F364530

General Info

Members Datasets Scaffolds Average Seq Length
254 187 250 266

Family's Representative Sequence

Representative Sequence 3300001990|JGI24737J22298_10010515|JGI24737J22298_100105152
Length 277
Sequence VSDALIKVGAWALEGPIWLIGCGNMAGAMLRRWLDCGLNPREVTVIRQSGAPVADGVTVLTALPPDGPVPALVMLGVKPQMLDSVAPDLAPLLSEQTLLVSILAGVELAALRRRFSMPHTIVRAMPNTPVAVGQGVVALASDSADQGPRDRVEALMQPLGLVEWVDEELFDVATALAGSGPAFLFRFIDALAEAGTDAGLPADQAARFALAMVQGSATLAANADESPRALADRVASPGGSTRRGLDVLDEDGGLNPLIRNTLMAAILRNREMADAAR

Samples

Sample ID Description Type Environment
1 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
2 2946787523 Sphingomonas faeni W4I17 Isolate Rhizosphere
3 2990265787 Sphingomonas sp. SORGH_AS802 Isolate Aerial Root
4 2993693658 Sphingomonas sp. SORGH_AS438 Isolate Aerial Root
5 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
6 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
7 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
8 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
9 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
10 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
11 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
12 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
13 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
14 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
15 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
16 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
17 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
18 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
19 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
20 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
21 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
22 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
23 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
24 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
25 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
26 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
27 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
28 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
29 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
30 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
31 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
40 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
61 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
62 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
63 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
65 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
66 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
67 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
70 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
72 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
74 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
107 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
108 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
109 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
110 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
111 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
112 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
113 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
114 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
115 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
116 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
117 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
118 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
119 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
120 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
121 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
122 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
123 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
124 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
125 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
126 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
127 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
128 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
129 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
130 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
131 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
132 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
133 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
134 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
135 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
136 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
137 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
138 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
139 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
140 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
141 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
142 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
143 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
144 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
145 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
146 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
147 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
148 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
149 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
150 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
151 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
152 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
153 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
154 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
155 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
156 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
157 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
158 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
159 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
160 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
161 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
162 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
163 3300049517 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control Metagenome Rhizosphere
164 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
166 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
167 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
168 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
169 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
170 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
171 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
172 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
173 3300049777 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_A_5_control Metagenome Rhizosphere
174 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
175 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
176 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
177 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
178 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
179 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
180 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
181 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
182 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
183 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
184 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
185 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
186 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
187 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.43
Metatranscriptomes 0
Isolates 1.57

