F363767

General Info

Members Datasets Scaffolds Average Seq Length
253 154 228 421

Family's Representative Sequence

Representative Sequence 3300005329|Ga0070683_100103355|Ga0070683_1001033551
Length 480
Sequence MRNVSIESWDTRPEARPAKDGMVRLCFIVALGIAMWTSRSALAHAQVSSPSRDARPSLNRSTTMTELNTVDAPLAAPAPRTASEDKSIRPFRVSMSDEKLADLRRRILATQWPERETVPDESQGVPLATMQQLARYWATDYDWRKVEAKLNALPQFITTIDGLDIHFIHVRSKHASALPLVINHGWPGSVIEQLKLIGPLTDPTRYGGRAEDAFDVVIPSMPGYGFSGKPTSTGWGPERMGRAWVELMKRLGYTRYVAQGGDWGAFVVDQMGLQAPAGLLAIHTNMPATVPADVDKALLAGGPAPSGLSAEERRAYEQLVRTFKQVDYAKYMAARPQTLYGIADSPVGLAAWLLDHNDADGQPAVAVASALTRKTSATGELTRDEILDNITLYWLTNTGVSASRLYWEYKGGFFNTKGVSIPVAVSVFPSEQYEAPRSWTERAYPKLIYYNKVDKGGHFAAWEQPQLFAAELRAAFKSVR

Samples

Sample ID Description Type Environment
1 2508501050 Microvirga lupini Lut6 Isolate Nodule
2 2509276021 Rhizobium leguminosarum bv. trifolii WSM597 Isolate Nodule
3 2509276033 Rhizobium leguminosarum bv. trifolii WSM2012 Isolate Nodule
4 2513237143 Sinorhizobium meliloti Mlalz-1 Isolate Nodule
5 2515154189 Paraburkholderia nodosa DSM 21604 Isolate Unclassified
6 2599185352 Sinorhizobium sp. NFACC03 Isolate Rhizoplane
7 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
8 2738541296 Paraburkholderia sp. GV073 Isolate Unclassified
9 2738541298 Paraburkholderia sp. GV068 Isolate Unclassified
10 2738541306 Paraburkholderia sp. GV052 Isolate Unclassified
11 2738543002 Paraburkholderia sp. GV072 Isolate Unclassified
12 2738543008 Paraburkholderia sp. GV060 Isolate Unclassified
13 2744054900 Paraburkholderia ginsengiterrae DCY85-1 Isolate Unclassified
14 2744054901 Paraburkholderia ginsengiterrae DCY85 Isolate Unclassified
15 2773857925 Microvirga vignae BR3299 Isolate Unclassified
16 2775506901 Microvirga ossetica V5/3m Isolate Unclassified
17 2839993093 Phyllobacterium endophyticum PEPV15 Isolate Unclassified
18 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
19 2841864319 Rhizobium leguminosarum SEMIA 4052 Isolate Nodule
20 2842363717 Rhizobium leguminosarum SEMIA 4016 Isolate Nodule
21 2849660919 Nostoc sp. T09 Isolate Unclassified
22 2896384573 Ensifer sp. MPMI2T Isolate Unclassified
23 2921208531 Sinorhizobium meliloti USDA1660 Isolate Nodule
24 2945934425 Paraburkholderia graminis W1I13 Isolate Rhizosphere
25 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
26 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
27 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
28 3300003575 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_25 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
29 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
30 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
31 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
32 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
33 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
34 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
35 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
36 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
37 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
38 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
39 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
40 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
41 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
42 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
43 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
44 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
45 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
46 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
47 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
48 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
49 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
50 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
51 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
52 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
53 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
54 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
55 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
56 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
57 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
58 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
59 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
60 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
62 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
91 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
92 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
93 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
94 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
95 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
96 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
97 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
98 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
99 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
100 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
101 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
102 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
103 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
104 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
105 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
106 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
107 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
108 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
109 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
110 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
111 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
112 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
113 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
114 3300042123 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0117W_E14_082716_2228 Metagenome Rhizosphere
115 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
116 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
117 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
118 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
119 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
120 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
121 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
122 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
123 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
124 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
125 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
126 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
127 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
128 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
129 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
130 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
131 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
132 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
133 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
134 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
135 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
136 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
137 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
138 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
139 3300049673 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_A_3_drought Metagenome Rhizosphere
140 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
141 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
142 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
143 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
144 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
145 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
146 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
147 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
148 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
149 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
150 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
151 3300059477 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 50R_CW_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
152 3300059643 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 13R_AD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
153 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
154 641736151 Paraburkholderia graminis C4D1M Isolate Rhizoplane

