F365799

General Info

Members Datasets Scaffolds Average Seq Length
255 181 212 979

Family's Representative Sequence

Representative Sequence 3300031251|Ga0265327_10000021|Ga0265327_10000021226
Length 1016
Sequence VTFAGGESRSAPPGIRGRSRIPSAGRLGFLDADAGARLTELGWNNEASVELLWSLSRSPDADAALKTLIRLRAELGDDWAELDQALRERPCLRGRLFAVIGASTALGDHLVAEPSTWRLLNCDELPSAEQMRTELLAAVEARPEPDQCERGNLVYRAAVTGPPAPLRLKLAYRNLLLQLAARDVASTVEDEPVLPFVAVCEYLSDLADAALTAALAVGIGEVLGDAPLEHRIGVMAMGKCGARELNYVSDVDIIFLSEPADNVSNRIAGEMMRVGSLAFFDVDAALRPEGKQGTLTRTLDSHVTYYKRWAKTWEFQALLKARPMTGDLQLCADYVAALSPMVWTACERDDFVPEVQAMRRRVEASVPEGMRERELKLGRGGLRDVEFAVQLLQMVHGRVDESLRVQSTVDALTALKDGGYVGRDDGANLTASYEFLRLLEHRLQLQRLKRTHLLPALDDEEAMRWLARAAHVRPDGEHDVTQVLREEIRRVSSRVRRMHEKLFYRPLLDAVTRFDTDELRLSDTAAVRRLAALGYVKPENALGHLRALVSAAGRRGQIQELLLPTLLEWLAGTPDPDAGLLNYRKLCDAIVDREWFLRLLRDEGVVAQRLMMVLGSSAYVPELLMRAPDVIRMYVDGANGPRLIEPDPEDTAKGLIASGARHSDPKRAIAAARSLRRAELARVASADILGMLDVPEVCRALSSVWAAVLNTALDAVIAASIAERGAPAPARIAVIGMGRLGGGELGYGSDADVLFVCQPVADGDEAETVAVKWANMIAEQVRSLLGTPSLDPPLELDTGLRPEGRNGPVVRSLASYQAYYRQWAQPWEIQALLRAHQVAGDNELGLEFLHVIDKTRYPEGGIDATAVREIRRIKARVDSERLPRGADPTTHTKLGRGGLSDIEWTVQLEQLKYAHKYPSLHNTSTLQTLDAIAEADLIDAEGVAKLKEAWLTATEARNALVLVRGKPTDQLPSSGPVLRAVAHVAGWPDGDAGGFLDHYLRVTRRAKAVVVEVFGE

Samples

Sample ID Description Type Environment
1 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
2 2547132424 Nocardia nova SH22a Isolate Unclassified
3 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
4 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
5 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
6 2643221692 Nocardia sp. Root136 Isolate Unclassified
7 2643221715 Mycobacterium sp. Root265 Isolate Unclassified
8 2738541264 Mycobacterium sp. OK889 Isolate Unclassified
9 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
10 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
11 2738541356 Mycobacterium sp. OK887 Isolate Unclassified
12 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
13 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
14 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
15 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
16 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
17 2751185725 Microbispora sp. NRRL B-24597 Isolate Unclassified
18 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
19 2751185792 Kitasatospora arboriphila NRRL B-24581 Isolate Unclassified
20 2842134933 Mycolicibacterium obuense SEMIA 442 Isolate Nodule
21 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
22 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
23 2902792274 Mycolicibacterium sp. P9-64 Isolate Unclassified
24 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
25 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
26 2902837492 Mycolicibacterium sp. P1-18 Isolate Unclassified
27 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
28 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
29 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
30 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
31 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
32 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
33 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
34 2922554459 Rhodococcus sp. 66b Isolate Unclassified
35 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
36 2929212328 Mycolicibacterium sp. R-73050 Hybrid assembly Isolate Unclassified
37 2939582691 Mycolicibacterium sp. 624 Isolate Rhizosphere
38 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
39 2956939328 Lolliginicoccus suaedae LNNU 331112 Isolate Rhizosphere
40 2974315732 Rhodococcus sp. SORGH_AS 301 Isolate Unclassified
41 2984523437 Rhodococcus sp. SORGH_AS303 Isolate Aerial Root
42 3001119090 Lolliginicoccus lacisalsi G463 Isolate Rhizosphere
43 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
44 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
45 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
46 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
47 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
48 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
49 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
50 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
51 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
52 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
53 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
54 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
55 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
56 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
57 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
58 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
59 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
60 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
61 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
62 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
63 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
64 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
65 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
66 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
67 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
68 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
69 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
70 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
71 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
72 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
73 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
74 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
75 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
76 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
77 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
78 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
79 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
80 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
81 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
82 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
83 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
84 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
108 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
109 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
110 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
111 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
112 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
113 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
114 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
115 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
116 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
117 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
118 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
119 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
120 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
121 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
122 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
123 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
124 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
125 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
126 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
127 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
128 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
129 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
130 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
131 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
132 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
133 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
134 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
135 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
136 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
137 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
138 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
139 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
140 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
141 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
142 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
143 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
144 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
145 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
146 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
147 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
148 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
149 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
150 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
151 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
152 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
153 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
154 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
155 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
156 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
157 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
158 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
159 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
167 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
168 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
169 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
170 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
172 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
173 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
174 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
175 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
176 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
177 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
178 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
179 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
180 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
181 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 83.14
Metatranscriptomes 0
Isolates 16.86

