F369936

General Info

Members Datasets Scaffolds Average Seq Length
260 166 259 247

Family's Representative Sequence

Representative Sequence 3300053153|Ga0500616_0020639|Ga0500616_0020639_609_1484
Length 283
Sequence LSLLQHHVLLLLIAVSKALLQYLFPFTLQDKMNETPHTIDTAKITYQLGRLNIATALSVLANEYPGKVTFSTSFSYEDQVITHEILTNNIPISIFTLDTGRLFAETYSVWSNTNEKYQAHIQPYYPQHATLEAFVAEKGPNAFYESVENRKQCCFLRKVEPLKRALAGNAVWITGLRAEHSPDRKDLPVVEWDESNQLIKYHPLLHWTNDEVKQYIRQHNIPYNPLHDKGFVSIGCAPCTRAIRPGEDFRAGRWECGLHVHQETESLEDRKSERPGAIQYIQT

Samples

Sample ID Description Type Environment
1 2738541278 Niastella sp. CF465 Isolate Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
38 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
57 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
62 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
63 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
73 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
74 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
75 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
76 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
111 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
112 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
113 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
114 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
115 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
116 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
117 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
118 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
119 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
120 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
121 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
122 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
123 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
124 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
125 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
126 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
127 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
128 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
129 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
130 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
131 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
132 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
133 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
134 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
135 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
136 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
137 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
138 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
139 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
140 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
141 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
146 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
147 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
148 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
149 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
150 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
153 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
154 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
155 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
156 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
157 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
158 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
159 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
160 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
161 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
162 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
163 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
164 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
165 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
166 3300059641 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 9R_AW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.85
Metatranscriptomes 0.77
Isolates 0.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.46
Nodule 0
Rhizoplane 0
Rhizosphere 86.54
Stem 0
Stem Tuber 0
Unclassified 5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10024559 3300003320 Bacteria 24277
2 rootH1_10023615 3300003323 Bacteria 8427
3 Ga0070658_10060154 3300005327 Bacteria 3093
4 Ga0070676_10135890 3300005328 Bacteria 1560
5 Ga0070690_100022621 3300005330 Bacteria 3847
6 Ga0070670_100233937 3300005331 Bacteria 1599
7 Ga0070670_100529026 3300005331 Bacteria 1050
8 Ga0070666_10083446 3300005335 Bacteria 2186
9 Ga0070666_10087691 3300005335 Bacteria 2133
10 Ga0070680_100096431 3300005336 Bacteria 2452
11 Ga0070682_100165645 3300005337 Bacteria 1531
12 Ga0068868_100280333 3300005338 Bacteria 1410
13 Ga0070689_100123269 3300005340 Bacteria 2072
14 Ga0070668_100244893 3300005347 Bacteria 1486
15 Ga0070669_100094228 3300005353 Bacteria 2250
16 Ga0070669_100192596 3300005353 Bacteria 1600
17 Ga0070675_100037196 3300005354 Bacteria 3964
18 Ga0070671_100007610 3300005355 Bacteria 8664
19 Ga0070673_100019755 3300005364 Bacteria 4844
20 Ga0070673_100029002 3300005364 Bacteria 4122
21 Ga0070667_100025758 3300005367 Bacteria 4891
22 Ga0070667_100030328 3300005367 Bacteria 4510
23 Ga0070667_100187981 3300005367 Bacteria 1829
24 Ga0070701_10008695 3300005438 Bacteria 4407
25 Ga0070662_100176146 3300005457 Bacteria 1683
26 Ga0068867_100240492 3300005459 Bacteria 1468
27 Ga0070685_10148326 3300005466 Bacteria 1484
