F372679

General Info

Members Datasets Scaffolds Average Seq Length
264 181 236 1158

Family's Representative Sequence

Representative Sequence 3300026089|Ga0207648_10000568|Ga0207648_1000056813
Length 1204
Sequence MTNQSYKTTCCYCGVGCGIVVNKDALGRITVEGDKDHPVNKGMLCSKGMNLHHTVNDRSDRLLYPEMRYSKNQPRQRVSWDTALERTAAVFKTLISKYGPDSVAFYASGQCLTEEYYVVNKLMKGFIGSNNIDTNSRLCMSSAVAGYKMSLGEDSVPVSYDDLELADCLFVAGANPAWCHPILWRRVEAAREANPNIKIIVSDPRKTQTCSIANLHLQLNPGTDITLHHAIGRCLIEEGNIDPNFIKDHTEGFEQYKQTVFGRTLAEAAKICGVEENDIRLAASYIGNAKGFLTLWTMGLNQSVIGVNKNLSLIXLNLITGHIGKPGSGPFSLTGQPNAMGGREVGGLANLLSAHRDLANESHRNEMERFWQIPLGTIQPKAGLTATQMFEALNDGRLKAVWILCTNPLISLPDVRMAEEGLKKAKFVVVQDVTNKLETLKYADVVLPAAAWTEKEGTMTNAERSISLLSKVMDAPGEALPDATILYRFAQKMGFSGFDYKEPGEIYAEHAASTAGTHIDISDLSYDILRQKRSVQWPYTAAINGRGTPRLFADKKFYTVSQRAIIRSFPDKNESEQPDFNHPLILTTGRIRDQWHTMSKTGKVNKLKQHISESFLEIHPDDAATRGIKDNDLVEIFNPRGQVRVKAKYSDNIKKGVVFLPMHWGKVLQSDLNRANNLTNNLVDPVSKEPDFKFSAVEVRLYKKAKQKIVVIGAGAGACGFVKSYRALNTEDEIEVFSKENFPFYNRVLLPDYINGALPWNNLVKMTDEEERAYNIRLHRGLSIEKIDRESKTVTDSNGKVHSYDILLMATGSRAILLRDIPALDGIFTMRSRVDADKFRDYIDPAKGQVIIVGGGLLGIELAASLREVNVKVTIVQRISRLMDRQLDPLGSQLLHEELVDKGVDIYYNDEIERFLGEQQVTGIRLKSGLMLECQAIVIAIGTTPNIELAKAAGINCKRGVVVDEYLQTNDPSVFAIGEIAEFKGFLYGITAAAEQQAEIVARYLYGDIAKYYDGSLLMNILKLHGTDLCSLGAVECPDDPAYEEIVFIDKARRYYKKCIVHNDRLIGAILIGDKAEFLEFRDLIQGRMELSEKRLQLLRSGKKAEPVIGKMVCSCGNVGEGNIINKIKEGCKDLVQLCQLSGAGMGCGSCRPEVKGILEKTLNPKFYQPATAGTSSSAGTPEQGEHVVINLETNESTIAKAAI

Samples

Sample ID Description Type Environment
1 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
2 2738541278 Niastella sp. CF465 Isolate Unclassified
3 2738541283 Pedobacter sp. OK701 Isolate Unclassified
4 2738541302 Pedobacter sp. CF074 Isolate Unclassified
5 2739367651 Pedobacter sp. OK291 Isolate Unclassified
6 2818991437 Pedobacter terrae 518 Isolate Unclassified
7 2818991444 Filimonas endophytica 3197 Isolate Unclassified
8 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
9 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
10 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
11 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
12 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
13 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
14 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
15 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
16 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
17 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
18 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
19 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
20 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
21 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
22 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
23 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
24 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
25 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
26 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
27 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
28 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
29 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
30 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
31 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
32 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
33 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
34 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
35 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
36 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
37 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
38 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
39 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
40 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
41 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
42 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
43 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
44 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
45 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
46 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
47 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
48 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
49 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
50 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
51 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
52 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
53 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
54 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
55 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
56 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
57 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
58 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
59 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
60 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
61 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
62 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
63 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
64 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
65 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
66 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
67 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
68 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
69 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
70 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
71 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
72 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
73 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
74 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
75 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
76 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
77 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
78 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
79 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
80 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
81 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
82 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
83 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
84 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
85 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
86 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
87 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
88 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
89 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
90 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
91 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
92 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
93 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
94 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
95 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
96 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
97 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
98 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
99 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
100 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
101 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
103 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
104 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
105 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
106 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
107 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
109 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
110 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
136 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
137 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
138 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
139 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
140 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
141 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
142 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
143 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
144 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
145 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
146 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
147 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
148 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
149 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
150 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
151 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
152 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
153 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
154 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
155 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
156 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
157 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
158 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
159 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
160 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
161 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
162 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
163 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
164 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
165 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
166 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
168 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
169 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
170 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
171 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
172 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
173 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
174 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
175 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
176 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
177 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
178 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
179 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
180 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
181 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 89.39
Metatranscriptomes 0
Isolates 10.61