Biome Distribution

Category Percentage (%)
Aerial Root 0.39
Bulb 0
Endosphere 12.16
Nodule 0.39
Rhizoplane 12.94
Rhizosphere 52.16
Stem 0
Stem Tuber 0
Unclassified 21.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24744J21845_10000587 3300002077 Bacteria 6544
2 Ga0055540_1000081 3300003792 Bacteria 109820
3 Ga0055540_1000120 3300003792 Bacteria 82415
4 Ga0055540_1000805 3300003792 Bacteria 21217
5 Ga0055540_1001918 3300003792 Bacteria 11625
6 Ga0070658_10000108 3300005327 Bacteria 73704
7 Ga0070683_100031591 3300005329 Bacteria 4817
8 Ga0068868_100014275 3300005338 Bacteria 5851
9 Ga0070668_100001571 3300005347 Bacteria 16508
10 Ga0070668_100003803 3300005347 Bacteria 11155
11 Ga0070671_100002915 3300005355 Bacteria 13297
12 Ga0070673_100026246 3300005364 Bacteria 4301
13 Ga0070667_100000226 3300005367 Bacteria 64893
14 Ga0070710_10000917 3300005437 Bacteria 14047
15 Ga0070711_100000208 3300005439 Bacteria 31129
16 Ga0070700_100008845 3300005441 Bacteria 5502
17 Ga0070663_100012483 3300005455 Bacteria 5375
18 Ga0070678_100000253 3300005456 Bacteria 24788
19 Ga0070665_100011025 3300005548 Bacteria 9135
20 Ga0070665_100060450 3300005548 Bacteria 3797
21 Ga0070702_100003676 3300005615 Bacteria 6904
22 Ga0068859_100000266 3300005617 Bacteria 52170
23 Ga0068859_100011341 3300005617 Bacteria 8967
24 Ga0068863_100000843 3300005841 Bacteria 30754
25 Ga0068863_100004945 3300005841 Bacteria 13139
26 Ga0068858_100000569 3300005842 Bacteria 38556
27 Ga0068858_100008688 3300005842 Bacteria 9751
28 Ga0068860_100000166 3300005843 Bacteria 108310
29 Ga0068862_100000247 3300005844 Bacteria 60325
30 Ga0068862_100001437 3300005844 Bacteria 21995
31 Ga0075365_10005455 3300006038 Bacteria 6859
32 Ga0075365_10005903 3300006038 Bacteria 6664
33 Ga0075363_100000333 3300006048 Bacteria 14075
34 Ga0075363_100007865 3300006048 Bacteria 4932
35 Ga0075364_10003472 3300006051 Bacteria 8970
36 Ga0075364_10012769 3300006051 Bacteria 5151
37 Ga0075364_10017112 3300006051 Bacteria 4523
38 Ga0075364_10021098 3300006051 Bacteria 4102
39 Ga0070712_100000740 3300006175 Bacteria 19270
40 Ga0075369_10003791 3300006186 Bacteria 5534
41 Ga0075369_10003855 3300006186 Bacteria 5498
42 Ga0075369_10010585 3300006186 Bacteria 3610
43 Ga0075430_100005319 3300006846 Bacteria 10861
44 Ga0075431_100008253 3300006847 Bacteria 10412
45 Ga0068865_100000869 3300006881 Bacteria 17113
46 Ga0097620_100000266 3300006931 Bacteria 52170
47 Ga0097620_100011341 3300006931 Bacteria 8967
48 Ga0105247_10000006 3300009101 Bacteria 416061
49 Ga0105243_10001578 3300009148 Bacteria 19928
50 Ga0105248_10031741 3300009177 Bacteria 5901
51 Ga0105249_10000008 3300009553 Bacteria 341271
52 Ga0105249_10023137 3300009553 Bacteria 5573
53 Ga0105239_10040273 3300010375 Bacteria 5120
54 Ga0105239_10042373 3300010375 Bacteria 4988
55 Ga0157374_10004458 3300013296 Bacteria 11754
56 Ga0157378_10000520 3300013297 Bacteria 36656
57 Ga0163162_10003026 3300013306 Bacteria 16062
58 Ga0163162_10052811 3300013306 Bacteria 4083
59 Ga0157375_10003255 3300013308 Bacteria 14101
60 Ga0157380_10008200 3300014326 Bacteria 7445
61 Ga0157377_10004996 3300014745 Bacteria 6185
62 Ga0209051_1000076 3300025303 Bacteria 204355
63 Ga0209051_1000761 3300025303 Bacteria 34319
64 Ga0209051_1001141 3300025303 Bacteria 24261
65 Ga0207692_10003429 3300025898 Bacteria 6192
66 Ga0207710_10000114 3300025900 Bacteria 101498
67 Ga0207688_10004511 3300025901 Bacteria 7581
68 Ga0207681_10008724 3300025923 Bacteria 6193
69 Ga0207644_10008231 3300025931 Bacteria 6831
70 Ga0207706_10008779 3300025933 Bacteria 9303
71 Ga0207709_10007679 3300025935 Bacteria 5982
72 Ga0207669_10007119 3300025937 Bacteria 5151
73 Ga0207689_10020258 3300025942 Bacteria 5601
74 Ga0207667_10048061 3300025949 Bacteria 4513
75 Ga0207712_10000011 3300025961 Bacteria 412321
76 Ga0207668_10010264 3300025972 Bacteria 5655
77 Ga0207658_10000071 3300025986 Bacteria 112481
78 Ga0207703_10005851 3300026035 Bacteria 9848
79 Ga0207703_10018915 3300026035 Bacteria 5382
80 Ga0207678_10015982 3300026067 Bacteria 6591
81 Ga0207641_10000683 3300026088 Bacteria 36606
82 Ga0207675_100002449 3300026118 Bacteria 18381
83 Ga0207675_100033077 3300026118 Bacteria 4818
84 Ga0207683_10000334 3300026121 Bacteria 42872
85 Ga0207683_10026991 3300026121 Bacteria 4962
86 Ga0207698_10027899 3300026142 Bacteria 4016
87 Ga0268266_10013333 3300028379 Bacteria 7083
88 Ga0268266_10024872 3300028379 Bacteria 5095
89 Ga0268265_10000007 3300028380 Bacteria 431817
90 Ga0268264_10000007 3300028381 Bacteria 815790
91 Ga0265327_10000021 3300031251 Bacteria 417788
92 Ga0265327_10003061 3300031251 Bacteria 16523
93 Ga0307410_10017892 3300031852 Bacteria 4268
94 Ga0316584_0050514 3300036712 Bacteria 3109
95 Ga0436364_0860919 3300037853 Bacteria 6703
96 Ga0436365_0607374 3300039437 Bacteria 23010
97 Ga0436365_1303089 3300039437 Bacteria 4349
98 Ga0436365_1896722 3300039437 Bacteria 34564
99 Ga0439465_0005358 3300041413 Bacteria 4095
100 Ga0451853_3856665 3300041512 Bacteria 3036
101 Ga0439445_0001769 3300042004 Bacteria 4763
102 Ga0439448_0005573 3300042005 Bacteria 3592
103 Ga0466972_0008940 3300044658 Bacteria 5024
104 Ga0466965_0004352 3300044683 Bacteria 6295