28 Ga0070699_100612521 3300005518 Bacteria 993
29 Ga0070679_100043146 3300005530 Bacteria 4493
30 Ga0068853_100003264 3300005539 Bacteria 12398
31 Ga0068853_100047870 3300005539 Bacteria 3670
32 Ga0068853_100097851 3300005539 Bacteria 2591
33 Ga0070672_100048561 3300005543 Bacteria 3299
34 Ga0070686_100012921 3300005544 Bacteria 4768
35 Ga0070665_100000009 3300005548 Bacteria 562640
36 Ga0068855_100042936 3300005563 Bacteria 5357
37 Ga0068855_100303844 3300005563 Bacteria 1766
38 Ga0070664_100027319 3300005564 Bacteria 4742
39 Ga0068857_100135980 3300005577 Bacteria 2219
40 Ga0068856_100008185 3300005614 Bacteria 10194
41 Ga0068856_100037562 3300005614 Bacteria 4752
42 Ga0070702_100028921 3300005615 Bacteria 3008
43 Ga0068852_100115547 3300005616 Bacteria 2447
44 Ga0068852_100545394 3300005616 Bacteria 1159
45 Ga0068859_100000012 3300005617 Bacteria 300376
46 Ga0068859_100000859 3300005617 Bacteria 30939
47 Ga0068859_100022454 3300005617 Bacteria 6327
48 Ga0068859_100298408 3300005617 Bacteria 1704
49 Ga0068864_100027991 3300005618 Bacteria 4763
50 Ga0068864_100049799 3300005618 Bacteria 3604
51 Ga0068864_100094240 3300005618 Bacteria 2646
52 Ga0068851_10042344 3300005834 Bacteria 2292
53 Ga0068851_10056759 3300005834 Bacteria 1998
54 Ga0068870_10050722 3300005840 Bacteria 2194
55 Ga0068863_100013238 3300005841 Bacteria 7957
56 Ga0068863_100168498 3300005841 Bacteria 2100
57 Ga0068858_100004166 3300005842 Bacteria 14229
58 Ga0068858_100276114 3300005842 Bacteria 1600
59 Ga0068860_100000033 3300005843 Bacteria 245461
60 Ga0068860_100001094 3300005843 Bacteria 29839
61 Ga0068860_100003278 3300005843 Bacteria 16660
62 Ga0068860_100009501 3300005843 Bacteria 9658
63 Ga0068860_100016656 3300005843 Bacteria 7169
64 Ga0068860_100017849 3300005843 Bacteria 6911
65 Ga0068862_100003222 3300005844 Bacteria 14130
66 Ga0070712_100009021 3300006175 Bacteria 6281
67 Ga0075366_10090333 3300006195 Bacteria 1834
68 Ga0075366_10198232 3300006195 Bacteria 1221
69 Ga0097621_100041865 3300006237 Bacteria 3689
70 Ga0097621_100056177 3300006237 Bacteria 3216
71 Ga0097621_100413636 3300006237 Bacteria 1209
72 Ga0097621_100452523 3300006237 Bacteria 1157
73 Ga0068871_100013362 3300006358 Bacteria 6092
74 Ga0068871_100025489 3300006358 Bacteria 4602
75 Ga0068871_100111155 3300006358 Bacteria 2305
76 Ga0075431_100111926 3300006847 Bacteria 2817
77 Ga0075429_100094024 3300006880 Bacteria 2614
78 Ga0068865_100304900 3300006881 Bacteria 1276
79 Ga0097620_100000012 3300006931 Bacteria 300376
80 Ga0097620_100000859 3300006931 Bacteria 30939
81 Ga0097620_100022453 3300006931 Bacteria 6327
82 Ga0097620_100298400 3300006931 Bacteria 1704
83 Ga0105240_10010077 3300009093 Bacteria 13303
84 Ga0111539_10018274 3300009094 Bacteria 8685
85 Ga0111539_10084628 3300009094 Bacteria 3728
86 Ga0105245_10455736 3300009098 Bacteria 1288
87 Ga0105247_10092119 3300009101 Bacteria 1925
88 Ga0114129_10007165 3300009147 Bacteria 15870
89 Ga0114129_10251609 3300009147 Bacteria 2371
90 Ga0105241_10002077 3300009174 Bacteria 15145
91 Ga0105241_10003136 3300009174 Bacteria 12295
92 Ga0105241_10281188 3300009174 Bacteria 1421
93 Ga0105242_10296265 3300009176 Unclassified 1475
94 Ga0105237_10027180 3300009545 Bacteria 5843
95 Ga0105237_10029212 3300009545 Bacteria 5608
96 Ga0105249_10020127 3300009553 Bacteria 5960
97 Ga0105249_10127468 3300009553 Bacteria 2425
98 Ga0105239_10002925 3300010375 Bacteria 21322
99 Ga0105246_10065182 3300011119 Bacteria 2547
100 Ga0105246_10075505 3300011119 Bacteria 2386
101 Ga0157373_10002837 3300013100 Bacteria 13108
102 Ga0157371_10021599 3300013102 Bacteria 4725
103 Ga0157370_10114782 3300013104 Bacteria 2516
104 Ga0157369_10005338 3300013105 Bacteria 14973
105 Ga0157374_10667942 3300013296 Bacteria 1051
106 Ga0157378_10000557 3300013297 Bacteria 35516
107 Ga0157378_10001550 3300013297 Bacteria 20758
108 Ga0157378_10014367 3300013297 Bacteria 6932
109 Ga0157378_10025884 3300013297 Bacteria 5169
110 Ga0157378_10497658 3300013297 Bacteria 1217
111 Ga0163162_10000282 3300013306 Bacteria 46472
112 Ga0163162_10003354 3300013306 Bacteria 15318
113 Ga0163162_10008682 3300013306 Bacteria 9888
114 Ga0163162_10015373 3300013306 Bacteria 7477
115 Ga0157372_10048595 3300013307 Bacteria 4716
116 Ga0157372_10115882 3300013307 Bacteria 3072
117 Ga0157375_10052755 3300013308 Bacteria 3999
118 Ga0157375_10204064 3300013308 Bacteria 2133
119 Ga0157375_10210780 3300013308 Bacteria 2100
120 Ga0157375_10245387 3300013308 Bacteria 1951
121 Ga0157375_10601626 3300013308 Bacteria 1259
122 Ga0163163_10108894 3300014325 Bacteria 2798
123 Ga0157379_10092262 3300014968 Bacteria 2717
124 Ga0157379_10124531 3300014968 Bacteria 2319
125 Ga0157376_10061207 3300014969 Bacteria 3164
126 Ga0157376_10185315 3300014969 Bacteria 1905
127 Ga0157376_10216647 3300014969 Bacteria 1771
128 Ga0163161_10010665 3300017792 Bacteria 6363
129 Ga0209646_1001484 3300025246 Bacteria 6242
130 Ga0207656_10004847 3300025321 Bacteria 4725
131 Ga0207710_10127235 3300025900 Bacteria 1221
132 Ga0207680_10000515 3300025903 Bacteria 18445
133 Ga0207680_10068647 3300025903 Bacteria 2187
134 Ga0207680_10084259 3300025903 Bacteria 2005
135 Ga0207645_10017986 3300025907 Bacteria 4660
136 Ga0207645_10086368 3300025907 Bacteria 2016
137 Ga0207705_10028614 3300025909 Bacteria 3972
138 Ga0207654_10003719 3300025911 Bacteria 7701
139 Ga0207695_10084540 3300025913 Bacteria 3204
140 Ga0207671_10011769 3300025914 Bacteria 7086
141 Ga0207671_10159579 3300025914 Bacteria 1746
142 Ga0207662_10015036 3300025918 Bacteria 4348
143 Ga0207652_10015459 3300025921 Bacteria 6204