Type Distribution

Type Percentage (%)
Metagenomes 88.93
Metatranscriptomes 1.19
Isolates 9.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.98
Nodule 2.77
Rhizoplane 3.56
Rhizosphere 84.58
Stem 0
Stem Tuber 0
Unclassified 7.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10016242 3300001979 Bacteria 2694
2 JGI24739J22299_10000469 3300001989 Bacteria 14200
3 JGI24735J21928_10000883 3300002067 Bacteria 10678
4 Ga0007409J51694_1041369 3300003575 Bacteria 2170
5 Ga0065714_10082045 3300005288 Bacteria 2334
6 Ga0070683_100103355 3300005329 Bacteria 2685
7 Ga0070677_10008144 3300005333 Bacteria 3520
8 Ga0070660_100099902 3300005339 Bacteria 2298
9 Ga0070668_100041185 3300005347 Bacteria 3539
10 Ga0070669_100008340 3300005353 Bacteria 7394
11 Ga0070669_100030105 3300005353 Bacteria 3915
12 Ga0070669_100124526 3300005353 Bacteria 1971
13 Ga0070675_100111054 3300005354 Bacteria 2319
14 Ga0070671_100056581 3300005355 Bacteria 3263
15 Ga0070708_100053210 3300005445 Bacteria 3591
16 Ga0070663_100050717 3300005455 Bacteria 2953
17 Ga0070662_100001829 3300005457 Bacteria 13044
18 Ga0068867_100016342 3300005459 Bacteria 5268
19 Ga0068867_100096672 3300005459 Bacteria 2249
20 Ga0070684_100035819 3300005535 Bacteria 4250
21 Ga0070672_100035166 3300005543 Bacteria 3807
22 Ga0070695_100091336 3300005545 Bacteria 2033
23 Ga0070704_100062703 3300005549 Bacteria 2665
24 Ga0068857_100083053 3300005577 Bacteria 2861
25 Ga0068859_100121768 3300005617 Bacteria 2676
26 Ga0068859_100183608 3300005617 Bacteria 2175
27 Ga0068866_10029866 3300005718 Bacteria 2611
28 Ga0068861_100007014 3300005719 Bacteria 7697
29 Ga0068858_100018476 3300005842 Bacteria 6526
30 Ga0068858_100069020 3300005842 Bacteria 3276
31 Ga0068860_100121734 3300005843 Bacteria 2499
32 Ga0068862_100030884 3300005844 Bacteria 4517
33 Ga0068862_100049511 3300005844 Bacteria 3589
34 Ga0081455_10007117 3300005937 Bacteria 11849
35 Ga0081455_10051140 3300005937 Bacteria 3546
36 Ga0081538_10002604 3300005981 Bacteria 17492
37 Ga0081538_10005435 3300005981 Bacteria 11440
38 Ga0081538_10045986 3300005981 Bacteria 2699
39 Ga0081540_1000561 3300005983 Bacteria 36032
40 Ga0081539_10015339 3300005985 Bacteria 5576
41 Ga0081539_10034643 3300005985 Bacteria 3048
42 Ga0075365_10102282 3300006038 Bacteria 1963
43 Ga0075428_100088526 3300006844 Bacteria 3377
44 Ga0075428_100099641 3300006844 Bacteria 3168
45 Ga0075428_100233551 3300006844 Bacteria 1984
46 Ga0075429_100104112 3300006880 Bacteria 2478
47 Ga0068865_100023305 3300006881 Bacteria 4052
48 Ga0097620_100121769 3300006931 Bacteria 2676
49 Ga0097620_100183602 3300006931 Bacteria 2175
50 Ga0105245_10035636 3300009098 Bacteria 4417
51 Ga0114129_10070541 3300009147 Bacteria 4873
52 Ga0114129_10083390 3300009147 Bacteria 4440
53 Ga0114129_10193102 3300009147 Bacteria 2763
54 Ga0105248_10330789 3300009177 Bacteria 1716
55 Ga0105249_10186066 3300009553 Bacteria 2024
56 Ga0157369_10012587 3300013105 Bacteria 9598
57 Ga0157380_10001976 3300014326 Bacteria 13656
58 Ga0157376_10034812 3300014969 Bacteria 4069
59 Ga0207682_10015008 3300025893 Bacteria 3017
60 Ga0207642_10116541 3300025899 Bacteria 1370
61 Ga0207710_10044076 3300025900 Bacteria 1986
62 Ga0207647_10020674 3300025904 Bacteria 4410
63 Ga0207645_10021287 3300025907 Bacteria 4230
64 Ga0207681_10002560 3300025923 Bacteria 11545
65 Ga0207650_10057818 3300025925 Bacteria 2886
66 Ga0207659_10007040 3300025926 Bacteria 6905
67 Ga0207687_10131628 3300025927 Bacteria 1886
68 Ga0207644_10034627 3300025931 Bacteria 3535
69 Ga0207706_10033119 3300025933 Bacteria 4600
70 Ga0207706_10196173 3300025933 Bacteria 1771
71 Ga0207704_10046211 3300025938 Bacteria 2593
72 Ga0207691_10000707 3300025940 Bacteria 33055
73 Ga0207691_10011519 3300025940 Bacteria 8487