105 Ga0466968_0001206 3300044735 Bacteria 9151
106 Ga0466970_0009929 3300044765 Bacteria 4818
107 Ga0466957_0005875 3300044842 Bacteria 6915
108 Ga0466960_0000305 3300044901 Bacteria 17124
109 Ga0466960_0000383 3300044901 Bacteria 15126
110 Ga0466959_0016874 3300045049 Bacteria 5343
111 Ga0466958_0007387 3300045836 Bacteria 6041
112 Ga0466967_0012640 3300045976 Bacteria 6474
113 Ga0495641_0010542 3300046461 Bacteria 5346
114 Ga0495640_0018341 3300046533 Bacteria 5195
115 Ga0495668_0000634 3300046616 Bacteria 42294
116 Ga0495672_0003312 3300047320 Bacteria 13919
117 Ga0495683_0000234 3300047323 Bacteria 50555
118 Ga0495673_0002455 3300047469 Bacteria 13030
119 Ga0495686_0003719 3300047472 Bacteria 13021
120 Ga0495593_0009557 3300047673 Bacteria 5628
121 Ga0496100_0000023 3300048903 Bacteria 121977
122 Ga0496100_0001402 3300048903 Bacteria 11793
123 Ga0496100_0001835 3300048903 Bacteria 10615
124 Ga0496100_0008881 3300048903 Bacteria 5623
125 Ga0496101_0000056 3300048904 Bacteria 135446
126 Ga0496101_0000057 3300048904 Bacteria 134204
127 Ga0496101_0000548 3300048904 Bacteria 23001
128 Ga0496101_0003172 3300048904 Bacteria 10183
129 Ga0496101_0014282 3300048904 Bacteria 5334
130 Ga0496102_0000025 3300048905 Bacteria 227201
131 Ga0496102_0000277 3300048905 Bacteria 65492
132 Ga0496102_0001667 3300048905 Bacteria 19507
133 Ga0496103_0000022 3300048906 Bacteria 227208
134 Ga0496103_0000256 3300048906 Bacteria 51135
135 Ga0496103_0000889 3300048906 Bacteria 21586
136 Ga0496103_0001027 3300048906 Bacteria 19533
137 Ga0496104_0003659 3300048907 Bacteria 13274
138 Ga0496104_0010274 3300048907 Bacteria 8360
139 Ga0496105_0005253 3300048908 Bacteria 9813
140 Ga0496106_0000626 3300048909 Bacteria 25274
141 Ga0496106_0001354 3300048909 Bacteria 18349
142 Ga0496107_0000056 3300048910 Bacteria 60293
143 Ga0496107_0001442 3300048910 Bacteria 14711
144 Ga0496107_0018182 3300048910 Bacteria 4947
145 Ga0496108_0000506 3300048911 Bacteria 30708
146 Ga0496109_0000037 3300048912 Bacteria 151906
147 Ga0496110_0004968 3300048913 Bacteria 10384
148 Ga0496111_0008763 3300048914 Bacteria 6715
149 Ga0496112_0021884 3300048915 Bacteria 6085
150 Ga0496113_0005309 3300048916 Bacteria 8022
151 Ga0496114_0000285 3300048917 Bacteria 36880
152 Ga0496114_0000671 3300048917 Bacteria 25392
153 Ga0496114_0008889 3300048917 Bacteria 7964
154 Ga0496116_0000059 3300048919 Bacteria 274491
155 Ga0496116_0003196 3300048919 Bacteria 16390
156 Ga0496117_0000055 3300048920 Bacteria 274518
157 Ga0496117_0000595 3300048920 Bacteria 59503
158 Ga0496117_0003447 3300048920 Bacteria 18392
159 Ga0496118_0000058 3300048921 Bacteria 227245
160 Ga0496118_0000225 3300048921 Bacteria 98639
161 Ga0496118_0001085 3300048921 Bacteria 42355
162 Ga0496118_0003840 3300048921 Bacteria 18483
163 Ga0496119_0000668 3300048922 Bacteria 45998
164 Ga0496119_0001753 3300048922 Bacteria 25294
165 Ga0496119_0001939 3300048922 Bacteria 23572
166 Ga0496120_0002577 3300048923 Bacteria 18062
167 Ga0496121_0000060 3300048924 Bacteria 276682
168 Ga0496121_0000068 3300048924 Bacteria 259210
169 Ga0496121_0004107 3300048924 Bacteria 19963
170 Ga0496122_0000085 3300048925 Bacteria 208310
171 Ga0496123_0002321 3300048926 Bacteria 23901
172 Ga0496123_0010927 3300048926 Bacteria 7945
173 Ga0496124_0000065 3300048927 Bacteria 223594
174 Ga0496124_0062301 3300048927 Bacteria 3121
175 Ga0496125_0000008 3300048928 Bacteria 704677
176 Ga0496126_0000062 3300048929 Bacteria 259210
177 Ga0496126_0002848 3300048929 Bacteria 22633
178 Ga0496126_0005466 3300048929 Bacteria 14488
179 Ga0496126_0006522 3300048929 Bacteria 12987
180 Ga0501032_0010393 3300049569 Bacteria 6713
181 Ga0501034_0015385 3300049571 Bacteria 7863
182 Ga0501034_0087536 3300049571 Bacteria 3114
183 Ga0501036_0004338 3300049572 Bacteria 11451
184 Ga0501037_0002804 3300049573 Bacteria 12628
185 Ga0501037_0022342 3300049573 Bacteria 4680
186 Ga0501046_0008213 3300049580 Bacteria 9116
187 Ga0501047_0001295 3300049581 Bacteria 24656
188 Ga0501047_0001593 3300049581 Bacteria 22144
189 Ga0501048_0015540 3300049582 Bacteria 5622
190 Ga0501067_0025274 3300049583 Bacteria 3292
191 Ga0501069_0015976 3300049585 Bacteria 4026
192 Ga0501070_0003668 3300049586 Bacteria 13274
193 Ga0501070_0012154 3300049586 Bacteria 7264
194 Ga0501080_0071384 3300049742 Bacteria 3230
195 Ga0501035_0000147 3300049822 Bacteria 85803
196 Ga0501044_0000152 3300049823 Bacteria 85715
197 Ga0501044_0013151 3300049823 Bacteria 8958
198 Ga0501044_0018700 3300049823 Bacteria 7420
199 nmdc:mga03n38_11793_c1 3300050490 Bacteria 3269
200 nmdc:mga03n38_3387_c1 3300050490 Bacteria 5110
201 nmdc:mga00v17_15038_c1 3300050491 Bacteria 4337
202 nmdc:mga00v17_3175_c1 3300050491 Bacteria 8468
203 nmdc:mga0yw44_3001_c1 3300050492 Bacteria 7369
204 nmdc:mga0yw44_4290_c1 3300050492 Bacteria 6506
205 nmdc:mga0qj67_11206_c1 3300050509 Bacteria 6714
206 nmdc:mga0sz30_2696_c1 3300050516 Bacteria 6330
207 nmdc:mga0sz30_3017_c2 3300050516 Bacteria 5419
208 nmdc:mga0sz30_3687_c1 3300050516 Bacteria 5522
209 Ga0500635_0001862 3300053080 Bacteria 5143
210 Ga0500652_001086 3300053131 Bacteria 8789
211 Ga0500627_0004994 3300053158 Bacteria 4346
212 Ga0500645_000074 3300053730 Bacteria 78753