144 Ga0207681_10124972 3300025923 Bacteria 1893
145 Ga0207650_10109923 3300025925 Bacteria 2132
146 Ga0207650_10248796 3300025925 Bacteria 1439
147 Ga0207650_10590064 3300025925 Bacteria 934
148 Ga0207659_10122765 3300025926 Bacteria 1993
149 Ga0207644_10049779 3300025931 Bacteria 3001
150 Ga0207665_10413273 3300025939 Bacteria 1029
151 Ga0207691_10130244 3300025940 Bacteria 2223
152 Ga0207691_10297379 3300025940 Bacteria 1387
153 Ga0207679_10077962 3300025945 Bacteria 2523
154 Ga0207667_10003319 3300025949 Bacteria 19860
155 Ga0207667_10339642 3300025949 Bacteria 1533
156 Ga0207651_10303465 3300025960 Bacteria 1328
157 Ga0207712_10054799 3300025961 Bacteria 2802
158 Ga0207712_10218457 3300025961 Bacteria 1522
159 Ga0207668_10077815 3300025972 Bacteria 2393
160 Ga0207658_10018296 3300025986 Bacteria 4837
161 Ga0207658_10033261 3300025986 Bacteria 3677
162 Ga0207658_10067976 3300025986 Bacteria 2686
163 Ga0207658_10121882 3300025986 Bacteria 2081
164 Ga0207639_10024604 3300026041 Unclassified 4360
165 Ga0207639_10068456 3300026041 Bacteria 2766
166 Ga0207639_10070214 3300026041 Bacteria 2735
167 Ga0207639_10774914 3300026041 Bacteria 893
168 Ga0207708_10367694 3300026075 Bacteria 1183
169 Ga0207702_10006520 3300026078 Bacteria 10041
170 Ga0207702_10047672 3300026078 Bacteria 3611
171 Ga0207641_10001539 3300026088 Bacteria 22567
172 Ga0207648_10103440 3300026089 Bacteria 2497
173 Ga0207648_10349510 3300026089 Bacteria 1333
174 Ga0207676_10129594 3300026095 Bacteria 2142
175 Ga0207676_10618271 3300026095 Bacteria 1042
176 Ga0207675_100285064 3300026118 Bacteria 1606
177 Ga0207675_100301254 3300026118 Bacteria 1561
178 Ga0207683_10075229 3300026121 Unclassified 2989
179 Ga0207698_10090475 3300026142 Bacteria 2503
180 Ga0207698_10441536 3300026142 Bacteria 1254
181 Ga0268266_10000014 3300028379 Bacteria 644033
182 Ga0268265_10304484 3300028380 Bacteria 1436
183 Ga0268264_10000013 3300028381 Bacteria 513859
184 Ga0268264_10001722 3300028381 Bacteria 20135
185 Ga0268264_10002806 3300028381 Bacteria 15215
186 Ga0268264_10010077 3300028381 Bacteria 7823
187 Ga0268264_10010214 3300028381 Bacteria 7770
188 Ga0268264_10011744 3300028381 Bacteria 7222
189 Ga0307515_10000010 3300028794 Bacteria 651586
190 Ga0307515_10000039 3300028794 Bacteria 323229
191 Ga0265332_10124191 3300031238 Bacteria 1084
192 Ga0307513_10165546 3300031456 Bacteria 2096
193 Ga0307513_10194455 3300031456 Bacteria 1876
194 Ga0307513_10317355 3300031456 Bacteria 1318
195 Ga0307509_10107516 3300031507 Bacteria 2805
196 Ga0307509_10267622 3300031507 Bacteria 1479
197 Ga0307508_10382811 3300031616 Bacteria 998
198 Ga0307416_100245969 3300032002 Bacteria 1737
199 Ga0395899_0273792 3300037312 Bacteria 1151
200 Ga0395905_0028527 3300037471 Bacteria 5261
201 Ga0439436_0000413 3300041404 Bacteria 10744
202 Ga0439439_0011260 3300041406 Bacteria 2151
203 Ga0439439_0017625 3300041406 Bacteria 1758
204 Ga0451841_0373863 3300041498 Bacteria 989
205 Ga0439449_0037016 3300042007 Bacteria 1815
206 Ga0439457_003832 3300042014 Bacteria 4030
207 Ga0439462_0028262 3300042015 Bacteria 1482
208 Ga0451577_0334818 3300042876 Unclassified 1373
209 Ga0466969_0004123 3300044656 Bacteria 7712
210 Ga0466972_0000104 3300044658 Bacteria 73886
211 Ga0466972_0062493 3300044658 Bacteria 1784
212 Ga0466966_0000193 3300044684 Bacteria 40730
213 Ga0453684_0610719 3300044712 Bacteria 1194
214 Ga0466957_0001943 3300044842 Bacteria 10977
215 Ga0466959_0002486 3300045049 Bacteria 11803
216 Ga0495650_0047341 3300046471 Bacteria 1799
217 Ga0495632_0051352 3300046519 Bacteria 2030
218 Ga0495648_0001328 3300046524 Bacteria 24502
219 Ga0495609_0195499 3300046538 Bacteria 847
220 Ga0495668_0002342 3300046616 Bacteria 15781
221 Ga0495611_0024445 3300046648 Bacteria 2628
222 Ga0495625_0147530 3300046660 Bacteria 1583
223 Ga0495687_000106 3300047443 Bacteria 128130
224 Ga0501300_000732 3300049523 Bacteria 4932
225 Ga0501312_044965 3300049528 Bacteria 731
226 Ga0501033_0031966 3300049570 Bacteria 3951
227 Ga0501034_0005007 3300049571 Bacteria 14572
228 Ga0501047_0067097 3300049581 Bacteria 3458
229 Ga0501047_0601434 3300049581 Bacteria 921
230 Ga0501048_0363335 3300049582 Bacteria 1033
231 Ga0501235_027344 3300049669 Bacteria 1279
232 Ga0501225_0001014 3300049705 Bacteria 8815
233 Ga0501044_0006821 3300049823 Bacteria 12583
234 Ga0501044_0039783 3300049823 Bacteria 4903
235 nmdc:mga0k408_337431_c1 3300050493 Bacteria 899
236 nmdc:mga0k408_479856_c1 3300050493 Bacteria 737
237 nmdc:mga0k408_54565_c1 3300050493 Bacteria 1227
238 nmdc:mga05p37_210999_c1 3300050507 Bacteria 2347
239 nmdc:mga05p37_48940_c1 3300050507 Bacteria 5198
240 nmdc:mga06r32_110513_c1 3300050510 Bacteria 2704
241 nmdc:mga08y16_417857_c1 3300050511 Bacteria 1371
242 Ga0500578_0000100 3300053086 Bacteria 99827
243 Ga0500578_0011031 3300053086 Bacteria 5839
244 Ga0500644_0010817 3300053088 Bacteria 2477
245 Ga0500646_0020734 3300053090 Bacteria 1747
246 Ga0500583_0000009 3300053092 Bacteria 160749
247 Ga0500583_0000258 3300053092 Bacteria 18965
248 Ga0500650_0034448 3300053098 Bacteria 2314
249 Ga0500554_090434 3300053102 Bacteria 1017
250 Ga0500556_0025167 3300053104 Bacteria 1964
251 Ga0500572_003785 3300053111 Bacteria 3435
252 Ga0500594_0041917 3300053118 Bacteria 1256
253 Ga0500568_0009973 3300053139 Bacteria 4481
254 Ga0500588_0002111 3300053146 Bacteria 3966
255 Ga0500616_0020639 3300053153 Bacteria 3699
256 Ga0500616_0042554 3300053153 Bacteria 2432
257 Ga0500622_0004860 3300053156 Bacteria 8234
258 Ga0500645_046730 3300053730 Bacteria 1270
259 Ga0587068_032997 3300059641 Bacteria 907

