Bacteria 12998
134 Ga0501079_0001123 3300049741 Bacteria 18644
135 Ga0501080_0001397 3300049742 Bacteria 20213
136 Ga0501080_0001694 3300049742 Bacteria 18799
137 Ga0501080_0015100 3300049742 Bacteria 7117
138 Ga0501083_0005970 3300049744 Bacteria 8621
139 Ga0501083_0055479 3300049744 Bacteria 2656
140 Ga0501083_0060776 3300049744 Bacteria 2524
141 Ga0501035_0000589 3300049822 Bacteria 40009
142 Ga0501035_0003629 3300049822 Bacteria 14721
143 Ga0501035_0004234 3300049822 Bacteria 13628
144 Ga0501035_0015086 3300049822 Bacteria 7129
145 Ga0501044_0000149 3300049823 Bacteria 86306
146 Ga0501044_0003106 3300049823 Bacteria 18810
147 Ga0501044_0008419 3300049823 Bacteria 11310
148 Ga0501044_0048614 3300049823 Bacteria 4380
149 Ga0501044_0172594 3300049823 Bacteria 2132
150 Ga0501045_0015701 3300049824 Bacteria 5372
151 Ga0500568_0000440 3300053139 Bacteria 31182
152 Ga0500568_0002063 3300053139 Bacteria 12179
153 Ga0500622_0000951 3300053156 Bacteria 24641
154 Ga0500633_0000617 3300053160 Bacteria 5879
155 Ga0501084_0001465 3300054114 Bacteria 18734
156 Ga0501084_0067555 3300054114 Bacteria 2992
157 Ga0501082_0012213 3300060353 Bacteria 7379
158 Ga0501082_0015978 3300060353 Bacteria 6456