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.88
Nodule 0
Rhizoplane 0
Rhizosphere 71.97
Stem 0
Stem Tuber 0
Unclassified 15.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000372 3300001979 Bacteria 19284
2 JGI25162J39368_1000012 3300002737 Bacteria 373191
3 JGI25154J39366_1000014 3300002738 Bacteria 265287
4 rootH1_10012543 3300003316 Bacteria 8281
5 rootH2_10003550 3300003320 Bacteria 62481
6 rootH2_10013515 3300003320 Bacteria 9698
7 rootH2_10045322 3300003320 Bacteria 8023
8 rootH2_10175379 3300003320 Bacteria 5638
9 rootL2_10208351 3300003322 Bacteria 5621
10 rootH1_10008147 3300003323 Bacteria 15080
11 rootH1_10014349 3300003323 Bacteria 52043
12 JGI25160J50197_1000858 3300003354 Bacteria 16139
13 Ga0055526_1007598 3300003771 Bacteria 5595
14 Ga0055536_1000003 3300003781 Bacteria 447744
15 Ga0055528_1001356 3300003790 Bacteria 15089
16 Ga0055530_10001635 3300003791 Bacteria 16021
17 Ga0055530_10005390 3300003791 Bacteria 6113
18 Ga0065165_1000009 3300005262 Bacteria 327432
19 Ga0065165_1000802 3300005262 Bacteria 41942
20 Ga0065714_10004242 3300005288 Bacteria 11903
21 Ga0065714_10064437 3300005288 Bacteria 115817
22 Ga0065712_10071286 3300005290 Bacteria 5358
23 Ga0070670_100010251 3300005331 Bacteria 7996
24 Ga0070666_10000026 3300005335 Bacteria 152379
25 Ga0070680_100011589 3300005336 Bacteria 6829
26 Ga0070689_100017399 3300005340 Bacteria 5279
27 Ga0070669_100005025 3300005353 Bacteria 9560
28 Ga0070675_100010987 3300005354 Bacteria 7088
29 Ga0070671_100002822 3300005355 Bacteria 13505
30 Ga0070673_100002584 3300005364 Bacteria 11055
31 Ga0070667_100003571 3300005367 Bacteria 13247
32 Ga0070667_100026789 3300005367 Bacteria 4796
33 Ga0070678_100000383 3300005456 Bacteria 20759
34 Ga0068867_100000436 3300005459 Bacteria 27893
35 Ga0068853_100000700 3300005539 Bacteria 23196
36 Ga0068853_100005000 3300005539 Bacteria 10334
37 Ga0068853_100007499 3300005539 Bacteria 8732
38 Ga0070665_100028160 3300005548 Bacteria 5658
39 Ga0068855_100000831 3300005563 Bacteria 38169
40 Ga0068855_100009939 3300005563 Bacteria 11476
41 Ga0068855_100021857 3300005563 Bacteria 7670
42 Ga0068857_100000290 3300005577 Bacteria 34647
43 Ga0068856_100003301 3300005614 Bacteria 16396
44 Ga0068852_100001044 3300005616 Bacteria 18236
45 Ga0068852_100005941 3300005616 Bacteria 8782
46 Ga0068859_100000047 3300005617 Bacteria 140570
47 Ga0068859_100013582 3300005617 Bacteria 8165
48 Ga0068859_100014020 3300005617 Bacteria 8037
49 Ga0068859_100017517 3300005617 Bacteria 7201
50 Ga0068864_100011673 3300005618 Bacteria 7252
51 Ga0068861_100000501 3300005719 Bacteria 22823
52 Ga0068858_100000677 3300005842 Bacteria 35516
53 Ga0068860_100003320 3300005843 Bacteria 16561
54 Ga0068862_100023306 3300005844 Bacteria 5185
55 Ga0097621_100000179 3300006237 Bacteria 40203
56 Ga0075428_100065144 3300006844 Unclassified 3990
57 Ga0068865_100000695 3300006881 Bacteria 18926
58 Ga0097620_100000047 3300006931 Bacteria 140570
59 Ga0097620_100013582 3300006931 Bacteria 8165
60 Ga0097620_100014020 3300006931 Bacteria 8037
61 Ga0097620_100017517 3300006931 Bacteria 7201
62 Ga0105240_10000185 3300009093 Bacteria 126364
63 Ga0105240_10000263 3300009093 Bacteria 103973
64 Ga0105240_10016798 3300009093 Bacteria 9898
65 Ga0105240_10035411 3300009093 Bacteria 6433
66 Ga0105240_10042785 3300009093 Bacteria 5770
67 Ga0111539_10006458 3300009094 Bacteria 15104
68 Ga0111539_10014019 3300009094 Bacteria 10017
69 Ga0105247_10000920 3300009101 Bacteria 22115
70 Ga0114129_10017161 3300009147 Bacteria 10310
71 Ga0105241_10000237 3300009174 Bacteria 41872
72 Ga0105241_10006965 3300009174 Bacteria 8316
73 Ga0105242_10017466 3300009176 Bacteria 5593
74 Ga0105237_10000154 3300009545 Bacteria 96509
75 Ga0105237_10000168 3300009545 Bacteria 92212
76 Ga0105237_10000572 3300009545 Bacteria 51470
77 Ga0105237_10001078 3300009545 Bacteria 36653