74 Ga0207679_10057146 3300025945 Bacteria 2884
75 Ga0207703_10023179 3300026035 Bacteria 4875
76 Ga0207703_10052638 3300026035 Bacteria 3307
77 Ga0207708_10068301 3300026075 Bacteria 2720
78 Ga0207648_10009616 3300026089 Bacteria 9246
79 Ga0207648_10018651 3300026089 Bacteria 6279
80 Ga0207648_10046692 3300026089 Bacteria 3797
81 Ga0207676_10019322 3300026095 Bacteria 4968
82 Ga0207676_10071868 3300026095 Bacteria 2779
83 Ga0207674_10072231 3300026116 Bacteria 3466
84 Ga0207675_100016225 3300026118 Bacteria 6952
85 Ga0207675_100042199 3300026118 Bacteria 4258
86 Ga0207683_10342761 3300026121 Bacteria 1371
87 Ga0268264_10129180 3300028381 Bacteria 2237
88 Ga0265338_10013702 3300028800 Bacteria 9122
89 Ga0307513_10002617 3300031456 Bacteria 24837
90 Ga0307408_100016326 3300031548 Bacteria 4953
91 Ga0307408_100031128 3300031548 Bacteria 3712
92 Ga0307408_100031645 3300031548 Bacteria 3685
93 Ga0307408_100034255 3300031548 Bacteria 3555
94 Ga0307408_100047621 3300031548 Bacteria 3071
95 Ga0307408_100128170 3300031548 Bacteria 1976
96 Ga0307405_10017818 3300031731 Bacteria 3904
97 Ga0307405_10019966 3300031731 Bacteria 3734
98 Ga0307405_10054324 3300031731 Bacteria 2500
99 Ga0307405_10062865 3300031731 Bacteria 2352
100 Ga0307405_10093971 3300031731 Bacteria 1993
101 Ga0307405_10111536 3300031731 Bacteria 1854
102 Ga0307413_10005446 3300031824 Bacteria 5685
103 Ga0307413_10012836 3300031824 Bacteria 4184
104 Ga0307413_10014635 3300031824 Bacteria 3993
105 Ga0307413_10038056 3300031824 Bacteria 2785
106 Ga0307413_10046843 3300031824 Bacteria 2574
107 Ga0307410_10000446 3300031852 Bacteria 16584
108 Ga0307410_10012146 3300031852 Bacteria 4963
109 Ga0307410_10021154 3300031852 Bacteria 3997
110 Ga0307410_10032971 3300031852 Bacteria 3340
111 Ga0307410_10049846 3300031852 Bacteria 2812
112 Ga0307410_10051103 3300031852 Bacteria 2784
113 Ga0307410_10179677 3300031852 Bacteria 1601
114 Ga0307406_10016529 3300031901 Bacteria 4290
115 Ga0307406_10031049 3300031901 Bacteria 3250
116 Ga0307407_10001157 3300031903 Bacteria 9261
117 Ga0307407_10013537 3300031903 Bacteria 3964
118 Ga0307407_10018062 3300031903 Bacteria 3556
119 Ga0307407_10032279 3300031903 Bacteria 2845
120 Ga0307407_10032470 3300031903 Bacteria 2838
121 Ga0307407_10051813 3300031903 Bacteria 2354
122 Ga0307407_10100456 3300031903 Bacteria 1794
123 Ga0307407_10124555 3300031903 Bacteria 1639
124 Ga0307412_10000059 3300031911 Bacteria 138772
125 Ga0307412_10020480 3300031911 Bacteria 4026
126 Ga0307412_10039379 3300031911 Bacteria 3051
127 Ga0307412_10142107 3300031911 Bacteria 1759
128 Ga0307409_100002437 3300031995 Bacteria 9719
129 Ga0307409_100004149 3300031995 Bacteria 8063
130 Ga0307409_100006279 3300031995 Bacteria 6962
131 Ga0307409_100010314 3300031995 Bacteria 5800
132 Ga0307409_100038854 3300031995 Bacteria 3525
133 Ga0307409_100057118 3300031995 Bacteria 3022
134 Ga0307409_100064233 3300031995 Bacteria 2882
135 Ga0307409_100086139 3300031995 Bacteria 2556
136 Ga0307409_100124984 3300031995 Bacteria 2186
137 Ga0307409_100179131 3300031995 Bacteria 1874
138 Ga0307416_100001713 3300032002 Bacteria 12134
139 Ga0307416_100021444 3300032002 Bacteria 4638
140 Ga0307416_100031979 3300032002 Bacteria 3969
141 Ga0307416_100043533 3300032002 Bacteria 3516
142 Ga0307416_100046006 3300032002 Bacteria 3441
143 Ga0307416_100056512 3300032002 Bacteria 3168
144 Ga0307416_100070755 3300032002 Bacteria 2894
145 Ga0307416_100098257 3300032002 Bacteria 2539
146 Ga0307416_100132899 3300032002 Bacteria 2244
147 Ga0307416_100230688 3300032002 Bacteria 1784
148 Ga0307416_100316900 3300032002 Bacteria 1559
149 Ga0307414_10083536 3300032004 Bacteria 2345
150 Ga0307414_10093572 3300032004 Bacteria 2241