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049579 Ga0501043_0091114 Ga0501043_0091114_23_1930 610
2 3300048925 Ga0496122_0044415 Ga0496122_0044415_1540_3453 624
3 3300049584 Ga0501068_0070419 Ga0501068_0070419_29_2074 654
4 3300049823 Ga0501044_0172594 Ga0501044_0172594_47_2116 657
5 3300048914 Ga0496111_0096907 Ga0496111_0096907_13_2100 681
6 3300048920 Ga0496117_0021646 Ga0496117_0021646_2679_4778 688
7 iso_pu_bacteria 2513237305 2514416663 702
8 3300046513 Ga0495616_0031542 Ga0495616_0031542_294_2591 708
9 3300047470 Ga0495681_0015744 Ga0495681_0015744_921_3212 708
10 3300049582 Ga0501048_0031537 Ga0501048_0031537_1619_3820 718
11 3300049588 Ga0501072_0005584 Ga0501072_0005584_4372_6687 718
12 3300046683 Ga0495658_0017706 Ga0495658_0017706_714_3059 726
13 3300046460 Ga0495638_0000632 Ga0495638_0000632_8170_10524 731
14 3300053139 Ga0500568_0000440 Ga0500568_0000440_27202_29556 731
15 3300049823 Ga0501044_0048614 Ga0501044_0048614_1853_4189 734
16 iso_pu_bacteria 2510461076 2510896405 738
17 3300028794 Ga0307515_10004490 Ga0307515_1000449017 740
18 iso_pu_bacteria 2876369609 2876373206 741
19 3300013296 Ga0157374_10023405 Ga0157374_100234054 744
20 3300013308 Ga0157375_10018237 Ga0157375_100182373 744
21 iso_pu_bacteria 8002811521 8002814129 744
22 3300025906 Ga0207699_10002202 Ga0207699_100022024 746
23 3300031456 Ga0307513_10009932 Ga0307513_100099324 746
24 3300049574 Ga0501038_0077465 Ga0501038_0077465_347_2692 746
25 3300049823 Ga0501044_0000149 Ga0501044_0000149_82345_84690 746
26 3300054114 Ga0501084_0067555 Ga0501084_0067555_131_2470 746
27 3300009765 Ga0123341_1000053 Ga0123341_100005337 747
28 3300009766 Ga0123342_1013751 Ga0123342_10137512 747
29 3300048924 Ga0496121_0000001 Ga0496121_0000001_1159131_1161485 747
30 3300049569 Ga0501032_0022229 Ga0501032_0022229_1295_3700 748
31 iso_pu_bacteria 2987605356 2987606730 748
32 3300005841 Ga0068863_100079508 Ga0068863_1000795081 749
33 3300048927 Ga0496124_0051254 Ga0496124_0051254_844_3198 749
34 3300048929 Ga0496126_0031002 Ga0496126_0031002_315_2669 749
35 iso_pu_bacteria 2821136567 2821140069 749
36 iso_pu_bacteria 2904467357 2904472190 749
37 3300003659 JGI25404J52841_10000818 JGI25404J52841_100008182 750
38 3300005937 Ga0081455_10006187 Ga0081455_100061877 750
39 3300005983 Ga0081540_1003266 Ga0081540_10032664 750
40 iso_pu_bacteria 2818991442 2819572538 750
41 3300013296 Ga0157374_10002337 Ga0157374_100023373 751
42 3300048925 Ga0496122_0000133 Ga0496122_0000133_161708_163993 751
43 3300048926 Ga0496123_0001580 Ga0496123_0001580_7906_10191 751
44 iso_pu_bacteria 2802429603 2805922600 751
45 iso_pu_bacteria 2881161766 2881163917 751
46 3300009545 Ga0105237_10069119 Ga0105237_100691192 752
47 3300046471 Ga0495650_0000029 Ga0495650_0000029_103577_105856 752
48 3300048924 Ga0496121_0000343 Ga0496121_0000343_54733_57033 752
49 3300049569 Ga0501032_0010100 Ga0501032_0010100_4372_6711 752
50 3300049572 Ga0501036_0015463 Ga0501036_0015463_131_2470 752
51 3300049574 Ga0501038_0015753 Ga0501038_0015753_365_2704 752
52 3300049580 Ga0501046_0006744 Ga0501046_0006744_3706_6045 752
53 3300049585 Ga0501069_0010662 Ga0501069_0010662_129_2468 752
54 3300049586 Ga0501070_0020361 Ga0501070_0020361_132_2471 752
55 3300049590 Ga0501074_0004589 Ga0501074_0004589_5583_7922 752
56 3300049742 Ga0501080_0015100 Ga0501080_0015100_2809_5148 752
57 3300049744 Ga0501083_0060776 Ga0501083_0060776_43_2382 752
58 3300053156 Ga0500622_0000951 Ga0500622_0000951_18838_21162 752
59 3300060353 Ga0501082_0015978 Ga0501082_0015978_823_3162 752
60 iso_pu_bacteria 2995392953 2995395422 752
61 3300005262 Ga0065165_1014433 Ga0065165_10144332 753
62 3300006948 Ga0099826_10013773 Ga0099826_100137735 753