78 Ga0105237_10003201 3300009545 Bacteria 19627
79 Ga0105237_10005236 3300009545 Bacteria 14675
80 Ga0105237_10030761 3300009545 Bacteria 5450
81 Ga0105237_10030790 3300009545 Bacteria 5447
82 Ga0105238_10002153 3300009551 Bacteria 19923
83 Ga0105238_10025876 3300009551 Bacteria 5983
84 Ga0105249_10000878 3300009553 Bacteria 26707
85 Ga0105249_10032274 3300009553 Bacteria 4737
86 Ga0105239_10000016 3300010375 Bacteria 293142
87 Ga0105239_10000137 3300010375 Bacteria 102833
88 Ga0105239_10000163 3300010375 Bacteria 95477
89 Ga0105239_10002174 3300010375 Bacteria 25192
90 Ga0105239_10003654 3300010375 Bacteria 18800
91 Ga0105239_10004611 3300010375 Bacteria 16401
92 Ga0105239_10007442 3300010375 Bacteria 12564
93 Ga0105239_10029524 3300010375 Bacteria 6028
94 Ga0157373_10010664 3300013100 Bacteria 6760
95 Ga0157371_10000009 3300013102 Bacteria 392895
96 Ga0157371_10001423 3300013102 Bacteria 24864
97 Ga0157370_10000304 3300013104 Bacteria 61764
98 Ga0157370_10005681 3300013104 Bacteria 13944
99 Ga0157370_10069630 3300013104 Bacteria 3322
100 Ga0157370_10069652 3300013104 Bacteria 3322
101 Ga0157369_10000006 3300013105 Bacteria 412230
102 Ga0157369_10012794 3300013105 Bacteria 9514
103 Ga0157374_10000445 3300013296 Bacteria 37588
104 Ga0157378_10023172 3300013297 Bacteria 5465
105 Ga0157378_10034064 3300013297 Bacteria 4505
106 Ga0163162_10000663 3300013306 Bacteria 31885
107 Ga0163162_10008539 3300013306 Bacteria 9989
108 Ga0163162_10012197 3300013306 Bacteria 8389
109 Ga0157372_10000030 3300013307 Bacteria 179925
110 Ga0157375_10004408 3300013308 Bacteria 12222
111 Ga0163163_10003651 3300014325 Bacteria 13084
112 Ga0157380_10002024 3300014326 Bacteria 13527
113 Ga0157380_10010523 3300014326 Bacteria 6656
114 Ga0182008_10000588 3300014497 Bacteria 26837
115 Ga0157377_10002336 3300014745 Bacteria 8359
116 Ga0157376_10000533 3300014969 Bacteria 24465
117 Ga0182006_1000238 3300015261 Bacteria 51972
118 Ga0182007_10000001 3300015262 Bacteria 1127301
119 Ga0182005_1000039 3300015265 Bacteria 155210
120 Ga0163161_10000276 3300017792 Bacteria 45031
121 Ga0163161_10000341 3300017792 Bacteria 39792
122 Ga0163161_10002332 3300017792 Bacteria 13605
123 Ga0163161_10020577 3300017792 Bacteria 4632
124 Ga0209437_100041 3300025233 Bacteria 444465
125 Ga0209646_1000002 3300025246 Bacteria 1425781
126 Ga0209026_1000268 3300025250 Bacteria 62806
127 Ga0209026_1002510 3300025250 Bacteria 6824
128 Ga0209455_1001502 3300025272 Bacteria 10461
129 Ga0209673_1000147 3300025273 Bacteria 149397
130 Ga0209130_1001892 3300025284 Bacteria 11835
131 Ga0209676_1000001 3300025292 Bacteria 1852142
132 Ga0209564_1000636 3300025295 Bacteria 53372
133 Ga0209758_1007784 3300025297 Bacteria 7169
134 Ga0209758_1009282 3300025297 Bacteria 6148
135 Ga0209758_1010067 3300025297 Bacteria 5731
136 Ga0209050_1000016 3300025298 Bacteria 729149
137 Ga0209050_1000669 3300025298 Bacteria 52066
138 Ga0209050_1001818 3300025298 Bacteria 20795
139 Ga0207426_1000052 3300025302 Bacteria 389825
140 Ga0207426_1001501 3300025302 Bacteria 19094
141 Ga0209257_1001292 3300025304 Bacteria 30538
142 Ga0207710_10000936 3300025900 Bacteria 15539
143 Ga0207680_10000040 3300025903 Bacteria 71091
144 Ga0207647_10003297 3300025904 Bacteria 12125
145 Ga0207645_10000343 3300025907 Bacteria 38852
146 Ga0207645_10001697 3300025907 Bacteria 17894
147 Ga0207695_10000117 3300025913 Bacteria 237982
148 Ga0207695_10000720 3300025913 Bacteria 64304
149 Ga0207695_10012695 3300025913 Bacteria 10087
150 Ga0207671_10000185 3300025914 Bacteria 95649
151 Ga0207671_10005067 3300025914 Bacteria 12302
152 Ga0207671_10005592 3300025914 Bacteria 11544
153 Ga0207671_10006258 3300025914 Bacteria 10661
154 Ga0207671_10006768 3300025914 Bacteria 10131
155 Ga0207671_10011811 3300025914 Bacteria 7069
156 Ga0207671_10015689 3300025914 Bacteria 5922