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049582 Ga0501048_0015540 Ga0501048_0015540_2996_5593 849
2 3300041512 Ga0451853_3856665 Ga0451853_3856665_341_2977 854
3 3300042005 Ga0439448_0005573 Ga0439448_0005573_752_3412 872
4 iso_pu_bacteria 2974315732 2974317008 890
5 3300049583 Ga0501067_0025274 Ga0501067_0025274_15_2720 892
6 3300049571 Ga0501034_0087536 Ga0501034_0087536_390_3098 897
7 iso_pu_bacteria 2523231044 2523382291 936
8 3300053158 Ga0500627_0004994 Ga0500627_0004994_152_3082 940
9 3300005355 Ga0070671_100002915 Ga0070671_1000029153 942
10 3300005548 Ga0070665_100060450 Ga0070665_1000604502 942
11 3300005841 Ga0068863_100004945 Ga0068863_1000049455 942
12 3300025931 Ga0207644_10008231 Ga0207644_100082313 942
13 3300028379 Ga0268266_10013333 Ga0268266_100133334 942
14 3300048907 Ga0496104_0010274 Ga0496104_0010274_4574_7540 942
15 3300053080 Ga0500635_0001862 Ga0500635_0001862_365_3220 945
16 3300053131 Ga0500652_001086 Ga0500652_001086_2471_5326 945
17 3300048903 Ga0496100_0000023 Ga0496100_0000023_9768_12674 946
18 3300048904 Ga0496101_0000057 Ga0496101_0000057_94115_97021 946
19 3300048905 Ga0496102_0001667 Ga0496102_0001667_12529_15435 946
20 3300048906 Ga0496103_0000256 Ga0496103_0000256_28326_31232 946
21 3300048909 Ga0496106_0001354 Ga0496106_0001354_11289_14195 946
22 3300048910 Ga0496107_0000056 Ga0496107_0000056_37287_40193 946
23 3300048912 Ga0496109_0000037 Ga0496109_0000037_13432_16338 946
24 3300048913 Ga0496110_0004968 Ga0496110_0004968_4843_7749 946
25 3300048914 Ga0496111_0008763 Ga0496111_0008763_2575_5481 946
26 3300048917 Ga0496114_0008889 Ga0496114_0008889_4141_7047 946
27 3300048919 Ga0496116_0003196 Ga0496116_0003196_3803_6709 946
28 3300048920 Ga0496117_0003447 Ga0496117_0003447_9160_12066 946
29 3300048921 Ga0496118_0003840 Ga0496118_0003840_3600_6506 946
30 3300048922 Ga0496119_0001753 Ga0496119_0001753_14829_17735 946
31 3300048924 Ga0496121_0000068 Ga0496121_0000068_135569_138475 946
32 3300048925 Ga0496122_0000085 Ga0496122_0000085_176345_179251 946
33 3300048926 Ga0496123_0002321 Ga0496123_0002321_3317_6223 946
34 3300048927 Ga0496124_0000065 Ga0496124_0000065_85120_88026 946
35 3300048928 Ga0496125_0000008 Ga0496125_0000008_566203_569109 946
36 3300048929 Ga0496126_0000062 Ga0496126_0000062_135569_138475 946
37 3300046616 Ga0495668_0000634 Ga0495668_0000634_22001_24931 950
38 3300005327 Ga0070658_10000108 Ga0070658_1000010872 954
39 3300037853 Ga0436364_0860919 Ga0436364_0860919_2240_5164 954
40 3300039437 Ga0436365_1896722 Ga0436365_1896722_11214_14138 954
41 3300047472 Ga0495686_0003719 Ga0495686_0003719_9559_12459 956
42 iso_pu_bacteria 2751185734 2753075354 958
43 iso_pu_bacteria 2870721527 2870729273 958
44 3300044658 Ga0466972_0008940 Ga0466972_0008940_1385_4354 959
45 3300045049 Ga0466959_0016874 Ga0466959_0016874_2340_5309 959
46 iso_pu_bacteria 8047710418 8047719979 959
47 3300039437 Ga0436365_1303089 Ga0436365_1303089_119_3043 961
48 3300003792 Ga0055540_1000081 Ga0055540_100008112 962
49 3300003792 Ga0055540_1000120 Ga0055540_100012012 962
50 3300025303 Ga0209051_1000076 Ga0209051_1000076102 962
51 3300003792 Ga0055540_1001918 Ga0055540_10019185 963
52 3300010375 Ga0105239_10042373 Ga0105239_100423732 963
53 3300053730 Ga0500645_000074 Ga0500645_000074_53160_56090 963
54 iso_pu_bacteria 2547132424 2548694430 963
55 iso_pu_bacteria 2919713450 2919716667 963
56 iso_pu_bacteria 2751185725 2753038170 964
57 iso_pu_bacteria 2751185792 2753326681 964
58 3300045976 Ga0466967_0012640 Ga0466967_0012640_295_3240 965
59 3300006038 Ga0075365_10005903 Ga0075365_100059032 966
60 3300048927 Ga0496124_0062301 Ga0496124_0062301_190_3102 966
61 3300050492 nmdc:mga0yw44_4290_c1 nmdc:mga0yw44_4290_c1_1498_4458 966
62 3300048903 Ga0496100_0001835 Ga0496100_0001835_972_3905 967
63 3300048904 Ga0496101_0000056 Ga0496101_0000056_103881_106814 967