151 Ga0307414_10129398 3300032004 Bacteria 1957
152 Ga0307411_10005785 3300032005 Bacteria 6119
153 Ga0307411_10025147 3300032005 Bacteria 3562
154 Ga0307411_10032561 3300032005 Bacteria 3223
155 Ga0307411_10072842 3300032005 Bacteria 2334
156 Ga0307411_10076942 3300032005 Bacteria 2282
157 Ga0307415_100000025 3300032126 Bacteria 62892
158 Ga0307415_100000950 3300032126 Bacteria 13334
159 Ga0307415_100008214 3300032126 Bacteria 5775
160 Ga0307415_100009085 3300032126 Bacteria 5551
161 Ga0307415_100020671 3300032126 Bacteria 4025
162 Ga0307415_100026068 3300032126 Bacteria 3680
163 Ga0307415_100027601 3300032126 Bacteria 3599
164 Ga0307415_100044434 3300032126 Bacteria 2970
165 Ga0307415_100065586 3300032126 Bacteria 2530
166 Ga0307415_100093822 3300032126 Bacteria 2180
167 Ga0307415_100119739 3300032126 Bacteria 1971
168 Ga0395900_0034937 3300037418 Bacteria 5178
169 Ga0395900_0144993 3300037418 Bacteria 2428
170 Ga0395898_0318694 3300037466 Bacteria 1483
171 Ga0395905_0111187 3300037471 Bacteria 2573
172 Ga0395905_0278616 3300037471 Bacteria 1558
173 Ga0395901_0007760 3300038443 Bacteria 10826
174 Ga0395901_0017343 3300038443 Bacteria 7350
175 Ga0395901_0134402 3300038443 Bacteria 2599
176 Ga0395901_0185895 3300038443 Bacteria 2179
177 Ga0395901_0257370 3300038443 Bacteria 1817
178 Ga0436363_0903111 3300039450 Bacteria 2494
179 Ga0439453_0006868 3300041408 Bacteria 1787
180 Ga0439466_0027755 3300041411 Bacteria 1959
181 Ga0451843_0752188 3300041509 Bacteria 2393
182 Ga0439455_0011826 3300042012 Bacteria 1948
183 Ga0439462_0023340 3300042015 Bacteria 1621
184 Ga0450921_000915 3300042123 Bacteria 1616
185 Ga0439458_0017521 3300042157 Bacteria 1637
186 Ga0439435_0035038 3300042436 Bacteria 1382
187 Ga0466960_0025817 3300044901 Bacteria 2662
188 Ga0495592_0015569 3300046454 Bacteria 5770
189 Ga0495651_0040974 3300046462 Bacteria 3598
190 Ga0495584_0009247 3300046491 Bacteria 5081
191 Ga0495596_0015201 3300046500 Bacteria 3229
192 Ga0495607_0092546 3300046501 Bacteria 1635
193 Ga0495606_0090690 3300046507 Bacteria 1880
194 Ga0495610_0000246 3300046512 Bacteria 56850
195 Ga0495642_0019698 3300046528 Bacteria 2646
196 Ga0495625_0000287 3300046660 Bacteria 78023
197 Ga0495588_0046475 3300046674 Bacteria 2227
198 Ga0495657_0069719 3300046675 Bacteria 2300
199 Ga0495676_0165061 3300047321 Bacteria 1563
200 Ga0495687_006666 3300047443 Bacteria 7013
201 Ga0496104_0037345 3300048907 Bacteria 4543
202 Ga0496105_0062452 3300048908 Bacteria 3074
203 Ga0496106_0082860 3300048909 Bacteria 2466
204 Ga0496111_0007301 3300048914 Bacteria 7232
205 Ga0496112_0004845 3300048915 Bacteria 11494
206 Ga0496112_0087185 3300048915 Bacteria 3089
207 Ga0496113_0014256 3300048916 Bacteria 5418
208 Ga0496118_0005967 3300048921 Bacteria 13588
209 Ga0501299_001060 3300049522 Bacteria 3417
210 Ga0501240_000138 3300049673 Bacteria 4897
211 Ga0501249_002791 3300049679 Bacteria 3517
212 nmdc:mga0yw44_52609_c1 3300050492 Bacteria 2469
213 nmdc:mga05p37_1312_c1 3300050507 Bacteria 28936
214 nmdc:mga05p37_162576_c1 3300050507 Bacteria 2726
215 nmdc:mga05p37_6617_c1 3300050507 Bacteria 13661
216 nmdc:mga09592_363922_c1 3300050508 Bacteria 1251
217 nmdc:mga0qj67_11102_c1 3300050509 Bacteria 6745
218 nmdc:mga0qj67_977_c1 3300050509 Bacteria 19682
219 nmdc:mga06r32_259_c2 3300050510 Bacteria 43373
220 nmdc:mga06r32_44255_c1 3300050510 Bacteria 4239
221 Ga0500643_000755 3300053087 Bacteria 21096
222 Ga0500611_000012 3300053727 Bacteria 137782
223 Ga0500645_001376 3300053730 Bacteria 12466
224 Ga0590071_005049 3300059421 Bacteria 3186
225 Ga0590074_010549 3300059423 Bacteria 1544
226 Ga0587084_006599 3300059477 Bacteria 1415
227 Ga0587072_003853 3300059643 Bacteria 2138
228 Ga0530510_0018633 3300061734 Bacteria 4921