Biome Distribution

Category Percentage (%)
Aerial Root 0.79
Bulb 0
Endosphere 16.14
Nodule 0
Rhizoplane 2.36
Rhizosphere 70.08
Stem 0
Stem Tuber 0
Unclassified 10.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10010653 3300001989 Bacteria 3410
2 JGI24739J22299_10012450 3300001989 Bacteria 3124
3 JGI24737J22298_10010515 3300001990 Bacteria 3053
4 JGI24735J21928_10006400 3300002067 Bacteria 3876
5 JGI24735J21928_10029255 3300002067 Bacteria 1641
6 JGI25150J39212_1000362 3300002774 Bacteria 22281
7 JGI25151J46595_10025747 3300003187 Bacteria 2387
8 JGI25165J46597_1000039 3300003214 Bacteria 281327
9 JGI25165J46597_1000094 3300003214 Bacteria 164674
10 JGI25153J46596_10000196 3300003215 Bacteria 57182
11 rootH1_10046038 3300003316 Bacteria 1368
12 rootL2_10027470 3300003322 Bacteria 1186
13 Ga0055542_1002618 3300003762 Bacteria 5679
14 Ga0055526_1012875 3300003771 Bacteria 3597
15 Ga0055537_1001168 3300003773 Bacteria 11221
16 Ga0055540_1007771 3300003792 Bacteria 3981
17 Ga0070658_10000106 3300005327 Bacteria 74827
18 Ga0070658_10026121 3300005327 Bacteria 4685
19 Ga0070658_10255233 3300005327 Bacteria 1488
20 Ga0070676_10000539 3300005328 Bacteria 18309
21 Ga0068869_100000709 3300005334 Bacteria 18912
22 Ga0068868_100000016 3300005338 Bacteria 102357
23 Ga0070660_100012845 3300005339 Bacteria 5989
24 Ga0070660_100024388 3300005339 Bacteria 4485
25 Ga0070668_100018502 3300005347 Bacteria 5231
26 Ga0070675_100006402 3300005354 Bacteria 9037
27 Ga0070675_100416179 3300005354 Bacteria 1201
28 Ga0070671_100036117 3300005355 Bacteria 4097
29 Ga0070671_100045676 3300005355 Bacteria 3642
30 Ga0070673_100000017 3300005364 Bacteria 112829
31 Ga0070659_100214533 3300005366 Bacteria 1587
32 Ga0070659_100604359 3300005366 Bacteria 943
33 Ga0070663_100000796 3300005455 Bacteria 17138
34 Ga0070678_100006441 3300005456 Bacteria 6892
35 Ga0070662_100020694 3300005457 Bacteria 4485
36 Ga0070662_100030726 3300005457 Bacteria 3763
37 Ga0068867_100000013 3300005459 Bacteria 112835
38 Ga0068853_100018243 3300005539 Bacteria 5805
39 Ga0068853_100041523 3300005539 Bacteria 3930
40 Ga0068853_100088760 3300005539 Bacteria 2715
41 Ga0068853_100143594 3300005539 Bacteria 2144
42 Ga0070672_100109505 3300005543 Bacteria 2250
43 Ga0070672_100122896 3300005543 Bacteria 2127
44 Ga0068855_100001357 3300005563 Bacteria 30331
45 Ga0068855_100078215 3300005563 Bacteria 3838
46 Ga0068857_100031947 3300005577 Bacteria 4653
47 Ga0068857_100323206 3300005577 Bacteria 1425
48 Ga0068854_100004495 3300005578 Bacteria 8794
49 Ga0068854_100233965 3300005578 Bacteria 1460
50 Ga0068852_100516088 3300005616 Bacteria 1192
51 Ga0068859_100398005 3300005617 Bacteria 1473
52 Ga0068861_100500836 3300005719 Bacteria 1098
53 Ga0068851_10105220 3300005834 Bacteria 1501
54 Ga0068858_100000161 3300005842 Bacteria 71347
55 Ga0068865_100000007 3300006881 Bacteria 185316
56 Ga0097620_100397949 3300006931 Bacteria 1473
57 Ga0105240_10038107 3300009093 Bacteria 6170
58 Ga0105245_10001117 3300009098 Bacteria 24272
59 Ga0105243_10000118 3300009148 Bacteria 91438
60 Ga0105243_10053607 3300009148 Bacteria 3199
61 Ga0105242_10000196 3300009176 Bacteria 46996
62 Ga0105238_10008057 3300009551 Bacteria 10538
63 Ga0105249_10030391 3300009553 Bacteria 4883
64 Ga0105239_10081502 3300010375 Bacteria 3562
65 Ga0105239_10090837 3300010375 Bacteria 3369
66 Ga0105246_10000313 3300011119 Bacteria 25771
67 Ga0157370_10000692 3300013104 Bacteria 42084
68 Ga0157369_10052395 3300013105 Bacteria 4415
69 Ga0157374_10000189 3300013296 Bacteria 57356
70 Ga0157374_10145284 3300013296 Bacteria 2304
71 Ga0157378_10000264 3300013297 Bacteria 51230
72 Ga0157378_10111970 3300013297 Bacteria 2503
73 Ga0163162_10194152 3300013306 Bacteria 2158
74 Ga0163162_10541862 3300013306 Bacteria 1292
75 Ga0157372_10095350 3300013307 Bacteria 3390
76 Ga0157372_10142449 3300013307 Bacteria 2763
77 Ga0157372_10227750 3300013307 Bacteria 2161
78 Ga0157375_10000436 3300013308 Bacteria 37738
79 Ga0157376_10000081 3300014969 Bacteria 72584
80 Ga0207427_100465 3300025231 Bacteria 22311