157 Ga0207657_10008950 3300025919 Bacteria 10118
158 Ga0207694_10018251 3300025924 Bacteria 5302
159 Ga0207650_10011748 3300025925 Bacteria 6038
160 Ga0207644_10001244 3300025931 Bacteria 16378
161 Ga0207704_10000055 3300025938 Bacteria 78858
162 Ga0207689_10001905 3300025942 Bacteria 19724
163 Ga0207689_10016837 3300025942 Bacteria 6187
164 Ga0207667_10003361 3300025949 Bacteria 19744
165 Ga0207667_10003432 3300025949 Bacteria 19563
166 Ga0207651_10005187 3300025960 Bacteria 6655
167 Ga0207712_10000496 3300025961 Bacteria 32480
168 Ga0207658_10010630 3300025986 Bacteria 6256
169 Ga0207703_10008412 3300026035 Bacteria 8156
170 Ga0207639_10011059 3300026041 Bacteria 6259
171 Ga0207641_10000038 3300026088 Bacteria 205418
172 Ga0207648_10000568 3300026089 Bacteria 41399
173 Ga0207648_10000808 3300026089 Bacteria 35386
174 Ga0207648_10002231 3300026089 Bacteria 20974
175 Ga0207674_10000822 3300026116 Bacteria 40380
176 Ga0207675_100002480 3300026118 Bacteria 18271
177 Ga0207683_10001431 3300026121 Bacteria 21604
178 Ga0207683_10019448 3300026121 Bacteria 5799
179 Ga0207698_10004983 3300026142 Bacteria 8141
180 Ga0268264_10037699 3300028381 Bacteria 3986
181 Ga0307517_10003963 3300028786 Bacteria 22932
182 Ga0307517_10005835 3300028786 Bacteria 18420
183 Ga0307515_10000001 3300028794 Bacteria 4259510
184 Ga0307515_10000061 3300028794 Bacteria 251841
185 Ga0307515_10001274 3300028794 Bacteria 57313
186 Ga0307515_10039186 3300028794 Bacteria 7547
187 Ga0316181_1011936 3300030744 Bacteria 23411
188 Ga0307513_10046837 3300031456 Bacteria 4710
189 Ga0307509_10013666 3300031507 Bacteria 9594
190 Ga0307408_100000975 3300031548 Bacteria 22156
191 Ga0307408_100001307 3300031548 Bacteria 18653
192 Ga0307408_100006516 3300031548 Bacteria 7737
193 Ga0307516_10001621 3300031730 Bacteria 30969
194 Ga0307405_10000018 3300031731 Bacteria 182495
195 Ga0307412_10000507 3300031911 Bacteria 23265
196 Ga0307416_100000025 3300032002 Bacteria 178154
197 Ga0307414_10002665 3300032004 Bacteria 9391
198 Ga0307414_10008844 3300032004 Bacteria 5746
199 Ga0395899_0000199 3300037312 Bacteria 87960
200 Ga0395899_0000201 3300037312 Bacteria 87516
201 Ga0395900_0000157 3300037418 Bacteria 112131
202 Ga0395898_0023745 3300037466 Bacteria 6191
203 Ga0395905_0000195 3300037471 Bacteria 95130
204 Ga0395901_0002695 3300038443 Bacteria 17899
205 Ga0439439_0000706 3300041406 Bacteria 5939
206 Ga0439457_000056 3300042014 Bacteria 23735
207 Ga0466969_0001336 3300044656 Bacteria 13320
208 Ga0466972_0000007 3300044658 Bacteria 277010
209 Ga0466966_0002284 3300044684 Bacteria 12492
210 Ga0466957_0000073 3300044842 Bacteria 39412
211 Ga0466959_0000390 3300045049 Bacteria 25755
212 Ga0495638_0000026 3300046460 Bacteria 347061
213 Ga0495610_0000028 3300046512 Bacteria 272572
214 Ga0495616_0013762 3300046513 Bacteria 4554
215 Ga0495668_0004193 3300046616 Bacteria 10401
216 Ga0495687_000345 3300047443 Bacteria 59578
217 Ga0495686_0000780 3300047472 Bacteria 41711
218 Ga0496122_0000625 3300048925 Bacteria 72309
219 Ga0501300_000477 3300049523 Bacteria 6064
220 Ga0501047_0026304 3300049581 Bacteria 5598
221 Ga0501235_001108 3300049669 Bacteria 5638
222 Ga0501225_0000725 3300049705 Bacteria 10366
223 Ga0501284_00012 3300050005 Bacteria 124103
224 nmdc:mga05p37_6243_c1 3300050507 Bacteria 14030
225 nmdc:mga08y16_4485_c1 3300050511 Bacteria 14587
226 nmdc:mga08y16_52572_c1 3300050511 Bacteria 4262
227 Ga0500635_0000604 3300053080 Bacteria 9463
228 Ga0500578_0000554 3300053086 Bacteria 45443
229 Ga0500583_0000028 3300053092 Bacteria 108276
230 Ga0500583_0000851 3300053092 Bacteria 8795
231 Ga0500562_000010 3300053108 Bacteria 183815
232 Ga0500604_0003030 3300053151 Bacteria 4514
233 Ga0500616_0000068 3300053153 Bacteria 235628
234 Ga0500622_0001874 3300053156 Bacteria 15876
235 Ga0500624_000398 3300053157 Bacteria 13600
236 Ga0500611_000124 3300053727 Bacteria 16507