64 3300048905 Ga0496102_0000025 Ga0496102_0000025_15137_18070 967
65 3300048906 Ga0496103_0000022 Ga0496103_0000022_15137_18070 967
66 3300048910 Ga0496107_0018182 Ga0496107_0018182_944_3877 967
67 3300048919 Ga0496116_0000059 Ga0496116_0000059_256422_259355 967
68 3300048920 Ga0496117_0000055 Ga0496117_0000055_15137_18070 967
69 3300048921 Ga0496118_0000058 Ga0496118_0000058_15137_18070 967
70 3300048922 Ga0496119_0000668 Ga0496119_0000668_14377_17310 967
71 3300048923 Ga0496120_0002577 Ga0496120_0002577_8646_11579 967
72 3300048924 Ga0496121_0000060 Ga0496121_0000060_244983_247916 967
73 3300048929 Ga0496126_0002848 Ga0496126_0002848_10013_12946 967
74 iso_pu_bacteria 2738541274 2738703867 968
75 iso_pu_bacteria 2738543028 2739330741 968
76 3300006038 Ga0075365_10005455 Ga0075365_100054552 969
77 3300006186 Ga0075369_10010585 Ga0075369_100105852 969
78 3300047323 Ga0495683_0000234 Ga0495683_0000234_31200_34187 969
79 3300050492 nmdc:mga0yw44_3001_c1 nmdc:mga0yw44_3001_c1_775_3735 969
80 3300044683 Ga0466965_0004352 Ga0466965_0004352_2331_5330 970
81 3300044901 Ga0466960_0000383 Ga0466960_0000383_9069_12062 970
82 3300046461 Ga0495641_0010542 Ga0495641_0010542_997_3939 970
83 3300046533 Ga0495640_0018341 Ga0495640_0018341_1635_4577 970
84 3300047673 Ga0495593_0009557 Ga0495593_0009557_1567_4509 970
85 3300009553 Ga0105249_10023137 Ga0105249_100231371 972
86 3300013297 Ga0157378_10000520 Ga0157378_100005202 972
87 3300013306 Ga0163162_10003026 Ga0163162_100030266 972
88 3300013308 Ga0157375_10003255 Ga0157375_100032557 972
89 3300014326 Ga0157380_10008200 Ga0157380_100082005 972
90 3300025923 Ga0207681_10008724 Ga0207681_100087241 972
91 3300036712 Ga0316584_0050514 Ga0316584_0050514_49_2979 972
92 3300045836 Ga0466958_0007387 Ga0466958_0007387_2808_5744 972
93 3300048903 Ga0496100_0008881 Ga0496100_0008881_706_3624 972
94 3300048906 Ga0496103_0000889 Ga0496103_0000889_122_3040 972
95 3300048917 Ga0496114_0000285 Ga0496114_0000285_32265_35183 972
96 iso_pu_bacteria 2904535858 2904540020 972
97 3300005329 Ga0070683_100031591 Ga0070683_1000315912 973
98 3300031251 Ga0265327_10003061 Ga0265327_100030617 973
99 3300049569 Ga0501032_0010393 Ga0501032_0010393_1412_4396 973
100 3300049571 Ga0501034_0015385 Ga0501034_0015385_1859_4843 973
101 3300049573 Ga0501037_0022342 Ga0501037_0022342_645_3629 973
102 3300049580 Ga0501046_0008213 Ga0501046_0008213_3066_6050 973
103 3300049581 Ga0501047_0001295 Ga0501047_0001295_5171_8155 973
104 3300049585 Ga0501069_0015976 Ga0501069_0015976_432_3416 973
105 3300049586 Ga0501070_0012154 Ga0501070_0012154_1669_4653 973
106 3300049742 Ga0501080_0071384 Ga0501080_0071384_89_3073 973
107 3300049823 Ga0501044_0013151 Ga0501044_0013151_1885_4869 973
108 iso_pu_bacteria 2738541308 2738889882 973
109 iso_pu_bacteria 2551306166 2552107004 974
110 iso_pu_bacteria 2565956761 2566996906 974
111 iso_pu_bacteria 2643221692 2644516642 974
112 iso_pu_bacteria 2738543005 2739203505 974
113 iso_pu_bacteria 2744054611 2744953926 974
114 iso_pu_bacteria 2922554459 2922560523 974
115 iso_pu_bacteria 2928142448 2928146146 974
116 iso_pu_bacteria 2956939328 2956941734 974
117 iso_pu_bacteria 2984523437 2984525215 974
118 iso_pu_bacteria 2738543011 2739238297 975
119 iso_pu_bacteria 2738543034 2739366644 975
120 iso_pu_bacteria 2889300758 2889302256 975
121 iso_pu_bacteria 2904765812 2904769424 975
122 iso_pu_bacteria 2904770941 2904772980 975
123 iso_pu_bacteria 2908811453 2908814195 975
124 iso_pu_bacteria 2919420072 2919422654 975
125 iso_pu_bacteria 2919432681 2919435093 975
126 iso_pu_bacteria 2939743619 2939748316 975
127 iso_pu_bacteria 3001119090 3001119092 976
128 iso_pu_bacteria 2643221687 2644488886 977
129 iso_pu_bacteria 2902837492 2902838833 977
130 3300031251 Ga0265327_10000021 Ga0265327_10000021226 978