81 Ga0207425_1000146 3300025245 Bacteria 60712
82 Ga0209026_1023235 3300025250 Bacteria 945
83 Ga0209148_1000074 3300025254 Bacteria 314356
84 Ga0209148_1002092 3300025254 Bacteria 7573
85 Ga0209129_1000888 3300025258 Bacteria 18389
86 Ga0209233_1000003 3300025261 Bacteria 1607366
87 Ga0209233_1000052 3300025261 Bacteria 445813
88 Ga0209565_1000059 3300025263 Bacteria 189658
89 Ga0209455_1000852 3300025272 Bacteria 16300
90 Ga0209676_1004616 3300025292 Bacteria 7588
91 Ga0209676_1058662 3300025292 Bacteria 970
92 Ga0209025_1000431 3300025294 Bacteria 82934
93 Ga0209564_1000437 3300025295 Bacteria 72058
94 Ga0209564_1018126 3300025295 Bacteria 2702
95 Ga0209758_1000002 3300025297 Bacteria 1400310
96 Ga0209050_1000005 3300025298 Bacteria 1557793
97 Ga0207426_1008785 3300025302 Bacteria 4046
98 Ga0209257_1001283 3300025304 Bacteria 30714
99 Ga0209257_1003081 3300025304 Bacteria 15009
100 Ga0207647_10002587 3300025904 Bacteria 13693
101 Ga0207647_10012237 3300025904 Bacteria 5980
102 Ga0207647_10021047 3300025904 Bacteria 4360
103 Ga0207647_10082247 3300025904 Bacteria 1929
104 Ga0207645_10009653 3300025907 Bacteria 6666
105 Ga0207705_10000044 3300025909 Bacteria 180886
106 Ga0207705_10000078 3300025909 Bacteria 120247
107 Ga0207705_10009992 3300025909 Bacteria 6909
108 Ga0207695_10027264 3300025913 Bacteria 6364
109 Ga0207657_10001650 3300025919 Bacteria 24065
110 Ga0207657_10002766 3300025919 Bacteria 18890
111 Ga0207649_10169983 3300025920 Bacteria 1517
112 Ga0207694_10009692 3300025924 Bacteria 7262
113 Ga0207659_10010728 3300025926 Bacteria 5762
114 Ga0207659_10318292 3300025926 Bacteria 1283
115 Ga0207687_10001736 3300025927 Bacteria 15019
116 Ga0207644_10014430 3300025931 Bacteria 5284
117 Ga0207644_10043284 3300025931 Bacteria 3194
118 Ga0207690_10011899 3300025932 Bacteria 5203
119 Ga0207690_10031506 3300025932 Bacteria 3394
120 Ga0207706_10030960 3300025933 Bacteria 4770
121 Ga0207706_10196196 3300025933 Bacteria 1771
122 Ga0207686_10000260 3300025934 Bacteria 39872
123 Ga0207709_10000156 3300025935 Bacteria 93099
124 Ga0207709_10101396 3300025935 Bacteria 1904
125 Ga0207704_10000017 3300025938 Bacteria 154190
126 Ga0207691_10050421 3300025940 Bacteria 3811
127 Ga0207691_10186972 3300025940 Bacteria 1808
128 Ga0207689_10001764 3300025942 Bacteria 20406
129 Ga0207667_10000071 3300025949 Bacteria 178355
130 Ga0207667_10395305 3300025949 Bacteria 1408
131 Ga0207667_10824448 3300025949 Bacteria 923
132 Ga0207651_10000011 3300025960 Bacteria 191950
133 Ga0207640_10000067 3300025981 Bacteria 85026
134 Ga0207640_10031253 3300025981 Bacteria 3288
135 Ga0207677_10000173 3300026023 Bacteria 50916
136 Ga0207703_10000491 3300026035 Bacteria 41100
137 Ga0207639_10014604 3300026041 Bacteria 5530
138 Ga0207639_10094885 3300026041 Bacteria 2396
139 Ga0207678_10006666 3300026067 Bacteria 10234
140 Ga0207702_10433140 3300026078 Bacteria 1273
141 Ga0207648_10000045 3300026089 Bacteria 111963
142 Ga0207674_10111235 3300026116 Bacteria 2713
143 Ga0207674_10454883 3300026116 Bacteria 1237
144 Ga0207675_100396777 3300026118 Bacteria 1359
145 Ga0207683_10002781 3300026121 Bacteria 15279
146 Ga0207698_10092669 3300026142 Bacteria 2478
147 Ga0207698_10189598 3300026142 Bacteria 1830
148 Ga0268266_10098665 3300028379 Bacteria 2571
149 Ga0307408_100011987 3300031548 Bacteria 5738
150 Ga0307508_10002020 3300031616 Bacteria 22030
151 Ga0307406_10069523 3300031901 Bacteria 2302
152 Ga0307412_10090879 3300031911 Bacteria 2135
153 Ga0307416_100031330 3300032002 Bacteria 4002
154 Ga0307414_10434159 3300032004 Bacteria 1148
155 Ga0307510_10160795 3300033180 Bacteria 1843
156 Ga0395899_0003161 3300037312 Bacteria 13080
157 Ga0395900_0069180 3300037418 Bacteria 3628
158 Ga0395900_0564789 3300037418 Bacteria 1081
159 Ga0395905_0061106 3300037471 Bacteria 3524
160 Ga0395905_0157194 3300037471 Bacteria 2138
161 Ga0395901_0033334 3300038443 Bacteria 5317
162 Ga0451806_197249 3300041462 Bacteria 5054
163 Ga0451807_0143528 3300041486 Bacteria 1849
164 Ga0451853_0894109 3300041512 Bacteria 1553