63 3300027666 Ga0209282_1018283 Ga0209282_10182833 753
64 3300015265 Ga0182005_1000023 Ga0182005_100002327 754
65 3300046558 Ga0495633_0000058 Ga0495633_0000058_48481_50787 754
66 3300046810 Ga0495660_0001144 Ga0495660_0001144_15514_17811 754
67 3300048921 Ga0496118_0036381 Ga0496118_0036381_1445_3769 755
68 3300048928 Ga0496125_0026097 Ga0496125_0026097_175_2499 755
69 3300049586 Ga0501070_0007060 Ga0501070_0007060_4999_7374 755
70 3300049822 Ga0501035_0003629 Ga0501035_0003629_11412_13787 755
71 3300027312 Ga0209371_1000755 Ga0209371_100075510 756
72 iso_pu_bacteria 637000159 637078145 756
73 3300048929 Ga0496126_0015903 Ga0496126_0015903_1198_3525 757
74 3300025297 Ga0209758_1000906 Ga0209758_100090625 758
75 3300049569 Ga0501032_0000623 Ga0501032_0000623_6052_8358 758
76 3300049570 Ga0501033_0004320 Ga0501033_0004320_5013_7319 758
77 3300049571 Ga0501034_0005689 Ga0501034_0005689_5306_7612 758
78 3300049572 Ga0501036_0000641 Ga0501036_0000641_8289_10595 758
79 3300049574 Ga0501038_0004934 Ga0501038_0004934_8453_10759 758
80 3300049575 Ga0501039_0001023 Ga0501039_0001023_16801_19107 758
81 3300049579 Ga0501043_0005606 Ga0501043_0005606_3962_6268 758
82 3300049580 Ga0501046_0005767 Ga0501046_0005767_733_3039 758
83 3300049581 Ga0501047_0011182 Ga0501047_0011182_4128_6434 758
84 3300049583 Ga0501067_0000960 Ga0501067_0000960_5141_7447 758
85 3300049584 Ga0501068_0000526 Ga0501068_0000526_4361_6667 758
86 3300049588 Ga0501072_0000479 Ga0501072_0000479_24304_26610 758
87 3300049589 Ga0501073_0000613 Ga0501073_0000613_12638_14944 758
88 3300049590 Ga0501074_0002022 Ga0501074_0002022_9949_12255 758
89 3300049593 Ga0501077_0001787 Ga0501077_0001787_8426_10732 758
90 3300049741 Ga0501079_0001123 Ga0501079_0001123_4090_6396 758
91 3300049742 Ga0501080_0001397 Ga0501080_0001397_13946_16252 758
92 3300049744 Ga0501083_0005970 Ga0501083_0005970_2060_4366 758
93 3300049822 Ga0501035_0015086 Ga0501035_0015086_734_3040 758
94 3300049823 Ga0501044_0003106 Ga0501044_0003106_4128_6434 758
95 3300054114 Ga0501084_0001465 Ga0501084_0001465_14369_16675 758
96 3300060353 Ga0501082_0012213 Ga0501082_0012213_1112_3418 758
97 iso_pu_bacteria 2848297114 2848298402 758
98 3300005983 Ga0081540_1010926 Ga0081540_10109264 759
99 3300041491 Ga0451833_0100452 Ga0451833_0100452_542_2866 759
100 3300041492 Ga0451835_0360881 Ga0451835_0360881_542_2866 759
101 3300041494 Ga0451837_0573784 Ga0451837_0573784_251_2575 759
102 3300041496 Ga0451839_0421572 Ga0451839_0421572_272_2596 759
103 3300041498 Ga0451841_1357865 Ga0451841_1357865_324_2648 759
104 3300041501 Ga0451845_0441256 Ga0451845_0441256_2221_4545 759
105 3300041503 Ga0451847_0720047 Ga0451847_0720047_797_3121 759
106 3300041505 Ga0451849_0447435 Ga0451849_0447435_243_2567 759
107 3300041507 Ga0451851_0867992 Ga0451851_0867992_243_2567 759
108 3300041509 Ga0451843_0055338 Ga0451843_0055338_953_3277 759
109 3300041511 Ga0451855_0377218 Ga0451855_0377218_343_2667 759
110 3300041512 Ga0451853_0472897 Ga0451853_0472897_1505_3829 759
111 3300046558 Ga0495633_0006906 Ga0495633_0006906_777_3101 759
112 3300049581 Ga0501047_0021180 Ga0501047_0021180_1177_3522 759
113 iso_pu_bacteria 2898329390 2898331976 759
114 iso_pu_bacteria 2958064165 2958068979 759
115 3300046522 Ga0495643_0018541 Ga0495643_0018541_449_2773 760
116 3300046616 Ga0495668_0000002 Ga0495668_0000002_66671_69001 760
117 3300048919 Ga0496116_0019984 Ga0496116_0019984_1091_3415 760
118 3300048924 Ga0496121_0019861 Ga0496121_0019861_1642_3966 760
119 3300048927 Ga0496124_0005842 Ga0496124_0005842_8623_10962 760
120 3300048929 Ga0496126_0003528 Ga0496126_0003528_14266_16605 760
121 iso_pu_bacteria 2516143018 2516210045 760
122 iso_pu_bacteria 2516143018 2516210271 760