131 3300009148 Ga0105243_10001578 Ga0105243_1000157813 979
132 3300025935 Ga0207709_10007679 Ga0207709_100076793 979
133 3300044765 Ga0466970_0009929 Ga0466970_0009929_242_3211 979
134 iso_pu_bacteria 2738541264 2738667995 979
135 iso_pu_bacteria 2738541356 2739147065 979
136 iso_pu_bacteria 2939582691 2939589302 979
137 3300006846 Ga0075430_100005319 Ga0075430_1000053196 980
138 3300006847 Ga0075431_100008253 Ga0075431_1000082535 980
139 3300050509 nmdc:mga0qj67_11206_c1 nmdc:mga0qj67_11206_c1_1828_4770 980
140 iso_pu_bacteria 2643221715 2644638610 980
141 iso_pu_bacteria 2902810491 2902812801 980
142 3300003792 Ga0055540_1000805 Ga0055540_100080512 981
143 3300025303 Ga0209051_1000761 Ga0209051_10007619 981
144 3300025303 Ga0209051_1001141 Ga0209051_10011419 981
145 iso_pu_bacteria 2842134933 2842137447 981
146 iso_pu_bacteria 2902792274 2902797007 981
147 iso_pu_bacteria 2902799365 2902802840 981
148 iso_pu_bacteria 2929212328 2929216328 981
149 3300044735 Ga0466968_0001206 Ga0466968_0001206_2612_5569 982
150 3300044842 Ga0466957_0005875 Ga0466957_0005875_2882_5839 982
151 3300044901 Ga0466960_0000305 Ga0466960_0000305_13998_16955 982
152 3300048904 Ga0496101_0014282 Ga0496101_0014282_2168_5140 982
153 3300048916 Ga0496113_0005309 Ga0496113_0005309_211_3183 982
154 3300048926 Ga0496123_0010927 Ga0496123_0010927_2643_5615 982
155 3300006051 Ga0075364_10017112 Ga0075364_100171122 983
156 3300005347 Ga0070668_100001571 Ga0070668_10000157111 984
157 3300005364 Ga0070673_100026246 Ga0070673_1000262462 984
158 3300005367 Ga0070667_100000226 Ga0070667_10000022639 984
159 3300005441 Ga0070700_100008845 Ga0070700_1000088453 984
160 3300005617 Ga0068859_100000266 Ga0068859_1000002665 984
161 3300005841 Ga0068863_100000843 Ga0068863_10000084325 984
162 3300005842 Ga0068858_100008688 Ga0068858_1000086885 984
163 3300005843 Ga0068860_100000166 Ga0068860_10000016650 984
164 3300005844 Ga0068862_100000247 Ga0068862_10000024739 984
165 3300006051 Ga0075364_10021098 Ga0075364_100210982 984
166 3300006931 Ga0097620_100000266 Ga0097620_1000002665 984
167 3300009101 Ga0105247_10000006 Ga0105247_10000006350 984
168 3300009553 Ga0105249_10000008 Ga0105249_1000000867 984
169 3300013296 Ga0157374_10004458 Ga0157374_100044582 984
170 3300013306 Ga0163162_10052811 Ga0163162_100528112 984
171 3300014745 Ga0157377_10004996 Ga0157377_100049962 984
172 3300025898 Ga0207692_10003429 Ga0207692_100034292 984
173 3300025900 Ga0207710_10000114 Ga0207710_1000011438 984
174 3300025901 Ga0207688_10004511 Ga0207688_100045114 984
175 3300025942 Ga0207689_10020258 Ga0207689_100202582 984
176 3300025949 Ga0207667_10048061 Ga0207667_100480613 984
177 3300025961 Ga0207712_10000011 Ga0207712_10000011252 984
178 3300025986 Ga0207658_10000071 Ga0207658_1000007181 984
179 3300026035 Ga0207703_10018915 Ga0207703_100189152 984
180 3300026067 Ga0207678_10015982 Ga0207678_100159824 984
181 3300026088 Ga0207641_10000683 Ga0207641_1000068325 984
182 3300026118 Ga0207675_100033077 Ga0207675_1000330772 984
183 3300026121 Ga0207683_10026991 Ga0207683_100269912 984
184 3300026142 Ga0207698_10027899 Ga0207698_100278992 984
185 3300028379 Ga0268266_10024872 Ga0268266_100248722 984
186 3300028380 Ga0268265_10000007 Ga0268265_10000007385 984
187 3300028381 Ga0268264_10000007 Ga0268264_10000007511 984
188 3300031852 Ga0307410_10017892 Ga0307410_100178922 984
189 3300048903 Ga0496100_0001402 Ga0496100_0001402_2634_5606 984
190 3300048904 Ga0496101_0000548 Ga0496101_0000548_3970_6942 984
191 3300048904 Ga0496101_0003172 Ga0496101_0003172_3344_6310 984
192 3300048905 Ga0496102_0000277 Ga0496102_0000277_54019_56985 984
193 3300048906 Ga0496103_0001027 Ga0496103_0001027_10227_13193 984
194 3300048907 Ga0496104_0003659 Ga0496104_0003659_386_3358 984
195 3300048908 Ga0496105_0005253 Ga0496105_0005253_5963_8935 984