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300053151 Ga0500604_0003030 Ga0500604_0003030_1472_4438 965
2 3300013297 Ga0157378_10023172 Ga0157378_100231724 979
3 3300003322 rootL2_10208351 rootL2_102083513 1004
4 3300025298 Ga0209050_1001818 Ga0209050_100181816 1013
5 3300013104 Ga0157370_10069630 Ga0157370_100696302 1033
6 3300013104 Ga0157370_10069652 Ga0157370_100696522 1033
7 iso_pu_bacteria 8003151029 8003153505 1050
8 3300031456 Ga0307513_10046837 Ga0307513_100468371 1084
9 3300044842 Ga0466957_0000073 Ga0466957_0000073_30897_34271 1102
10 3300002737 JGI25162J39368_1000012 JGI25162J39368_1000012270 1103
11 3300025233 Ga0209437_100041 Ga0209437_100041312 1103
12 3300025913 Ga0207695_10000117 Ga0207695_10000117161 1110
13 3300025914 Ga0207671_10000185 Ga0207671_1000018559 1110
14 3300028794 Ga0307515_10039186 Ga0307515_100391866 1112
15 3300009545 Ga0105237_10030761 Ga0105237_100307613 1123
16 3300005539 Ga0068853_100007499 Ga0068853_1000074992 1124
17 3300015265 Ga0182005_1000039 Ga0182005_1000039128 1129
18 3300005353 Ga0070669_100005025 Ga0070669_1000050253 1132
19 3300005548 Ga0070665_100028160 Ga0070665_1000281602 1132
20 3300009545 Ga0105237_10000572 Ga0105237_100005727 1132
21 3300025914 Ga0207671_10005067 Ga0207671_100050673 1132
22 3300026089 Ga0207648_10002231 Ga0207648_100022315 1132
23 3300005354 Ga0070675_100010987 Ga0070675_1000109874 1133
24 3300005539 Ga0068853_100000700 Ga0068853_10000070017 1133
25 3300005617 Ga0068859_100014020 Ga0068859_1000140205 1133
26 3300005719 Ga0068861_100000501 Ga0068861_10000050117 1133
27 3300005844 Ga0068862_100023306 Ga0068862_1000233062 1133
28 3300006931 Ga0097620_100014020 Ga0097620_1000140202 1133
29 3300009094 Ga0111539_10006458 Ga0111539_1000645813 1133
30 3300014326 Ga0157380_10010523 Ga0157380_100105232 1133
31 3300014745 Ga0157377_10002336 Ga0157377_100023362 1133
32 3300026041 Ga0207639_10011059 Ga0207639_100110592 1133
33 3300026118 Ga0207675_100002480 Ga0207675_10000248010 1133
34 3300050511 nmdc:mga08y16_52572_c1 nmdc:mga08y16_52572_c1_521_4048 1133
35 3300009176 Ga0105242_10017466 Ga0105242_100174662 1135
36 3300010375 Ga0105239_10000163 Ga0105239_1000016365 1135
37 3300028381 Ga0268264_10037699 Ga0268264_100376992 1135
38 3300009545 Ga0105237_10030790 Ga0105237_100307902 1136
39 3300010375 Ga0105239_10007442 Ga0105239_100074426 1136
40 3300025914 Ga0207671_10005592 Ga0207671_100055922 1136
41 3300025914 Ga0207671_10015689 Ga0207671_100156893 1136
42 3300003323 rootH1_10014349 rootH1_1001434918 1138
43 3300005364 Ga0070673_100002584 Ga0070673_1000025846 1138
44 3300005456 Ga0070678_100000383 Ga0070678_1000003835 1138
45 3300005459 Ga0068867_100000436 Ga0068867_10000043614 1138
46 3300005539 Ga0068853_100005000 Ga0068853_1000050003 1138
47 3300006237 Ga0097621_100000179 Ga0097621_1000001799 1138
48 3300006881 Ga0068865_100000695 Ga0068865_1000006956 1138
49 3300009174 Ga0105241_10000237 Ga0105241_1000023722 1138
50 3300009545 Ga0105237_10000168 Ga0105237_1000016846 1138
51 3300009551 Ga0105238_10002153 Ga0105238_100021537 1138
52 3300013296 Ga0157374_10000445 Ga0157374_1000044528 1138
53 3300025907 Ga0207645_10000343 Ga0207645_1000034321 1138
54 3300025914 Ga0207671_10006768 Ga0207671_100067682 1138
55 3300025938 Ga0207704_10000055 Ga0207704_1000005549 1138
56 3300025960 Ga0207651_10005187 Ga0207651_100051873 1138
57 3300026089 Ga0207648_10000808 Ga0207648_100008089 1138
58 3300026121 Ga0207683_10001431 Ga0207683_100014319 1138
59 3300053108 Ga0500562_000010 Ga0500562_000010_137994_141488 1139
60 3300010375 Ga0105239_10029524 Ga0105239_100295243 1140
61 3300047443 Ga0495687_000345 Ga0495687_000345_38830_42393 1140
62 3300014326 Ga0157380_10002024 Ga0157380_100020248 1141
63 3300014969 Ga0157376_10000533 Ga0157376_100005335 1141
64 3300025919 Ga0207657_10008950 Ga0207657_100089505 1141
65 3300005563 Ga0068855_100021857 Ga0068855_1000218573 1142
66 3300009545 Ga0105237_10005236 Ga0105237_100052363 1142
67 3300010375 Ga0105239_10000137 Ga0105239_1000013713 1142
68 3300013297 Ga0157378_10034064 Ga0157378_100340643 1142
69 3300017792 Ga0163161_10020577 Ga0163161_100205772 1142
70 3300025914 Ga0207671_10011811 Ga0207671_100118113 1142
71 3300025949 Ga0207667_10003361 Ga0207667_100033616 1142
72 3300025907 Ga0207645_10001697 Ga0207645_100016973 1144
73 3300025942 Ga0207689_10001905 Ga0207689_100019055 1144
74 3300026121 Ga0207683_10019448 Ga0207683_100194483 1144
75 3300003320 rootH2_10013515 rootH2_100135156 1145
76 3300049523 Ga0501300_000477 Ga0501300_000477_1544_5011 1145
77 3300003320 rootH2_10003550 rootH2_1000355031 1146
78 3300005288 Ga0065714_10004242 Ga0065714_100042423 1146
79 3300005331 Ga0070670_100010251 Ga0070670_1000102514 1146
80 3300014325 Ga0163163_10003651 Ga0163163_1000365110 1146
81 3300025925 Ga0207650_10011748 Ga0207650_100117484 1146
82 3300005577 Ga0068857_100000290 Ga0068857_10000029028 1148
83 3300005616 Ga0068852_100001044 Ga0068852_10000104413 1148
84 3300009551 Ga0105238_10025876 Ga0105238_100258762 1148
85 3300013104 Ga0157370_10005681 Ga0157370_1000568111 1148
86 3300025904 Ga0207647_10003297 Ga0207647_1000329711 1148
87 3300025924 Ga0207694_10018251 Ga0207694_100182512 1148
88 3300026116 Ga0207674_10000822 Ga0207674_100008227 1148