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300061734 Ga0530510_0018633 Ga0530510_0018633_3410_4633 339
2 3300025933 Ga0207706_10196173 Ga0207706_101961732 340
3 3300026121 Ga0207683_10342761 Ga0207683_103427612 342
4 3300050508 nmdc:mga09592_363922_c1 nmdc:mga09592_363922_c1_64_1236 343
5 3300005983 Ga0081540_1000561 Ga0081540_10005614 346
6 3300050507 nmdc:mga05p37_162576_c1 nmdc:mga05p37_162576_c1_756_1970 348
7 3300049673 Ga0501240_000138 Ga0501240_000138_3495_4679 350
8 3300006844 Ga0075428_100088526 Ga0075428_1000885261 351
9 3300005445 Ga0070708_100053210 Ga0070708_1000532102 354
10 3300006844 Ga0075428_100233551 Ga0075428_1002335512 354
11 3300009147 Ga0114129_10193102 Ga0114129_101931022 354
12 3300046454 Ga0495592_0015569 Ga0495592_0015569_222_1415 354
13 3300046462 Ga0495651_0040974 Ga0495651_0040974_1929_3122 354
14 3300046675 Ga0495657_0069719 Ga0495657_0069719_789_1982 354
15 3300031456 Ga0307513_10002617 Ga0307513_100026177 355
16 3300032002 Ga0307416_100043533 Ga0307416_1000435332 355
17 3300037418 Ga0395900_0034937 Ga0395900_0034937_1227_2417 355
18 3300005333 Ga0070677_10008144 Ga0070677_100081442 356
19 3300005353 Ga0070669_100008340 Ga0070669_1000083401 356
20 3300005353 Ga0070669_100124526 Ga0070669_1001245262 356
21 3300005459 Ga0068867_100016342 Ga0068867_1000163425 356
22 3300005543 Ga0070672_100035166 Ga0070672_1000351664 356
23 3300005545 Ga0070695_100091336 Ga0070695_1000913362 356
24 3300005549 Ga0070704_100062703 Ga0070704_1000627032 356
25 3300005718 Ga0068866_10029866 Ga0068866_100298662 356
26 3300005719 Ga0068861_100007014 Ga0068861_1000070143 356
27 3300006881 Ga0068865_100023305 Ga0068865_1000233053 356
28 3300014326 Ga0157380_10001976 Ga0157380_1000197611 356
29 3300025893 Ga0207682_10015008 Ga0207682_100150083 356
30 3300025899 Ga0207642_10116541 Ga0207642_101165411 356
31 3300025907 Ga0207645_10021287 Ga0207645_100212873 356
32 3300025923 Ga0207681_10002560 Ga0207681_100025608 356
33 3300025933 Ga0207706_10033119 Ga0207706_100331193 356
34 3300025938 Ga0207704_10046211 Ga0207704_100462112 356
35 3300025940 Ga0207691_10011519 Ga0207691_100115195 356
36 3300026075 Ga0207708_10068301 Ga0207708_100683012 356
37 3300026089 Ga0207648_10009616 Ga0207648_100096166 356
38 3300026118 Ga0207675_100016225 Ga0207675_1000162253 356
39 3300026118 Ga0207675_100042199 Ga0207675_1000421992 356
40 3300037418 Ga0395900_0144993 Ga0395900_0144993_511_1710 356
41 3300038443 Ga0395901_0257370 Ga0395901_0257370_25_1224 356
42 iso_pu_bacteria 2622736605 2623501358 357
43 3300006038 Ga0075365_10102282 Ga0075365_101022822 358
44 3300006844 Ga0075428_100099641 Ga0075428_1000996412 358
45 3300009147 Ga0114129_10070541 Ga0114129_100705413 358
46 3300031731 Ga0307405_10111536 Ga0307405_101115361 358
47 3300031824 Ga0307413_10038056 Ga0307413_100380564 358
48 3300031903 Ga0307407_10124555 Ga0307407_101245551 358
49 3300031995 Ga0307409_100124984 Ga0307409_1001249842 358
50 3300032002 Ga0307416_100056512 Ga0307416_1000565123 358
51 3300032005 Ga0307411_10032561 Ga0307411_100325613 358
52 3300032126 Ga0307415_100027601 Ga0307415_1000276014 358
53 3300050492 nmdc:mga0yw44_52609_c1 nmdc:mga0yw44_52609_c1_861_2066 358
54 3300050507 nmdc:mga05p37_1312_c1 nmdc:mga05p37_1312_c1_27037_28245 358
55 3300059477 Ga0587084_006599 Ga0587084_006599_128_1333 358
56 3300059643 Ga0587072_003853 Ga0587072_003853_439_1644 358
57 3300031548 Ga0307408_100016326 Ga0307408_1000163263 359
58 3300032002 Ga0307416_100132899 Ga0307416_1001328992 359
59 3300009177 Ga0105248_10330789 Ga0105248_103307892 360
60 3300031548 Ga0307408_100031128 Ga0307408_1000311282 360
61 3300031824 Ga0307413_10046843 Ga0307413_100468432 360
62 3300031852 Ga0307410_10032971 Ga0307410_100329712 360
63 3300031911 Ga0307412_10039379 Ga0307412_100393792 360
64 3300032002 Ga0307416_100001713 Ga0307416_1000017131 360
65 3300032004 Ga0307414_10093572 Ga0307414_100935721 360
66 3300032126 Ga0307415_100020671 Ga0307415_1000206713 360
67 3300048908 Ga0496105_0062452 Ga0496105_0062452_1379_2596 360
68 3300048909 Ga0496106_0082860 Ga0496106_0082860_775_1992 360
69 3300048914 Ga0496111_0007301 Ga0496111_0007301_4723_5940 360
70 3300048915 Ga0496112_0004845 Ga0496112_0004845_624_1841 360
71 3300048916 Ga0496113_0014256 Ga0496113_0014256_3786_5003 360
72 3300005842 Ga0068858_100018476 Ga0068858_1000184763 361
73 3300005843 Ga0068860_100121734 Ga0068860_1001217342 361
74 3300005844 Ga0068862_100049511 Ga0068862_1000495115 361
75 3300005981 Ga0081538_10005435 Ga0081538_100054351 361
76 3300026035 Ga0207703_10023179 Ga0207703_100231793 361
77 3300028800 Ga0265338_10013702 Ga0265338_1001370213 361
78 3300042436 Ga0439435_0035038 Ga0439435_0035038_14_1258 361
79 3300003575 Ga0007409J51694_1041369 Ga0007409J51694_10413692 362
80 3300005937 Ga0081455_10007117 Ga0081455_100071176 362
81 3300005985 Ga0081539_10034643 Ga0081539_100346432 362
82 3300006880 Ga0075429_100104112 Ga0075429_1001041122 362
83 3300031731 Ga0307405_10054324 Ga0307405_100543242 362