196 3300048909 Ga0496106_0000626 Ga0496106_0000626_2756_5728 984
197 3300048910 Ga0496107_0001442 Ga0496107_0001442_9152_12124 984
198 3300048911 Ga0496108_0000506 Ga0496108_0000506_26713_29682 984
199 3300048915 Ga0496112_0021884 Ga0496112_0021884_1621_4590 984
200 3300048917 Ga0496114_0000671 Ga0496114_0000671_10180_13152 984
201 3300048920 Ga0496117_0000595 Ga0496117_0000595_7462_10428 984
202 3300048921 Ga0496118_0000225 Ga0496118_0000225_64439_67405 984
203 3300048922 Ga0496119_0001939 Ga0496119_0001939_10039_13005 984
204 3300048924 Ga0496121_0004107 Ga0496121_0004107_8830_11796 984
205 3300048929 Ga0496126_0006522 Ga0496126_0006522_9466_12432 984
206 3300002077 JGI24744J21845_10000587 JGI24744J21845_100005873 985
207 3300005338 Ga0068868_100014275 Ga0068868_1000142752 985
208 3300005347 Ga0070668_100003803 Ga0070668_1000038033 985
209 3300005437 Ga0070710_10000917 Ga0070710_1000091712 985
210 3300005439 Ga0070711_100000208 Ga0070711_10000020827 985
211 3300005455 Ga0070663_100012483 Ga0070663_1000124833 985
212 3300005456 Ga0070678_100000253 Ga0070678_1000002533 985
213 3300005548 Ga0070665_100011025 Ga0070665_1000110252 985
214 3300005615 Ga0070702_100003676 Ga0070702_1000036764 985
215 3300005617 Ga0068859_100011341 Ga0068859_1000113415 985
216 3300005842 Ga0068858_100000569 Ga0068858_10000056920 985
217 3300005844 Ga0068862_100001437 Ga0068862_1000014373 985
218 3300006048 Ga0075363_100000333 Ga0075363_1000003336 985
219 3300006048 Ga0075363_100007865 Ga0075363_1000078653 985
220 3300006051 Ga0075364_10003472 Ga0075364_100034725 985
221 3300006051 Ga0075364_10012769 Ga0075364_100127692 985
222 3300006175 Ga0070712_100000740 Ga0070712_1000007409 985
223 3300006186 Ga0075369_10003791 Ga0075369_100037912 985
224 3300006186 Ga0075369_10003855 Ga0075369_100038552 985
225 3300006881 Ga0068865_100000869 Ga0068865_1000008692 985
226 3300006931 Ga0097620_100011341 Ga0097620_1000113415 985
227 3300009177 Ga0105248_10031741 Ga0105248_100317415 985
228 3300010375 Ga0105239_10040273 Ga0105239_100402732 985
229 3300025933 Ga0207706_10008779 Ga0207706_100087796 985
230 3300025937 Ga0207669_10007119 Ga0207669_100071192 985
231 3300025972 Ga0207668_10010264 Ga0207668_100102644 985
232 3300026035 Ga0207703_10005851 Ga0207703_100058514 985
233 3300026118 Ga0207675_100002449 Ga0207675_10000244911 985
234 3300026121 Ga0207683_10000334 Ga0207683_1000033419 985
235 3300039437 Ga0436365_0607374 Ga0436365_0607374_4784_7768 985
236 3300041413 Ga0439465_0005358 Ga0439465_0005358_689_3661 985
237 3300042004 Ga0439445_0001769 Ga0439445_0001769_1390_4362 985
238 3300047320 Ga0495672_0003312 Ga0495672_0003312_1693_4671 985
239 3300047469 Ga0495673_0002455 Ga0495673_0002455_5437_8415 985
240 3300048921 Ga0496118_0001085 Ga0496118_0001085_1768_4752 985
241 3300048929 Ga0496126_0005466 Ga0496126_0005466_9470_12454 985
242 3300049572 Ga0501036_0004338 Ga0501036_0004338_3735_6719 985
243 3300049573 Ga0501037_0002804 Ga0501037_0002804_7360_10344 985
244 3300049581 Ga0501047_0001593 Ga0501047_0001593_1775_4753 985
245 3300049586 Ga0501070_0003668 Ga0501070_0003668_8373_11357 985
246 3300049822 Ga0501035_0000147 Ga0501035_0000147_38517_41495 985
247 3300049823 Ga0501044_0000152 Ga0501044_0000152_38409_41387 985
248 3300049823 Ga0501044_0018700 Ga0501044_0018700_2145_5129 985
249 3300050490 nmdc:mga03n38_11793_c1 nmdc:mga03n38_11793_c1_215_3193 985
250 3300050490 nmdc:mga03n38_3387_c1 nmdc:mga03n38_3387_c1_381_3338 985
251 3300050491 nmdc:mga00v17_15038_c1 nmdc:mga00v17_15038_c1_1042_4020 985
252 3300050491 nmdc:mga00v17_3175_c1 nmdc:mga00v17_3175_c1_3240_6197 985
253 3300050516 nmdc:mga0sz30_2696_c1 nmdc:mga0sz30_2696_c1_1720_4689 985
254 3300050516 nmdc:mga0sz30_3017_c2 nmdc:mga0sz30_3017_c2_2081_5038 985
255 3300050516 nmdc:mga0sz30_3687_c1 nmdc:mga0sz30_3687_c1_1769_4741 985