165 Ga0439448_0000316 3300042005 Bacteria 10706
166 Ga0439448_0035064 3300042005 Bacteria 1605
167 Ga0439455_0006845 3300042012 Bacteria 2386
168 Ga0439455_0070155 3300042012 Bacteria 940
169 Ga0439458_0005500 3300042157 Bacteria 2848
170 Ga0439458_0020119 3300042157 Bacteria 1540
171 Ga0466966_0015382 3300044684 Bacteria 5059
172 Ga0466961_0006506 3300044693 Bacteria 7427
173 Ga0466963_0152992 3300044694 Bacteria 1602
174 Ga0466964_0005354 3300044706 Bacteria 4767
175 Ga0466971_0003563 3300044719 Bacteria 6652
176 Ga0466971_0047585 3300044719 Bacteria 1928
177 Ga0466970_0001267 3300044765 Bacteria 12216
178 Ga0466957_0018982 3300044842 Bacteria 4042
179 Ga0466957_0077832 3300044842 Bacteria 2061
180 Ga0466960_0009650 3300044901 Bacteria 3986
181 Ga0466959_0001787 3300045049 Bacteria 13436
182 Ga0466958_0024565 3300045836 Bacteria 3547
183 Ga0466967_0073948 3300045976 Bacteria 3059
184 Ga0495638_0041745 3300046460 Bacteria 2900
185 Ga0495650_0063165 3300046471 Bacteria 1478
186 Ga0495583_0000201 3300046506 Bacteria 100380
187 Ga0495606_0000443 3300046507 Bacteria 67796
188 Ga0495606_0073697 3300046507 Bacteria 2141
189 Ga0495610_0081512 3300046512 Bacteria 1485
190 Ga0495654_0015546 3300046530 Bacteria 4040
191 Ga0495625_0000478 3300046660 Bacteria 60078
192 Ga0495661_0031746 3300046665 Bacteria 3346
193 Ga0495649_0181669 3300046694 Bacteria 1097
194 Ga0495687_057737 3300047443 Bacteria 1613
195 Ga0495673_0039112 3300047469 Bacteria 2153
196 Ga0495686_0000072 3300047472 Bacteria 216371
197 Ga0495686_0000824 3300047472 Bacteria 39973
198 Ga0496102_0000529 3300048905 Bacteria 41357
199 Ga0496103_0000358 3300048906 Bacteria 41329
200 Ga0496111_0035669 3300048914 Bacteria 3556
201 Ga0496115_0000284 3300048918 Bacteria 43773
202 Ga0496116_0000750 3300048919 Bacteria 41221
203 Ga0496117_0001078 3300048920 Bacteria 41357
204 Ga0496117_0030228 3300048920 Bacteria 4160
205 Ga0496118_0001124 3300048921 Bacteria 41357
206 Ga0496118_0038039 3300048921 Bacteria 3862
207 Ga0496118_0150752 3300048921 Bacteria 1456
208 Ga0496119_0012941 3300048922 Bacteria 6712
209 Ga0496119_0039040 3300048922 Bacteria 3056
210 Ga0496120_0041745 3300048923 Bacteria 2684
211 Ga0496121_0119979 3300048924 Bacteria 1988
212 Ga0496122_0000579 3300048925 Bacteria 75073
213 Ga0496122_0014706 3300048925 Bacteria 7546
214 Ga0496122_0118693 3300048925 Bacteria 1713
215 Ga0496123_0010591 3300048926 Bacteria 8117
216 Ga0496123_0027270 3300048926 Bacteria 4257
217 Ga0496123_0106162 3300048926 Bacteria 1618
218 Ga0496124_0001157 3300048927 Bacteria 41357
219 Ga0496124_0028161 3300048927 Bacteria 5029
220 Ga0496124_0211493 3300048927 Bacteria 1467
221 Ga0496125_0004105 3300048928 Bacteria 17024
222 Ga0496126_0052606 3300048929 Bacteria 3700
223 Ga0495682_0012337 3300049460 Bacteria 3277
224 Ga0501292_000029 3300049515 Bacteria 40489
225 Ga0501294_000615 3300049517 Bacteria 4066
226 Ga0501047_0266425 3300049581 Bacteria 1560
227 Ga0501223_001248 3300049663 Bacteria 5934
228 Ga0501224_000733 3300049664 Bacteria 4118
229 Ga0501227_003390 3300049665 Bacteria 3454
230 Ga0501235_001626 3300049669 Bacteria 4827
231 Ga0501261_000098 3300049690 Bacteria 12998
232 Ga0501225_0014404 3300049705 Bacteria 2208
233 Ga0501279_000002 3300049775 Bacteria 205937
234 Ga0501280_000003 3300049776 Bacteria 93762
235 Ga0501281_00146 3300049777 Bacteria 8227
236 Ga0501282_000510 3300049778 Bacteria 4595
237 Ga0500643_000065 3300053087 Bacteria 119995
238 Ga0500641_0015922 3300053096 Bacteria 2796
239 Ga0500555_000234 3300053103 Bacteria 24803
240 Ga0500592_002917 3300053116 Bacteria 2744
241 Ga0500658_0114026 3300053134 Bacteria 1192
242 Ga0500559_0078292 3300053136 Bacteria 1499
243 Ga0500568_0015889 3300053139 Bacteria 3359
244 Ga0500577_0136452 3300053142 Bacteria 1032
245 Ga0500604_0059317 3300053151 Bacteria 1198
246 Ga0500616_0003840 3300053153 Bacteria 11106
247 Ga0500616_0034157 3300053153 Bacteria 2772
248 Ga0500627_0000329 3300053158 Bacteria 12969
249 Ga0500596_004769 3300053735 Bacteria 2453
250 Ga0466962_0020081 3300061719 Bacteria 3211