84 3300031731 Ga0307405_10093971 Ga0307405_100939712 362
85 3300031824 Ga0307413_10005446 Ga0307413_100054462 362
86 3300031852 Ga0307410_10021154 Ga0307410_100211544 362
87 3300031852 Ga0307410_10051103 Ga0307410_100511031 362
88 3300031852 Ga0307410_10179677 Ga0307410_101796772 362
89 3300031901 Ga0307406_10031049 Ga0307406_100310493 362
90 3300031903 Ga0307407_10032279 Ga0307407_100322794 362
91 3300031903 Ga0307407_10032470 Ga0307407_100324702 362
92 3300031903 Ga0307407_10100456 Ga0307407_101004561 362
93 3300031995 Ga0307409_100002437 Ga0307409_1000024377 362
94 3300031995 Ga0307409_100004149 Ga0307409_1000041499 362
95 3300031995 Ga0307409_100010314 Ga0307409_1000103144 362
96 3300031995 Ga0307409_100038854 Ga0307409_1000388543 362
97 3300032002 Ga0307416_100021444 Ga0307416_1000214441 362
98 3300032002 Ga0307416_100070755 Ga0307416_1000707552 362
99 3300032002 Ga0307416_100098257 Ga0307416_1000982573 362
100 3300032002 Ga0307416_100230688 Ga0307416_1002306881 362
101 3300032002 Ga0307416_100316900 Ga0307416_1003169002 362
102 3300032005 Ga0307411_10076942 Ga0307411_100769422 362
103 3300032126 Ga0307415_100000025 Ga0307415_10000002547 362
104 3300032126 Ga0307415_100009085 Ga0307415_1000090852 362
105 3300032126 Ga0307415_100093822 Ga0307415_1000938221 362
106 3300032126 Ga0307415_100119739 Ga0307415_1001197392 362
107 3300037466 Ga0395898_0318694 Ga0395898_0318694_71_1282 362
108 3300038443 Ga0395901_0017343 Ga0395901_0017343_1584_2795 362
109 3300038443 Ga0395901_0134402 Ga0395901_0134402_1015_2226 362
110 3300038443 Ga0395901_0185895 Ga0395901_0185895_510_1721 362
111 3300042012 Ga0439455_0011826 Ga0439455_0011826_118_1344 362
112 3300042157 Ga0439458_0017521 Ga0439458_0017521_60_1274 362
113 3300046501 Ga0495607_0092546 Ga0495607_0092546_316_1536 362
114 3300031995 Ga0307409_100057118 Ga0307409_1000571182 363
115 3300031995 Ga0307409_100086139 Ga0307409_1000861392 363
116 3300032004 Ga0307414_10129398 Ga0307414_101293982 363
117 3300032005 Ga0307411_10072842 Ga0307411_100728422 363
118 3300032126 Ga0307415_100044434 Ga0307415_1000444342 363
119 3300041408 Ga0439453_0006868 Ga0439453_0006868_464_1768 363
120 3300042015 Ga0439462_0023340 Ga0439462_0023340_130_1500 363
121 3300044901 Ga0466960_0025817 Ga0466960_0025817_1410_2651 363
122 3300046674 Ga0495588_0046475 Ga0495588_0046475_903_2117 363
123 3300005981 Ga0081538_10045986 Ga0081538_100459861 364
124 3300005981 Ga0081538_10002604 Ga0081538_100026049 365
125 3300005985 Ga0081539_10015339 Ga0081539_100153394 365
126 3300031995 Ga0307409_100179131 Ga0307409_1001791311 367
127 3300053730 Ga0500645_001376 Ga0500645_001376_9670_10989 367
128 3300005937 Ga0081455_10051140 Ga0081455_100511401 368
129 3300005617 Ga0068859_100183608 Ga0068859_1001836082 369
130 3300005842 Ga0068858_100069020 Ga0068858_1000690203 369
131 3300006931 Ga0097620_100183602 Ga0097620_1001836022 369
132 3300026035 Ga0207703_10052638 Ga0207703_100526383 369
133 3300032002 Ga0307416_100046006 Ga0307416_1000460063 369
134 iso_pu_bacteria 2840764183 2840768683 369
135 3300026095 Ga0207676_10071868 Ga0207676_100718682 372
136 iso_pu_bacteria 2839993093 2839996737 372
137 3300037471 Ga0395905_0111187 Ga0395905_0111187_423_1700 373
138 3300037471 Ga0395905_0278616 Ga0395905_0278616_41_1297 373
139 3300038443 Ga0395901_0007760 Ga0395901_0007760_4699_5955 373
140 3300053087 Ga0500643_000755 Ga0500643_000755_18917_20185 373
141 3300005353 Ga0070669_100030105 Ga0070669_1000301054 375
142 3300005535 Ga0070684_100035819 Ga0070684_1000358191 375
143 3300041411 Ga0439466_0027755 Ga0439466_0027755_314_1633 375
144 3300009147 Ga0114129_10083390 Ga0114129_100833903 376
145 3300031548 Ga0307408_100034255 Ga0307408_1000342552 376
146 3300031548 Ga0307408_100047621 Ga0307408_1000476211 376
147 3300031548 Ga0307408_100128170 Ga0307408_1001281702 376
148 3300031731 Ga0307405_10017818 Ga0307405_100178183 376
149 3300031731 Ga0307405_10062865 Ga0307405_100628652 376
150 3300031824 Ga0307413_10012836 Ga0307413_100128362 376
151 3300031852 Ga0307410_10012146 Ga0307410_100121463 376
152 3300031852 Ga0307410_10049846 Ga0307410_100498461 376
153 3300031901 Ga0307406_10016529 Ga0307406_100165293 376
154 3300031903 Ga0307407_10013537 Ga0307407_100135373 376
155 3300031903 Ga0307407_10018062 Ga0307407_100180622 376
156 3300031903 Ga0307407_10051813 Ga0307407_100518131 376
157 3300031911 Ga0307412_10020480 Ga0307412_100204802 376
158 3300031911 Ga0307412_10142107 Ga0307412_101421072 376
159 3300031995 Ga0307409_100064233 Ga0307409_1000642332 376
160 3300032002 Ga0307416_100031979 Ga0307416_1000319793 376
161 3300032004 Ga0307414_10083536 Ga0307414_100835362 376
162 3300032005 Ga0307411_10025147 Ga0307411_100251473 376
163 3300032126 Ga0307415_100008214 Ga0307415_1000082143 376
164 3300032126 Ga0307415_100026068 Ga0307415_1000260682 376
165 3300032126 Ga0307415_100065586 Ga0307415_1000655862 376
166 3300050507 nmdc:mga05p37_6617_c1 nmdc:mga05p37_6617_c1_6982_8295 376