123 iso_pu_bacteria 2821443989 2821450722 760
124 3300037312 Ga0395899_0000030 Ga0395899_0000030_79492_81819 761
125 3300037418 Ga0395900_0000023 Ga0395900_0000023_85898_88225 761
126 3300037466 Ga0395898_0000038 Ga0395898_0000038_79492_81819 761
127 3300037471 Ga0395905_0000021 Ga0395905_0000021_79492_81819 761
128 3300038443 Ga0395901_0000018 Ga0395901_0000018_85898_88225 761
129 iso_pu_bacteria 2721755686 2723571859 761
130 iso_pu_bacteria 2791355259 2793318354 761
131 iso_pu_bacteria 2842110456 2842117781 761
132 iso_pu_bacteria 2599185210 2599604531 762
133 iso_pu_bacteria 2693429784 2694636716 762
134 iso_pu_bacteria 2838675328 2838678129 762
135 iso_pu_bacteria 2838714209 2838716964 762
136 iso_pu_bacteria 2838719591 2838722425 762
137 iso_pu_bacteria 2838724970 2838727714 762
138 iso_pu_bacteria 2841846520 2841849370 762
139 iso_pu_bacteria 2841859092 2841861582 762
140 iso_pu_bacteria 2842124991 2842127881 762
141 iso_pu_bacteria 2842130223 2842133022 762
142 iso_pu_bacteria 2842152218 2842155016 762
143 iso_pu_bacteria 2842170452 2842173515 762
144 iso_pu_bacteria 2842175837 2842178637 762
145 iso_pu_bacteria 2842187318 2842190072 762
146 iso_pu_bacteria 2842211629 2842214386 762
147 iso_pu_bacteria 2842224351 2842227105 762
148 iso_pu_bacteria 2842515876 2842518152 762
149 iso_pu_bacteria 2842871566 2842875407 762
150 iso_pu_bacteria 2899792073 2899792699 762
151 iso_pu_bacteria 2919114240 2919117221 762
152 iso_pu_bacteria 2926754445 2926758669 762
153 iso_pu_bacteria 2933006813 2933009603 762
154 iso_pu_bacteria 2933011516 2933013780 762
155 iso_pu_bacteria 2965062239 2965064936 762
156 iso_pu_bacteria 2968117919 2968123994 762
157 iso_pu_bacteria 8056681323 8056681751 762
158 3300005937 Ga0081455_10002181 Ga0081455_100021814 763
159 3300005937 Ga0081455_10004630 Ga0081455_1000463015 763
160 3300048929 Ga0496126_0008025 Ga0496126_0008025_8297_10645 763
161 iso_pu_bacteria 2511231027 2511388483 763
162 iso_pu_bacteria 2758568016 2758639879 763
163 iso_pu_bacteria 2791355048 2792461575 763
164 iso_pu_bacteria 2843744320 2843746281 763
165 3300021320 Ga0214544_1000570 Ga0214544_100057021 764
166 3300021321 Ga0214542_1001638 Ga0214542_100163825 764
167 3300021327 Ga0214543_1002176 Ga0214543_100217622 764
168 3300049744 Ga0501083_0055479 Ga0501083_0055479_306_2627 764
169 iso_pu_bacteria 2512875016 2512934926 764
170 iso_pu_bacteria 2512875024 2512963287 764
171 iso_pu_bacteria 2513237164 2514034428 764
172 iso_pu_bacteria 2756170246 2756677674 764
173 iso_pu_bacteria 2842482326 2842484315 764
174 iso_pu_bacteria 2869162929 2869163567 764
175 iso_pu_bacteria 2876363079 2876365932 764
176 iso_pu_bacteria 2888350351 2888351631 764
177 iso_pu_bacteria 2903521522 2903526103 764
178 iso_pu_bacteria 2903528002 2903531281 764
179 iso_pu_bacteria 2963644680 2963650694 764
180 iso_pu_bacteria 2968128360 2968130941 764
181 iso_pu_bacteria 2977986579 2977989376 764
182 iso_pu_bacteria 2979742915 2979747790 764
183 iso_pu_bacteria 8002285264 8002287148 764
184 3300046507 Ga0495606_0033141 Ga0495606_0033141_408_2735 765
185 3300048925 Ga0496122_0024351 Ga0496122_0024351_1197_3551 765
186 3300048926 Ga0496123_0039880 Ga0496123_0039880_627_2981 765
187 3300049570 Ga0501033_0001918 Ga0501033_0001918_902_3250 765
188 3300049571 Ga0501034_0040147 Ga0501034_0040147_1489_3837 765
189 3300049572 Ga0501036_0007636 Ga0501036_0007636_5208_7556 765
190 3300049574 Ga0501038_0001348 Ga0501038_0001348_19106_21454 765
191 3300049575 Ga0501039_0001416 Ga0501039_0001416_12610_14958 765
192 3300049578 Ga0501042_0014581 Ga0501042_0014581_1788_4136 765
193 3300049580 Ga0501046_0004167 Ga0501046_0004167_9945_12293 765
194 3300049582 Ga0501048_0005098 Ga0501048_0005098_6242_8590 765