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300028379 Ga0268266_10098665 Ga0268266_100986652 237
2 3300005327 Ga0070658_10255233 Ga0070658_102552332 246
3 3300005347 Ga0070668_100018502 Ga0070668_1000185024 246
4 3300037471 Ga0395905_0061106 Ga0395905_0061106_2744_3505 246
5 3300046530 Ga0495654_0015546 Ga0495654_0015546_2085_2903 247
6 3300053116 Ga0500592_002917 Ga0500592_002917_726_1544 247
7 3300053158 Ga0500627_0000329 Ga0500627_0000329_10897_11715 247
8 3300005617 Ga0068859_100398005 Ga0068859_1003980051 248
9 3300006931 Ga0097620_100397949 Ga0097620_1003979492 248
10 3300053134 Ga0500658_0114026 Ga0500658_0114026_73_891 248
11 3300053151 Ga0500604_0059317 Ga0500604_0059317_224_1042 248
12 3300049515 Ga0501292_000029 Ga0501292_000029_9802_10620 249
13 3300049517 Ga0501294_000615 Ga0501294_000615_2644_3462 249
14 3300049665 Ga0501227_003390 Ga0501227_003390_2040_2858 249
15 3300049669 Ga0501235_001626 Ga0501235_001626_2786_3604 249
16 3300049690 Ga0501261_000098 Ga0501261_000098_4990_5808 249
17 3300049775 Ga0501279_000002 Ga0501279_000002_195583_196401 249
18 3300049778 Ga0501282_000510 Ga0501282_000510_3067_3885 249
19 3300003771 Ga0055526_1012875 Ga0055526_10128754 250
20 3300025295 Ga0209564_1000437 Ga0209564_10004373 250
21 3300053087 Ga0500643_000065 Ga0500643_000065_99468_100286 250
22 3300048918 Ga0496115_0000284 Ga0496115_0000284_1713_2501 251
23 3300049777 Ga0501281_00146 Ga0501281_00146_584_1402 251
24 3300053136 Ga0500559_0078292 Ga0500559_0078292_664_1425 251
25 3300002774 JGI25150J39212_1000362 JGI25150J39212_100036211 252
26 3300003187 JGI25151J46595_10025747 JGI25151J46595_100257472 252
27 3300003215 JGI25153J46596_10000196 JGI25153J46596_1000019650 252
28 3300003773 Ga0055537_1001168 Ga0055537_10011682 252
29 3300003792 Ga0055540_1007771 Ga0055540_10077716 252
30 3300025245 Ga0207425_1000146 Ga0207425_100014616 252
31 3300025258 Ga0209129_1000888 Ga0209129_10008884 252
32 3300025263 Ga0209565_1000059 Ga0209565_1000059106 252
33 3300025292 Ga0209676_1004616 Ga0209676_10046167 252
34 3300025292 Ga0209676_1058662 Ga0209676_10586621 252
35 3300025294 Ga0209025_1000431 Ga0209025_100043164 252
36 3300025295 Ga0209564_1018126 Ga0209564_10181263 252
37 3300025297 Ga0209758_1000002 Ga0209758_10000021393 252
38 3300025298 Ga0209050_1000005 Ga0209050_1000005312 252
39 3300025304 Ga0209257_1001283 Ga0209257_10012832 252
40 3300025304 Ga0209257_1003081 Ga0209257_10030812 252
41 3300042012 Ga0439455_0070155 Ga0439455_0070155_17_778 253
42 3300042157 Ga0439458_0020119 Ga0439458_0020119_13_774 253
43 3300048925 Ga0496122_0014706 Ga0496122_0014706_6245_7006 253
44 3300048926 Ga0496123_0010591 Ga0496123_0010591_4268_5029 253
45 3300053142 Ga0500577_0136452 Ga0500577_0136452_30_791 253
46 3300003322 rootL2_10027470 rootL2_100274701 255
47 3300048922 Ga0496119_0039040 Ga0496119_0039040_2177_2980 255
48 3300005354 Ga0070675_100416179 Ga0070675_1004161792 256
49 3300005355 Ga0070671_100036117 Ga0070671_1000361176 256
50 3300005616 Ga0068852_100516088 Ga0068852_1005160882 256
51 3300025926 Ga0207659_10318292 Ga0207659_103182922 256
52 3300025931 Ga0207644_10014430 Ga0207644_100144302 256
53 3300026142 Ga0207698_10092669 Ga0207698_100926692 256
54 3300025933 Ga0207706_10196196 Ga0207706_101961962 257
55 3300048921 Ga0496118_0038039 Ga0496118_0038039_2393_3205 258
56 3300048923 Ga0496120_0041745 Ga0496120_0041745_1013_1825 258
57 3300048928 Ga0496125_0004105 Ga0496125_0004105_12699_13511 258
58 3300046512 Ga0495610_0081512 Ga0495610_0081512_468_1274 259
59 3300025302 Ga0207426_1008785 Ga0207426_10087852 261
60 3300047472 Ga0495686_0000824 Ga0495686_0000824_25656_26468 261
61 3300037418 Ga0395900_0564789 Ga0395900_0564789_208_1020 263
62 3300038443 Ga0395901_0033334 Ga0395901_0033334_2922_3734 263
63 3300049663 Ga0501223_001248 Ga0501223_001248_1136_1954 263
64 3300049664 Ga0501224_000733 Ga0501224_000733_1987_2805 263
65 3300049705 Ga0501225_0014404 Ga0501225_0014404_624_1442 263
66 3300049776 Ga0501280_000003 Ga0501280_000003_21022_21840 263
67 iso_pu_bacteria 2830075706 2830077191 263
68 3300003214 JGI25165J46597_1000039 JGI25165J46597_10000395 264
69 3300005842 Ga0068858_100000161 Ga0068858_10000016124 264
70 3300009148 Ga0105243_10053607 Ga0105243_100536075 264
71 3300013297 Ga0157378_10111970 Ga0157378_101119704 264
72 3300025250 Ga0209026_1023235 Ga0209026_10232351 264
73 3300025261 Ga0209233_1000052 Ga0209233_1000052161 264
74 3300025935 Ga0207709_10101396 Ga0207709_101013962 264
75 3300026035 Ga0207703_10000491 Ga0207703_1000049118 264
76 3300031616 Ga0307508_10002020 Ga0307508_1000202018 264
77 3300046660 Ga0495625_0000478 Ga0495625_0000478_28692_29492 264
78 3300053096 Ga0500641_0015922 Ga0500641_0015922_236_1036 264
79 3300053139 Ga0500568_0015889 Ga0500568_0015889_474_1274 264
80 3300005563 Ga0068855_100001357 Ga0068855_10000135722 265
81 3300005578 Ga0068854_100233965 Ga0068854_1002339652 265
82 3300025949 Ga0207667_10000071 Ga0207667_1000007137 265
83 3300025981 Ga0207640_10031253 Ga0207640_100312535 265
84 3300026118 Ga0207675_100396777 Ga0207675_1003967772 265
85 3300013306 Ga0163162_10194152 Ga0163162_101941522 266