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300013308 Ga0157375_10245387 Ga0157375_102453873 221
2 3300044658 Ga0466972_0062493 Ga0466972_0062493_387_1079 222
3 3300049528 Ga0501312_044965 Ga0501312_044965_20_712 222
4 3300050493 nmdc:mga0k408_479856_c1 nmdc:mga0k408_479856_c1_33_725 222
5 3300042876 Ga0451577_0334818 Ga0451577_0334818_159_863 225
6 iso_pu_bacteria 2738541278 2738725991 226
7 3300044712 Ga0453684_0610719 Ga0453684_0610719_313_1023 228
8 3300026075 Ga0207708_10367694 Ga0207708_103676942 229
9 3300003323 rootH1_10023615 rootH1_100236154 230
10 3300005457 Ga0070662_100176146 Ga0070662_1001761462 230
11 3300005518 Ga0070699_100612521 Ga0070699_1006125211 230
12 3300005539 Ga0068853_100047870 Ga0068853_1000478703 230
13 3300005563 Ga0068855_100303844 Ga0068855_1003038441 230
14 3300005614 Ga0068856_100037562 Ga0068856_1000375623 230
15 3300006195 Ga0075366_10090333 Ga0075366_100903331 230
16 3300006195 Ga0075366_10198232 Ga0075366_101982322 230
17 3300006237 Ga0097621_100413636 Ga0097621_1004136361 230
18 3300009147 Ga0114129_10007165 Ga0114129_1000716510 230
19 3300025246 Ga0209646_1001484 Ga0209646_10014842 230
20 3300025949 Ga0207667_10339642 Ga0207667_103396421 230
21 3300026041 Ga0207639_10070214 Ga0207639_100702142 230
22 3300026078 Ga0207702_10047672 Ga0207702_100476723 230
23 3300026118 Ga0207675_100301254 Ga0207675_1003012541 230
24 3300031456 Ga0307513_10194455 Ga0307513_101944552 230
25 3300031456 Ga0307513_10317355 Ga0307513_103173551 230
26 3300031507 Ga0307509_10267622 Ga0307509_102676222 230
27 3300041404 Ga0439436_0000413 Ga0439436_0000413_2445_3161 230
28 3300041406 Ga0439439_0011260 Ga0439439_0011260_1345_2061 230
29 3300041406 Ga0439439_0017625 Ga0439439_0017625_145_861 230
30 3300041498 Ga0451841_0373863 Ga0451841_0373863_28_744 230
31 3300042007 Ga0439449_0037016 Ga0439449_0037016_524_1240 230
32 3300042014 Ga0439457_003832 Ga0439457_003832_131_847 230
33 3300042015 Ga0439462_0028262 Ga0439462_0028262_131_847 230
34 3300044656 Ga0466969_0004123 Ga0466969_0004123_2476_3207 230
35 3300044658 Ga0466972_0000104 Ga0466972_0000104_62188_62904 230
36 3300044684 Ga0466966_0000193 Ga0466966_0000193_26933_27664 230
37 3300044842 Ga0466957_0001943 Ga0466957_0001943_6569_7285 230
38 3300045049 Ga0466959_0002486 Ga0466959_0002486_2733_3464 230
39 3300046519 Ga0495632_0051352 Ga0495632_0051352_251_967 230
40 3300046616 Ga0495668_0002342 Ga0495668_0002342_449_1165 230
41 3300049581 Ga0501047_0067097 Ga0501047_0067097_648_1364 230
42 3300049582 Ga0501048_0363335 Ga0501048_0363335_241_957 230
43 3300049669 Ga0501235_027344 Ga0501235_027344_150_866 230
44 3300049705 Ga0501225_0001014 Ga0501225_0001014_2181_2897 230
45 3300049823 Ga0501044_0006821 Ga0501044_0006821_449_1165 230
46 3300050493 nmdc:mga0k408_337431_c1 nmdc:mga0k408_337431_c1_86_814 230
47 3300050493 nmdc:mga0k408_54565_c1 nmdc:mga0k408_54565_c1_31_747 230
48 3300050507 nmdc:mga05p37_48940_c1 nmdc:mga05p37_48940_c1_1610_2326 230
49 3300053086 Ga0500578_0000100 Ga0500578_0000100_76363_77079 230
50 3300053086 Ga0500578_0011031 Ga0500578_0011031_2274_2990 230
51 3300053088 Ga0500644_0010817 Ga0500644_0010817_488_1204 230
52 3300053090 Ga0500646_0020734 Ga0500646_0020734_358_1074 230
53 3300053092 Ga0500583_0000009 Ga0500583_0000009_96247_96963 230
54 3300053092 Ga0500583_0000258 Ga0500583_0000258_15491_16207 230
55 3300053098 Ga0500650_0034448 Ga0500650_0034448_513_1241 230
56 3300053102 Ga0500554_090434 Ga0500554_090434_167_883 230
57 3300053104 Ga0500556_0025167 Ga0500556_0025167_251_979 230
58 3300053111 Ga0500572_003785 Ga0500572_003785_917_1633 230
59 3300053118 Ga0500594_0041917 Ga0500594_0041917_156_872 230
60 3300053153 Ga0500616_0042554 Ga0500616_0042554_1174_1890 230
61 3300053730 Ga0500645_046730 Ga0500645_046730_430_1149 230
62 3300059641 Ga0587068_032997 Ga0587068_032997_35_757 230
63 3300005843 Ga0068860_100000033 Ga0068860_10000003359 231