195 3300049584 Ga0501068_0002752 Ga0501068_0002752_940_3288 765
196 3300049586 Ga0501070_0008169 Ga0501070_0008169_5648_7996 765
197 3300049590 Ga0501074_0007353 Ga0501074_0007353_4861_7209 765
198 3300049822 Ga0501035_0004234 Ga0501035_0004234_3824_6172 765
199 3300049824 Ga0501045_0015701 Ga0501045_0015701_781_3129 765
200 iso_pu_bacteria 2510917030 2511197301 765
201 iso_pu_bacteria 2515154116 2515661735 765
202 iso_pu_bacteria 2693429783 2694631434 765
203 iso_pu_bacteria 2919100787 2919104711 765
204 iso_pu_bacteria 2933586486 2933593832 765
205 3300049573 Ga0501037_0012715 Ga0501037_0012715_788_3163 766
206 3300049586 Ga0501070_0000893 Ga0501070_0000893_24391_26766 766
207 3300049590 Ga0501074_0004446 Ga0501074_0004446_3069_5444 766
208 3300049742 Ga0501080_0001694 Ga0501080_0001694_12090_14465 766
209 3300049822 Ga0501035_0000589 Ga0501035_0000589_28268_30643 766
210 3300049823 Ga0501044_0008419 Ga0501044_0008419_3149_5524 766
211 iso_pu_bacteria 2513237092 2513622788 766
212 iso_pu_bacteria 2617270735 2617353412 766
213 iso_pu_bacteria 2687453392 2688601006 766
214 iso_pu_bacteria 2824617872 2824618302 766
215 iso_pu_bacteria 2824626560 2824626989 766
216 iso_pu_bacteria 2824635225 2824635341 766
217 iso_pu_bacteria 2824644064 2824644180 766
218 iso_pu_bacteria 2824704595 2824704781 766
219 iso_pu_bacteria 2824714736 2824714852 766
220 iso_pu_bacteria 2824723954 2824724084 766
221 iso_pu_bacteria 2824753945 2824754784 766
222 iso_pu_bacteria 2824763712 2824764535 766
223 iso_pu_bacteria 2824773399 2824779918 766
224 iso_pu_bacteria 2838122688 2838129792 766
225 iso_pu_bacteria 2841949485 2841955268 766
226 iso_pu_bacteria 2841957949 2841963805 766
227 iso_pu_bacteria 2841966195 2841974129 766
228 iso_pu_bacteria 2841974524 2841976737 766
229 iso_pu_bacteria 2841983080 2841986131 766
230 iso_pu_bacteria 2847930680 2847933475 766
231 iso_pu_bacteria 2874612657 2874613704 766
232 iso_pu_bacteria 2879083081 2879088845 766
233 iso_pu_bacteria 2881665667 2881666831 766
234 iso_pu_bacteria 2888343758 2888349626 766
235 iso_pu_bacteria 2888378607 2888386678 766
236 iso_pu_bacteria 2903448605 2903455872 766
237 iso_pu_bacteria 2904711408 2904713989 766
238 iso_pu_bacteria 2968083720 2968085790 766
239 iso_pu_bacteria 2977864932 2977870683 766
240 iso_pu_bacteria 3005483717 3005490690 766
241 iso_pu_bacteria 8001845381 8001848372 766
242 3300027296 Ga0209389_1000101 Ga0209389_100010183 767
243 3300033442 Ga0315911_1000030 Ga0315911_100003043 767
244 iso_pu_bacteria 2513237161 2514015897 767
245 3300025297 Ga0209758_1001057 Ga0209758_100105725 768
246 iso_pu_bacteria 2724679232 2725952188 768
247 3300002739 JGI25158J39367_1000156 JGI25158J39367_10001568 769
248 3300003215 JGI25153J46596_10003737 JGI25153J46596_100037371 769
249 3300003354 JGI25160J50197_1015435 JGI25160J50197_10154351 769
250 3300003374 JGI25161J50226_1000129 JGI25161J50226_100012939 769
251 3300003771 Ga0055526_1008129 Ga0055526_10081292 769
252 3300004625 Ga0055543_1000029 Ga0055543_1000029108 769
253 3300025208 Ga0209436_100026 Ga0209436_10002669 769
254 3300025258 Ga0209129_1000641 Ga0209129_10006413 769
255 3300025273 Ga0209673_1008646 Ga0209673_10086463 769
256 3300025284 Ga0209130_1000030 Ga0209130_100003018 769
257 3300025295 Ga0209564_1000207 Ga0209564_1000207111 769
258 3300025297 Ga0209758_1000586 Ga0209758_100058635 769
259 3300025302 Ga0207426_1000047 Ga0207426_1000047382 769
260 3300048909 Ga0496106_0000244 Ga0496106_0000244_26373_28778 769
261 3300053139 Ga0500568_0002063 Ga0500568_0002063_7083_9407 769
262 3300053160 Ga0500633_0000617 Ga0500633_0000617_1216_3540 769
263 iso_pu_bacteria 2582581298 2585224638 769
264 iso_pu_bacteria 2585427529 2585547194 769