167 3300050509 nmdc:mga0qj67_11102_c1 nmdc:mga0qj67_11102_c1_5372_6685 376
168 3300050510 nmdc:mga06r32_44255_c1 nmdc:mga06r32_44255_c1_2026_3339 376
169 iso_pu_bacteria 2508501050 2508731069 376
170 iso_pu_bacteria 2773857925 2774874490 376
171 iso_pu_bacteria 2775506901 2776263560 376
172 3300005347 Ga0070668_100041185 Ga0070668_1000411851 377
173 3300005459 Ga0068867_100096672 Ga0068867_1000966721 377
174 3300026089 Ga0207648_10046692 Ga0207648_100466922 377
175 3300005457 Ga0070662_100001829 Ga0070662_1000018295 378
176 3300048907 Ga0496104_0037345 Ga0496104_0037345_2711_4108 378
177 3300039450 Ga0436363_0903111 Ga0436363_0903111_1134_2477 379
178 3300005329 Ga0070683_100103355 Ga0070683_1001033551 380
179 3300005354 Ga0070675_100111054 Ga0070675_1001110543 380
180 3300014969 Ga0157376_10034812 Ga0157376_100348121 380
181 3300025926 Ga0207659_10007040 Ga0207659_100070403 380
182 3300025940 Ga0207691_10000707 Ga0207691_1000070722 380
183 3300025945 Ga0207679_10057146 Ga0207679_100571462 380
184 3300026089 Ga0207648_10018651 Ga0207648_100186515 380
185 3300005288 Ga0065714_10082045 Ga0065714_100820452 381
186 3300028381 Ga0268264_10129180 Ga0268264_101291803 382
187 3300049522 Ga0501299_001060 Ga0501299_001060_805_2163 382
188 3300049679 Ga0501249_002791 Ga0501249_002791_884_2242 382
189 3300005455 Ga0070663_100050717 Ga0070663_1000507172 383
190 3300031548 Ga0307408_100031645 Ga0307408_1000316452 383
191 iso_pu_bacteria 2599185352 2600196741 383
192 3300031731 Ga0307405_10019966 Ga0307405_100199662 384
193 3300031824 Ga0307413_10014635 Ga0307413_100146352 384
194 3300031852 Ga0307410_10000446 Ga0307410_1000044611 384
195 3300031903 Ga0307407_10001157 Ga0307407_100011575 384
196 3300031995 Ga0307409_100006279 Ga0307409_1000062792 384
197 3300032005 Ga0307411_10005785 Ga0307411_100057852 384
198 3300032126 Ga0307415_100000950 Ga0307415_1000009502 384
199 3300005577 Ga0068857_100083053 Ga0068857_1000830532 385
200 3300005617 Ga0068859_100121768 Ga0068859_1001217683 385
201 3300006931 Ga0097620_100121769 Ga0097620_1001217693 385
202 3300009098 Ga0105245_10035636 Ga0105245_100356362 385
203 3300009553 Ga0105249_10186066 Ga0105249_101860661 385
204 3300025900 Ga0207710_10044076 Ga0207710_100440762 385
205 3300025927 Ga0207687_10131628 Ga0207687_101316282 385
206 3300026095 Ga0207676_10019322 Ga0207676_100193221 385
207 3300026116 Ga0207674_10072231 Ga0207674_100722312 385
208 iso_pu_bacteria 2513237143 2513904750 385
209 iso_pu_bacteria 2921208531 2921214826 385
210 3300046491 Ga0495584_0009247 Ga0495584_0009247_2164_3507 386
211 3300046660 Ga0495625_0000287 Ga0495625_0000287_111_1418 386
212 3300047321 Ga0495676_0165061 Ga0495676_0165061_101_1384 386
213 3300053727 Ga0500611_000012 Ga0500611_000012_81158_82456 386
214 iso_pu_bacteria 2744054900 2746089002 386
215 iso_pu_bacteria 2744054901 2746095475 386
216 iso_pu_bacteria 2509276021 2509390409 387
217 iso_pu_bacteria 2841864319 2841866263 387
218 iso_pu_bacteria 2842363717 2842365876 387
219 iso_pu_bacteria 2896384573 2896390559 387
220 3300025925 Ga0207650_10057818 Ga0207650_100578183 388
221 3300041509 Ga0451843_0752188 Ga0451843_0752188_381_1712 389
222 3300059421 Ga0590071_005049 Ga0590071_005049_706_2040 389
223 3300059423 Ga0590074_010549 Ga0590074_010549_159_1493 389
224 iso_pu_bacteria 2849660919 2849665967 390
225 3300042123 Ga0450921_000915 Ga0450921_000915_35_1372 391
226 3300048915 Ga0496112_0087185 Ga0496112_0087185_898_2217 391
227 iso_pu_bacteria 2509276033 2509444255 391
228 3300050509 nmdc:mga0qj67_977_c1 nmdc:mga0qj67_977_c1_3325_4767 392
229 3300050510 nmdc:mga06r32_259_c2 nmdc:mga06r32_259_c2_19_1461 392
230 3300005844 Ga0068862_100030884 Ga0068862_1000308842 396
231 3300005355 Ga0070671_100056581 Ga0070671_1000565812 401
232 3300025931 Ga0207644_10034627 Ga0207644_100346272 401
233 iso_pu_bacteria 2515154189 2516024237 402
234 iso_pu_bacteria 2738541296 2738821158 403
235 iso_pu_bacteria 2738541298 2738833640 403
236 iso_pu_bacteria 2738541306 2738877047 403
237 iso_pu_bacteria 2738543002 2739186796 403
238 iso_pu_bacteria 2738543008 2739223640 403
239 iso_pu_bacteria 2945934425 2945939453 403
240 iso_pu_bacteria 641736151 642424716 403
241 3300001979 JGI24740J21852_10016242 JGI24740J21852_100162422 407
242 3300001989 JGI24739J22299_10000469 JGI24739J22299_1000046913 407
243 3300002067 JGI24735J21928_10000883 JGI24735J21928_100008831 407
244 3300005339 Ga0070660_100099902 Ga0070660_1000999021 407
245 3300013105 Ga0157369_10012587 Ga0157369_100125877 407
246 3300025904 Ga0207647_10020674 Ga0207647_100206741 407
247 3300031911 Ga0307412_10000059 Ga0307412_10000059133 407
248 3300046500 Ga0495596_0015201 Ga0495596_0015201_602_1948 407
249 3300046507 Ga0495606_0090690 Ga0495606_0090690_361_1707 407
250 3300046512 Ga0495610_0000246 Ga0495610_0000246_23496_24842 407
251 3300046528 Ga0495642_0019698 Ga0495642_0019698_241_1587 407
252 3300047443 Ga0495687_006666 Ga0495687_006666_4989_6335 407
253 3300048921 Ga0496118_0005967 Ga0496118_0005967_1429_2775 407