64 3300006175 Ga0070712_100009021 Ga0070712_1000090216 231
65 3300009553 Ga0105249_10127468 Ga0105249_101274683 231
66 3300013306 Ga0163162_10008682 Ga0163162_100086823 231
67 3300025961 Ga0207712_10218457 Ga0207712_102184571 231
68 3300028381 Ga0268264_10000013 Ga0268264_1000001359 231
69 3300046524 Ga0495648_0001328 Ga0495648_0001328_8560_9321 231
70 3300046538 Ga0495609_0195499 Ga0495609_0195499_38_799 231
71 3300046648 Ga0495611_0024445 Ga0495611_0024445_1472_2233 231
72 3300046660 Ga0495625_0147530 Ga0495625_0147530_165_926 231
73 3300047443 Ga0495687_000106 Ga0495687_000106_62530_63291 231
74 3300053139 Ga0500568_0009973 Ga0500568_0009973_3089_3850 231
75 3300053156 Ga0500622_0004860 Ga0500622_0004860_5887_6648 231
76 3300005327 Ga0070658_10060154 Ga0070658_100601543 232
77 3300005331 Ga0070670_100233937 Ga0070670_1002339372 232
78 3300005548 Ga0070665_100000009 Ga0070665_100000009265 232
79 3300005843 Ga0068860_100017849 Ga0068860_1000178496 232
80 3300025909 Ga0207705_10028614 Ga0207705_100286143 232
81 3300025925 Ga0207650_10248796 Ga0207650_102487962 232
82 3300028379 Ga0268266_10000014 Ga0268266_10000014406 232
83 3300028381 Ga0268264_10010077 Ga0268264_100100772 232
84 3300028794 Ga0307515_10000039 Ga0307515_10000039203 232
85 3300005336 Ga0070680_100096431 Ga0070680_1000964312 233
86 3300005337 Ga0070682_100165645 Ga0070682_1001656452 233
87 3300005353 Ga0070669_100192596 Ga0070669_1001925961 233
88 3300005530 Ga0070679_100043146 Ga0070679_1000431463 233
89 3300005539 Ga0068853_100003264 Ga0068853_1000032649 233
90 3300005563 Ga0068855_100042936 Ga0068855_1000429365 233
91 3300005614 Ga0068856_100008185 Ga0068856_1000081853 233
92 3300005617 Ga0068859_100298408 Ga0068859_1002984082 233
93 3300005618 Ga0068864_100094240 Ga0068864_1000942403 233
94 3300005843 Ga0068860_100001094 Ga0068860_1000010947 233
95 3300005844 Ga0068862_100003222 Ga0068862_1000032222 233
96 3300006847 Ga0075431_100111926 Ga0075431_1001119262 233
97 3300006880 Ga0075429_100094024 Ga0075429_1000940242 233
98 3300006931 Ga0097620_100298400 Ga0097620_1002984002 233
99 3300009093 Ga0105240_10010077 Ga0105240_1001007711 233
100 3300009174 Ga0105241_10002077 Ga0105241_100020776 233
101 3300009176 Ga0105242_10296265 Ga0105242_102962651 233
102 3300009545 Ga0105237_10027180 Ga0105237_100271804 233
103 3300010375 Ga0105239_10002925 Ga0105239_1000292511 233
104 3300013100 Ga0157373_10002837 Ga0157373_1000283710 233
105 3300013102 Ga0157371_10021599 Ga0157371_100215995 233
106 3300013104 Ga0157370_10114782 Ga0157370_101147822 233
107 3300013105 Ga0157369_10005338 Ga0157369_1000533811 233
108 3300013307 Ga0157372_10048595 Ga0157372_100485952 233
109 3300013307 Ga0157372_10115882 Ga0157372_101158822 233
110 3300025913 Ga0207695_10084540 Ga0207695_100845402 233
111 3300025914 Ga0207671_10159579 Ga0207671_101595791 233
112 3300025921 Ga0207652_10015459 Ga0207652_100154593 233
113 3300025923 Ga0207681_10124972 Ga0207681_101249722 233
114 3300025926 Ga0207659_10122765 Ga0207659_101227652 233
115 3300025949 Ga0207667_10003319 Ga0207667_100033195 233
116 3300025986 Ga0207658_10033261 Ga0207658_100332612 233
117 3300026041 Ga0207639_10024604 Ga0207639_100246042 233
118 3300026041 Ga0207639_10774914 Ga0207639_107749141 233
119 3300026078 Ga0207702_10006520 Ga0207702_100065206 233
120 3300026142 Ga0207698_10090475 Ga0207698_100904753 233
121 3300028380 Ga0268265_10304484 Ga0268265_103044841 233
122 3300028381 Ga0268264_10011744 Ga0268264_100117445 233
123 3300005328 Ga0070676_10135890 Ga0070676_101358901 234
124 3300005347 Ga0070668_100244893 Ga0070668_1002448932 234
125 3300005459 Ga0068867_100240492 Ga0068867_1002404922 234
126 3300005577 Ga0068857_100135980 Ga0068857_1001359802 234
127 3300005843 Ga0068860_100003278 Ga0068860_1000032784 234
128 3300006237 Ga0097621_100041865 Ga0097621_1000418651 234
129 3300006358 Ga0068871_100013362 Ga0068871_1000133623 234