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01717

Meth_synt_2

Cobalamin-independent synthase, Catalytic domain

524

847

1

PF08267

Meth_synt_1

Cobalamin-independent synthase, N-terminal domain

79

406

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
4qqu-assembly1.cif.gz_A crystal structure of the cobalamin-independent methionine synthase enzyme in a closed conformation 0.96 3 762
4qqu-assembly1.cif.gz_A crystal structure of the cobalamin-independent methionine synthase enzyme in a closed conformation 0.9513 3 762
4l65-assembly1.cif.gz_A crystal structure of the candida albicans methionine synthase in complex with 5-methyl-tetrahydrofolate and methionine 0.9145 3 762
4l5z-assembly1.cif.gz_A crystal structure of the candida albicans methionine synthase in complex with homocysteine 0.9134 3 762
3ppf-assembly1.cif.gz_A crystal structure of the candida albicans methionine synthase by surface entropy reduction, alanine variant without zinc 0.9118 3 760
ID Description Score Start End Superfamily
af_Q54X49_428_818_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9825 378 760 3.20.20.210
4l61A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9655 394 762 3.20.20.210
1xdjA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9649 397 762 3.20.20.210
4l61A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9602 394 762 3.20.20.210
af_Q54X49_428_818_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9576 378 760 3.20.20.210
ID Description Score Start End GO Terms
AF-A0A6G3XYD4-F1-model_v4 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 0.9919 543 651 GO:0003871
GO:0008270
GO:0009086
GO:0032259
AF-A0A803R3S9-F1-model_v4 merged 0.9893 500 601
AF-A0A376FIQ5-F1-model_v4 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) 0.9868 423 650 GO:0003871
GO:0008270
GO:0009086
GO:0032259
AF-A0A6M1SG24-F1-model_v4 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 0.9856 549 709 GO:0003871
GO:0008270
GO:0009086
GO:0032259
AF-A0A526PY43-F1-model_v4 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 0.985 525 657 GO:0003871
GO:0008270
GO:0009086
GO:0032259

Feature Viewer

pLDDT pTM Quality
90.28 0.9 High
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Predicted Structure (AlphaFold2)

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