89 3300032004 Ga0307414_10002665 Ga0307414_100026653 1148
90 3300053156 Ga0500622_0001874 Ga0500622_0001874_11047_14511 1148
91 3300053157 Ga0500624_000398 Ga0500624_000398_6073_9606 1149
92 3300005617 Ga0068859_100013582 Ga0068859_1000135825 1150
93 3300005617 Ga0068859_100017517 Ga0068859_1000175172 1150
94 3300006931 Ga0097620_100013582 Ga0097620_1000135825 1150
95 3300006931 Ga0097620_100017517 Ga0097620_1000175175 1150
96 3300009101 Ga0105247_10000920 Ga0105247_1000092012 1150
97 3300009553 Ga0105249_10032274 Ga0105249_100322743 1150
98 3300025900 Ga0207710_10000936 Ga0207710_100009368 1150
99 3300009093 Ga0105240_10000185 Ga0105240_1000018560 1151
100 3300009545 Ga0105237_10000154 Ga0105237_1000015459 1151
101 3300010375 Ga0105239_10002174 Ga0105239_1000217412 1151
102 3300005843 Ga0068860_100003320 Ga0068860_1000033201 1153
103 3300009545 Ga0105237_10001078 Ga0105237_100010784 1153
104 3300013104 Ga0157370_10000304 Ga0157370_1000030434 1153
105 3300014497 Ga0182008_10000588 Ga0182008_100005889 1153
106 3300047472 Ga0495686_0000780 Ga0495686_0000780_20523_24053 1153
107 3300048925 Ga0496122_0000625 Ga0496122_0000625_54246_57707 1153
108 3300005335 Ga0070666_10000026 Ga0070666_1000002657 1154
109 3300005367 Ga0070667_100026789 Ga0070667_1000267892 1154
110 3300005616 Ga0068852_100005941 Ga0068852_1000059413 1154
111 3300005617 Ga0068859_100000047 Ga0068859_10000004717 1154
112 3300005618 Ga0068864_100011673 Ga0068864_1000116732 1154
113 3300005842 Ga0068858_100000677 Ga0068858_10000067715 1154
114 3300006931 Ga0097620_100000047 Ga0097620_10000004717 1154
115 3300009147 Ga0114129_10017161 Ga0114129_100171616 1154
116 3300009545 Ga0105237_10003201 Ga0105237_1000320114 1154
117 3300013306 Ga0163162_10008539 Ga0163162_100085397 1154
118 3300025903 Ga0207680_10000040 Ga0207680_1000004018 1154
119 3300025914 Ga0207671_10006258 Ga0207671_100062581 1154
120 3300026035 Ga0207703_10008412 Ga0207703_100084123 1154
121 3300026088 Ga0207641_10000038 Ga0207641_1000003899 1154
122 3300026142 Ga0207698_10004983 Ga0207698_100049834 1154
123 3300005367 Ga0070667_100003571 Ga0070667_1000035719 1155
124 3300010375 Ga0105239_10004611 Ga0105239_1000461110 1155
125 3300025986 Ga0207658_10010630 Ga0207658_100106304 1155
126 3300003354 JGI25160J50197_1000858 JGI25160J50197_10008588 1156
127 3300003771 Ga0055526_1007598 Ga0055526_10075982 1156
128 3300003790 Ga0055528_1001356 Ga0055528_10013562 1156
129 3300003791 Ga0055530_10001635 Ga0055530_100016353 1156
130 3300005262 Ga0065165_1000009 Ga0065165_100000913 1156
131 3300025273 Ga0209673_1000147 Ga0209673_100014713 1156
132 3300025295 Ga0209564_1000636 Ga0209564_100063627 1156
133 3300025297 Ga0209758_1007784 Ga0209758_10077842 1156
134 3300025298 Ga0209050_1000669 Ga0209050_100066924 1156
135 3300025302 Ga0207426_1001501 Ga0207426_10015016 1156
136 3300025304 Ga0209257_1001292 Ga0209257_10012927 1156
137 3300046616 Ga0495668_0004193 Ga0495668_0004193_5219_8731 1156
138 iso_pu_bacteria 2911138879 2911140978 1156
139 3300009093 Ga0105240_10035411 Ga0105240_100354112 1157
140 3300009093 Ga0105240_10042785 Ga0105240_100427852 1157
141 3300013100 Ga0157373_10010664 Ga0157373_100106644 1157
142 3300013105 Ga0157369_10012794 Ga0157369_100127945 1157
143 3300005288 Ga0065714_10064437 Ga0065714_1006443764 1158
144 3300013306 Ga0163162_10000663 Ga0163162_1000066324 1158
145 3300017792 Ga0163161_10000276 Ga0163161_1000027610 1158
146 3300025942 Ga0207689_10016837 Ga0207689_100168372 1158
147 3300031548 Ga0307408_100001307 Ga0307408_1000013077 1158
148 3300032004 Ga0307414_10008844 Ga0307414_100088442 1158
149 3300009093 Ga0105240_10000263 Ga0105240_1000026362 1159
150 3300025913 Ga0207695_10000720 Ga0207695_1000072045 1159
151 3300028786 Ga0307517_10005835 Ga0307517_100058357 1159
152 3300031548 Ga0307408_100000975 Ga0307408_10000097518 1159
153 3300031548 Ga0307408_100006516 Ga0307408_1000065163 1159
154 3300031730 Ga0307516_10001621 Ga0307516_1000162118 1159
155 3300031911 Ga0307412_10000507 Ga0307412_1000050712 1159
156 3300050507 nmdc:mga05p37_6243_c1 nmdc:mga05p37_6243_c1_4753_8280 1159
157 iso_pu_bacteria 2896317667 2896321302 1159
158 3300046460 Ga0495638_0000026 Ga0495638_0000026_291544_295053 1160
159 3300053153 Ga0500616_0000068 Ga0500616_0000068_55649_59158 1160
160 3300053727 Ga0500611_000124 Ga0500611_000124_8429_11989 1160
161 3300003323 rootH1_10008147 rootH1_100081473 1161
162 3300005262 Ga0065165_1000802 Ga0065165_100080218 1161
163 3300005563 Ga0068855_100009939 Ga0068855_1000099395 1161
164 3300009094 Ga0111539_10014019 Ga0111539_100140195 1161
165 3300009174 Ga0105241_10006965 Ga0105241_100069655 1161
166 3300013306 Ga0163162_10012197 Ga0163162_100121978 1161
167 3300050511 nmdc:mga08y16_4485_c1 nmdc:mga08y16_4485_c1_9777_13292 1161
168 iso_pu_bacteria 2818991444 2819588340 1161
169 iso_pu_bacteria 2884791551 2884791931 1161
170 iso_pu_bacteria 2929177148 2929179180 1161
171 iso_pu_bacteria 2945977869 2945981583 1161
172 iso_pu_bacteria 2946013367 2946019012 1161
173 iso_pu_bacteria 3003233435 3003234098 1161
174 3300003320 rootH2_10175379 rootH2_101753792 1162
175 3300006844 Ga0075428_100065144 Ga0075428_1000651442 1162