130 3300009174 Ga0105241_10281188 Ga0105241_102811881 234
131 3300009553 Ga0105249_10020127 Ga0105249_100201272 234
132 3300013296 Ga0157374_10667942 Ga0157374_106679421 234
133 3300013297 Ga0157378_10014367 Ga0157378_100143676 234
134 3300013306 Ga0163162_10003354 Ga0163162_100033547 234
135 3300013306 Ga0163162_10015373 Ga0163162_100153738 234
136 3300013308 Ga0157375_10204064 Ga0157375_102040642 234
137 3300014968 Ga0157379_10092262 Ga0157379_100922622 234
138 3300014969 Ga0157376_10216647 Ga0157376_102166472 234
139 3300017792 Ga0163161_10010665 Ga0163161_100106652 234
140 3300025907 Ga0207645_10086368 Ga0207645_100863683 234
141 3300025939 Ga0207665_10413273 Ga0207665_104132731 234
142 3300025972 Ga0207668_10077815 Ga0207668_100778152 234
143 3300026089 Ga0207648_10349510 Ga0207648_103495102 234
144 3300028381 Ga0268264_10002806 Ga0268264_1000280612 234
145 3300032002 Ga0307416_100245969 Ga0307416_1002459691 234
146 3300049581 Ga0501047_0601434 Ga0501047_0601434_165_893 234
147 3300049823 Ga0501044_0039783 Ga0501044_0039783_79_807 234
148 3300053146 Ga0500588_0002111 Ga0500588_0002111_226_957 234
149 3300005335 Ga0070666_10087691 Ga0070666_100876912 235
150 3300005539 Ga0068853_100097851 Ga0068853_1000978512 235
151 3300005617 Ga0068859_100000859 Ga0068859_10000085929 235
152 3300006931 Ga0097620_100000859 Ga0097620_10000085929 235
153 3300025903 Ga0207680_10068647 Ga0207680_100686472 235
154 3300025925 Ga0207650_10590064 Ga0207650_105900641 235
155 3300026041 Ga0207639_10068456 Ga0207639_100684562 235
156 3300028794 Ga0307515_10000010 Ga0307515_10000010301 235
157 3300031238 Ga0265332_10124191 Ga0265332_101241911 235
158 3300031456 Ga0307513_10165546 Ga0307513_101655462 235
159 3300031507 Ga0307509_10107516 Ga0307509_101075162 235
160 3300031616 Ga0307508_10382811 Ga0307508_103828111 235
161 3300005330 Ga0070690_100022621 Ga0070690_1000226213 236
162 3300005331 Ga0070670_100529026 Ga0070670_1005290261 236
163 3300005335 Ga0070666_10083446 Ga0070666_100834462 236
164 3300005338 Ga0068868_100280333 Ga0068868_1002803332 236
165 3300005340 Ga0070689_100123269 Ga0070689_1001232692 236
166 3300005353 Ga0070669_100094228 Ga0070669_1000942283 236
167 3300005354 Ga0070675_100037196 Ga0070675_1000371962 236
168 3300005355 Ga0070671_100007610 Ga0070671_1000076102 236
169 3300005364 Ga0070673_100019755 Ga0070673_1000197552 236
170 3300005364 Ga0070673_100029002 Ga0070673_1000290023 236
171 3300005367 Ga0070667_100030328 Ga0070667_1000303283 236
172 3300005367 Ga0070667_100187981 Ga0070667_1001879812 236
173 3300005438 Ga0070701_10008695 Ga0070701_100086953 236
174 3300005466 Ga0070685_10148326 Ga0070685_101483262 236
175 3300005543 Ga0070672_100048561 Ga0070672_1000485612 236
176 3300005544 Ga0070686_100012921 Ga0070686_1000129215 236
177 3300005564 Ga0070664_100027319 Ga0070664_1000273192 236
178 3300005615 Ga0070702_100028921 Ga0070702_1000289213 236
179 3300005616 Ga0068852_100115547 Ga0068852_1001155472 236
180 3300005617 Ga0068859_100022454 Ga0068859_1000224542 236
181 3300005618 Ga0068864_100027991 Ga0068864_1000279914 236
182 3300005834 Ga0068851_10056759 Ga0068851_100567592 236
183 3300005840 Ga0068870_10050722 Ga0068870_100507222 236
184 3300005841 Ga0068863_100013238 Ga0068863_1000132386 236
185 3300005842 Ga0068858_100276114 Ga0068858_1002761142 236
186 3300005843 Ga0068860_100009501 Ga0068860_1000095014 236
187 3300006358 Ga0068871_100111155 Ga0068871_1001111551 236
188 3300006931 Ga0097620_100022453 Ga0097620_1000224532 236
189 3300009094 Ga0111539_10018274 Ga0111539_100182746 236
190 3300009094 Ga0111539_10084628 Ga0111539_100846281 236
191 3300009098 Ga0105245_10455736 Ga0105245_104557361 236
192 3300009147 Ga0114129_10251609 Ga0114129_102516091 236
193 3300011119 Ga0105246_10075505 Ga0105246_100755052 236
194 3300013297 Ga0157378_10000557 Ga0157378_100005579 236
195 3300013297 Ga0157378_10001550 Ga0157378_1000155012 236