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06441

EHN

Epoxide hydrolase N terminus

88

193

0.97

PF00561

Abhydrolase_1

alpha/beta hydrolase fold

179

336

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
8b6q-assembly1.cif.gz_A x-ray structure of the haloalkane dehalogenase halotag7 with an insertion of calmodulin-m13 fusion at position 154-156 that mimic the structure of caprola, an calcium gated protein labeling technology 0.8467 121 252
4qa9-assembly1.cif.gz_A ensemble refinement of an epoxide hydrolase from streptomyces carzinostaticus subsp. neocarzinostaticus. 0.828 55 405
5f4z-assembly3.cif.gz_E the crystal structure of an epoxide hydrolase from streptomyces carzinostaticus subsp. neocarzinostaticus 0.8211 56 406
4qla-assembly1.cif.gz_A crystal structure of juvenile hormone epoxide hydrolase from the silkworm bombyx mori 0.8182 51 405
4qla-assembly1.cif.gz_B crystal structure of juvenile hormone epoxide hydrolase from the silkworm bombyx mori 0.8015 51 406
ID Description Score Start End Superfamily
af_Q9D379_48_454_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8418 56 405 3.40.50.1820
af_Q23068_49_452_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8377 56 406 3.40.50.1820
4qa9A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.828 55 405 3.40.50.1820
4qlaA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8182 51 405 3.40.50.1820
af_Q7JRC3_35_470_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8123 55 405 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A536YXA6-F1-model_v4 Epoxide hydrolase 1 0.9405 55 228 GO:0004301
GO:0009056
GO:0097176
AF-A0A821NGR9-F1-model_v4 Epoxide hydrolase N-terminal domain-containing protein 0.9385 104 272 GO:0004301
GO:0009056
GO:0097176
AF-A0A2V8E0N0-F1-model_v4 Epoxide hydrolase N-terminal domain-containing protein 0.938 119 270 GO:0004301
GO:0009056
GO:0097176
AF-A0A381ZZR1-F1-model_v4 Epoxide hydrolase N-terminal domain-containing protein 0.9377 55 251 GO:0004301
GO:0009056
GO:0097176
AF-A0A226NLK2-F1-model_v4 AB hydrolase-1 domain-containing protein 0.9299 132 244 GO:0004301
GO:0097176

Feature Viewer

pLDDT pTM Quality
78.84 0.79 High
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Predicted Structure (AlphaFold2)

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