86 3300049581 Ga0501047_0266425 Ga0501047_0266425_34_843 266
87 3300053735 Ga0500596_004769 Ga0500596_004769_282_1088 266
88 iso_pu_bacteria 2946787523 2946788125 266
89 iso_pu_bacteria 2990265787 2990268620 266
90 iso_pu_bacteria 2993693658 2993694674 266
91 3300005327 Ga0070658_10000106 Ga0070658_1000010632 267
92 3300005339 Ga0070660_100012845 Ga0070660_1000128452 267
93 3300025909 Ga0207705_10000078 Ga0207705_10000078100 267
94 3300025919 Ga0207657_10001650 Ga0207657_100016502 267
95 3300025949 Ga0207667_10824448 Ga0207667_108244481 267
96 3300047469 Ga0495673_0039112 Ga0495673_0039112_1042_1848 268
97 3300048925 Ga0496122_0118693 Ga0496122_0118693_699_1505 268
98 3300048926 Ga0496123_0106162 Ga0496123_0106162_356_1162 268
99 3300048927 Ga0496124_0211493 Ga0496124_0211493_299_1105 268
100 3300053153 Ga0500616_0003840 Ga0500616_0003840_5417_6232 268
101 3300025920 Ga0207649_10169983 Ga0207649_101699832 269
102 3300031548 Ga0307408_100011987 Ga0307408_1000119875 269
103 3300031901 Ga0307406_10069523 Ga0307406_100695234 269
104 3300031911 Ga0307412_10090879 Ga0307412_100908791 269
105 3300032002 Ga0307416_100031330 Ga0307416_1000313301 269
106 3300032004 Ga0307414_10434159 Ga0307414_104341591 269
107 3300001989 JGI24739J22299_10010653 JGI24739J22299_100106535 270
108 3300001989 JGI24739J22299_10012450 JGI24739J22299_100124502 270
109 3300001990 JGI24737J22298_10010515 JGI24737J22298_100105152 270
110 3300002067 JGI24735J21928_10006400 JGI24735J21928_100064002 270
111 3300002067 JGI24735J21928_10029255 JGI24735J21928_100292553 270
112 3300003214 JGI25165J46597_1000094 JGI25165J46597_1000094143 270
113 3300003316 rootH1_10046038 rootH1_100460382 270
114 3300003762 Ga0055542_1002618 Ga0055542_10026187 270
115 3300005327 Ga0070658_10026121 Ga0070658_100261211 270
116 3300005328 Ga0070676_10000539 Ga0070676_100005392 270
117 3300005334 Ga0068869_100000709 Ga0068869_1000007092 270
118 3300005338 Ga0068868_100000016 Ga0068868_10000001659 270
119 3300005339 Ga0070660_100024388 Ga0070660_1000243883 270
120 3300005354 Ga0070675_100006402 Ga0070675_1000064029 270
121 3300005355 Ga0070671_100045676 Ga0070671_1000456762 270
122 3300005364 Ga0070673_100000017 Ga0070673_10000001797 270
123 3300005366 Ga0070659_100214533 Ga0070659_1002145332 270
124 3300005366 Ga0070659_100604359 Ga0070659_1006043591 270
125 3300005455 Ga0070663_100000796 Ga0070663_1000007966 270
126 3300005456 Ga0070678_100006441 Ga0070678_1000064416 270
127 3300005457 Ga0070662_100020694 Ga0070662_1000206944 270
128 3300005457 Ga0070662_100030726 Ga0070662_1000307262 270
129 3300005459 Ga0068867_100000013 Ga0068867_10000001397 270
130 3300005539 Ga0068853_100018243 Ga0068853_1000182436 270
131 3300005539 Ga0068853_100041523 Ga0068853_1000415234 270
132 3300005539 Ga0068853_100088760 Ga0068853_1000887602 270
133 3300005539 Ga0068853_100143594 Ga0068853_1001435942 270
134 3300005543 Ga0070672_100109505 Ga0070672_1001095053 270
135 3300005543 Ga0070672_100122896 Ga0070672_1001228962 270
136 3300005563 Ga0068855_100078215 Ga0068855_1000782153 270
137 3300005577 Ga0068857_100031947 Ga0068857_1000319475 270
138 3300005577 Ga0068857_100323206 Ga0068857_1003232062 270
139 3300005578 Ga0068854_100004495 Ga0068854_10000449512 270
140 3300005719 Ga0068861_100500836 Ga0068861_1005008362 270
141 3300005834 Ga0068851_10105220 Ga0068851_101052202 270
142 3300006881 Ga0068865_100000007 Ga0068865_100000007123 270
143 3300009093 Ga0105240_10038107 Ga0105240_100381074 270
144 3300009098 Ga0105245_10001117 Ga0105245_100011179 270
145 3300009148 Ga0105243_10000118 Ga0105243_100001188 270
146 3300009176 Ga0105242_10000196 Ga0105242_1000019626 270
147 3300009551 Ga0105238_10008057 Ga0105238_100080573 270
148 3300009553 Ga0105249_10030391 Ga0105249_100303913 270
149 3300010375 Ga0105239_10081502 Ga0105239_100815025 270
150 3300010375 Ga0105239_10090837 Ga0105239_100908375 270
151 3300011119 Ga0105246_10000313 Ga0105246_1000031314 270
152 3300013104 Ga0157370_10000692 Ga0157370_1000069222 270
153 3300013105 Ga0157369_10052395 Ga0157369_100523956 270
154 3300013296 Ga0157374_10000189 Ga0157374_1000018957 270
155 3300013296 Ga0157374_10145284 Ga0157374_101452843 270
156 3300013297 Ga0157378_10000264 Ga0157378_1000026452 270
157 3300013306 Ga0163162_10541862 Ga0163162_105418622 270
158 3300013307 Ga0157372_10095350 Ga0157372_100953505 270
159 3300013307 Ga0157372_10142449 Ga0157372_101424492 270
160 3300013307 Ga0157372_10227750 Ga0157372_102277501 270
161 3300013308 Ga0157375_10000436 Ga0157375_100004368 270
162 3300014969 Ga0157376_10000081 Ga0157376_1000008126 270
163 3300025231 Ga0207427_100465 Ga0207427_10046515 270
164 3300025254 Ga0209148_1000074 Ga0209148_1000074112 270
165 3300025254 Ga0209148_1002092 Ga0209148_10020923 270
166 3300025261 Ga0209233_1000003 Ga0209233_10000031422 270
167 3300025272 Ga0209455_1000852 Ga0209455_100085222 270
168 3300025904 Ga0207647_10002587 Ga0207647_1000258723 270
169 3300025904 Ga0207647_10012237 Ga0207647_100122377 270
170 3300025904 Ga0207647_10021047 Ga0207647_100210475 270
171 3300025904 Ga0207647_10082247 Ga0207647_100822472 270
172 3300025907 Ga0207645_10009653 Ga0207645_100096534 270