196 3300013297 Ga0157378_10025884 Ga0157378_100258844 236
197 3300013308 Ga0157375_10210780 Ga0157375_102107801 236
198 3300013308 Ga0157375_10601626 Ga0157375_106016262 236
199 3300025903 Ga0207680_10084259 Ga0207680_100842591 236
200 3300025907 Ga0207645_10017986 Ga0207645_100179862 236
201 3300025918 Ga0207662_10015036 Ga0207662_100150362 236
202 3300025931 Ga0207644_10049779 Ga0207644_100497791 236
203 3300025940 Ga0207691_10130244 Ga0207691_101302441 236
204 3300025940 Ga0207691_10297379 Ga0207691_102973792 236
205 3300025945 Ga0207679_10077962 Ga0207679_100779622 236
206 3300025960 Ga0207651_10303465 Ga0207651_103034651 236
207 3300025986 Ga0207658_10067976 Ga0207658_100679763 236
208 3300025986 Ga0207658_10121882 Ga0207658_101218822 236
209 3300026089 Ga0207648_10103440 Ga0207648_101034403 236
210 3300026095 Ga0207676_10618271 Ga0207676_106182711 236
211 3300026118 Ga0207675_100285064 Ga0207675_1002850642 236
212 3300026121 Ga0207683_10075229 Ga0207683_100752292 236
213 3300028381 Ga0268264_10010214 Ga0268264_100102142 236
214 3300037312 Ga0395899_0273792 Ga0395899_0273792_122_868 236
215 3300037471 Ga0395905_0028527 Ga0395905_0028527_1699_2445 236
216 3300046471 Ga0495650_0047341 Ga0495650_0047341_708_1448 236
217 3300049523 Ga0501300_000732 Ga0501300_000732_2102_2842 236
218 3300049570 Ga0501033_0031966 Ga0501033_0031966_3106_3852 236
219 3300049571 Ga0501034_0005007 Ga0501034_0005007_3883_4629 236
220 3300050507 nmdc:mga05p37_210999_c1 nmdc:mga05p37_210999_c1_1134_1883 236
221 3300050510 nmdc:mga06r32_110513_c1 nmdc:mga06r32_110513_c1_1428_2177 236
222 3300050511 nmdc:mga08y16_417857_c1 nmdc:mga08y16_417857_c1_118_870 236
223 3300005367 Ga0070667_100025758 Ga0070667_1000257582 237
224 3300005616 Ga0068852_100545394 Ga0068852_1005453942 237
225 3300005617 Ga0068859_100000012 Ga0068859_100000012262 237
226 3300005618 Ga0068864_100049799 Ga0068864_1000497992 237
227 3300005834 Ga0068851_10042344 Ga0068851_100423443 237
228 3300005841 Ga0068863_100168498 Ga0068863_1001684982 237
229 3300005842 Ga0068858_100004166 Ga0068858_1000041663 237
230 3300005843 Ga0068860_100016656 Ga0068860_1000166566 237
231 3300006237 Ga0097621_100056177 Ga0097621_1000561771 237
232 3300006237 Ga0097621_100452523 Ga0097621_1004525231 237
233 3300006358 Ga0068871_100025489 Ga0068871_1000254895 237
234 3300006881 Ga0068865_100304900 Ga0068865_1003049002 237
235 3300006931 Ga0097620_100000012 Ga0097620_100000012262 237
236 3300009101 Ga0105247_10092119 Ga0105247_100921192 237
237 3300009174 Ga0105241_10003136 Ga0105241_100031368 237
238 3300009545 Ga0105237_10029212 Ga0105237_100292123 237
239 3300011119 Ga0105246_10065182 Ga0105246_100651821 237
240 3300013297 Ga0157378_10497658 Ga0157378_104976582 237
241 3300013306 Ga0163162_10000282 Ga0163162_1000028234 237
242 3300013308 Ga0157375_10052755 Ga0157375_100527553 237
243 3300014325 Ga0163163_10108894 Ga0163163_101088943 237
244 3300014968 Ga0157379_10124531 Ga0157379_101245311 237
245 3300014969 Ga0157376_10061207 Ga0157376_100612071 237
246 3300014969 Ga0157376_10185315 Ga0157376_101853151 237
247 3300025321 Ga0207656_10004847 Ga0207656_100048474 237
248 3300025900 Ga0207710_10127235 Ga0207710_101272352 237
249 3300025903 Ga0207680_10000515 Ga0207680_1000051511 237
250 3300025911 Ga0207654_10003719 Ga0207654_100037196 237
251 3300025914 Ga0207671_10011769 Ga0207671_100117694 237
252 3300025925 Ga0207650_10109923 Ga0207650_101099233 237
253 3300025961 Ga0207712_10054799 Ga0207712_100547991 237
254 3300025986 Ga0207658_10018296 Ga0207658_100182963 237
255 3300026088 Ga0207641_10001539 Ga0207641_100015392 237
256 3300026095 Ga0207676_10129594 Ga0207676_101295942 237
257 3300026142 Ga0207698_10441536 Ga0207698_104415362 237
258 3300028381 Ga0268264_10001722 Ga0268264_1000172212 237
259 3300053153 Ga0500616_0020639 Ga0500616_0020639_609_1484 237
260 3300003320 rootH2_10024559 rootH2_100245597 238