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03710

GlnE

Glutamate-ammonia ligase adenylyltransferase

607

851

0.96

PF08335

GlnD_UR_UTase

GlnD PII-uridylyltransferase

356

503

0.93

PF08335

GlnD_UR_UTase

GlnD PII-uridylyltransferase

871

1014

0.86

PF03710

GlnE

Glutamate-ammonia ligase adenylyltransferase

94

336

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
1v4a-assembly1.cif.gz_A structure of the n-terminal domain of escherichia coli glutamine synthetase adenylyltransferase 0.8757 577 982
1v4a-assembly1.cif.gz_A structure of the n-terminal domain of escherichia coli glutamine synthetase adenylyltransferase 0.8175 577 982
3k7d-assembly3.cif.gz_B c-terminal (adenylylation) domain of e.coli glutamine synthetase adenylyltransferase 0.7686 476 983
3k7d-assembly3.cif.gz_A c-terminal (adenylylation) domain of e.coli glutamine synthetase adenylyltransferase 0.7686 473 983
3k7d-assembly3.cif.gz_A c-terminal (adenylylation) domain of e.coli glutamine synthetase adenylyltransferase 0.7631 473 983
ID Description Score Start End Superfamily
af_P9WN27_598_833_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9976 589 821 3.30.460.10
af_P9WN27_98_319_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9914 93 311 3.30.460.10
af_P9WN27_598_833_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9808 589 821 3.30.460.10
af_P9WN27_840_994_1.20.120.330 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Nucleotidyltransferases 0.9756 829 983 1.20.120.330
af_P9WN27_98_319_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9737 93 311 3.30.460.10
ID Description Score Start End GO Terms
AF-A0A655ABE0-F1-model_v4 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) 0.9898 585 983 GO:0000820
GO:0005524
GO:0005829
GO:0008882
GO:0016874
AF-A0A0U1DR22-F1-model_v4 Bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 0.9871 142 430 GO:0000820
GO:0005524
GO:0005829
GO:0008882
AF-X8FDX4-F1-model_v4 deleted 0.9866 639 983
AF-A0A656KYH5-F1-model_v4 deleted 0.9847 646 983
AF-A0A2S8M2M4-F1-model_v4 deleted 0.9844 1 115

Feature Viewer

pLDDT pTM Quality
89.32 0.65 Medium
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Predicted Structure (AlphaFold2)

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