176 3300009093 Ga0105240_10016798 Ga0105240_100167984 1162
177 3300010375 Ga0105239_10003654 Ga0105239_100036545 1162
178 3300025302 Ga0207426_1000052 Ga0207426_1000052131 1162
179 3300025913 Ga0207695_10012695 Ga0207695_100126956 1162
180 3300028794 Ga0307515_10000061 Ga0307515_10000061176 1162
181 3300044656 Ga0466969_0001336 Ga0466969_0001336_8003_11533 1162
182 3300044684 Ga0466966_0002284 Ga0466966_0002284_8219_11749 1162
183 3300045049 Ga0466959_0000390 Ga0466959_0000390_13526_17056 1162
184 3300049581 Ga0501047_0026304 Ga0501047_0026304_1077_4568 1162
185 3300030744 Ga0316181_1011936 Ga0316181_101193616 1163
186 iso_pu_bacteria 2818991460 2819681346 1163
187 3300005290 Ga0065712_10071286 Ga0065712_100712861 1164
188 3300005340 Ga0070689_100017399 Ga0070689_1000173993 1164
189 3300009553 Ga0105249_10000878 Ga0105249_1000087814 1164
190 3300013308 Ga0157375_10004408 Ga0157375_100044087 1164
191 3300025961 Ga0207712_10000496 Ga0207712_1000049616 1164
192 iso_pu_bacteria 2842903701 2842904293 1164
193 3300003316 rootH1_10012543 rootH1_100125433 1165
194 3300003320 rootH2_10045322 rootH2_100453224 1165
195 3300025284 Ga0209130_1001892 Ga0209130_10018922 1165
196 3300031507 Ga0307509_10013666 Ga0307509_100136662 1165
197 3300041406 Ga0439439_0000706 Ga0439439_0000706_1080_4598 1165
198 3300042014 Ga0439457_000056 Ga0439457_000056_14830_18348 1165
199 3300044658 Ga0466972_0000007 Ga0466972_0000007_162755_166273 1165
200 3300049705 Ga0501225_0000725 Ga0501225_0000725_5403_8921 1165
201 3300053086 Ga0500578_0000554 Ga0500578_0000554_12559_16077 1165
202 iso_pu_bacteria 2738541278 2738724311 1165
203 3300005355 Ga0070671_100002822 Ga0070671_1000028229 1166
204 3300005563 Ga0068855_100000831 Ga0068855_10000083121 1166
205 3300005614 Ga0068856_100003301 Ga0068856_1000033016 1166
206 3300010375 Ga0105239_10000016 Ga0105239_10000016174 1166
207 3300025931 Ga0207644_10001244 Ga0207644_100012445 1166
208 3300025949 Ga0207667_10003432 Ga0207667_100034323 1166
209 3300037312 Ga0395899_0000199 Ga0395899_0000199_63246_66764 1166
210 3300037418 Ga0395900_0000157 Ga0395900_0000157_43607_47125 1166
211 3300037466 Ga0395898_0023745 Ga0395898_0023745_617_4135 1166
212 3300037471 Ga0395905_0000195 Ga0395905_0000195_64989_68507 1166
213 3300038443 Ga0395901_0002695 Ga0395901_0002695_2251_5769 1166
214 3300046513 Ga0495616_0013762 Ga0495616_0013762_1007_4543 1166
215 3300053092 Ga0500583_0000028 Ga0500583_0000028_73673_77194 1166
216 3300053092 Ga0500583_0000851 Ga0500583_0000851_4817_8338 1166
217 iso_pu_bacteria 2738541283 2738755494 1166
218 iso_pu_bacteria 2919437846 2919442864 1166
219 3300050005 Ga0501284_00012 Ga0501284_00012_110909_114439 1167
220 3300013102 Ga0157371_10001423 Ga0157371_1000142315 1168
221 3300013307 Ga0157372_10000030 Ga0157372_1000003085 1168
222 3300025250 Ga0209026_1002510 Ga0209026_10025103 1168
223 3300025272 Ga0209455_1001502 Ga0209455_10015022 1168
224 3300028786 Ga0307517_10003963 Ga0307517_100039634 1168
225 3300037312 Ga0395899_0000201 Ga0395899_0000201_46154_49672 1168
226 3300053080 Ga0500635_0000604 Ga0500635_0000604_5089_8613 1168
227 3300049669 Ga0501235_001108 Ga0501235_001108_467_4021 1169
228 iso_pu_bacteria 2929239360 2929241744 1169
229 3300013102 Ga0157371_10000009 Ga0157371_10000009202 1170
230 3300028794 Ga0307515_10001274 Ga0307515_1000127433 1170
231 3300003781 Ga0055536_1000003 Ga0055536_1000003268 1171
232 3300003791 Ga0055530_10005390 Ga0055530_100053903 1171
233 3300013105 Ga0157369_10000006 Ga0157369_10000006128 1171
234 3300015261 Ga0182006_1000238 Ga0182006_100023818 1171
235 3300015262 Ga0182007_10000001 Ga0182007_1000000170 1171
236 3300017792 Ga0163161_10000341 Ga0163161_1000034137 1171
237 3300017792 Ga0163161_10002332 Ga0163161_100023329 1171
238 3300025292 Ga0209676_1000001 Ga0209676_1000001602 1171
239 3300025298 Ga0209050_1000016 Ga0209050_1000016267 1171
240 3300028794 Ga0307515_10000001 Ga0307515_100000011544 1171
241 3300031731 Ga0307405_10000018 Ga0307405_10000018132 1171
242 3300032002 Ga0307416_100000025 Ga0307416_100000025115 1171
243 3300046512 Ga0495610_0000028 Ga0495610_0000028_21304_24852 1171
244 iso_pu_bacteria 2585427687 2586208363 1171
245 iso_pu_bacteria 2738541302 2738855984 1171
246 iso_pu_bacteria 2739367651 2739588393 1171
247 iso_pu_bacteria 2818991437 2819549002 1171
248 iso_pu_bacteria 2842722452 2842723528 1171
249 iso_pu_bacteria 2842909656 2842910037 1171
250 iso_pu_bacteria 2849281842 2849284867 1171
251 iso_pu_bacteria 2896085136 2896087969 1171
252 iso_pu_bacteria 2904445276 2904447481 1171
253 iso_pu_bacteria 2945997725 2946000372 1171
254 iso_pu_bacteria 2954016120 2954017258 1171
255 3300005336 Ga0070680_100011589 Ga0070680_1000115894 1172
256 iso_pu_bacteria 2857627736 2857630594 1172
257 iso_pu_bacteria 2929921140 2929923799 1172
258 3300001979 JGI24740J21852_10000372 JGI24740J21852_100003727 1176
259 3300002738 JGI25154J39366_1000014 JGI25154J39366_10000143 1176
260 3300025246 Ga0209646_1000002 Ga0209646_10000021123 1176
261 3300025250 Ga0209026_1000268 Ga0209026_100026845 1176
262 3300025297 Ga0209758_1009282 Ga0209758_10092822 1176
263 3300025297 Ga0209758_1010067 Ga0209758_10100672 1176
264 3300026089 Ga0207648_10000568 Ga0207648_1000056813 1176