173 3300025909 Ga0207705_10000044 Ga0207705_100000441 270
174 3300025909 Ga0207705_10009992 Ga0207705_100099924 270
175 3300025913 Ga0207695_10027264 Ga0207695_100272645 270
176 3300025919 Ga0207657_10002766 Ga0207657_1000276627 270
177 3300025924 Ga0207694_10009692 Ga0207694_100096927 270
178 3300025926 Ga0207659_10010728 Ga0207659_100107282 270
179 3300025927 Ga0207687_10001736 Ga0207687_100017368 270
180 3300025931 Ga0207644_10043284 Ga0207644_100432842 270
181 3300025932 Ga0207690_10011899 Ga0207690_100118995 270
182 3300025932 Ga0207690_10031506 Ga0207690_100315063 270
183 3300025933 Ga0207706_10030960 Ga0207706_100309604 270
184 3300025934 Ga0207686_10000260 Ga0207686_1000026025 270
185 3300025935 Ga0207709_10000156 Ga0207709_1000015629 270
186 3300025938 Ga0207704_10000017 Ga0207704_1000001767 270
187 3300025940 Ga0207691_10050421 Ga0207691_100504214 270
188 3300025940 Ga0207691_10186972 Ga0207691_101869722 270
189 3300025942 Ga0207689_10001764 Ga0207689_100017644 270
190 3300025949 Ga0207667_10395305 Ga0207667_103953052 270
191 3300025960 Ga0207651_10000011 Ga0207651_1000001169 270
192 3300025981 Ga0207640_10000067 Ga0207640_1000006760 270
193 3300026023 Ga0207677_10000173 Ga0207677_1000017336 270
194 3300026041 Ga0207639_10014604 Ga0207639_100146042 270
195 3300026041 Ga0207639_10094885 Ga0207639_100948852 270
196 3300026067 Ga0207678_10006666 Ga0207678_100066666 270
197 3300026078 Ga0207702_10433140 Ga0207702_104331402 270
198 3300026089 Ga0207648_10000045 Ga0207648_1000004525 270
199 3300026116 Ga0207674_10111235 Ga0207674_101112352 270
200 3300026116 Ga0207674_10454883 Ga0207674_104548831 270
201 3300026121 Ga0207683_10002781 Ga0207683_1000278124 270
202 3300026142 Ga0207698_10189598 Ga0207698_101895982 270
203 3300033180 Ga0307510_10160795 Ga0307510_101607952 270
204 3300037312 Ga0395899_0003161 Ga0395899_0003161_5765_6580 270
205 3300037418 Ga0395900_0069180 Ga0395900_0069180_2654_3469 270
206 3300037471 Ga0395905_0157194 Ga0395905_0157194_171_983 270
207 3300041462 Ga0451806_197249 Ga0451806_197249_1190_2002 270
208 3300041486 Ga0451807_0143528 Ga0451807_0143528_323_1135 270
209 3300041512 Ga0451853_0894109 Ga0451853_0894109_670_1482 270
210 3300042005 Ga0439448_0000316 Ga0439448_0000316_1720_2532 270
211 3300042005 Ga0439448_0035064 Ga0439448_0035064_696_1508 270
212 3300042012 Ga0439455_0006845 Ga0439455_0006845_832_1644 270
213 3300042157 Ga0439458_0005500 Ga0439458_0005500_465_1277 270
214 3300044684 Ga0466966_0015382 Ga0466966_0015382_901_1713 270
215 3300044693 Ga0466961_0006506 Ga0466961_0006506_2909_3721 270
216 3300044694 Ga0466963_0152992 Ga0466963_0152992_374_1186 270
217 3300044706 Ga0466964_0005354 Ga0466964_0005354_2069_2881 270
218 3300044719 Ga0466971_0003563 Ga0466971_0003563_5414_6226 270
219 3300044719 Ga0466971_0047585 Ga0466971_0047585_1064_1876 270
220 3300044765 Ga0466970_0001267 Ga0466970_0001267_4996_5808 270
221 3300044842 Ga0466957_0018982 Ga0466957_0018982_1818_2636 270
222 3300044842 Ga0466957_0077832 Ga0466957_0077832_334_1146 270
223 3300044901 Ga0466960_0009650 Ga0466960_0009650_1562_2374 270
224 3300045049 Ga0466959_0001787 Ga0466959_0001787_9588_10400 270
225 3300045836 Ga0466958_0024565 Ga0466958_0024565_1182_1994 270
226 3300045976 Ga0466967_0073948 Ga0466967_0073948_1804_2616 270
227 3300046460 Ga0495638_0041745 Ga0495638_0041745_461_1273 270
228 3300046471 Ga0495650_0063165 Ga0495650_0063165_172_984 270
229 3300046506 Ga0495583_0000201 Ga0495583_0000201_24928_25740 270
230 3300046507 Ga0495606_0000443 Ga0495606_0000443_38439_39251 270
231 3300046507 Ga0495606_0073697 Ga0495606_0073697_467_1279 270
232 3300046665 Ga0495661_0031746 Ga0495661_0031746_438_1250 270
233 3300046694 Ga0495649_0181669 Ga0495649_0181669_104_916 270
234 3300047443 Ga0495687_057737 Ga0495687_057737_342_1154 270
235 3300047472 Ga0495686_0000072 Ga0495686_0000072_202988_203800 270
236 3300048905 Ga0496102_0000529 Ga0496102_0000529_36818_37636 270
237 3300048906 Ga0496103_0000358 Ga0496103_0000358_3722_4540 270
238 3300048914 Ga0496111_0035669 Ga0496111_0035669_1541_2353 270
239 3300048919 Ga0496116_0000750 Ga0496116_0000750_36711_37529 270
240 3300048920 Ga0496117_0001078 Ga0496117_0001078_3722_4540 270
241 3300048920 Ga0496117_0030228 Ga0496117_0030228_262_1074 270
242 3300048921 Ga0496118_0001124 Ga0496118_0001124_36818_37636 270
243 3300048921 Ga0496118_0150752 Ga0496118_0150752_489_1301 270
244 3300048922 Ga0496119_0012941 Ga0496119_0012941_3721_4539 270
245 3300048924 Ga0496121_0119979 Ga0496121_0119979_257_1072 270
246 3300048925 Ga0496122_0000579 Ga0496122_0000579_14694_15506 270
247 3300048926 Ga0496123_0027270 Ga0496123_0027270_2910_3722 270
248 3300048927 Ga0496124_0001157 Ga0496124_0001157_3722_4540 270
249 3300048927 Ga0496124_0028161 Ga0496124_0028161_2303_3115 270
250 3300048929 Ga0496126_0052606 Ga0496126_0052606_547_1359 270
251 3300049460 Ga0495682_0012337 Ga0495682_0012337_1565_2377 270
252 3300053103 Ga0500555_000234 Ga0500555_000234_7277_8089 270
253 3300053153 Ga0500616_0034157 Ga0500616_0034157_238_1050 270
254 3300061719 Ga0466962_0020081 Ga0466962_0020081_407_1219 270