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01507

PAPS_reduct

Phosphoadenosine phosphosulfate reductase family

67

242

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
7lhs-assembly2.cif.gz_B crystal structure of adenosine-5'-phosphosulfate reductase from mycobacterium tuberculosis in a complex with substrate aps 0.8576 6 214
6vpu-assembly3.cif.gz_C 1.90 angstrom resolution crystal structure phosphoadenosine phosphosulfate reductase (cysh) from vibrio vulnificus 0.8535 5 203
7rge-assembly1.cif.gz_A crystal structure of phosphoadenylyl-sulfate (paps) reductase from candida auris, phosphate complex 0.851 11 205
7lhu-assembly2.cif.gz_B crystal structure of adenosine-5'-phosphosulfate reductase from mycobacterium tuberculosis in a complex with product amp 0.8501 6 214
7lhs-assembly1.cif.gz_A crystal structure of adenosine-5'-phosphosulfate reductase from mycobacterium tuberculosis in a complex with substrate aps 0.8488 6 212
ID Description Score Start End Superfamily
af_P17854_2_216_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8464 5 202 3.40.50.620
2goyE00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8418 12 224 3.40.50.620
2goyE00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8068 12 224 3.40.50.620
af_P9WIK3_10_254_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8049 6 231 3.40.50.620
2oq2D00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.785 16 229 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A4Q3SK84-F1-model_v4 Phosphoadenylyl-sulfate reductase 0.9831 8 142 GO:0003824
GO:0051536
AF-A0A4Q3VIW1-F1-model_v4 Phosphoadenylyl-sulfate reductase (EC 1.8.4.8) 0.9788 12 198 GO:0004604
GO:0019379
AF-A0A4Q3VPX6-F1-model_v4 Phosphoadenylyl-sulfate reductase (EC 1.8.4.8) 0.9738 7 194 GO:0004604
GO:0019379
GO:0051536
AF-A0A662AVE9-F1-model_v4 Phosphoadenylyl-sulfate reductase (EC 1.8.4.8) 0.973 12 186 GO:0004604
GO:0019379
GO:0051536
AF-A0A4Q3ERI3-F1-model_v4 Phosphoadenylyl-sulfate reductase (EC 1.8.4.8) 0.9685 10 194 GO:0004604
GO:0019379
GO:0051536

Feature Viewer

pLDDT pTM Quality
84.95 0.84 High
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Predicted Structure (AlphaFold2)

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