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01568

Molydop_binding

Molydopterin dinucleotide binding domain

584

696

0.97

PF04324

Fer2_BFD

BFD-like [2Fe-2S] binding domain

1112

1161

0.97

PF18267

Rubredoxin_C

Rubredoxin NAD+ reductase C-terminal domain

1019

1089

0.97

PF00070

Pyr_redox

Pyridine nucleotide-disulphide oxidoreductase

849

929

0.96

PF00384

Molybdopterin

Molybdopterin oxidoreductase

61

492

0.93

PF04879

Molybdop_Fe4S4

Molybdopterin oxidoreductase Fe4S4 domain

3

57

0.9

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

707

998

0.89

PF13738

Pyr_redox_3

Pyridine nucleotide-disulphide oxidoreductase

761

978

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
6e6r-assembly1.cif.gz_A 1.50 a resolution structure of the c-terminally truncated [2fe-2s] ferredoxin (bfd) r26e mutant from pseudomonas aeruginosa 0.9781 1108 1162
4e6k-assembly1.cif.gz_G 2.0 a resolution structure of pseudomonas aeruginosa bacterioferritin (bfrb) in complex with bacterioferritin associated ferredoxin (bfd) 0.9632 1108 1162
6e6s-assembly2.cif.gz_B 1.45 a resolution structure of the c-terminally truncated [2fe-2s] ferredoxin (bfd) r26e/k46y mutant from pseudomonas aeruginosa 0.9536 1108 1162
6e6r-assembly1.cif.gz_A 1.50 a resolution structure of the c-terminally truncated [2fe-2s] ferredoxin (bfd) r26e mutant from pseudomonas aeruginosa 0.9447 1108 1162
2jiq-assembly1.cif.gz_A a new catalytic mechanism of periplasmic nitrate reductase from desulfovibrio desulfuricans atcc 27774 from crystallographic and epr data and based on detailed analysis of the sixth ligand 0.9426 1 699
ID Description Score Start End Superfamily
af_P9WFZ3_1_135_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9642 846 877 3.40.50.720
4emjA02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9563 821 938 3.50.50.60
3lb8B02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9466 823 938 3.50.50.60
6e6qA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;BFD-like [2Fe-2S]-binding domain 0.9447 1110 1162 1.10.10.1100
2v45A03 Alpha Beta;3-Layer(aba) Sandwich;Dimethylsulfoxide Reductase; domain 2;Dimethylsulfoxide Reductase, domain 2 0.9435 138 337 3.40.228.10
ID Description Score Start End GO Terms
AF-A0A023GZQ6-F1-model_v4 Assimilatory nitrate reductase 0.9817 352 511 GO:0016020
GO:0016491
GO:0042128
AF-A0A7Y2DH49-F1-model_v4 Molybdopterin-dependent oxidoreductase 0.9764 1 556 GO:0016020
GO:0016491
GO:0042128
GO:0046872
GO:0051539
AF-A0A6M6A9H0-F1-model_v4 Assimilatory nitrate reductase 0.9759 349 511 GO:0016020
GO:0016491
GO:0042128
AF-A0A7Y2DH49-F1-model_v4 Molybdopterin-dependent oxidoreductase 0.9712 1 556 GO:0016020
GO:0016491
GO:0042128
GO:0046872
GO:0051539
AF-A0A3C0G562-F1-model_v4 NAD(P)H-nitrite reductase 0.9672 192 557 GO:0016020
GO:0016491
GO:0042128

Feature Viewer

pLDDT pTM Quality
87.36 0.84 High
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Predicted Structure (AlphaFold2)

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