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14748

P5CR_dimer

Pyrroline-5-carboxylate reductase dimerisation

167

272

0.98

PF03807

F420_oxidored

NADP oxidoreductase coenzyme F420-dependent

16

105

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
6lhm-assembly3.cif.gz_C structure of human pycr2 0.9188 65 267
6lhm-assembly2.cif.gz_B structure of human pycr2 0.908 11 267
2rcy-assembly1.cif.gz_D-2 crystal structure of plasmodium falciparum pyrroline carboxylate reductase (mal13p1.284) with nadp bound 0.9009 9 266
5bsh-assembly1.cif.gz_D crystal structure of medicago truncatula (delta)1-pyrroline-5-carboxylate reductase (mtp5cr) in complex with l-proline 0.8964 5 265
5bsh-assembly1.cif.gz_G crystal structure of medicago truncatula (delta)1-pyrroline-5-carboxylate reductase (mtp5cr) in complex with l-proline 0.8957 5 265
ID Description Score Start End Superfamily
2amfD02 Mainly Alpha;Orthogonal Bundle;ProC C-terminal domain-like fold;ProC C-terminal domain-like 0.9597 159 264 1.10.3730.10
2amfA02 Mainly Alpha;Orthogonal Bundle;ProC C-terminal domain-like fold;ProC C-terminal domain-like 0.9586 159 264 1.10.3730.10
2amfE02 Mainly Alpha;Orthogonal Bundle;ProC C-terminal domain-like fold;ProC C-terminal domain-like 0.9571 159 264 1.10.3730.10
2ahrA02 Mainly Alpha;Orthogonal Bundle;ProC C-terminal domain-like fold;ProC C-terminal domain-like 0.9507 159 264 1.10.3730.10
2ahrD02 Mainly Alpha;Orthogonal Bundle;ProC C-terminal domain-like fold;ProC C-terminal domain-like 0.9504 159 264 1.10.3730.10
ID Description Score Start End GO Terms
AF-A0A3B9FFX2-F1-model_v4 Pyrroline-5-carboxylate reductase 0.9746 114 265 GO:0004735
GO:0055129
AF-A0A436E0X8-F1-model_v4 Pyrroline-5-carboxylate reductase 0.9728 122 265 GO:0004735
GO:0055129
AF-A0A7G9SGC3-F1-model_v4 Pyrroline-5-carboxylate reductase (P5C reductase) (P5CR) (EC 1.5.1.2) (PCA reductase) 0.9642 6 269 GO:0004735
GO:0005737
GO:0055129
AF-A0A6G7ZNW8-F1-model_v4 Pyrroline-5-carboxylate reductase (P5C reductase) (P5CR) (EC 1.5.1.2) (PCA reductase) 0.9638 8 270 GO:0004735
GO:0005737
GO:0055129
AF-A0A840ZAS9-F1-model_v4 Pyrroline-5-carboxylate reductase (P5C reductase) (P5CR) (EC 1.5.1.2) (PCA reductase) 0.9625 9 267 GO:0004735
GO:0005737
GO:0055129

Feature Viewer

pLDDT pTM Quality
93.19 0.88 High
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Predicted Structure (AlphaFold2)

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